Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LARS2_chr3_45383576_45554407	45484622	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01346.hp1 HG04115.hp1 HG01261.hp2 HG01346.hp1 HG04115.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0218 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0218	3	242	0.0124	18	c.101 others(37): Show c.1019-1069_1019-1068insTATATATATATATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484628	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03041.hp2 HG03209.hp1 HG02818.hp1 HG03041.hp2 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0011 a0001c0003 a0001c0011	a0001c0003t0005 a0001c0011t0001 a0001c0003t0005 a0001c0011t0001	a0001c0003t0005g0199 a0001c0003t0005g0201 a0001c0011t0001g0194 a0001c0003t0005g0199 a0001c0003t0005g0201 a0001c0011t0001g0194	3	242	0.0124	18	c.101 others(37): Show c.1019-1063_1019-1062insTATATATATATATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0151 a0001c0001t0009g0151	1	242	0.0041	18	c.101 others(37): Show c.1019-1061_1019-1060insAAAAAAAAAAAATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LAS1L_chrX_65507582_65539787	65525748	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp2 HG03130.hp1 others(2): Show HG02818.hp1 HG02818.hp2 HG03130.hp1 HG03579.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 others(2): Show a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0052	5	203	0.0246	18	c.957 others(33): Show c.957-716_957-699dupTTTTTTTTTTTTTTTTTT		LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding	7/13						chrX	TogoVar
LASP1_chr17_38865058_38926770	38875056	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00558.hp2 HG00609.hp2 others(35): Show HG00423.hp2 HG00558.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG02027.hp1 HG02056.hp2 HG02132.hp2 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG03139.hp1 HG03209.hp1 HG03927.hp1 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18941.hp1 NA18946.hp2 NA18952.hp1 NA18961.hp1 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18983.hp2 NA18988.hp2 NA18992.hp2 NA18999.hp1 NA19009.hp1 NA19054.hp1 NA19056.hp2 NA19057.hp2 NA19064.hp1 NA19079.hp1 NA19090.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0001t0004 a0001c0001t0023 others(14): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0023 a0001c0002t0002 a0001c0002t0003 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0004t0002 a0001c0004t0020 a0001c0005t0003 a0001c0006t0001 a0001c0006t0005 a0001c0006t0019 a0001c0007t0002 a0001c0009t0001	a0001c0001t0001g0201 a0001c0001t0001g0217 a0001c0001t0001g0218 others(35): Show a0001c0001t0001g0201 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0004g0245 a0001c0001t0023g0219 a0001c0002t0002g0206 a0001c0002t0002g0240 a0001c0002t0003g0191 a0001c0002t0003g0208 a0001c0002t0003g0209 a0001c0002t0003g0212 a0001c0003t0001g0202 a0001c0003t0001g0203 a0001c0003t0001g0204 a0001c0003t0001g0205 a0001c0003t0001g0214 a0001c0003t0001g0250 a0001c0003t0001g0379 a0001c0003t0002g0200 a0001c0003t0003g0199 a0001c0003t0005g0215 a0001c0004t0002g0213 a0001c0004t0002g0216 a0001c0004t0002g0222 a0001c0004t0002g0254 a0001c0004t0020g0042 a0001c0005t0003g0221 a0001c0006t0001g0210 a0001c0006t0005g0207 a0001c0006t0019g0211 a0001c0007t0002g0268 a0001c0007t0002g0378 a0001c0009t0001g0022 a0001c0009t0001g0023 a0001c0009t0001g0024	38	396	0.0960	18	c.70- others(33): Show c.70-3014_70-2997dupTGTGTGTGTGTGTGTGTG		LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr17	TogoVar
LASP1_chr17_38865058_38926770	38896088	A A	AGGGGCAA others(11): Show AGGGGCAAGCACTCCTGCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(143): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp1 HG02056.hp2 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02257.hp1 HG02258.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02698.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02922.hp1 HG02976.hp2 HG03017.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18940.hp1 NA18944.hp1 NA18946.hp1 NA18946.hp2 NA18950.hp2 NA18953.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18991.hp2 NA18992.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19003.hp2 NA19057.hp2 NA19064.hp1 NA19066.hp1 NA19074.hp2 NA19079.hp2 NA19083.