Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LAMA5_chr20_62304065_62372312	62349805	T T	TGGTGGGG others(11): Show TGGTGGGGGTGGGGGTGGG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02135.hp1 NA20752.hp2 HG00642.hp2 HG02135.hp1 NA20752.hp2	a0034 a0046 a0076 a0034 a0046 a0076	a0034c0106 a0046c0105 a0076c0111 a0034c0106 a0046c0105 a0076c0111	a0034c0106t0001 a0046c0105t0001 a0076c0111t0001 a0034c0106t0001 a0046c0105t0001 a0076c0111t0001	a0034c0106t0001g0154 a0046c0105t0001g0140 a0076c0111t0001g0116 a0034c0106t0001g0154 a0046c0105t0001g0140 a0076c0111t0001g0116	3	186	0.0161	18	c.956 others(35): Show c.956+1898_956+1899insCCCACCCCCACCCCCACC	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	6/79			chr20	TogoVar
LAMB1_chr7_107918799_108008161	107935347	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0032 a0001c0032	a0001c0032t0001 a0001c0032t0001	a0001c0032t0001g0028 a0001c0032t0001g0028	1	364	0.0028	18	c.418 others(33): Show c.4188+50_4188+67dupAAAAAAAAAAAAAAAAAA	LAMB1	ENSG00000091136.15	transcript	ENST00000222399.11	protein_coding	27/33			chr7	TogoVar
LAMB1_chr7_107918799_108008161	107976861	T T	TTCCTTCC others(11): Show TTCCTTCCTTTCCTCTCCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp2 others(122): Show HG00099.hp1 HG00140.hp2 HG00323.hp2 HG00438.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG02004.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp1 HG02145.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02486.hp2 HG02615.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03831.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG06807.hp2 NA18612.hp1 NA18939.hp2 NA18945.hp2 NA18946.hp1 NA18949.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp2 NA18960.hp1 NA18962.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18981.hp1 NA18982.hp1 NA18988.hp1 NA18989.hp1 NA18995.hp2 NA18998.hp1 NA19003.hp1 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19076.hp1 NA19080.hp1 NA19081.hp1 NA19082.hp1 NA19087.hp1 NA19240.hp2 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0006 a0008 a0009 a0010 a0012 a0022 a0026 a0029 a0030	a0001c0001 a0001c0002 a0001c0005 others(26): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0007 a0001c0029 a0001c0042 a0001c0043 a0001c0059 a0001c0063 a0001c0072 a0002c0003 a0002c0010 a0002c0021 a0002c0052 a0002c0054 a0003c0004 a0003c0049 a0003c0050 a0006c0011 a0008c0023 a0009c0070 a0009c0071 a0010c0062 a0012c0075 a0022c0030 a0026c0060 a0029c0046 a0030c0074	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0005t0001 a0001c0006t0001 a0001c0006t0002 a0001c0007t0001 a0001c0029t0001 a0001c0042t0001 a0001c0043t0001 a0001c0059t0001 a0001c0063t0001 a0001c0072t0001 a0002c0003t0001 a0002c0003t0002 a0002c0010t0001 a0002c0021t0002 a0002c0052t0002 a0002c0054t0001 a0003c0004t0001 a0003c0049t0001 a0003c0050t0002 a0006c0011t0002 a0008c0023t0001 a0009c0070t0001 a0009c0071t0001 a0010c0062t0002 a0012c0075t0001 a0022c0030t0001 a0026c0060t0001 a0029c0046t0002 a0030c0074t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0011 others(121): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0022 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0100 a0001c0001t0001g0111 a0001c0001t0001g0131 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0183 a0001c0001t0001g0201 a0001c0001t0001g0287 a0001c0001t0001g0289 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0321 a0001c0001t0001g0335 a0001c0001t0001g0342 a0001c0001t0002g0003 a0001c0001t0002g0019 a0001c0001t0002g0050 a0001c0001t0002g0061 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0002t0001g0014 a0001c0002t0001g0049 a0001c0002t0001g0052 a0001c0002t0001g0055 a0001c0002t0001g0057 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0077 a0001c0002t0001g0078 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0110 