Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SMS_chrX_21935709_21999837	21944544	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAGAAAAG	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp2 NA20129.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0167 a0001c0001t0004g0177 a0001c0001t0001g0167 a0001c0001t0004g0177	2	248	0.0081	17	c.49+ others(32): Show c.49+3672_49+3673insAAAAAAAAAAGAAAAGA	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
SMS_chrX_21935709_21999837	21988662	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02523.hp2 NA19065.hp1 NA19078.hp2 others(1): Show HG02523.hp2 NA19065.hp1 NA19078.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0236 others(1): Show a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0236 a0001c0001t0001g0244	4	7	0.5714	17	c.945 others(34): Show c.945+3453_945+3469dupAAAAAAAAAAAAAAAAA	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
SMTNL2_chr17_4579529_4613319	4603374	A A	AGAATAAG others(10): Show AGAATAAGTAGCCTTATG	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0171 a0001c0003t0011g0171	1	440	0.0023	17	c.126 others(36): Show c.1260-3985_1260-3969dupAATAAGTAGCCTTATGG	SMTNL2	ENSG00000188176.12	transcript	ENST00000389313.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
SMURF2_chr17_64537282_64667307	64566561	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02717.hp2 HG01071.hp1 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0001t0007g0018 a0001c0001t0007g0020	2	43	0.0465	17	c.101 others(36): Show c.1017-3612_1017-3596dupAAAAAAAAAAAAAAAAA	SMURF2	ENSG00000108854.16	transcript	ENST00000262435.14	protein_coding	10/18			chr17	TogoVar
SMYD3_chr1_245744347_246512279	245797828	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0057 a0001c0012t0002g0057	1	73	0.0137	17	c.107 others(38): Show c.1077-33696_1077-33680dupTTTTTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	10/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245833073	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03130.hp2 HG02280.hp2 HG03130.hp2	a0002 a0002	a0002c0004 a0002c0005 a0002c0004 a0002c0005	a0002c0004t0001 a0002c0005t0001 a0002c0004t0001 a0002c0005t0001	a0002c0004t0001g0117 a0002c0005t0001g0115 a0002c0004t0001g0117 a0002c0005t0001g0115	2	71	0.0282	17	c.107 others(38): Show c.1076+25422_1076+25423insGTTTTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	10/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245951321	T T	TCACGCCT others(10): Show TCACGCCTGTCATCCCAG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00544.hp2 others(48): Show HG00408.hp1 HG00423.hp2 HG00544.hp2 HG00597.hp2 HG00621.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01109.hp1 HG01109.hp2 HG01243.hp1 HG01243.hp2 HG01433.hp2 HG01934.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02056.hp1 HG02071.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02486.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02717.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03209.hp2 HG03471.hp1 HG04228.hp1 NA18962.hp2 NA18963.hp2 NA18965.hp1 NA18971.hp1 NA18971.hp2 NA19000.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(9): Show a0001c0001 a0001c0002 a0001c0006 a0001c0011 a0001c0012 a0002c0003 a0002c0004 a0002c0005 a0002c0007 a0002c0008 a0002c0016 a0002c0017	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0006t0001 a0001c0006t0003 a0001c0011t0002 a0001c0012t0002 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0002c0005t0001 a0002c0005t0002 a0002c0007t0001 a0002c0007t0004 a0002c0008t0001 a0002c0008t0002 a0002c0016t0001 a0002c0017t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(48): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0023 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0092 a0001c0001t0002g0004 a0001c0001t0002g0030 a0001c0001t0002g0038 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0049 a0001c0001t0002g0076 a0001c0002t0001g0015 a0001c0002t0001g0066 a0001c0002t0001g0070 a0001c0002t0001g0072 a0001c0006t0001g0014 a0001c0006t0001g0060 a0001c0006t0001g0071 a0001c0006t0003g0001 a0001c0011t0002g0018 a0001c0012t0002g0057 a0002c0003t0001g0100 