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0009 a0001c0012 a0002c0014 a0003c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0014 a0001c0001t0028 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0015 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0003t0005 a0001c0003t0006 a0001c0003t0026 a0001c0004t0001 a0001c0004t0002 a0001c0004t0020 a0001c0004t0022 a0001c0005t0001 a0001c0005t0002 a0001c0005t0003 a0001c0007t0002 a0001c0008t0002 a0001c0009t0001 a0001c0009t0002 a0001c0012t0002 a0002c0014t0002 a0003c0015t0001	a0001c0001t0001g0160 a0001c0001t0001g0256 a0001c0001t0001g0264 others(141): Show a0001c0001t0001g0160 a0001c0001t0001g0256 a0001c0001t0001g0264 a0001c0001t0001g0306 a0001c0001t0001g0311 a0001c0001t0001g0341 a0001c0001t0001g0375 a0001c0001t0002g0027 a0001c0001t0002g0072 a0001c0001t0002g0126 a0001c0001t0002g0132 a0001c0001t0002g0142 a0001c0001t0002g0253 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0302 a0001c0001t0002g0312 a0001c0001t0002g0353 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0223 a0001c0001t0003g0342 a0001c0001t0004g0007 a0001c0001t0004g0008 a0001c0001t0004g0009 a0001c0001t0004g0267 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0010g0100 a0001c0001t0014g0269 a0001c0001t0028g0178 a0001c0002t0001g0155 a0001c0002t0002g0225 a0001c0002t0003g0057 a0001c0002t0003g0169 a0001c0002t0003g0292 a0001c0002t0003g0301 a0001c0002t0003g0303 a0001c0002t0003g0307 a0001c0002t0003g0316 a0001c0002t0015g0339 a0001c0003t0001g0002 a0001c0003t0001g0004 a0001c0003t0001g0015 a0001c0003t0001g0034 a0001c0003t0001g0036 a0001c0003t0001g0068 a0001c0003t0001g0099 a0001c0003t0001g0111 a0001c0003t0001g0112 a0001c0003t0001g0114 a0001c0003t0001g0117 a0001c0003t0001g0138 a0001c0003t0001g0156 a0001c0003t0001g0158 a0001c0003t0001g0171 a0001c0003t0001g0179 a0001c0003t0001g0202 a0001c0003t0001g0203 a0001c0003t0001g0204 a0001c0003t0001g0205 a0001c0003t0001g0214 a0001c0003t0001g0230 a0001c0003t0001g0241 a0001c0003t0001g0250 a0001c0003t0001g0273 a0001c0003t0001g0286 a0001c0003t0001g0294 a0001c0003t0001g0314 a0001c0003t0001g0361 a0001c0003t0001g0363 a0001c0003t0001g0379 a0001c0003t0002g0075 a0001c0003t0002g0076 a0001c0003t0002g0141 a0001c0003t0002g0200 a0001c0003t0002g0274 a0001c0003t0002g0288 a0001c0003t0003g0058 a0001c0003t0003g0199 a0001c0003t0004g0077 a0001c0003t0004g0082 a0001c0003t0004g0090 a0001c0003t0004g0113 a0001c0003t0004g0122 a0001c0003t0004g0123 a0001c0003t0004g0266 a0001c0003t0004g0334 a0001c0003t0004g0336 a0001c0003t0004g0337 a0001c0003t0004g0338 a0001c0003t0005g0215 a0001c0003t0006g0019 a0001c0003t0026g0121 a0001c0004t0001g0359 a0001c0004t0002g0130 a0001c0004t0002g0157 a0001c0004t0002g0172 a0001c0004t0002g0222 a0001c0004t0002g0370 a0001c0004t0002g0376 a0001c0004t0002g0377 a0001c0004t0020g0042 a0001c0004t0022g0152 a0001c0005t0001g0052 a0001c0005t0001g0147 a0001c0005t0002g0101 a0001c0005t0002g0115 a0001c0005t0002g0116 a0001c0005t0002g0118 a0001c0005t0002g0143 a0001c0005t0002g0145 a0001c0005t0002g0364 a0001c0005t0003g0041 a0001c0005t0003g0098 a0001c0005t0003g0221 a0001c0005t0003g0279 a0001c0005t0003g0280 a0001c0005t0003g0346 a0001c0005t0003g0380 a0001c0005t0003g0385 a0001c0007t0002g0268 a0001c0007t0002g0270 a0001c0007t0002g0378 a0001c0008t0002g0044 a0001c0008t0002g0045 a0001c0008t0002g0047 a0001c0008t0002g0048 a0001c0008t0002g0049 a0001c0008t0002g0050 a0001c0008t0002g0069 a0001c0008t0002g0070 a0001c0008t0002g0139 a0001c0008t0002g0146 a0001c0008t0002g0176 a0001c0008t0002g0255 a0001c0009t0001g0022 a0001c0009t0002g0025 a0001c0012t0002g0102 a0001c0012t0002g0103 a0002c0014t0002g0260 a0003c0015t0001g0386	146	396	0.3687	18	c.250 others(35): Show c.250-2323_250-2306dupGGGGCAAGCACTCCTGCC		LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	3/6					INFO_REALIGN_3_PRIME	chr17	TogoVar
LASP1_chr17_38865058_38926770	38896088	A A	AGGGGCAA others(11): Show AGGGGCAAGCACTTCTGCC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0088 a0001c0003t0004g0088	1	396	0.0025	18	c.250 others(35): Show c.250-2312_250-2311insTCTGCCGGGGCAAGCACT		LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	3/6					INFO_REALIGN_3_PRIME	chr17	TogoVar
LAT2_chr7_74205006_74234834	74214523	T T	TATAAATA others(11): Show TATAAATATATATATATGA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0016 a0001c0002t0001g0016	1	344	0.0029	18	c.-21 others(35): Show c.-218-298_-218-297insTAAATATATATATATGAA		LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	1/13					INFO_REALIGN_3_PRIME	chr7	TogoVar
LATS2_chr13_20968036_21066586	20969898	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0021 a0004c0004t0021	a0004c0004t0021g0254 a0004c0004t0021g0254	1	316	0.0032	18	c.49 others(29): Show c.4971_*4972insTTTTTTTTTTTTTTTTTT		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding					3137		chr13	TogoVar
LAX1_chr1_203760183_203781372	203767303	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG00673.hp2 others(27): Show HG00423.hp1 HG00621.hp1 HG00673.hp2 HG00738.hp1 HG01074.hp1 HG01243.hp2 HG01934.hp2 HG02027.hp2 HG02132.hp1 HG02273.hp1 HG02293.hp2 HG02738.hp2 HG03017.hp1 NA18612.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18973.hp1 NA18979.hp1 NA18979.hp2 NA18983.hp2 NA18993.hp1 NA18994.hp1 NA19000.hp1 NA19011.hp1 NA19077.hp1 NA19088.hp2 NA19090.hp2 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0022 a0001c0001t0031 a0001c0002t0002	a0001c0001t0001g0095 a0001c0001t0001g0102 a0001c0001t0001g0120 others(27): Show a0001c0001t0001g0095 a0001c0001t0001g0102 a0001c0001t0001g0120 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0272 a0001c0001t0003g0247 a0001c0001t0004g0249 a0001c0001t0004g0266 a0001c0001t0004g0269 a0001c0001t0004g0271 a0001c0001t0009g0248 a0001c0001t0022g0270 a0001c0001t0031g0396 a0001c0002t0002g0258 a0001c0002t0002g0262	30	422	0.0711	18	c.89+ others(33): Show c.89+1653_89+1670dupTTTTTTTTTTTTTTTTTT		LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4					INFO_REALIGN_3_PRIME	chr1	TogoVar
