Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRNT1_chr3_3121940_3154023	3149881	T T	TATCATAC others(9): Show TATCATACAAATGTGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp2 HG03704.hp1 HG03654.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	2	400	0.0050	16	c.17 others(27): Show c.1727_*1728insATCATACAAATGTGGA	TRNT1	ENSG00000072756.18	transcript	ENST00000251607.11	protein_coding		859		chr3	TogoVar
TRPA1_chr8_72016250_72080584	72052965	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03688.hp2 NA18985.hp1 others(1): Show HG02809.hp1 HG03688.hp2 NA18985.hp1 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0102 a0001c0001t0001g0126 others(1): Show a0001c0001t0001g0067 a0001c0001t0001g0102 a0001c0001t0001g0126 a0001c0001t0001g0143	4	230	0.0174	16	c.164 others(33): Show c.1645-216_1645-201dupCACACACACACACACA	TRPA1	ENSG00000104321.11	transcript	ENST00000262209.5	protein_coding	13/26			chr8	TogoVar
TRPC1_chr3_142719034_142812888	142737330	A A	ATATGTAT others(9): Show ATATGTATGTATGTATG	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0230 a0001c0002t0001g0230	1	222	0.0045	16	c.327 others(31): Show c.327+800_327+801insGTATGTATGTATGTAT	TRPC1	ENSG00000144935.17	transcript	ENST00000476941.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRPC1_chr3_142719034_142812888	142763959	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00642.hp2 HG00673.hp1 others(5): Show HG00438.hp2 HG00642.hp2 HG00673.hp1 NA18992.hp1 NA18999.hp1 NA19003.hp1 NA19056.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0001g0078 a0001c0001t0001g0079 others(2): Show a0001c0001t0001g0003 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0105 a0001c0001t0002g0150	8	213	0.0376	16	c.633 others(35): Show c.633-13663_633-13648dupTATATATATATATATA	TRPC1	ENSG00000144935.17	transcript	ENST00000476941.6	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRPC4AP_chr20_34997404_35097807	35024854	A A	AAAAAAAA others(9): Show AAAAAAAAAAAAAACAT	intron_variant intron_variant	MODIFIER	HG02738.hp2 NA18990.hp1 HG02738.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0206 a0001c0001t0002g0207	2	99	0.0202	16	c.105 others(35): Show c.1052-3499_1052-3498insATGTTTTTTTTTTTTT	TRPC4AP	ENSG00000100991.12	transcript	ENST00000252015.3	protein_coding	8/18			chr20	TogoVar
TRPC4_chr13_37627063_37874772	37639744	C C	CATATATA others(9): Show CATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03225.hp2 HG02559.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0051 a0001c0001t0028 a0001c0001t0051	a0001c0001t0028g0002 a0001c0001t0051g0249 a0001c0001t0028g0002 a0001c0001t0051g0249	2	118	0.0169	16	c.208 others(33): Show c.2080-461_2080-446dupATATATATATATATAT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	8/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37650612	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01496.hp2 HG02602.hp2 others(11): Show HG00099.hp2 HG01496.hp2 HG02602.hp2 HG02738.hp1 HG02886.hp2 HG03486.hp1 HG03654.hp1 HG04204.hp1 NA18945.hp1 NA18949.hp2 NA18975.hp2 NA18992.hp1 NA18995.hp1 NA19056.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0003 a0006c0008 a0001c0001 a0001c0003 a0006c0008	a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 others(4): Show a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 a0001c0001t0026 a0001c0001t0033 a0001c0003t0015 a0006c0008t0013	a0001c0001t0002g0091 a0001c0001t0002g0156 a0001c0001t0013g0080 others(11): Show a0001c0001t0002g0091 a0001c0001t0002g0156 a0001c0001t0013g0080 a0001c0001t0013g0115 a0001c0001t0013g0140 a0001c0001t0013g0154 a0001c0001t0013g0164 a0001c0001t0014g0110 a0001c0001t0014g0143 a0001c0001t0014g0180 a0001c0001t0026g0284 a0001c0001t0033g0103 a0001c0003t0015g0175 a0006c0008t0013g0065	14	29	0.4828	16	c.207 others(33): Show