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0002t0001g0132 a0001c0002t0001g0196 a0001c0002t0001g0199 a0001c0002t0001g0286 a0001c0002t0001g0295 a0001c0002t0001g0297 a0001c0002t0001g0298 a0001c0002t0001g0310 a0001c0002t0001g0328 a0001c0002t0001g0331 a0001c0005t0001g0035 a0001c0005t0001g0059 a0001c0005t0001g0114 a0001c0005t0001g0119 a0001c0005t0001g0129 a0001c0005t0001g0150 a0001c0005t0001g0190 a0001c0005t0001g0329 a0001c0005t0001g0351 a0001c0005t0001g0357 a0001c0006t0001g0128 a0001c0006t0001g0133 a0001c0006t0001g0341 a0001c0006t0001g0356 a0001c0006t0001g0358 a0001c0006t0002g0116 a0001c0007t0001g0115 a0001c0007t0001g0124 a0001c0007t0001g0125 a0001c0007t0001g0126 a0001c0007t0001g0130 a0001c0007t0001g0343 a0001c0029t0001g0311 a0001c0042t0001g0112 a0001c0043t0001g0127 a0001c0059t0001g0041 a0001c0063t0001g0324 a0001c0072t0001g0025 a0002c0003t0001g0284 a0002c0003t0001g0291 a0002c0003t0002g0010 a0002c0003t0002g0017 a0002c0003t0002g0054 a0002c0003t0002g0075 a0002c0003t0002g0076 a0002c0003t0002g0113 a0002c0003t0002g0120 a0002c0003t0002g0121 a0002c0003t0002g0198 a0002c0003t0002g0285 a0002c0003t0002g0288 a0002c0003t0002g0301 a0002c0010t0001g0044 a0002c0010t0001g0180 a0002c0021t0002g0066 a0002c0052t0002g0160 a0002c0054t0001g0181 a0003c0004t0001g0079 a0003c0004t0001g0080 a0003c0004t0001g0081 a0003c0004t0001g0082 a0003c0004t0001g0148 a0003c0004t0001g0157 a0003c0004t0001g0158 a0003c0004t0001g0191 a0003c0049t0001g0056 a0003c0050t0002g0146 a0006c0011t0002g0058 a0006c0011t0002g0060 a0008c0023t0001g0051 a0008c0023t0001g0053 a0009c0070t0001g0348 a0009c0071t0001g0067 a0010c0062t0002g0293 a0012c0075t0001g0043 a0022c0030t0001g0312 a0026c0060t0001g0036 a0029c0046t0002g0333 a0030c0074t0001g0200	125	364	0.3434	18	c.100 others(35): Show c.1001-985_1001-984insGGGAGAGGAAAGGAAGGA	LAMB1	ENSG00000091136.15	transcript	ENST00000222399.11	protein_coding	9/33			chr7	TogoVar
LAMB1_chr7_107918799_108008161	107976948	C C	CCTCCTTC others(11): Show CCTCCTTCCTTCCTTTCCT	intron_variant intron_variant	MODIFIER	HG00733.hp1 NA18962.hp2 NA19057.hp1 HG00733.hp1 NA18962.hp2 NA19057.hp1	a0001 a0002 a0027 a0001 a0002 a0027	a0001c0002 a0002c0003 a0027c0061 a0001c0002 a0002c0003 a0027c0061	a0001c0002t0001 a0002c0003t0002 a0027c0061t0001 a0001c0002t0001 a0002c0003t0002 a0027c0061t0001	a0001c0002t0001g0122 a0002c0003t0002g0013 a0027c0061t0001g0123 a0001c0002t0001g0122 a0002c0003t0002g0013 a0027c0061t0001g0123	3	364	0.0082	18	c.100 others(37): Show c.1000+1081_1001-1072dupAGGAAAGGAAGGAAGGAG	LAMB1	ENSG00000091136.15	transcript	ENST00000222399.11	protein_coding	9/33			chr7	TogoVar
LAMC1_chr1_183018420_183150592	183077776	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02280.hp1 HG02809.hp2 HG02109.hp1 HG02280.hp1 HG02809.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0104 a0001c0005t0004g0106 a0001c0005t0004g0107 a0001c0005t0004g0104 a0001c0005t0004g0106 a0001c0005t0004g0107	3	308	0.0097	18	c.419 others(37): Show c.419-25549_419-25532dupTATATATATATATATATA	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAMC1_chr1_183018420_183150592	183077776	G G	GTGTGTGT others(11): Show GTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0036 a0001c0002t0002g0036	1	308	0.0033	18	c.419 others(37): Show c.419-25551_419-25550insGTGTGTGTATATATATAT	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAMC1_chr1_183018420_183150592	183140245	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0108 a0001c0005t0004g0108	1	308	0.0033	18	c.447 others(35): Show c.4474-156_4474-139dupAAAAAAAAAAAAAAAAAA	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	26/27		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAMC3_chr9_131004174_131099473	131012048	A A	AACACACA others(11): Show AACACACACACACACATAC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0058 a0058	a0058c0211 a0058c0211	a0058c0211t0002 a0058c0211t0002	