LAX1_chr1_203760183_203781372	203770429	A A	AAGAGAGA others(11): Show AAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0034 a0001c0005t0034	a0001c0005t0034g0342 a0001c0005t0034g0342	1	422	0.0024	18	c.90- others(31): Show c.90-396_90-395insGAGAGAGAGAGAGAGAGA		LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4					INFO_REALIGN_3_PRIME	chr1	TogoVar
LAX1_chr1_203760183_203781372	203770433	A A	AAGAGAGA others(11): Show AAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG03017.hp1 NA18954.hp1 others(4): Show HG01952.hp1 HG03017.hp1 NA18954.hp1 NA18981.hp2 NA19001.hp2 NA19009.hp1 NA19057.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0010c0020 a0001c0001 a0010c0020	a0001c0001t0001 a0010c0020t0001 a0001c0001t0001 a0010c0020t0001	a0001c0001t0001g0144 a0001c0001t0001g0159 a0001c0001t0001g0166 others(4): Show a0001c0001t0001g0144 a0001c0001t0001g0159 a0001c0001t0001g0166 a0001c0001t0001g0172 a0001c0001t0001g0225 a0001c0001t0001g0268 a0010c0020t0001g0214	7	422	0.0166	18	c.90- others(31): Show c.90-391_90-374dupGAGAGAGAGAGAGAGAGA		LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4					INFO_REALIGN_3_PRIME	chr1	TogoVar
LAX1_chr1_203760183_203781372	203770454	A A	AGAGAGAG others(11): Show AGAGAGAGAGAGAGAAAGG	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0333 a0001c0005t0003g0333	1	422	0.0024	18	c.90- others(31): Show c.90-374_90-373insGAGAGAGAGAGAGAAAGG		LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4						chr1	TogoVar
LBP_chr20_38341482_38382013	38378081	T T	TCCTCTCC others(11): Show TCCTCTCCCTCTCCCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG01175.hp1 HG01891.hp2 others(8): Show HG00642.hp2 HG01175.hp1 HG01891.hp2 HG02523.hp1 HG02572.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp2 HG04204.hp2 NA18906.hp1 NA20129.hp2	a0003 a0007 a0003 a0007	a0003c0004 a0003c0019 a0007c0011 a0003c0004 a0003c0019 a0007c0011	a0003c0004t0001 a0003c0019t0001 a0007c0011t0001 a0003c0004t0001 a0003c0019t0001 a0007c0011t0001	a0003c0004t0001g0028 a0003c0004t0001g0323 a0003c0004t0001g0326 others(7): Show a0003c0004t0001g0028 a0003c0004t0001g0323 a0003c0004t0001g0326 a0003c0004t0001g0329 a0003c0004t0001g0330 a0003c0004t0001g0332 a0003c0004t0001g0337 a0003c0004t0001g0338 a0003c0019t0001g0221 a0007c0011t0001g0331	11	394	0.0279	18	c.14 others(29): Show c.1412_*1413insCCTCTCCCTCTCCCTCTC		LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding					1069		chr20	TogoVar
LCA5L_chr21_39400728_39450778	39414738	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0250 a0002c0002t0002g0250	1	340	0.0029	18	c.976 others(35): Show c.976-2937_976-2936insCACACACACACACACACA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	7/10						chr21	TogoVar
LCA5L_chr21_39400728_39450778	39428578	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01175.hp1 HG02622.hp1 HG00735.hp1 HG01175.hp1 HG02622.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0160 a0002c0002t0002g0240 a0002c0002t0002g0268 a0001c0001t0001g0160 a0002c0002t0002g0240 a0002c0002t0002g0268	3	340	0.0088	18	c.-10 others(31): Show c.-10-93_-10-76dupTATATATATATATATATA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10						chr21	TogoVar
LCA5L_chr21_39400728_39450778	39428598	A A	ATATATAT others(11): Show ATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA19030.hp2 NA18522.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0164 a0001c0001t0001g0153 a0001c0001t0001g0164	2	340	0.0059	18	c.-10 others(31): Show c.-10-96_-10-95insAATATATATATATATATA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10						chr21	TogoVar
LCA5_chr6_79479991_79542430	79538018	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0005 a0003c0003t0004g0005	1	400	0.0025	18	c.-10 others(29): Show c.-1046_-1045insAAAAAAAAAAAAAAAAAA		LCA5	ENSG00000135338.14	transcript	ENST00000369846.9	protein_coding					589		chr6	TogoVar
LCE1F_chr1_152770140_152782024	152776532	C C	CCAGCTCT others(11): Show CCAGCTCTGGGGGCTGCTG	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG00544.hp2 HG00597.hp1 HG00621.hp1 others(35): Show HG00544.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp2 HG00735.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01175.hp1 HG01192.hp2 HG01261.hp1 HG01516.hp2 HG02027.hp2 HG02040.hp2 HG02056.hp2 HG02132.hp1 HG02735.hp1 HG02818.hp2 HG03239.hp1 HG03831.hp2 HG03927.hp2 HG04184.hp1 HG04228.hp2 NA18942.hp1 NA18955.hp1 NA18955.hp2 NA18966.hp1 NA18980.hp1 NA18994.hp2 NA18995.hp1 NA18997.hp1 NA19000.hp2 NA19006.hp1 NA19010.hp1 NA19054.hp2 NA19060.hp1 NA19090.hp1 NA20129.