a0002c0003t0001g0101 a0002c0003t0001g0103 a0002c0003t0001g0109 a0002c0003t0001g0118 a0002c0003t0001g0127 a0002c0003t0001g0136 a0002c0003t0002g0102 a0002c0003t0002g0104 a0002c0003t0002g0122 a0002c0003t0002g0124 a0002c0003t0002g0125 a0002c0004t0001g0134 a0002c0004t0001g0144 a0002c0005t0001g0123 a0002c0005t0002g0106 a0002c0007t0001g0140 a0002c0007t0004g0111 a0002c0008t0001g0112 a0002c0008t0001g0145 a0002c0008t0002g0142 a0002c0016t0001g0097 a0002c0017t0001g0139	51	150	0.3400	17	c.532 others(36): Show c.532-21385_532-21384insCTGGGATGACAGGCGTG	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246245120	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0066 a0001c0002t0001g0066	1	45	0.0222	17	c.531 others(36): Show c.531+82064_531+82080dupAAAAAAAAAAAAAAAAA	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246378721	T T	TATATATA others(10): Show TATATATAATTATATATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02647.hp1 HG02895.hp1 others(2): Show HG02145.hp1 HG02647.hp1 HG02895.hp1 HG02965.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0004 a0001c0002 a0001c0006 a0002c0004	a0001c0002t0001 a0001c0006t0001 a0001c0006t0003 others(1): Show a0001c0002t0001 a0001c0006t0001 a0001c0006t0003 a0002c0004t0001	a0001c0002t0001g0066 a0001c0006t0001g0060 a0001c0006t0003g0001 others(2): Show a0001c0002t0001g0066 a0001c0006t0001g0060 a0001c0006t0003g0001 a0002c0004t0001g0107 a0002c0004t0001g0128	5	150	0.0333	17	c.165 others(36): Show c.165-23628_165-23627insTATATATAATTATATAT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	1/11			chr1	TogoVar
SMYD4_chr17_1774485_1834902	1794105	A A	ATATATAT others(10): Show ATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03688.hp2 HG02717.hp2 HG03688.hp2	a0006 a0008 a0006 a0008	a0006c0005 a0008c0008 a0006c0005 a0008c0008	a0006c0005t0006 a0008c0008t0002 a0006c0005t0006 a0008c0008t0002	a0006c0005t0006g0352 a0008c0008t0002g0348 a0006c0005t0006g0352 a0008c0008t0002g0348	2	80	0.0250	17	c.153 others(36): Show c.1537+5751_1537+5752insAAAAAAAAATATATATA	SMYD4	ENSG00000186532.12	transcript	ENST00000305513.12	protein_coding	5/10			chr17	TogoVar
SNAI3_chr16_88672688_88691507	88682762	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18977.hp2 NA18977.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0085 a0001c0001t0003g0085	1	48	0.0208	17	c.77- others(32): Show c.77-1065_77-1049dupAAAAAAAAAAAAAAAAA	SNAI3	ENSG00000185669.6	transcript	ENST00000332281.6	protein_coding	1/2			chr16	TogoVar
SNAI3_chr16_88672688_88691507	88689054	G G	GACTGTTG others(10): Show GACTGTTGTTTGTTTTAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	398	0.0025	17	c.-26 others(28): Show c.-2649_-2648insTTAAAACAAACAACAGT	SNAI3	ENSG00000185669.6	transcript	ENST00000332281.6	protein_coding		2548		chr16	TogoVar
SNAP23_chr15_42490634_42538058	42525451	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0225 a0001c0002t0014g0225	1	68	0.0147	17	c.267 others(34): Show c.267-2797_267-2781dupTTTTTTTTTTTTTTTTT	SNAP23	ENSG00000092531.10	transcript	ENST00000249647.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr15	TogoVar
SNAP91_chr6_83547885_83714101	83556340	G G	GGAGAGGG others(10): Show GGAGAGGGAGAGGAGAGA	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0281 a0001c0001t0001g0281	1	211	0.0047	17	c.263 others(32): Show c.2632-96_2632-95insTCTCTCCTCTCCCTCTC	SNAP91	ENSG00000065609.15	transcript	ENST00000369694.7	protein_coding	28/29			chr6	TogoVar
SNAPC1_chr14_61757420_61801428	61762420	A A	AGAGGCGT others(10): Show AGAGGCGTGCGGGCTTCG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00738.hp1 HG01074.hp1 HG01255.hp1 others(27): Show HG00738.hp1 HG01074.hp1 HG01255.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03098.hp1 HG03471.hp2 HG03490.hp2 HG03492.hp1 HG03540.hp1 HG04204.hp2 NA18939.hp1 NA18940.hp2 NA18947.hp1 NA18970.hp1 NA18972.hp1 NA18981.hp2 NA18984.hp1 NA18990.hp1 NA19001.hp2 NA19054.hp2 NA19058.hp1 NA19063.hp1 NA19067.hp2 NA19068.hp1 NA19074.