c.2079+637_2079+652dupGTGTGTGTGTGTGTGT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	8/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37698167	C C	CTTTTTTT others(9): Show CTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG06807.hp1 NA19007.hp1 NA19007.hp2 HG06807.hp1 NA19007.hp1 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008	a0001c0001t0006g0224 a0001c0001t0007g0090 a0001c0001t0008g0229 a0001c0001t0006g0224 a0001c0001t0007g0090 a0001c0001t0008g0229	3	8	0.3750	16	c.898 others(33): Show c.898-5833_898-5832insAAAAAAAAAAAAAAAA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	3/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37745448	A A	ATATATAT others(9): Show ATATATATATATATGCG	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA19011.hp1 NA18949.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0010 a0001c0001t0008 a0001c0001t0010	a0001c0001t0008g0141 a0001c0001t0010g0138 a0001c0001t0008g0141 a0001c0001t0010g0138	2	284	0.0070	16	c.897 others(31): Show c.897+488_897+489insCGCATATATATATATA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	3/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37745458	A A	ATATATAT others(9): Show ATATATATATATGCGTG	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02074.hp2 NA18969.hp1 HG01981.hp1 HG02074.hp2 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0037 a0001c0001t0002g0134 a0001c0001t0002g0190 a0001c0001t0001g0037 a0001c0001t0002g0134 a0001c0001t0002g0190	3	275	0.0109	16	c.897 others(31): Show c.897+478_897+479insCACGCATATATATATA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	3/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37745460	A A	ATATATAT others(9): Show ATATATATATATGCGTG	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0217 a0001c0001t0002g0217	1	282	0.0035	16	c.897 others(31): Show c.897+476_897+477insCACGCATATATATATA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	3/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37752075	C C	CTATATAT others(9): Show CTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02630.hp1 HG02647.hp1 others(1): Show HG01243.hp2 HG02630.hp1 HG02647.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0005 a0001c0001t0046 others(1): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0046 a0001c0003t0015	a0001c0001t0004g0256 a0001c0001t0005g0169 a0001c0001t0046g0240 others(1): Show a0001c0001t0004g0256 a0001c0001t0005g0169 a0001c0001t0046g0240 a0001c0003t0015g0161	4	25	0.1600	16	c.379 others(33): Show c.379-5636_379-5621dupTATATATATATATATA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	2/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37752075	C C	CTATATAT others(9): Show CTATATATATGTATATA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0131 a0001c0001t0009g0131	1	22	0.0455	16	c.379 others(33): Show c.379-5621_379-5620insTATATACATATATATA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	2/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37753563	G G	GAGAGAGA others(9): Show GAGAGAGAGAGAGAGAA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0003 a0003c0007t0003	a0003c0007t0003g0083 a0003c0007t0003g0083	1	284	0.0035	16	c.379 others(33): Show c.379-7109_379-7108insTTCTCTCTCTCTCTCT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	2/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37812180	A A	AAAAAAAA others(9): Show AAAAAAAAAAAACAAAC	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0051 a0001c0001t0051	a0001c0001t0051g0249 a0001c0001t0051g0249	1	281	0.0036	16	c.-27 others(35): Show c.-27-28821_-27-28820insGTTTGTTTTTTTTTTT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	1/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37812180	A A	AAAAAAAA others(9): Show AAAAAAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG02723.hp1 NA18522.hp2 HG02723.