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	38	438	0.0868	18	c.174 others(25): Show c.174_191dupCTGCTGCAGCTCTGGGGG	p.Gly others(29): Show p.Gly64_Gly65insCysCysSerSerGlyGly	LCE1F	ENSG00000240386.4	transcript	ENST00000334371.4	protein_coding	2/2	265/726	192/357	64/118		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCE4A_chr1_152703160_152714434	152709204	C C	CAGCTCTG others(11): Show CAGCTCTGCGGGCTGCTGT	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	NA18945.hp1 NA18945.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0001 a0008c0009t0001g0001	1	416	0.0024	18	c.136 others(25): Show c.136_137insCGGGCTGCTGTAGCTCTG	p.Ser others(29): Show p.Ser45_Gly46insAlaGlyCysCysSerSer	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding	2/2	393/615	137/300	46/99		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCE4A_chr1_152703160_152714434	152709204	C C	CAGCTCTG others(11): Show CAGCTCTGGAGGCTGCTGT	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG02630.hp2 HG02895.hp2 HG02897.hp2 HG02630.hp2 HG02895.hp2 HG02897.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0002 a0001c0007t0001g0002	3	416	0.0072	18	c.137 others(25): Show c.137_138insAGGCTGCTGTAGCTCTGG	p.Gly others(29): Show p.Gly46_Gly47insGlyCysCysSerSerGly	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding	2/2	394/615	138/300	46/99		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCE4A_chr1_152703160_152714434	152709204	C C	CAGCTCTG others(11): Show CAGCTCTGGGGGCTGCTGT	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(288): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18960.hp1 NA18960.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18974.hp2 NA18976.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19060.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp2 NA19076.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0009	a0001c0001 a0003c0004 a0004c0005 others(2): Show a0001c0001 a0003c0004 a0004c0005 a0005c0006 a0009c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0003c0004t0001 a0003c0004t0006 a0004c0005t0001 a0005c0006t0002 a0009c0011t0008	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0001 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0003g0001 a0001c0001t0004g0001 a0001c0001t0005g0001 a0001c0001t0007g0001 a0003c0004t0001g0001 a0003c0004t0001g0002 a0003c0004t0001g0003 a0003c0004t0006g0001 a0004c0005t0001g0001 a0005c0006t0002g0001 a0009c0011t0008g0004	291	416	0.6995	18	c.143 others(25): Show c.143_144insCTGTAGCTCTGGGGGCTG	p.Cys others(29): Show p.Cys48_Gly49insCysSerSerGlyGlyCys	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding	2/2	400/615	144/300	48/99		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCE4A_chr1_152703160_152714434	152709213	G G	GGGCTGCT others(11): Show GGGCTGCTGTAGCTCTGGC	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG00423.hp1 HG00558.hp2 HG00609.hp1 others(27): Show HG00423.hp1 HG00558.hp2 HG00609.hp1 HG00673.hp2 HG01928.hp2 HG02083.hp1 HG02109.hp1 HG02135.hp2 HG02148.hp2 HG03491.hp2 HG03492.hp1 HG03669.hp1 HG03927.hp1 NA18612.hp2 NA18941.hp2 NA18951.hp2 NA18957.hp2 NA18963.hp2 NA18984.hp2 NA18986.hp1 NA18999.hp1 NA19054.hp1 NA19060.hp2 NA19063.hp1 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19075.hp2 NA19079.hp2 NA19087.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0001 a0003c0003t0002g0001	30	416	0.0721	18	c.143 others(25): Show c.143_144insCTGTAGCTCTGGCGGCTG	p.Cys others(29): Show p.Cys48_Gly49insCysSerSerGlyGlyCys	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding	2/2	400/615	144/300	48/99		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCE5A_chr1_152505803_152517177	152515514	G G	GGGGCTGC others(11): Show GGGGCTGCTGCGGCGACTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	434	0.0023	18	c.36 others(29): Show c.3623_*3624insGGGCTGCTGCGGCGACTC		LCE5A	ENSG00000186207.5	transcript	ENST00000334269.3	protein_coding					3338		chr1	TogoVar
LCE5A_chr1_152505803_152517177	152515515	G G	GGGCTGCT others(11): Show GGGCTGCTGCGGCGACTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG00673.hp1 HG02027.hp1 others(8): Show HG00558.hp2 HG00673.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp2 HG02129.hp1 HG02257.hp2 HG02723.hp1 HG02896.hp1 HG02897.hp2 HG03139.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0003 a0004c0004t0001 a0002c0002t0003 a0004c0004t0001	a0002c0002t0003g0002 a0004c0004t0001g0002 a0002c0002t0003g0002 a0004c0004t0001g0002	11	434	0.0254	18	c.36 others(29): Show c.3624_*3625insGGCTGCTGCGGCGACTCA		LCE5A	ENSG00000186207.5	transcript	ENST00000334269.3	protein_coding					3339		chr1	TogoVar