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0004 a0001c0001t0026 a0001c0006t0027 a0001c0001t0004 a0001c0001t0026 a0001c0006t0027	a0001c0001t0004g0003 a0001c0001t0004g0036 a0001c0001t0004g0038 others(24): Show a0001c0001t0004g0003 a0001c0001t0004g0036 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 a0001c0001t0004g0042 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0047 a0001c0001t0004g0048 a0001c0001t0004g0049 a0001c0001t0004g0051 a0001c0001t0004g0052 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0055 a0001c0001t0004g0057 a0001c0001t0004g0058 a0001c0001t0004g0060 a0001c0001t0004g0061 a0001c0001t0004g0062 a0001c0001t0004g0063 a0001c0001t0004g0066 a0001c0001t0004g0071 a0001c0001t0026g0050 a0001c0006t0027g0151	30	246	0.1220	17	c.-22 others(23): Show c.-22_-6dupAGGCGTGCGGGCTTCGG	SNAPC1	ENSG00000023608.5	transcript	ENST00000216294.5	protein_coding	1/10	5	INFO_REALIGN_3_PRIME	chr14	TogoVar
SNAPC1_chr14_61757420_61801428	61797175	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03540.hp1 HG04204.hp2 HG03098.hp1 HG03540.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0057 a0001c0001t0004g0062 a0001c0001t0004g0071 a0001c0001t0004g0057 a0001c0001t0004g0062 a0001c0001t0004g0071	3	180	0.0167	17	c.21 others(28): Show c.2192_*2193insTTTTTTTTTTTTTTTTT	SNAPC1	ENSG00000023608.5	transcript	ENST00000216294.5	protein_coding		748		chr14	TogoVar
SNCAIP_chr5_122307237_122469219	122351536	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18995.hp2 NA19067.hp1 others(1): Show NA18979.hp1 NA18995.hp2 NA19067.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0112 a0001c0001t0001g0145 others(1): Show a0001c0001t0001g0097 a0001c0001t0001g0112 a0001c0001t0001g0145 a0001c0001t0001g0147	4	27	0.1481	17	c.-47 others(36): Show c.-47+39266_-47+39282dupAAAAAAAAAAAAAAAAA	SNCAIP	ENSG00000064692.20	transcript	ENST00000261368.13	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNCA_chr4_89719099_89842161	89748826	A A	ATTTCCAC others(10): Show ATTTCCACCTTCTAGTCC	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG01168.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0004 a0001c0001t0007	a0001c0001t0004g0303 a0001c0001t0007g0304 a0001c0001t0004g0303 a0001c0001t0007g0304	2	338	0.0059	17	c.307 others(36): Show c.307-19566_307-19550dupGGACTAGAAGGTGGAAA	SNCA	ENSG00000145335.17	transcript	ENST00000394991.8	protein_coding	4/5			chr4	TogoVar
SND1_chr7_127647194_128097593	127727834	T T	TGAAAAAA others(10): Show TGAAAAAAATTACTATTA	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	260	0.0038	17	c.115 others(36): Show c.1152+6438_1152+6454dupAAAAATTACTATTAGAA	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	10/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127922199	T T	TTTTTTTT others(10): Show TTTTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01257.hp1 HG02004.hp1 others(1): Show HG01099.hp2 HG01257.hp1 HG02004.hp1 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0120 a0001c0001t0001g0146 a0001c0001t0001g0157 others(1): Show a0001c0001t0001g0120 a0001c0001t0001g0146 a0001c0001t0001g0157 a0001c0002t0001g0151	4	119	0.0336	17	c.152 others(36): Show c.1528-6985_1528-6984insTTTTTTTTTTTTGTTTT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127958444	G G	GTGGCCAT others(10): Show GTGGCCATGCATGGTGCA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02572.hp2 HG02922.hp1 others(3): Show HG02257.hp2 HG02572.hp2 HG02922.hp1 HG03486.hp1 NA18522.hp2 NA18906.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0095 a0001c0004t0001g0096 a0001c0004t0001g0097 others(3): Show a0001c0004t0001g0095 a0001c0004t0001g0096 a0001c0004t0001g0097 a0001c0004t0001g0165 a0001c0004t0001g0166 a0001c0004t0001g0167	6	260	0.0231	17	c.166 others(38): Show c.1669+29115_1669+29116insTGGCCATGCATGGTGCA	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	15/23			chr7	TogoVar
SNRK_chr3_43281540_43356143	43322951	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0020 a0001c0011t0020	a0001c0011t0020g0020 a0001c0011t0020g0020	1	7	0.1429	17	c.590 others(34): Show c.590-9203_590-9202insAAAAAAAAAAAAAAAAA	SNRK	ENSG00000163788.14	transcript	ENST00000296088.12	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