a0058c0211t0002g0355 a0058c0211t0002g0355	1	360	0.0028	18	c.373 others(35): Show c.373+2474_373+2475insCATACACACACACACACA	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131022215	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00639.hp1 HG00639.hp2 others(23): Show HG00558.hp2 HG00639.hp1 HG00639.hp2 HG00741.hp1 HG01099.hp2 HG01255.hp2 HG01358.hp1 HG02015.hp2 HG02040.hp2 HG02132.hp1 HG02293.hp2 HG02602.hp2 HG02723.hp1 HG04204.hp1 NA18943.hp2 NA18946.hp1 NA18956.hp1 NA18982.hp2 NA18994.hp2 NA18999.hp1 NA19002.hp2 NA19004.hp1 NA19063.hp1 NA19065.hp2 NA19084.hp1 NA19091.hp2	a0005 a0019 a0021 others(7): Show a0005 a0019 a0021 a0023 a0030 a0036 a0043 a0045 a0087 a0088	a0005c0001 a0005c0036 a0019c0009 others(12): Show a0005c0001 a0005c0036 a0019c0009 a0019c0060 a0019c0076 a0021c0031 a0023c0034 a0023c0073 a0030c0068 a0030c0069 a0036c0158 a0043c0033 a0045c0035 a0087c0072 a0088c0077	a0005c0001t0001 a0005c0036t0001 a0005c0036t0013 others(13): Show a0005c0001t0001 a0005c0036t0001 a0005c0036t0013 a0019c0009t0001 a0019c0060t0001 a0019c0076t0001 a0021c0031t0007 a0023c0034t0002 a0023c0073t0002 a0030c0068t0002 a0030c0069t0002 a0036c0158t0001 a0043c0033t0003 a0045c0035t0002 a0087c0072t0001 a0088c0077t0013	a0005c0001t0001g0086 a0005c0001t0001g0118 a0005c0001t0001g0129 others(23): Show a0005c0001t0001g0086 a0005c0001t0001g0118 a0005c0001t0001g0129 a0005c0001t0001g0249 a0005c0001t0001g0253 a0005c0001t0001g0254 a0005c0001t0001g0255 a0005c0001t0001g0256 a0005c0036t0001g0113 a0005c0036t0013g0121 a0019c0009t0001g0248 a0019c0009t0001g0257 a0019c0009t0001g0258 a0019c0009t0001g0259 a0019c0060t0001g0251 a0019c0076t0001g0053 a0021c0031t0007g0036 a0023c0034t0002g0112 a0023c0073t0002g0345 a0030c0068t0002g0150 a0030c0069t0002g0252 a0036c0158t0001g0116 a0043c0033t0003g0085 a0045c0035t0002g0120 a0087c0072t0001g0119 a0088c0077t0013g0117	26	360	0.0722	18	c.374 others(35): Show c.374-4058_374-4041dupCACACACACACACACACA	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMP1_chr13_113292239_113328672	113296599	G G	GCACCTTC others(11): Show GCACCTTCACCTTCACCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	354	0.0028	18	c.-83 others(27): Show c.-836_-835insCACCTTCACCTTCACCTT	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding		639		chr13	TogoVar
LAMP3_chr3_183117215_183167734	183149574	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG03041.hp2 NA18994.hp2 others(1): Show HG02071.hp2 HG03041.hp2 NA18994.hp2 NA19077.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0033 a0001c0003t0002g0036 a0001c0003t0002g0064 others(1): Show a0001c0003t0002g0033 a0001c0003t0002g0036 a0001c0003t0002g0064 a0001c0003t0002g0070	4	372	0.0108	18	c.888 others(35): Show c.888+2800_888+2801insATATATATATATATTTTT	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	3/5			chr3	TogoVar
LAMP3_chr3_183117215_183167734	183156364	A A	AAACAACA others(11): Show AAACAACAACAACAACAAC	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0083 a0001c0001t0020g0083	1	372	0.0027	18	c.50- others(33): Show c.50-1991_50-1974dupGTTGTTGTTGTTGTTGTT	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	1/5			chr3	TogoVar
LAMP5_chr20_9509590_9535524	9509990	A A	AAACAAAA others(11): Show AAACAAAAAAAAAAAAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0125 a0001c0001t0003g0125	1	448	0.0022	18	c.-48 others(29): Show c.-4863_-4862insAACAAAAAAAAAAAAAAC	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding		4599		chr20	TogoVar
LAMP5_chr20_9509590_9535524	9509992	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAACAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02451.hp2 HG03130.hp1 others(1): Show HG01243.hp2 HG02451.hp2 HG03130.hp1 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0007 a0002c0002t0001g0352 a0002c0002t0001g0353 others(1): Show a0001c0001t0001g0007 a0002c0002t0001g0352 a0002c0002t0001g0353 a0002c0002t0001g0354	4	448	0.0089	18	c.-48 others(29): Show c.-4861_-4860insAAAAAAAAAAAAAAACAA	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding		4597		chr20	TogoVar