LCK_chr1_32246265_32291165	32258616	T T	TTCTACTA others(11): Show TTCTACTAAAAAACACGTC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp2 HG00544.hp2 others(60): Show HG00280.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG01109.hp2 HG01168.hp1 HG01255.hp1 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02071.hp2 HG02074.hp2 HG02129.hp2 HG02148.hp2 HG02257.hp1 HG02280.hp1 HG02486.hp2 HG02615.hp1 HG02630.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02922.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03453.hp1 HG03516.hp1 HG03669.hp1 HG03688.hp1 HG03927.hp1 HG04204.hp2 HG06807.hp2 NA18939.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp2 NA18961.hp1 NA18971.hp2 NA18979.hp1 NA18982.hp1 NA19010.hp2 NA19074.hp2 NA19084.hp2 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0003t0002 a0002c0002t0001 a0003c0004t0002	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(60): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0204 a0001c0001t0001g0207 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0269 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0048 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0005g0263 a0001c0003t0002g0022 a0001c0003t0002g0023 a0001c0003t0002g0029 a0001c0003t0002g0030 a0001c0003t0002g0031 a0002c0002t0001g0045 a0002c0002t0001g0050 a0002c0002t0001g0052 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0068 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0073 a0002c0002t0001g0206 a0003c0004t0002g0016 a0003c0004t0002g0017	63	274	0.2299	18	c.-6+ others(33): Show c.-6+7257_-6+7274dupACACGTCTCTACTAAAAA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32272573	A A	AAGAGAGA others(11): Show AAGAGAGAGAGAGAAAGAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(143): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp1 HG03017.hp2 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp2 HG04115.hp2 HG04204.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18939.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18961.hp1 NA18961.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp2 NA18979.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA19003.hp1 NA19003.hp2 NA19010.hp1 NA19010.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0001c0005 a0001c0008 others(4): Show a0001c0001 a0001c0005 a0001c0008 a0001c0010 a0002c0002 a0005c0009 a0006c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0005t0001 a0001c0008t0001 a0001c0010t0001 a0002c0002t0001 a0005c0009t0001 a0006c0007t0003	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(142): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0038 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0213 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0230 a0001c0001t0001g0233 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0001t0001g0243 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0251 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0269 a0001c0001t0003g0034 a0001c0001t0003g0106 a0001c0001t0003g0242 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0005t0001g0084 a0001c0008t0001g0085 a0001c0010t0001g0105 a0002c0002t0001g0045 a0002c0002t0001g0050 a0002c0002t0001g0052 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0068 a0002c0002t0001g0070 a0002c0002t0001g0206 a0005c0009t0001g0102 a0006c0007t0003g0006	146	274	0.5329	18	c.-5- others(33): Show c.-5-1702_-5-1685dupAAGAGAGAGAGAGAGAGA		LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
LCMT1_chr16_25106742_25183228	25179975	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG02071.hp1 HG02109.hp1 others(22): Show HG00741.hp1 HG02071.hp1 HG02109.hp1 HG02257.hp2 HG02572.hp1 HG02622.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp2 HG03130.hp2 HG03139.hp2 HG03453.hp2 HG03486.hp1 HG03579.hp1 HG03688.hp1 HG04204.hp2 NA18966.hp1 NA18991.hp2 NA19030.hp1 NA19070.hp1 NA19090.hp1 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0010 a0001c0001t0001g0043 a0001c0001t0001g0137 others(22): Show a0001c0001t0001g0010 a0001c0001t0001g0043 a0001c0001t0001g0137 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0212 a0001c0001t0001g0263 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0293 a0001c0001t0001g0305 a0001c0001t0001g0328 a0001c0001t0003g0090 a0001c0001t0003g0093 a0001c0001t0003g0103 a0001c0001t0003g0104	25	348	0.0718	18	c.19 others(29): Show c.1952_*1953insAAAAAAAAAAAAAAAAAA		LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding					1748		chr16	TogoVar
LCMT2_chr15_43318649_43335573	43334633	T T	TTATATAT others(11): Show TTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01169.hp1 HG01515.hp2 others(12): Show HG00280.hp1 HG01169.hp1 HG01515.hp2 HG01517.hp1 HG02083.hp2 HG02135.hp1 HG02280.hp2 HG02818.hp2 HG03209.hp1 HG03669.hp2 HG03831.hp1 NA18979.hp2 NA18997.hp1 NA19002.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013 a0001c0001t0021 a0001c0001t0030 a0001c0001t0058 a0001c0006t0003	a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 others(5): Show a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 a0001c0001t0013g0000 a0001c0001t0021g0000 a0001c0001t0030g0000 a0001c0001t0058g0000 a0001c0006t0003g0000	15	410	0.0366	18	c.-41 others(29): Show c.-4162_-4145dupTATATATATATATATATA		LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding					4061		chr15	TogoVar