SNRNP40_chr1_31254568_31301788	31286022	T T	TGTGAAAG others(10): Show TGTGAAAGTACAAGGGGG	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00609.hp1 HG02071.hp2 others(26): Show HG00408.hp2 HG00609.hp1 HG02071.hp2 HG02080.hp1 HG02135.hp1 NA18939.hp1 NA18950.hp2 NA18952.hp1 NA18957.hp1 NA18962.hp2 NA18963.hp1 NA18965.hp1 NA18968.hp1 NA18981.hp2 NA18984.hp1 NA18986.hp1 NA18987.hp2 NA18993.hp1 NA18994.hp2 NA18998.hp2 NA19003.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19057.hp1 NA19062.hp1 NA19070.hp1 NA19087.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0009 a0001c0001t0004g0033 a0001c0001t0004g0272 others(23): Show a0001c0001t0004g0009 a0001c0001t0004g0033 a0001c0001t0004g0272 a0001c0001t0004g0273 a0001c0001t0004g0274 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0004g0279 a0001c0001t0004g0280 a0001c0001t0004g0281 a0001c0001t0004g0282 a0001c0001t0004g0283 a0001c0001t0004g0284 a0001c0001t0004g0285 a0001c0001t0004g0286 a0001c0001t0004g0287 a0001c0001t0004g0288 a0001c0001t0004g0289 a0001c0001t0004g0290 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0293 a0001c0001t0004g0294 a0001c0001t0004g0295	29	352	0.0824	17	c.531 others(34): Show c.531+3231_531+3232insCCCCCTTGTACTTTCAC	SNRNP40	ENSG00000060688.13	transcript	ENST00000263694.9	protein_coding	4/9			chr1	TogoVar
SNRPA1_chr15_101276510_101300248	101289925	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG02615.hp1 others(5): Show HG01884.hp2 HG02055.hp1 HG02615.hp1 HG02622.hp1 HG03098.hp1 HG03195.hp2 HG03209.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0050 a0001c0001t0001g0062 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0176	8	188	0.0426	17	c.309 others(34): Show c.309+2020_309+2036dupTTTTTTTTTTTTTTTTT	SNRPA1	ENSG00000131876.18	transcript	ENST00000254193.11	protein_coding	3/8			chr15	TogoVar
SNRPB2_chr20_16725026_16747564	16745324	G G	GTGTGAGG others(10): Show GTGTGAGGTGATCATTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0082 a0001c0001t0008g0082	1	470	0.0021	17	c.43 others(28): Show c.4319_*4320insTGTGAGGTGATCATTGT	SNRPB2	ENSG00000125870.11	transcript	ENST00000246071.8	protein_coding		2761		chr20	TogoVar
SNRPD3_chr22_24550999_24579971	24561064	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG02647.hp1 HG02886.hp2 others(2): Show HG01257.hp2 HG02647.hp1 HG02886.hp2 HG03041.hp1 NA18951.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0046 a0001c0002t0002g0053 others(2): Show a0001c0002t0002g0003 a0001c0002t0002g0046 a0001c0002t0002g0053 a0001c0002t0002g0055 a0001c0002t0002g0056	5	250	0.0200	17	c.126 others(34): Show c.126+3273_126+3289dupTTTTTTTTTTTTTTTTT	SNRPD3	ENSG00000100028.12	transcript	ENST00000215829.8	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
SNRPD3_chr22_24550999_24579971	24568719	G G	GCTACTTT others(10): Show GCTACTTTTTGTATTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01081.hp1 HG01496.hp1 others(1): Show HG00099.hp2 HG01081.hp1 HG01496.hp1 NA20752.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0027 a0001c0002t0002g0062 a0001c0002t0002g0063 a0001c0002t0002g0027 a0001c0002t0002g0062 a0001c0002t0002g0063	4	398	0.0101	17	c.319 others(32): Show c.319+544_319+560dupCTACTTTTTGTATTTTT	SNRPD3	ENSG00000100028.12	transcript	ENST00000215829.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
SNRPE_chr1_203856599_203876152	203864876	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0060 a0001c0001t0010g0060	1	30	0.0333	17	c.145 others(32): Show c.145-156_145-140dupAAAAAAAAAAAAAAAAA	SNRPE	ENSG00000182004.13	transcript	ENST00000414487.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNRPE_chr1_203856599_203876152	203867123	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA19009.hp2 NA18989.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0049 a0001c0001t0007g0051 a0001c0001t0007g0049 a0001c0001t0007g0051	2	211	0.0095	17	c.223 others(34): Show c.223+2011_223+2012insAAAAAAAAACAAAAAAA	SNRPE	ENSG00000182004.13	transcript	ENST00000414487.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNRPG_chr2_70276362_70298740	70283096	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0180	1	245	0.0041	17	c.181 others(34): Show c.181-1429_181-1413dupTTTTTTTTTTTTTTTTT	SNRPG	ENSG00000143977.14	transcript	ENST00000272348.7	protein_coding	3/3			chr2	TogoVar