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0007 a0001c0001t0024g0060 a0001c0001t0024g0007 a0001c0001t0024g0060	2	282	0.0071	16	c.-27 others(35): Show c.-27-28821_-27-28820insGTTTGTTTGTTTTTTT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	1/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37812184	A A	AAAAAAAA others(9): Show AAAAAAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0002 a0001c0001t0028g0002	1	283	0.0035	16	c.-27 others(35): Show c.-27-28825_-27-28824insGTTTGTTTGTTTTTTT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	1/10			chr13	TogoVar
TRPC5_chrX_111763011_112087776	111782806	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02280.hp1 HG03098.hp1 HG01106.hp1 HG02280.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009	a0001c0001t0003g0142 a0001c0001t0005g0015 a0001c0001t0009g0160 a0001c0001t0003g0142 a0001c0001t0005g0015 a0001c0001t0009g0160	3	14	0.2143	16	c.189 others(33): Show c.1897-684_1897-669dupGTGTGTGTGTGTGTGT	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	7/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	111825127	T T	TTTCCTTC others(9): Show TTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02717.hp1 HG02818.hp2 others(2): Show HG02257.hp1 HG02717.hp1 HG02818.hp2 HG02886.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0025 others(1): Show a0001c0001t0004 a0001c0001t0006 a0001c0001t0025 a0001c0001t0034	a0001c0001t0004g0004 a0001c0001t0006g0023 a0001c0001t0006g0024 others(2): Show a0001c0001t0004g0004 a0001c0001t0006g0023 a0001c0001t0006g0024 a0001c0001t0025g0051 a0001c0001t0034g0150	5	139	0.0360	16	c.189 others(35): Show c.1896+9778_1896+9793dupGGAAGGAAGGAAGGAA	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	7/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	111825146	C C	CCTTCCTT others(9): Show CCTTCCTTCCTTTCTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0043 a0001c0001t0003g0043	1	53	0.0189	16	c.189 others(35): Show c.1896+9774_1896+9775insAAAGAAAGGAAGGAAG	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	7/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	111944267	A A	AGTATGTG others(9): Show AGTATGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0032 a0001c0001t0002 a0001c0001t0032	a0001c0001t0002g0022 a0001c0001t0032g0021 a0001c0001t0002g0022 a0001c0001t0032g0021	2	80	0.0250	16	c.378 others(33): Show c.378+7775_378+7776insACACACACACACATAC	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	2/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	111944303	T T	TGTGTGTG others(9): Show TGTGTGTGTGAAAGAGA	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0141 a0001c0001t0012g0141	1	123	0.0081	16	c.378 others(33): Show c.378+7739_378+7740insTCTCTTTCACACACAC	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	2/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	112005463	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0011 a0001c0001t0005g0011	1	137	0.0073	16	c.-21 others(35): Show c.-21-53038_-21-53023dupTTTTTTTTTTTTTTTT	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding	1/10			chrX	TogoVar
TRPC5_chrX_111763011_112087776	112082798	T T	TGTGTGTG others(9): Show TGTGTGTGTGTGTGTGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0036 a0001c0001t0006g0036	1	72	0.0139	16	c.-94 others(25): Show c.-942_-941insTCACACACACACACAC	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding		23		chrX	TogoVar
TRPC6_chr11_101446564_101589007	101449673	A A	AACACACA others(9): Show AACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0014 a0001c0013t0014	a0001c0013t0014g0099 a0001c0013t0014g0099	1	51	0.0196	16	c.32 others(27): Show c.3281_*3282insGTGTGTGTGTGTGTGT	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding		1890		chr11	TogoVar