LCN15_chr9_136754634_136769518	136769451	A A	ATGCACTG others(11): Show ATGCACTGCCCCCCGCCAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18957.hp1 NA19085.hp1 NA18957.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	356	0.0056	18	c.-49 others(29): Show c.-4964_-4963insGTGGCGGGGGGCAGTGCA		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4934		chr9	TogoVar
LCN15_chr9_136754634_136769518	136769485	A A	ATGCACTG others(11): Show ATGCACTGCCCCCCGCCAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	356	0.0028	18	c.-49 others(29): Show c.-4998_-4997insGTGGCGGGGGGCAGTGCA		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4968		chr9	TogoVar
LCN9_chr9_135658309_135671961	135671644	G G	GGGGGGGG others(11): Show GGGGGGGGGGGGGGGGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	424	0.0024	18	c.57 others(29): Show c.5793_*5794insGGGGGGGGGGGGGGGGGA		LCN9	ENSG00000148386.10	transcript	ENST00000619315.2	protein_coding					4684		chr9	TogoVar
LCORL_chr4_17836187_18026755	17939879	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02451.hp1 HG02976.hp2 others(3): Show HG01358.hp2 HG02451.hp1 HG02976.hp2 HG03209.hp2 HG03516.hp2 NA18906.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0007 a0002c0002 a0006c0007	a0002c0002t0020 a0006c0007t0006 a0002c0002t0020 a0006c0007t0006	a0002c0002t0020g0275 a0002c0002t0020g0276 a0006c0007t0006g0272 others(3): Show a0002c0002t0020g0275 a0002c0002t0020g0276 a0006c0007t0006g0272 a0006c0007t0006g0274 a0006c0007t0006g0277 a0006c0007t0006g0278	6	292	0.0206	18	c.430 others(37): Show c.430+22023_430+22024insGTGTGTGTGTGTGTGTGT		LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	4/7						chr4	TogoVar
LCORL_chr4_17836187_18026755	17939879	T T	TACGTACA others(11): Show TACGTACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0022 a0001c0003t0022	a0001c0003t0022g0243 a0001c0003t0022g0243	1	292	0.0034	18	c.430 others(37): Show c.430+22023_430+22024insGTGTGTGTGTGTGTACGT		LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	4/7						chr4	TogoVar
LCOR_chr10_96827298_97000956	96888363	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0011 a0001c0004t0011	a0001c0004t0011g0155 a0001c0004t0011g0155	1	288	0.0035	18	c.-32 others(39): Show c.-329-18891_-329-18874dupAAAAAAAAAAAAAAAAAA		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	2/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96916587	C C	CCATATAT others(11): Show CCATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0106 a0001c0001t0106	a0001c0001t0106g0286 a0001c0001t0106g0286	1	288	0.0035	18	c.-18 others(37): Show c.-184+8840_-184+8841insCATATATATATATATATA		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7						chr10	TogoVar
LCOR_chr10_96827298_97000956	96916587	C C	CTATATAT others(11): Show CTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0038 a0003c0003t0004g0038	1	288	0.0035	18	c.-18 others(37): Show c.-184+8842_-184+8859dupATATATATATATATATAT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96920434	G G	GTATATAT others(11): Show GTATATATATATATATTCA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02257.hp1 HG02486.hp1 others(10): Show HG01109.hp1 HG02257.hp1 HG02486.hp1 HG02717.hp1 HG02895.hp2 HG03195.hp2 HG03453.hp1 HG03471.hp2 HG03579.hp2 HG06807.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2	a0004 a0007 a0004 a0007	a0004c0005 a0004c0009 a0007c0016 a0004c0005 a0004c0009 a0007c0016	a0004c0005t0021 a0004c0005t0042 a0004c0005t0043 others(10): Show a0004c0005t0021 a0004c0005t0042 a0004c0005t0043 a0004c0005t0045 a0004c0005t0046 a0004c0005t0047 a0004c0005t0048 a0004c0005t0049 a0004c0005t0050 a0004c0009t0021 a0004c0009t0044 a0004c0009t0064 a0007c0016t0146	a0004c0005t0021g0171 a0004c0005t0042g0170 a0004c0005t0043g0124 others(10): Show a0004c0005t0021g0171 a0004c0005t0042g0170 a0004c0005t0043g0124 a0004c0005t0045g0168 a0004c0005t0046g0125 a0004c0005t0047g0172 a0004c0005t0048g0167 a0004c0005t0049g0169 a0004c0005t0050g0173 a0004c0009t0021g0187 a0004c0009t0044g0186 a0004c0009t0064g0166 a0007c0016t0146g0007	13	288	0.0451	18	c.-18 others(39): Show c.-184+12694_-184+12695insATATATATTCATATATAT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96920442	G G	GTATATAT others(11): Show GTATATATATTCATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00733.hp1 HG00741.hp1 others(27): Show HG00639.hp1 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01361.hp2 HG01515.hp2 HG02055.hp1 HG02258.hp2 HG02280.hp1 HG02486.hp2 HG02559.hp1 HG02615.hp2 HG02630.hp1 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG03195.