SNTG1_chr8_49906407_50801692	49980521	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02976.hp2 NA20300.hp1 HG02976.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0037 a0001c0001t0035 a0001c0001t0037	a0001c0001t0035g0031 a0001c0001t0037g0034 a0001c0001t0035g0031 a0001c0001t0037g0034	2	9	0.2222	17	c.-10 others(38): Show c.-103+68304_-103+68320dupAAAAAAAAAAAAAAAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50381835	A A	ATATTATA others(10): Show ATATTATATATATATATT	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0079 a0001c0001t0004g0079	1	106	0.0094	17	c.-27 others(36): Show c.-27-12376_-27-12375insATTATATATATATATTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50381836	T T	TATTATAT others(10): Show TATTATATATATATATTA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03098.hp2 HG02622.hp2 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0044 a0002c0003t0043 a0001c0002t0044 a0002c0003t0043	a0001c0002t0044g0047 a0002c0003t0043g0050 a0001c0002t0044g0047 a0002c0003t0043g0050	2	100	0.0200	17	c.-27 others(36): Show c.-27-12376_-27-12375insATTATATATATATATTA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18			chr8	TogoVar
SNTG1_chr8_49906407_50801692	50422270	A A	ATCTATCT others(10): Show ATCTATCTATCTATCTAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02451.hp1 HG03098.hp2 others(2): Show HG01884.hp1 HG02451.hp1 HG03098.hp2 HG03139.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0005 a0001c0001t0023 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0023 a0001c0001t0046 a0001c0002t0044	a0001c0001t0002g0026 a0001c0001t0005g0018 a0001c0001t0023g0002 others(2): Show a0001c0001t0002g0026 a0001c0001t0005g0018 a0001c0001t0023g0002 a0001c0001t0046g0104 a0001c0002t0044g0047	5	7	0.7143	17	c.163 others(36): Show c.163-16273_163-16272insTCTATCTATCTATCTAT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	4/18			chr8	TogoVar
SNTG1_chr8_49906407_50801692	50601152	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03209.hp1 HG03225.hp1 HG02055.hp2 HG03209.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0006 a0001c0002t0047 a0001c0001t0004 a0001c0002t0006 a0001c0002t0047	a0001c0001t0004g0074 a0001c0002t0006g0054 a0001c0002t0047g0103 a0001c0001t0004g0074 a0001c0002t0006g0054 a0001c0002t0047g0103	3	5	0.6000	17	c.849 others(36): Show c.849+10251_849+10267dupAAAAAAAAAAAAAAAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50701618	C C	CTTCTTCT others(10): Show CTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG03139.hp1 HG04115.hp1 others(1): Show HG00741.hp2 HG03139.hp1 HG04115.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0012 a0001c0001t0037 others(1): Show a0001c0001t0004 a0001c0001t0012 a0001c0001t0037 a0001c0001t0046	a0001c0001t0004g0088 a0001c0001t0012g0063 a0001c0001t0037g0034 others(1): Show a0001c0001t0004g0088 a0001c0001t0012g0063 a0001c0001t0037g0034 a0001c0001t0046g0104	4	88	0.0455	17	c.103 others(36): Show c.1039-2982_1039-2981insTTCTTCTTCTTCTTCTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18			chr8	TogoVar
SNTG2_chr2_945849_1372613	996673	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02717.hp1 HG02717.hp2 others(4): Show HG02559.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02886.hp2 HG02970.hp2 HG03239.hp1	a0002 a0005 a0009 others(1): Show a0002 a0005 a0009 a0013	a0002c0005 a0005c0006 a0009c0012 others(1): Show a0002c0005 a0005c0006 a0009c0012 a0013c0018	a0002c0005t0001 a0005c0006t0001 a0009c0012t0001 others(1): Show a0002c0005t0001 a0005c0006t0001 a0009c0012t0001 a0013c0018t0001	a0002c0005t0001g0133 a0005c0006t0001g0081 a0005c0006t0001g0082 others(4): Show a0002c0005t0001g0133 a0005c0006t0001g0081 a0005c0006t0001g0082 a0005c0006t0001g0083 a0009c0012t0001g0066 a0009c0012t0001g0146 a0013c0018t0001g0046	7	8	0.8750	17	c.72+ others(34): Show c.72+45620_72+45636dupTTTTTTTTTTTTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1221650	C C	CTCTGTCT others(10): Show CTCTGTCTCTGTCTCTGT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0123 a0001c0002t0001g0123	1	36	0.0278	17	c.719 others(36): Show c.719+12420_719+12421insTCTGTCTCTGTCTCTGT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16			chr2	TogoVar