TRPC6_chr11_101446564_101589007	101485126	T T	TACACACA others(9): Show TACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 NA19054.hp1 others(1): Show HG02896.hp1 HG02897.hp2 NA19054.hp1 NA19064.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0004 a0002c0004t0002 a0001c0002t0004 a0002c0004t0002	a0001c0002t0004g0248 a0001c0002t0004g0249 a0002c0004t0002g0154 others(1): Show a0001c0002t0004g0248 a0001c0002t0004g0249 a0002c0004t0002g0154 a0002c0004t0002g0156	4	128	0.0313	16	c.129 others(35): Show c.1294-1977_1294-1962dupGTGTGTGTGTGTGTGT	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	4/12			chr11	TogoVar
TRPC6_chr11_101446564_101589007	101491833	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp2 HG03453.hp2 others(2): Show HG02055.hp1 HG02109.hp2 HG03453.hp2 HG03471.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0007 a0001c0002 a0001c0003 a0001c0007	a0001c0002t0002 a0001c0003t0001 a0001c0007t0002 a0001c0002t0002 a0001c0003t0001 a0001c0007t0002	a0001c0002t0002g0059 a0001c0002t0002g0121 a0001c0003t0001g0123 others(2): Show a0001c0002t0002g0059 a0001c0002t0002g0121 a0001c0003t0001g0123 a0001c0003t0001g0125 a0001c0007t0002g0126	5	211	0.0237	16	c.946 others(29): Show c.946-96_946-95insAAAAAAAAAAAAAAAA	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	2/12			chr11	TogoVar
TRPC6_chr11_101446564_101589007	101499730	T T	TATATACA others(9): Show TATATACACAATATAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02970.hp1 HG02970.hp2 others(5): Show HG02630.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp2 HG03209.hp1 HG06807.hp1 NA18906.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0018 a0001c0001 a0001c0002 a0001c0018	a0001c0001t0005 a0001c0002t0002 a0001c0002t0004 others(1): Show a0001c0001t0005 a0001c0002t0002 a0001c0002t0004 a0001c0018t0002	a0001c0001t0005g0005 a0001c0001t0005g0006 a0001c0001t0005g0130 others(5): Show a0001c0001t0005g0005 a0001c0001t0005g0006 a0001c0001t0005g0130 a0001c0001t0005g0137 a0001c0002t0002g0068 a0001c0002t0002g0087 a0001c0002t0004g0241 a0001c0018t0002g0131	8	249	0.0321	16	c.945 others(33): Show c.945+4293_945+4294insTTTATATTGTGTATAT	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	2/12			chr11	TogoVar
TRPC6_chr11_101446564_101589007	101558308	T T	TGTATACA others(9): Show TGTATACATGTATATGG	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0246 a0001c0002t0004g0246	1	248	0.0040	16	c.170 others(35): Show c.170+25025_170+25026insCCATATACATGTATAC	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	1/12			chr11	TogoVar
TRPC6_chr11_101446564_101589007	101573921	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0009 a0001c0002t0002g0009	1	141	0.0071	16	c.170 others(33): Show c.170+9397_170+9412dupACACACACACACACAC	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	1/12			chr11	TogoVar
TRPC6_chr11_101446564_101589007	101573954	G G	GTGTGTGT others(9): Show GTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0008 a0001c0002t0002g0008	1	212	0.0047	16	c.170 others(33): Show c.170+9379_170+9380insTACACACACACACACA	TRPC6	ENSG00000137672.13	transcript	ENST00000344327.8	protein_coding	1/12			chr11	TogoVar
TRPC7_chr5_136207745_136370545	136365686	T T	TCACACAC others(9): Show TCACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0242 a0001c0002t0002g0242	1	26	0.0385	16	c.-43 others(25): Show c.-433_-432insTGTGTGTGTGTGTGTG	TRPC7	ENSG00000069018.19	transcript	ENST00000513104.6	protein_coding		142		chr5	TogoVar