LAMP5_chr20_9509590_9535524	9515154	G G	GTGAGGTC others(11): Show GTGAGGTCAGAGCATTGGC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01243.hp2 HG02451.hp2 others(2): Show HG01106.hp2 HG01243.hp2 HG02451.hp2 HG02559.hp2 HG03130.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0355 a0001c0001t0002g0356 a0002c0002t0001g0352 others(2): Show a0001c0001t0002g0355 a0001c0001t0002g0356 a0002c0002t0001g0352 a0002c0002t0001g0353 a0002c0002t0001g0354	5	448	0.0112	18	c.64+ others(31): Show c.64+239_64+256dupTGAGGTCAGAGCATTGGC	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr20	TogoVar
LAMP5_chr20_9509590_9535524	9517621	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02809.hp1 HG03139.hp2 others(4): Show HG01891.hp2 HG02809.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03516.hp2 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0017 a0002c0002t0001 a0002c0002t0017	a0002c0002t0001g0054 a0002c0002t0001g0346 a0002c0002t0001g0347 others(3): Show a0002c0002t0001g0054 a0002c0002t0001g0346 a0002c0002t0001g0347 a0002c0002t0001g0348 a0002c0002t0001g0349 a0002c0002t0017g0359	7	448	0.0156	18	c.476 others(33): Show c.476-404_476-403insGTGTGTGTGTGTGTGTGT	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr20	TogoVar
LANCL2_chr7_55360337_55438737	55415621	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(101): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00597.hp2 HG00609.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp2 HG01192.hp2 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01891.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02074.hp1 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02258.hp2 HG02280.hp1 HG02300.hp1 HG02523.hp1 HG02523.hp2 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03139.hp1 HG03225.hp1 HG03471.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG04115.hp2 HG04184.hp2 HG04228.hp1 NA18747.hp2 NA18941.hp1 NA18945.hp1 NA18945.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp2 NA18975.hp1 NA18980.hp2 NA18988.hp2 NA18993.hp1 NA18997.hp2 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19058.hp1 NA19060.hp1 NA19063.hp2 NA19065.hp2 NA19074.hp2 NA19079.hp1 NA19084.hp2 NA19086.hp2 NA19088.hp1 NA19089.hp2 NA19090.hp1 NA21309.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0011 a0002c0003 a0004c0006 a0005c0010	a0001c0001t0001 a0001c0001t0011 a0001c0001t0015 others(10): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0002t0006 a0001c0002t0012 a0001c0002t0020 a0001c0004t0006 a0001c0011t0001 a0002c0003t0002 a0004c0006t0006 a0005c0010t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0198 others(96): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0262 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0011g0263 a0001c0001t0015g0226 a0001c0001t0016g0310 a0001c0001t0017g0200 a0001c0001t0017g0202 a0001c0002t0006g0155 a0001c0002t0012g0093 a0001c0002t0012g0094 a0001c0002t0020g0089 a0001c0004t0006g0176 a0001c0004t0006g0177 a0001c0004t0006g0178 a0001c0004t0006g0181 a0001c0004t0006g0184 a0001c0004t0006g0185 a0001c0004t0006g0187 a0001c0004t0006g0188 a0001c0004t0006g0190 a0001c0004t0006g0191 a0001c0004t0006g0193 a0001c0011t0001g0285 a0002c0003t0002g0071 a0004c0006t0006g0179 a0004c0006t0006g0180 a0005c0010t0001g0250	104	352	0.2955	18	c.100 others(37): Show c.1008+3540_1008+3541insTTTTTTTTTTTTTTTTTT	LANCL2	ENSG00000132434.10	transcript	ENST00000254770.3	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