SNTG2_chr2_945849_1372613	1372530	A A	ATGGATGG others(10): Show ATGGATGGGCAGCTTGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(156): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00323.hp2 HG00438.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 NA18522.hp1 NA18522.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA19000.hp1 NA19000.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19084.hp1 NA19084.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(16): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0021	a0001c0001 a0001c0002 a0002c0003 others(30): Show a0001c0001 a0001c0002 a0002c0003 a0002c0005 a0002c0022 a0002c0033 a0003c0007 a0003c0008 a0003c0026 a0004c0004 a0004c0014 a0005c0006 a0005c0015 a0006c0009 a0006c0010 a0006c0028 a0007c0016 a0007c0017 a0007c0024 a0008c0011 a0008c0031 a0009c0012 a0010c0013 a0010c0029 a0013c0018 a0014c0032 a0015c0025 a0016c0023 a0017c0036 a0018c0035 a0019c0030 a0020c0021 a0021c0027	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(38): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0002c0003t0001 a0002c0005t0001 a0002c0022t0001 a0002c0033t0001 a0003c0007t0001 a0003c0007t0002 a0003c0008t0001 a0003c0008t0002 a0003c0026t0001 a0004c0004t0001 a0004c0004t0002 a0004c0014t0001 a0004c0014t0002 a0005c0006t0001 a0005c0006t0002 a0005c0015t0001 a0006c0009t0001 a0006c0010t0001 a0006c0028t0001 a0007c0016t0001 a0007c0017t0001 a0007c0024t0002 a0008c0011t0001 a0008c0031t0001 a0009c0012t0001 a0010c0013t0001 a0010c0029t0001 a0013c0018t0001 a0014c0032t0001 a0015c0025t0001 a0016c0023t0001 a0017c0036t0001 a0018c0035t0001 a0019c0030t0001 a0020c0021t0001 a0021c0027t0001	a0001c0001t0001g0017 a0001c0001t0001g0026 a0001c0001t0001g0027 others(156): Show a0001c0001t0001g0017 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0063 a0001c0001t0001g0078 a0001c0001t0001g0101 a0001c0001t0001g0111 a0001c0001t0001g0130 a0001c0001t0001g0134 a0001c0001t0001g0139 a0001c0001t0001g0144 a0001c0001t0001g0173 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0187 a0001c0001t0003g0128 a0001c0002t0001g0006 a0001c0002t0001g0009 a0001c0002t0001g0014 a0001c0002t0001g0016 a0001c0002t0001g0024 a0001c0002t0001g0025 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0041 a0001c0002t0001g0069 a0001c0002t0001g0084 a0001c0002t0001g0092 a0001c0002t0001g0113 a0001c0002t0001g0118 a0001c0002t0001g0120 a0001c0002t0001g0123 a0001c0002t0001g0137 a0001c0002t0001g0141 a0001c0002t0001g0145 a0001c0002t0001g0170 a0001c0002t0001g0172 a0001c0002t0001g0186 a0001c0002t0002g0002 a0001c0002t0002g0076 a0001c0002t0004g0051 a0002c0003t0001g0015 a0002c0003t0001g0029 a0002c0003t0001g0052 a0002c0003t0001g0053 a0002c0003t0001g0064 a0002c0003t0001g0094 a0002c0003t0001g0095 a0002c0003t0001g0098 a0002c0003t0001g0099 a0002c0003t0001g0108 a0002c0003t0001g0109 a0002c0003t0001g0122 a0002c0003t0001g0148 a0002c0003t0001g0154 a0002c0003t0001g0158 a0002c0003t0001g0161 a0002c0003t0001g0167 a0002c0003t0001g0171 a0002c0003t0001g0175 a0002c0003t0001g0183 a0002c0005t0001g0013 a0002c0005t0001g0021 a0002c0005t0001g0022 a0002c0005t0001g0107 a0002c0005t0001g0121 a0002c0005t0001g0133 a0002c0005t0001g0156 a0002c0005t0001g0164 a0002c0005t0001g0168 a0002c0022t0001g0155 a0002c0033t0001g0126 a0003c0007t0001g0007 a0003c0007t0001g0019 a0003c0007t0001g0060 a0003c0007t0001g0068 a0003c0007t0001g0080 a0003c0007t0001g0104 a0003c0007t0001g0116 a0003c0007t0001g0184 a0003c0007t0002g0075 a0003c0007t0002g0077 a0003c0008t0001g0011 a0003c0008t0001g0044 a0003c0008t0001g0059 a0003c0008t0001g0096 a0003c0008t0001g0102 a0003c0008t0001g0105 a0003c0008t0001g0132 a0003c0008t0001g0190 a0003c0008t0002g0072 a0003c0026t0001g0097 a0004c0004t0001g0040 a0004c0004t0001g0065 a0004c0004t0001g0087 a0004c0004t0001g0112 a0004c0004t0001g0142 a0004c0004t0001g0149 a0004c0004t0001g0150 a0004c0004t0001g0151 a0004c0004t0001g0169 a0004c0004t0001g0177 a0004c0004t0001g0180 a0004c0004t0001g0181 a0004c0004t0002g0074 a0004c0014t0001g0036 a0004c0014t0001g0054 a0004c0014t0002g0001 a0005c0006t0001g0079 a0005c0006t0001g0081 