TRPM1_chr15_30996065_31106725	31005104	A A	AAAATAAA others(9): Show AAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00733.hp1 HG00738.hp1 others(27): Show HG00140.hp1 HG00733.hp1 HG00738.hp1 HG01070.hp1 HG01081.hp1 HG01123.hp2 HG01257.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01884.hp2 HG01891.hp2 HG01993.hp2 HG02451.hp2 HG02615.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02922.hp2 HG02976.hp1 HG03098.hp2 HG03130.hp1 HG03516.hp1 HG03654.hp1 HG03688.hp2 HG03834.hp1 HG06807.hp1 NA19043.hp1 NA19240.hp1 NA20752.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0005 a0006 a0007 a0011 a0012 a0013 a0017 a0024	a0001c0001 a0001c0006 a0001c0009 others(19): Show a0001c0001 a0001c0006 a0001c0009 a0001c0024 a0001c0036 a0001c0037 a0001c0046 a0002c0002 a0002c0050 a0002c0056 a0003c0004 a0005c0007 a0006c0012 a0006c0060 a0007c0053 a0011c0059 a0011c0061 a0012c0021 a0013c0038 a0013c0044 a0017c0043 a0024c0042	a0001c0001t0003 a0001c0006t0003 a0001c0009t0001 others(20): Show a0001c0001t0003 a0001c0006t0003 a0001c0009t0001 a0001c0024t0001 a0001c0036t0003 a0001c0037t0001 a0001c0046t0001 a0002c0002t0001 a0002c0002t0003 a0002c0050t0001 a0002c0056t0001 a0003c0004t0001 a0005c0007t0001 a0006c0012t0003 a0006c0060t0003 a0007c0053t0001 a0011c0059t0001 a0011c0061t0001 a0012c0021t0003 a0013c0038t0008 a0013c0044t0006 a0017c0043t0001 a0024c0042t0001	a0001c0001t0003g0090 a0001c0001t0003g0134 a0001c0001t0003g0179 others(27): Show a0001c0001t0003g0090 a0001c0001t0003g0134 a0001c0001t0003g0179 a0001c0006t0003g0190 a0001c0009t0001g0033 a0001c0009t0001g0234 a0001c0009t0001g0243 a0001c0009t0001g0249 a0001c0024t0001g0120 a0001c0024t0001g0138 a0001c0036t0003g0194 a0001c0037t0001g0149 a0001c0046t0001g0229 a0002c0002t0001g0228 a0002c0002t0003g0180 a0002c0050t0001g0246 a0002c0056t0001g0156 a0003c0004t0001g0093 a0005c0007t0001g0158 a0006c0012t0003g0171 a0006c0012t0003g0172 a0006c0060t0003g0111 a0007c0053t0001g0016 a0011c0059t0001g0110 a0011c0061t0001g0128 a0012c0021t0003g0145 a0013c0038t0008g0115 a0013c0044t0006g0193 a0017c0043t0001g0035 a0024c0042t0001g0238	30	126	0.2381	16	c.363 others(35): Show c.3630-2050_3630-2035dupATTTATTTATTTATTT	TRPM1	ENSG00000134160.17	transcript	ENST00000256552.11	protein_coding	27/27			chr15	TogoVar
TRPM1_chr15_30996065_31106725	31072018	T T	TATATAGA others(9): Show TATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0036 a0001c0003t0002g0036	1	138	0.0072	16	c.84- others(31): Show c.84-1793_84-1792insCTCTCTCTCTCTATAT	TRPM1	ENSG00000134160.17	transcript	ENST00000256552.11	protein_coding	3/27			chr15	TogoVar
TRPM1_chr15_30996065_31106725	31072018	T T	TATATATA others(9): Show TATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0025 a0001c0003t0002g0025	1	138	0.0072	16	c.84- others(31): Show c.84-1793_84-1792insCTCTCTCTCTATATAT	TRPM1	ENSG00000134160.17	transcript	ENST00000256552.11	protein_coding	3/27			chr15	TogoVar
TRPM2_chr21_44348621_44447644	44373539	T T	TCTGCATT others(9): Show TCTGCATTATATGCGAC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0042 a0001c0003t0001g0042	1	35	0.0286	16	c.772 others(33): Show c.772-2212_772-2197dupTGCATTATATGCGACC	TRPM2	ENSG00000142185.18	transcript	ENST00000397928.6	protein_coding	5/31		INFO_REALIGN_3_PRIME	chr21	TogoVar
TRPM2_chr21_44348621_44447644	44398206	G G	GTTTTTTT others(9): Show GTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02273.hp1 HG06807.hp2 HG02004.hp1 HG02273.hp1 HG06807.hp2	a0003 a0007 a0003 a0007	a0003c0007 a0003c0014 a0007c0015 a0003c0007 a0003c0014 a0007c0015	a0003c0007t0003 a0003c0014t0003 a0007c0015t0002 a0003c0007t0003 a0003c0014t0003 a0007c0015t0002	a0003c0007t0003g0001 a0003c0014t0003g0044 a0007c0015t0002g0002 a0003c0007t0003g0001 a0003c0014t0003g0044 a0007c0015t0002g0002	3	19	0.1579	16	c.206 others(33): Show c.2062+342_2062+343insTTTTTTTTTTTTTTTT	TRPM2	ENSG00000142185.18	transcript	ENST00000397928.6	protein_coding	13/31		INFO_REALIGN_3_PRIME	chr21	TogoVar