LANCL2_chr7_55360337_55438737	55436600	A A	ATGAGTGT others(11): Show ATGAGTGTGTGTGCATGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG02300.hp2 HG00280.hp2 HG02300.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0001 a0002c0003t0002g0008 a0002c0003t0002g0001 a0002c0003t0002g0008	2	352	0.0057	18	c.52 others(29): Show c.5280_*5281insTGAGTGTGTGTGCATGAG	LANCL2	ENSG00000132434.10	transcript	ENST00000254770.3	protein_coding		2864		chr7	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0003 a0001c0001t0004g0003	1	300	0.0033	18	c.-37 others(29): Show c.-3736_-3735insTGTGTGTGTGTGTATATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0003 a0001c0001t0004g0003	1	300	0.0033	18	c.-37 others(29): Show c.-3736_-3735insTGTGTGTGTGTGTGTATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAPTM4B_chr8_97770788_97858013	97781278	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03579.hp2 HG03486.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0027 a0001c0001t0006 a0001c0001t0027	a0001c0001t0006g0005 a0001c0001t0027g0302 a0001c0001t0006g0005 a0001c0001t0027g0302	2	380	0.0053	18	c.99+ others(33): Show c.99+5174_99+5191dupTTTTTTTTTTTTTTTTTT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850465	G G	GGGGTGTG others(11): Show GGGGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02145.hp1 HG02809.hp2 others(3): Show HG01891.hp2 HG02145.hp1 HG02809.hp2 HG03130.hp1 HG03471.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0018 a0001c0001t0006 a0001c0002t0018	a0001c0001t0006g0005 a0001c0001t0006g0006 a0001c0001t0006g0008 others(3): Show a0001c0001t0006g0005 a0001c0001t0006g0006 a0001c0001t0006g0008 a0001c0001t0006g0009 a0001c0001t0006g0365 a0001c0002t0018g0243	6	380	0.0158	18	c.604 others(33): Show c.604-931_604-930insGGTGTGTGTGTGTGTGTG	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850465	G G	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0162 a0001c0001t0006g0162	1	380	0.0026	18	c.604 others(33): Show c.604-925_604-908dupGTGTGTGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850474	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00741.hp2 HG01123.hp2 others(14): Show HG00735.hp2 HG00741.hp2 HG01123.hp2 HG01192.hp2 HG01258.hp1 HG01943.hp2 HG01975.hp2 HG02004.hp1 HG02273.hp1 HG02293.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02970.hp1 HG03579.hp1 HG04199.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0007 a0001c0001t0029 others(3): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0029 a0001c0001t0030 a0001c0002t0009 a0001c0002t0021	a0001c0001t0003g0041 a0001c0001t0003g0051 a0001c0001t0003g0074 others(14): Show a0001c0001t0003g0041 a0001c0001t0003g0051 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0087 a0001c0001t0003g0111 a0001c0001t0003g0126 a0001c0001t0003g0309 a0001c0001t0003g0371 a0001c0001t0003g0373 a0001c0001t0007g0228 a0001c0001t0029g0374 a0001c0001t0030g0066 a0001c0002t0009g0380 a0001c0002t0021g0242 a0001c0002t0021g0245	17	380	0.0447	18	c.604 others(33): Show c.604-908_604-907insGTATGTGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850476	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01891.hp1 HG02896.hp2 others(1): Show HG00438.hp1 HG01891.hp1 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0010g0225 others(1): Show a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0010g0225 a0001c0001t0010g0231	4	380	0.0105	18	c.604 others(33): Show c.604-908_604-907insGTGTATGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LARGE1_chr22_33267509_33925476	33396463	C C	CAGAGAGA others(11): Show CAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02647.hp2 HG02886.hp2 others(6): Show HG01070.hp2 HG02647.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 NA18906.hp1 NA18906.