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp2 HG03688.hp2 HG04115.hp2 HG04228.hp2 NA19030.hp2	a0001 a0015 a0001 a0015	a0001c0001 a0015c0021 a0001c0001 a0015c0021	a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 others(19): Show a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0022 a0001c0001t0023 a0001c0001t0026 a0001c0001t0051 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0068 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0015c0021t0017	a0001c0001t0016g0004 a0001c0001t0016g0136 a0001c0001t0016g0176 others(27): Show a0001c0001t0016g0004 a0001c0001t0016g0136 a0001c0001t0016g0176 a0001c0001t0017g0145 a0001c0001t0017g0146 a0001c0001t0018g0150 a0001c0001t0018g0151 a0001c0001t0018g0152 a0001c0001t0022g0143 a0001c0001t0022g0144 a0001c0001t0023g0130 a0001c0001t0023g0159 a0001c0001t0026g0223 a0001c0001t0026g0242 a0001c0001t0051g0133 a0001c0001t0065g0148 a0001c0001t0066g0137 a0001c0001t0067g0138 a0001c0001t0068g0134 a0001c0001t0070g0139 a0001c0001t0071g0132 a0001c0001t0072g0135 a0001c0001t0073g0141 a0001c0001t0074g0131 a0001c0001t0075g0140 a0001c0001t0076g0149 a0001c0001t0077g0127 a0001c0001t0078g0128 a0001c0001t0079g0142 a0015c0021t0017g0147	30	288	0.1042	18	c.-18 others(39): Show c.-184+12696_-184+12697insATATATATTCATATATAT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96920749	T T	TGTATATA others(11): Show TGTATATATGTATACACAC	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02083.hp1 HG02071.hp1 HG02083.hp1	a0009 a0009	a0009c0012 a0009c0012	a0009c0012t0007 a0009c0012t0008 a0009c0012t0007 a0009c0012t0008	a0009c0012t0007g0063 a0009c0012t0008g0020 a0009c0012t0007g0063 a0009c0012t0008g0020	2	288	0.0069	18	c.-18 others(39): Show c.-184+13002_-184+13003insGTATATATGTATACACAC		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7						chr10	TogoVar
LCOR_chr10_96827298_97000956	96942458	G G	GGAGGGAG others(11): Show GGAGGGAGAGGGAGAGGGA	intron_variant intron_variant	MODIFIER	HG01884.hp1 NA20300.hp2 HG01884.hp1 NA20300.hp2	a0007 a0007	a0007c0013 a0007c0013	a0007c0013t0080 a0007c0013t0141 a0007c0013t0080 a0007c0013t0141	a0007c0013t0080g0174 a0007c0013t0141g0175 a0007c0013t0080g0174 a0007c0013t0141g0175	2	288	0.0069	18	c.-18 others(37): Show c.-183-1653_-183-1636dupAGGGAGAGGGAGAGGGAG		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7					INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989674	G G	GATATATA others(11): Show GATATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0043 a0004c0005t0043	a0004c0005t0043g0124 a0004c0005t0043g0124	1	288	0.0035	18	c.45 others(29): Show c.4545_*4562dupATATATATATATATATAT		LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8				4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCP1_chr13_46120923_46187177	46128884	T T	TACTATGG others(11): Show TACTATGGTTACACCAGAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(272): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18946.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp2 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19072.hp1 NA19072.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19085.hp1 NA19085.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0008 a0001c0009 others(3): Show a0001c0001 a0001c0008 a0001c0009 a0001c0010 a0004c0007 a0006c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0008t0002 a0001c0009t0002 a0001c0010t0002 a0004c0007t0002 a0006c0011t0021	a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(269): Show a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0178 a0001c0001t0001g0183 a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0225 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0244 a0001c0001t0001g0254 a0001c0001t0001g0257 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0269 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0285 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0297 a0001c0001t0001g0312 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0322 a0001c0001t0001g0334 a0001c0001t0001g0343 a0001c0001t0001g0344 a0001c0001t0001g0348 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0001g0351 a0001c0001t0001g0359 a0001c0001t0001g0364 a0001c0001t0001g0367 a0001c0001t0001g0368 a0001c0001t0001g0369 a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0093 a0001c0001t0002g0096 a0001c0001t0002g0102 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0119 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0135 a0001c0001t0002g0138 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0156 a0001c0001t0002g0165 a0001c0001t0002g0170 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0192 a0001c0001t0002g0197 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0219 a0001c0001t0002g0221 a0001c0001t0002g0223 a0001c0001t0002g0237 a0001c0001t0002g0243 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0265 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0273 a0001c0001t0002g0281 a0001c0001t0002g0284 a0001c0001t0002g0286 a0001c0001t0002g0290 a0001c0001t0002g0293 a0001c0001t0002g0296 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0300 a0001c0001t0002g0304 a0001c0001t0002g0313 a0001c0001t0002g0315 a0001c0001t0002g0319 a0001c0001t0002g0323 a0001c0001t0002g0325 a0001c0001t0002g0326 a0001c0001t0002g0327 a0001c0001t0002g0330 a0001c0001t0002g0332 a0001c0001t0002g0333 a0001c0001t0002g0336 a0001c0001t0002g0337 a0001c0001t0002g0345 a0001c0001t0002g0353 a0001c0001t0002g0356 a0001c0001t0002g0357 a0001c0001t0002g0361 a0001c0001t0002g0363 