TRPM3_chr9_70524060_71126621	70572114	T T	TTGTGTGT others(9): Show TTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03540.hp1 HG02922.hp1 HG03540.hp1	a0003 a0003	a0003c0015 a0003c0015	a0003c0015t0018 a0003c0015t0033 a0003c0015t0018 a0003c0015t0033	a0003c0015t0018g0081 a0003c0015t0033g0002 a0003c0015t0018g0081 a0003c0015t0033g0002	2	100	0.0200	16	c.322 others(37): Show c.3224-18820_3224-18805dupCACACACACACACACA	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	22/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70629214	C C	CGGGGGGC others(9): Show CGGGGGGCGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0003 a0003	a0003c0036 a0003c0036	a0003c0036t0028 a0003c0036t0028	a0003c0036t0028g0183 a0003c0036t0028g0183	1	73	0.0137	16	c.163 others(35): Show c.1633-3698_1633-3697insCCCCCCCCCGCCCCCC	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	12/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70629215	C C	CGGGGGGG others(9): Show CGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG00642.hp1 NA18955.hp2 NA18978.hp1 HG00642.hp1 NA18955.hp2 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0007 a0001c0002t0016 a0001c0001t0011 a0001c0002t0007 a0001c0002t0016	a0001c0001t0011g0020 a0001c0002t0007g0188 a0001c0002t0016g0194 a0001c0001t0011g0020 a0001c0002t0007g0188 a0001c0002t0016g0194	3	9	0.3333	16	c.163 others(35): Show c.1633-3699_1633-3698insCCCCCCCCCCCCCCCC	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	12/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70686675	C C	CTCCTTCC others(9): Show CTCCTTCCTTCTTTCCT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0056 a0001c0004t0056	a0001c0004t0056g0204 a0001c0004t0056g0204	1	212	0.0047	16	c.127 others(35): Show c.1273-5113_1273-5098dupAGGAAAGAAGGAAGGA	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	8/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70686686	T T	TTTCCTTC others(9): Show TTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG03453.hp2 NA20905.hp2 HG00323.hp2 HG03453.hp2 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0006 a0003c0020 a0001c0002 a0001c0006 a0003c0020	a0001c0002t0001 a0001c0006t0001 a0003c0020t0050 a0001c0002t0001 a0001c0006t0001 a0003c0020t0050	a0001c0002t0001g0050 a0001c0006t0001g0057 a0003c0020t0050g0106 a0001c0002t0001g0050 a0001c0006t0001g0057 a0003c0020t0050g0106	3	94	0.0319	16	c.127 others(35): Show c.1273-5124_1273-5109dupGGAAGGAAGGAAGGAA	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	8/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70703041	C C	CTGTGTGT others(9): Show CTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG03490.hp2 HG03492.hp2 others(1): Show HG02148.hp2 HG03490.hp2 HG03492.hp2 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0001 a0001c0002t0007 a0001c0001t0011 a0001c0002t0001 a0001c0002t0007	a0001c0001t0011g0017 a0001c0002t0001g0097 a0001c0002t0001g0098 others(1): Show a0001c0001t0011g0017 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0007g0180	4	117	0.0342	16	c.127 others(37): Show c.1273-21479_1273-21464dupCACACACACACACACA	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	8/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70722679	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0026 a0002c0003t0026	a0002c0003t0026g0038 a0002c0003t0026g0038	1	140	0.0071	16	c.127 others(37): Show c.1272+38906_1272+38921dupGTGTGTGTGTGTGTGT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	8/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70781326	T T	TAAAAAAA others(9): Show TAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03195.hp1 HG02976.hp1 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0175 a0001c0002t0002g0176 a0001c0002t0002g0175 a0001c0002t0002g0176	2	39	0.0513	16	c.114 others(35): Show c.1148+2763_1148+2778dupTTTTTTTTTTTTTTTT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	7/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70786311	C C	CAAAAAAA others(9): Show CAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0003 a0003	a0003c0029 a0003c0029	a0003c0029t0005 a0003c0029t0005	a0003c0029t0005g0022 a0003c0029t0005g0022	1	59	0.0169	16	c.974 others(33): Show c.974-2048_974-2033dupTTTTTTTTTTTTTTTT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	6/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70831962	A A	AATATATA others(9): Show AATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00140.hp1 HG00423.