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0010 others(1): Show a0001c0001 a0001c0003 a0002c0010 a0002c0018	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0033 a0001c0003t0011 a0002c0010t0008 a0002c0018t0008	a0001c0001t0002g0096 a0001c0001t0004g0010 a0001c0001t0004g0045 others(6): Show a0001c0001t0002g0096 a0001c0001t0004g0010 a0001c0001t0004g0045 a0001c0001t0006g0052 a0001c0001t0007g0070 a0001c0001t0033g0110 a0001c0003t0011g0063 a0002c0010t0008g0054 a0002c0018t0008g0068	9	110	0.0818	18	c.893 others(37): Show c.893-12177_893-12160dupCTCTCTCTCTCTCTCTCT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	7/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33441071	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp2 NA20129.hp1 HG03471.hp2 NA20129.hp1	a0001 a0001	a0001c0007 a0001c0017 a0001c0007 a0001c0017	a0001c0007t0010 a0001c0017t0009 a0001c0007t0010 a0001c0017t0009	a0001c0007t0010g0006 a0001c0017t0009g0083 a0001c0007t0010g0006 a0001c0017t0009g0083	2	110	0.0182	18	c.788 others(35): Show c.788-8824_788-8807dupAAAAAAAAAAAAAAAAAA	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33466693	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03041.hp2 NA18906.hp2 HG03041.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0004 a0001c0004t0013 a0001c0001t0004 a0001c0004t0013	a0001c0001t0004g0010 a0001c0004t0013g0102 a0001c0001t0004g0010 a0001c0004t0013g0102	2	110	0.0182	18	c.788 others(37): Show c.788-34446_788-34429dupGTGTGTGTGTGTGTGTGT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33513812	T T	TACACACA others(11): Show TACACACACACACATACAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02559.hp1 HG02922.hp2 others(1): Show HG02258.hp1 HG02559.hp1 HG02922.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0007 a0002c0010 a0001c0002 a0001c0007 a0002c0010	a0001c0002t0006 a0001c0007t0004 a0001c0007t0010 others(1): Show a0001c0002t0006 a0001c0007t0004 a0001c0007t0010 a0002c0010t0008	a0001c0002t0006g0080 a0001c0007t0004g0061 a0001c0007t0010g0006 others(1): Show a0001c0002t0006g0080 a0001c0007t0004g0061 a0001c0007t0010g0006 a0002c0010t0008g0054	4	110	0.0364	18	c.787 others(37): Show c.787+51035_787+51036insGTGTATGTGTGTGTGTGT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33544684	A A	AAACAACA others(11): Show AAACAACAACAACAACAAC	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02280.hp1 HG03710.hp2 others(1): Show HG01255.hp2 HG02280.hp1 HG03710.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0023 a0001c0002t0001 others(1): Show a0001c0001t0003 a0001c0001t0023 a0001c0002t0001 a0001c0002t0003	a0001c0001t0003g0050 a0001c0001t0023g0090 a0001c0002t0001g0038 others(1): Show a0001c0001t0003g0050 a0001c0001t0023g0090 a0001c0002t0001g0038 a0001c0002t0003g0003	4	110	0.0364	18	c.787 others(37): Show c.787+20163_787+20164insGTTGTTGTTGTTGTTGTT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33545419	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0072	1	110	0.0091	18	c.787 others(37): Show c.787+19411_787+19428dupGTGTGTGTGTGTGTGTGT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	6/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33651225	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0074 a0001c0001t0017g0074	1	110	0.0091	18	c.107 others(33): Show c.107-558_107-557insTTTTTTTTTTTTTTTTTT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33878129	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0055 a0001c0002t0001g0055	1	110	0.0091	18	c.-83 others(37): Show c.-83+41848_-83+41865dupAAAAAAAAAAAAAAAAAA	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14			chr22	TogoVar