a0005c0006t0001g0082 a0005c0006t0001g0083 a0005c0006t0001g0085 a0005c0006t0001g0086 a0005c0006t0001g0176 a0005c0006t0001g0189 a0005c0006t0002g0003 a0005c0015t0001g0037 a0006c0009t0001g0048 a0006c0009t0001g0050 a0006c0009t0001g0093 a0006c0009t0001g0162 a0006c0010t0001g0033 a0006c0010t0001g0043 a0006c0010t0001g0165 a0006c0028t0001g0127 a0007c0016t0001g0005 a0007c0016t0001g0032 a0007c0016t0001g0143 a0007c0017t0001g0106 a0007c0017t0001g0125 a0007c0024t0002g0073 a0008c0011t0001g0004 a0008c0011t0001g0135 a0008c0011t0001g0182 a0008c0011t0001g0188 a0008c0031t0001g0117 a0009c0012t0001g0066 a0009c0012t0001g0091 a0009c0012t0001g0146 a0009c0012t0001g0163 a0010c0013t0001g0042 a0010c0013t0001g0140 a0010c0013t0001g0166 a0010c0029t0001g0152 a0013c0018t0001g0045 a0013c0018t0001g0046 a0014c0032t0001g0062 a0015c0025t0001g0034 a0016c0023t0001g0049 a0017c0036t0001g0070 a0018c0035t0001g0071 a0019c0030t0001g0160 a0020c0021t0001g0119 a0021c0027t0001g0136	159	188	0.8457	17	c.50 others(28): Show c.5056_*5057insTGGATGGGCAGCTTGGG	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding		4918		chr2	TogoVar
SNX10_chr7_26286862_26379383	26358805	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02109.hp1 HG02486.hp1 others(7): Show HG01069.hp2 HG02109.hp1 HG02486.hp1 HG02622.hp1 HG02818.hp2 HG03453.hp1 HG03540.hp1 HG03540.hp2 NA18965.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0013 a0001c0001t0027	a0001c0001t0001g0086 a0001c0001t0001g0345 a0001c0001t0001g0361 others(7): Show a0001c0001t0001g0086 a0001c0001t0001g0345 a0001c0001t0001g0361 a0001c0001t0004g0114 a0001c0001t0004g0120 a0001c0001t0004g0204 a0001c0001t0004g0206 a0001c0001t0011g0363 a0001c0001t0013g0369 a0001c0001t0027g0113	10	201	0.0498	17	c.25- others(32): Show c.25-2167_25-2151dupTTTTTTTTTTTTTTTTT	SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX13_chr7_17785761_17945494	17809339	C C	CAGACTTT others(10): Show CAGACTTTAAACCAACAA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02622.hp1 HG02647.hp1 others(3): Show HG01074.hp1 HG02622.hp1 HG02647.hp1 HG03471.hp1 HG03579.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0006 a0001c0001t0008g0007 a0001c0001t0008g0008 others(3): Show a0001c0001t0008g0006 a0001c0001t0008g0007 a0001c0001t0008g0008 a0001c0001t0008g0009 a0001c0001t0008g0060 a0001c0001t0008g0234	6	336	0.0179	17	c.206 others(36): Show c.2064+5478_2064+5494dupTTGTTGGTTTAAAGTCT	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX15_chr11_65022439_65045572	65025779	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02109.hp2 HG02818.hp1 others(9): Show HG01243.hp1 HG02109.hp2 HG02818.hp1 HG02896.hp2 HG02897.hp2 HG03041.hp1 HG03195.hp2 HG03225.hp2 HG03486.hp2 NA18906.hp1 NA18957.hp1 NA19058.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0007	a0001c0001 a0001c0002 a0003c0004 others(2): Show a0001c0001 a0001c0002 a0003c0004 a0004c0005 a0007c0009	a0001c0001t0004 a0001c0002t0004 a0003c0004t0003 others(2): Show a0001c0001t0004 a0001c0002t0004 a0003c0004t0003 a0004c0005t0004 a0007c0009t0004	a0001c0001t0004g0122 a0001c0001t0004g0136 a0001c0001t0004g0137 others(8): Show a0001c0001t0004g0122 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0143 a0001c0002t0004g0028 a0003c0004t0003g0005 a0003c0004t0003g0019 a0003c0004t0003g0031 a0003c0004t0003g0083 a0004c0005t0004g0020 a0007c0009t0004g0115	12	157	0.0764	17	c.-17 others(28): Show c.-1759_-1758insTTTTTTTTTTTTTTTTT	SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding		1659		chr11	TogoVar
SNX15_chr11_65022439_65045572	65039029	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG03041.hp1 HG02897.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0122 a0001c0001t0004g0136 a0001c0001t0004g0122 a0001c0001t0004g0136	2	158	0.0127	17	c.922 others(32): Show c.922+203_922+219dupTTTTTTTTTTTTTTTTT	SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX18_chr5_54512759_54551586	54513684	T T	TTATATAT others(10): Show TTATATATAATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0002 a0001c0016t0002	a0001c0016t0002g0079 a0001c0016t0002g0079	1	293	0.0034	17	c.-42 others(28): Show c.-4269_-4268insTATATATAATATATATA	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		4074		chr5	TogoVar