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0012 a0002c0003t0008 a0001c0002t0012 a0002c0003t0008	a0001c0002t0012g0170 a0002c0003t0008g0009 a0001c0002t0012g0170 a0002c0003t0008g0009	2	69	0.0290	16	c.802 others(33): Show c.802-3960_802-3945dupATATATATATATATAT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	5/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70877804	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01255.hp2 HG01496.hp2 others(13): Show HG00280.hp1 HG01255.hp2 HG01496.hp2 HG02257.hp1 HG02572.hp2 HG02630.hp2 HG02717.hp2 HG03688.hp2 HG03710.hp2 HG04184.hp1 HG04199.hp2 NA18906.hp2 NA18983.hp1 NA18983.hp2 NA19000.hp2 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0004 others(7): Show a0001c0001 a0001c0002 a0001c0004 a0001c0007 a0001c0008 a0002c0003 a0002c0005 a0003c0009 a0003c0018 a0003c0034	a0001c0001t0001 a0001c0001t0029 a0001c0002t0002 others(11): Show a0001c0001t0001 a0001c0001t0029 a0001c0002t0002 a0001c0002t0020 a0001c0002t0047 a0001c0004t0002 a0001c0007t0004 a0001c0008t0057 a0002c0003t0003 a0002c0003t0008 a0002c0005t0003 a0003c0009t0023 a0003c0018t0005 a0003c0034t0053	a0001c0001t0001g0131 a0001c0001t0029g0181 a0001c0002t0002g0151 others(13): Show a0001c0001t0001g0131 a0001c0001t0029g0181 a0001c0002t0002g0151 a0001c0002t0020g0149 a0001c0002t0020g0152 a0001c0002t0047g0117 a0001c0004t0002g0121 a0001c0004t0002g0143 a0001c0007t0004g0054 a0001c0008t0057g0182 a0002c0003t0003g0037 a0002c0003t0008g0015 a0002c0005t0003g0068 a0003c0009t0023g0145 a0003c0018t0005g0108 a0003c0034t0053g0154	16	58	0.2759	16	c.178 others(35): Show c.178-13309_178-13294dupGTGTGTGTGTGTGTGT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	1/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70921942	A A	AACACACA others(9): Show AACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02080.hp2 HG02523.hp2 others(5): Show HG00597.hp1 HG02080.hp2 HG02523.hp2 HG02723.hp2 HG02809.hp1 HG03041.hp1 HG06807.hp1 NA18970.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0009	a0001c0001 a0001c0002 a0001c0010 others(4): Show a0001c0001 a0001c0002 a0001c0010 a0002c0003 a0003c0021 a0004c0012 a0009c0026	a0001c0001t0001 a0001c0002t0002 a0001c0002t0007 others(5): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0007 a0001c0010t0045 a0002c0003t0003 a0003c0021t0021 a0004c0012t0010 a0009c0026t0006	a0001c0001t0001g0166 a0001c0002t0002g0162 a0001c0002t0007g0197 others(5): Show a0001c0001t0001g0166 a0001c0002t0002g0162 a0001c0002t0007g0197 a0001c0010t0045g0168 a0002c0003t0003g0169 a0003c0021t0021g0148 a0004c0012t0010g0150 a0009c0026t0006g0165	8	96	0.0833	16	c.178 others(35): Show c.178-57447_178-57432dupGTGTGTGTGTGTGTGT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	1/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70974863	A A	ATTTTTTT others(9): Show ATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03486.hp2 NA21309.hp1 HG02257.hp2 HG03486.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0008 a0002c0003 a0001c0002 a0001c0008 a0002c0003	a0001c0002t0070 a0001c0008t0004 a0002c0003t0058 a0001c0002t0070 a0001c0008t0004 a0002c0003t0058	a0001c0002t0070g0214 a0001c0008t0004g0089 a0002c0003t0058g0207 a0001c0002t0070g0214 a0001c0008t0004g0089 a0002c0003t0058g0207	3	138	0.0217	16	c.178 others(37): Show c.178-110368_178-110353dupAAAAAAAAAAAAAAAA	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	1/25			chr9	TogoVar

Search by Variant

Search

Search Results