LARP1B_chr4_128056312_128216988	128098747	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0120 a0002c0002t0002g0120	1	336	0.0030	18	c.813 others(33): Show c.813+421_813+438dupATATATATATATATATAT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128098767	A A	ATATATAT others(11): Show ATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG03195.hp2 NA18747.hp1 NA18979.hp2 HG03195.hp2 NA18747.hp1 NA18979.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0047 a0002c0002t0002g0085 a0002c0002t0002g0291 a0002c0002t0002g0047 a0002c0002t0002g0085 a0002c0002t0002g0291	3	336	0.0089	18	c.813 others(33): Show c.813+438_813+439insATATATATATATATATTT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128098767	A A	ATATATAT others(11): Show ATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA19012.hp2 NA19012.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0114 a0002c0002t0002g0114	1	336	0.0030	18	c.813 others(33): Show c.813+438_813+439insATATATATATATATTTTT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128110676	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01433.hp1 HG02055.hp2 others(6): Show HG01109.hp1 HG01433.hp1 HG02055.hp2 HG02071.hp2 HG02809.hp2 HG02818.hp1 HG03041.hp2 HG03098.hp1 NA18943.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0021 a0002c0002t0002g0029 a0002c0002t0002g0092 others(6): Show a0002c0002t0002g0021 a0002c0002t0002g0029 a0002c0002t0002g0092 a0002c0002t0002g0094 a0002c0002t0002g0095 a0002c0002t0002g0117 a0002c0002t0002g0130 a0002c0002t0002g0287 a0002c0002t0002g0329	9	336	0.0268	18	c.988 others(35): Show c.988+3380_988+3381insAAAAAAAAAAAAAAAAAA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128143796	G G	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG00438.hp1 others(23): Show HG00099.hp2 HG00408.hp2 HG00438.hp1 HG00558.hp1 HG00639.hp2 HG01106.hp2 HG01192.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp1 HG02083.hp2 HG02132.hp1 HG02572.hp2 HG02886.hp1 HG03130.hp1 HG03669.hp1 HG03704.hp2 HG03831.hp2 HG04199.hp2 NA18970.hp2 NA18985.hp1 NA19004.hp2 NA19056.hp1 NA19062.hp1 NA19068.hp2	a0001 a0009 a0011 a0001 a0009 a0011	a0001c0001 a0001c0018 a0009c0010 others(1): Show a0001c0001 a0001c0018 a0009c0010 a0011c0016	a0001c0001t0001 a0001c0001t0003 a0001c0018t0003 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0018t0003 a0009c0010t0003 a0011c0016t0003	a0001c0001t0001g0107 a0001c0001t0001g0149 a0001c0001t0001g0155 others(23): Show a0001c0001t0001g0107 a0001c0001t0001g0149 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0211 a0001c0001t0001g0259 a0001c0001t0001g0266 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0215 a0001c0001t0003g0220 a0001c0001t0003g0231 a0001c0001t0003g0233 a0001c0001t0003g0238 a0001c0001t0003g0240 a0001c0001t0003g0242 a0001c0001t0003g0247 a0001c0001t0003g0251 a0001c0001t0003g0255 a0001c0001t0003g0279 a0001c0001t0003g0280 a0001c0018t0003g0254 a0009c0010t0003g0223 a0011c0016t0003g0277	26	336	0.0774	18	c.152 others(39): Show c.1525-18393_1525-18376dupGTGTGTGTGTGTGTGTGT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128178035	G G	GATATATA others(11): Show GATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0317 a0001c0001t0004g0317	1	336	0.0030	18	c.168 others(35): Show c.1685-388_1685-371dupTATATATATATATATATA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	13/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP4B_chr10_804497_936705	931965	A A	ACGTCCGC others(11): Show ACGTCCGCCCCGCCCGCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp2 HG02148.hp1 NA18946.hp2 HG01928.hp2 HG02148.hp1 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0152 a0001c0001t0002g0156 a0001c0001t0002g0201 a0001c0001t0002g0152 a0001c0001t0002g0156 a0001c0001t0002g0201	3	288	0.0104	18	c.-57 others(27): Show c.-578_-577insGGGCGGGCGGGGCGGACG	LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding		261		chr10	TogoVar
LARP4B_chr10_804497_936705	931968	T T	TCCGCCCC others(11): Show TCCGCCCCGCCCGCCCCGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18986.hp1 NA18972.hp2 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0002 a0001c0001t0009	a0001c0001t0002g0210 a0001c0001t0009g0096 a0001c0001t0002g0210 a0001c0001t0009g0096	2	288	0.0069	18	c.-58 others(27): Show c.-581_-580insGCGGGGCGGGCGGGGCGG	LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding		264		chr10	TogoVar