a0001c0001t0002g0371 a0001c0001t0003g0022 a0001c0001t0003g0040 a0001c0001t0003g0087 a0001c0001t0003g0099 a0001c0001t0003g0270 a0001c0001t0003g0320 a0001c0001t0004g0355 a0001c0001t0008g0050 a0001c0001t0008g0233 a0001c0001t0008g0261 a0001c0001t0008g0372 a0001c0001t0011g0235 a0001c0001t0012g0159 a0001c0001t0012g0362 a0001c0001t0014g0275 a0001c0001t0014g0365 a0001c0001t0015g0324 a0001c0001t0015g0346 a0001c0001t0017g0292 a0001c0001t0018g0152 a0001c0001t0019g0055 a0001c0001t0020g0112 a0001c0001t0023g0194 a0001c0001t0024g0026 a0001c0001t0025g0173 a0001c0008t0002g0067 a0001c0009t0002g0085 a0001c0010t0002g0226 a0004c0007t0002g0140 a0006c0011t0021g0069	275	382	0.7199	18	c.175 others(37): Show c.1752-1179_1752-1162dupGTCTGGTGTAACCATAGT		LCP1	ENSG00000136167.15	transcript	ENST00000323076.7	protein_coding	15/15						chr13	TogoVar
LCP1_chr13_46120923_46187177	46178027	C C	CATGTTTA others(11): Show CATGTTTATTTTTCCAGGA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01243.hp2 HG02055.hp1 others(18): Show HG01074.hp2 HG01243.hp2 HG02055.hp1 HG02145.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02717.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02976.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03453.hp2 HG03471.hp2 HG03516.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0026 a0002c0002t0003 a0002c0002t0016	a0001c0001t0001g0178 a0001c0001t0001g0183 a0001c0001t0001g0188 others(17): Show a0001c0001t0001g0178 a0001c0001t0001g0183 a0001c0001t0001g0188 a0001c0001t0002g0004 a0001c0001t0002g0177 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0192 a0001c0001t0004g0239 a0001c0001t0026g0184 a0002c0002t0003g0179 a0002c0002t0003g0182 a0002c0002t0003g0187 a0002c0002t0003g0189 a0002c0002t0003g0190 a0002c0002t0003g0241 a0002c0002t0003g0242 a0002c0002t0016g0191	21	382	0.0550	18	c.-25 others(35): Show c.-25+4083_-25+4084insTCCTGGAAAAATAAACAT		LCP1	ENSG00000136167.15	transcript	ENST00000323076.7	protein_coding	1/15						chr13	TogoVar
LCP2_chr5_170241233_170302777	170281070	C C	CAGCATTT others(11): Show CAGCATTTATGGGGAGAGG	intron_variant intron_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0002 a0001c0007t0002	a0001c0007t0002g0161 a0001c0007t0002g0161	1	384	0.0026	18	c.189 others(35): Show c.189-5211_189-5210insCCTCTCCCCATAAATGCT		LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	3/20						chr5	TogoVar
LCTL_chr15_66542532_66570998	66544724	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01884.hp2 HG02109.hp2 others(11): Show HG00544.hp1 HG01884.hp2 HG02109.hp2 HG02572.hp2 HG02630.hp1 HG02896.hp1 HG02897.hp2 HG03491.hp1 HG03492.hp1 NA18522.hp1 NA18968.hp1 NA19011.hp1 NA19065.hp1 NA20805.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0009 a0001c0001 a0002c0002 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0002c0002t0001 a0005c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0016 a0001c0001t0001g0170 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0016 a0001c0001t0001g0170 a0001c0001t0001g0220 a0001c0001t0002g0141 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0005g0057 a0002c0002t0001g0199 a0005c0009t0001g0059	14	434	0.0323	18	c.37 others(29): Show c.3748_*3765dupCACACACACACACACACA		LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding					2807		chr15	TogoVar
LCT_chr2_135782850_135842184	135795604	C C	CTAATAAT others(11): Show CTAATAATTATAATAATAA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01346.hp1 HG01358.hp1 others(2): Show HG01261.hp1 HG01346.hp1 HG01358.hp1 HG02293.hp2 HG02300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0005 a0002c0002t0001 a0002c0002t0005	a0002c0002t0001g0120 a0002c0002t0001g0157 a0002c0002t0001g0187 others(2): Show a0002c0002t0001g0120 a0002c0002t0001g0157 a0002c0002t0001g0187 a0002c0002t0005g0109 a0002c0002t0005g0114	5	366	0.0137	18	c.497 others(35): Show c.4977-830_4977-829insTTATTATTATAATTATTA		LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	13/16						chr2	TogoVar
LCT_chr2_135782850_135842184	135835976	G G	GTATATAA others(11): Show GTATATAAATATATATATA	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0048 a0003c0003t0002g0048	1	366	0.0027	18	c.640 others(33): Show c.640+553_640+554insTATATATATATTTATATA		LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	1/16						chr2	TogoVar
LDAF1_chr16_21153674_21185616	21156996	A A	AACACACA others(11): Show AACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0088 a0001c0001t0002g0088	1	390	0.0026	18	c.-18 others(29): Show c.-1849_-1848insACACACACACACACACAC		LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding					1677		chr16	TogoVar
LDAH_chr2_20679031_20828101	20710604	G G	GTATGTGT others(11): Show GTATGTGTGTGTGTGTATA	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	258	0.0039	18	c.704 others(35): Show c.704-8953_704-8952insTATACACACACACACATA		LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding	5/6						chr2	TogoVar

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