SNX18_chr5_54512759_54551586	54513884	T T	TATATATA others(10): Show TATATATAAATTTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp2 HG03017.hp2 HG03831.hp2 HG02683.hp2 HG03017.hp2 HG03831.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0007 a0001c0003t0005 a0001c0003t0007	a0001c0003t0005g0005 a0001c0003t0007g0005 a0001c0003t0005g0005 a0001c0003t0007g0005	3	387	0.0078	17	c.-40 others(28): Show c.-4069_-4068insATATATAAATTTATATA	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		3874		chr5	TogoVar
SNX1_chr15_64090982_64149231	64140983	T T	TAGATAGA others(10): Show TAGATAGATAGATAGATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01515.hp1 HG02056.hp2 HG02451.hp2 others(13): Show HG01515.hp1 HG02056.hp2 HG02451.hp2 HG02622.hp1 HG02630.hp2 HG02735.hp2 HG02965.hp2 HG03130.hp1 HG06807.hp1 NA18950.hp1 NA18957.hp1 NA18959.hp1 NA18961.hp1 NA18974.hp2 NA19030.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0002 a0001c0001t0019 a0001c0001t0023 others(6): Show a0001c0001t0002 a0001c0001t0019 a0001c0001t0023 a0001c0002t0001 a0001c0002t0004 a0001c0002t0011 a0001c0002t0015 a0001c0002t0042 a0001c0007t0001	a0001c0001t0002g0173 a0001c0001t0019g0135 a0001c0001t0023g0175 others(13): Show a0001c0001t0002g0173 a0001c0001t0019g0135 a0001c0001t0023g0175 a0001c0002t0001g0002 a0001c0002t0001g0030 a0001c0002t0001g0038 a0001c0002t0001g0058 a0001c0002t0001g0069 a0001c0002t0004g0205 a0001c0002t0004g0224 a0001c0002t0004g0227 a0001c0002t0011g0128 a0001c0002t0015g0211 a0001c0002t0015g0213 a0001c0002t0042g0070 a0001c0007t0001g0059	16	41	0.3902	17	c.33 others(28): Show c.3365_*3366insAGATAGATAGATAGATA	SNX1	ENSG00000028528.15	transcript	ENST00000559844.6	protein_coding	15/15	3366		chr15	TogoVar
SNX25_chr4_185204598_185368966	185212491	G G	GTGTGTGT others(10): Show GTGTGTGTGTGTTTGTTT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0180	1	73	0.0137	17	c.429 others(34): Show c.429+2237_429+2238insGTGTGTGTGTTTGTTTT	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX25_chr4_185204598_185368966	185212491	G G	GTGTGTGT others(10): Show GTGTGTGTGTTTTTGTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02040.hp1 HG02080.hp2 others(25): Show HG01192.hp2 HG02040.hp1 HG02080.hp2 HG02280.hp1 HG02572.hp2 HG02615.hp1 HG02735.hp2 HG03130.hp1 HG03669.hp1 NA18612.hp1 NA18941.hp2 NA18943.hp1 NA18951.hp1 NA18954.hp1 NA18971.hp2 NA18985.hp1 NA18988.hp2 NA18992.hp2 NA18993.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp2 NA19054.hp1 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19074.hp1 NA19085.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0001c0003 a0001c0006 others(2): Show a0001c0001 a0001c0003 a0001c0006 a0003c0007 a0008c0018	a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 others(2): Show a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 a0003c0007t0001 a0008c0018t0001	a0001c0001t0001g0001 a0001c0001t0001g0064 a0001c0001t0001g0065 others(24): Show a0001c0001t0001g0001 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0003t0001g0060 a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0066 a0001c0003t0001g0067 a0001c0003t0001g0155 a0001c0003t0001g0163 a0001c0003t0001g0179 a0001c0006t0001g0068 a0001c0006t0001g0069 a0003c0007t0001g0070 a0008c0018t0001g0061	28	100	0.2800	17	c.429 others(34): Show c.429+2237_429+2238insGTGTGTGTTTTTGTTTT	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151681235	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02004.hp1 HG00438.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0260 a0001c0001t0013g0263 a0001c0001t0013g0260 a0001c0001t0013g0263	2	120	0.0167	17	c.115 others(36): Show c.1150-2113_1150-2097dupTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	12013500	A A	AAAAAAAA others(10): Show AAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0025 a0001c0025	a0001c0025t0094 a0001c0025t0094	a0001c0025t0094g0077 a0001c0025t0094g0077	1	54	0.0185	17	c.122 others(36): Show c.122+10458_122+10459insAAAAAAAAAAATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr16	TogoVar

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