LARP4_chr12_50395885_50485004	50426684	G G	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02083.hp1 HG00673.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0107 a0001c0001t0002g0127 a0001c0001t0002g0107 a0001c0001t0002g0127	2	318	0.0063	18	c.19- others(33): Show c.19-1048_19-1031dupTGTGTGTGTGTGTGTGTG	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50446409	C C	CTATATAT others(11): Show CTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	318	0.0031	18	c.804 others(35): Show c.804+4770_804+4787dupATATATATATATATATAT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50446429	A A	ATATATAT others(11): Show ATATATATATATATATGTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0170 a0001c0001t0004g0170	1	318	0.0031	18	c.804 others(35): Show c.804+4787_804+4788insATATATATATATATGTTT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50446429	A A	ATATATAT others(11): Show ATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0237	1	318	0.0031	18	c.804 others(35): Show c.804+4787_804+4788insATATATATATATATTTTT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP7_chr4_112632143_112662586	112657170	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02155.hp2 HG02886.hp1 others(11): Show HG00558.hp2 HG02155.hp2 HG02886.hp1 HG02922.hp1 HG03486.hp1 HG06807.hp1 NA18522.hp2 NA18941.hp1 NA18965.hp1 NA18987.hp2 NA19006.hp1 NA19060.hp1 NA19072.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0019 a0001c0001t0001g0099 a0001c0001t0001g0107 others(8): Show a0001c0001t0001g0019 a0001c0001t0001g0099 a0001c0001t0001g0107 a0001c0001t0001g0125 a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0003g0219 a0001c0001t0003g0221 a0001c0001t0003g0223 a0001c0001t0003g0243 a0001c0001t0003g0254	14	420	0.0333	18	c.166 others(33): Show c.1669-63_1669-46dupGTGTGTGTGTGTGTGTGT	LARP7	ENSG00000174720.18	transcript	ENST00000344442.10	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARS1_chr5_146108034_146187650	146111100	T T	TATAATAA others(11): Show TATAATAATAATAATAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG02135.hp1 HG02683.hp1 others(10): Show HG01192.hp1 HG02135.hp1 HG02683.hp1 HG03491.hp2 HG03688.hp1 HG03942.hp1 NA18946.hp1 NA18982.hp1 NA18983.hp2 NA19007.hp1 NA19056.hp2 NA20752.hp2 NA20905.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0211 a0002c0002t0002g0213 a0002c0002t0002g0214 others(10): Show a0002c0002t0002g0211 a0002c0002t0002g0213 a0002c0002t0002g0214 a0002c0002t0002g0221 a0002c0002t0002g0225 a0002c0002t0002g0227 a0002c0002t0002g0230 a0002c0002t0002g0245 a0002c0002t0002g0253 a0002c0002t0002g0262 a0002c0002t0002g0263 a0002c0002t0002g0267 a0002c0002t0002g0271	13	284	0.0458	18	c.29 others(29): Show c.2988_*3005dupTATTATTATTATTATTAT	LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding		1933		chr5	TogoVar
LARS1_chr5_146108034_146187650	146186812	A A	AACACACA others(11): Show AACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0186 a0001c0003t0001g0186	1	284	0.0035	18	c.-43 others(29): Show c.-4320_-4319insGTGTGTGTGTGTGTGTGT	LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding		4163		chr5	TogoVar
LARS2_chr3_45383576_45554407	45484616	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0178 a0001c0004t0004g0178	1	242	0.0041	18	c.101 others(37): Show c.1019-1075_1019-1074insTATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484620	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01167.hp2 NA19090.hp1 HG01081.hp1 HG01167.hp2 NA19090.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0113 a0001c0002t0001g0116 a0001c0002t0001g0215 a0001c0002t0001g0113 a0001c0002t0001g0116 a0001c0002t0001g0215	3	242	0.0124	18	c.101 others(37): Show c.1019-1071_1019-1070insTATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar

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