regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LOC122539214_chr19_52645447_52695496 | 52683228 | C | CTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0343 | 1 | 452 | 0.0022 | 18 | c.-20 others(35): Show |
LOC122539214 | ENSG00000269825.3 | transcript | ENST00000598322.3 | protein_coding | 1/3 | chr19 | TogoVar | ||||||
LOC127903862_chr6_16323342_16333431 | 16327684 | A | ATGCTGCT others(11): Show |
downstream_gene_variant | MODIFIER | HG02055.hp2 HG03139.hp2 NA18966.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 5 | 430 | 0.0116 | 18 | c.*64 others(27): Show |
LOC127903862 | ENSG00000288708.1 | transcript | ENST00000683730.1 | protein_coding | 657 | chr6 | TogoVar | ||||||
LOC128092252_chr15_50643802_50691717 | 50681264 | T | TACACACA others(11): Show |
intron_variant | MODIFIER | HG01192.hp2 HG02559.hp2 HG02572.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0019a0001c0001t0000g0020a0001c0001t0000g0021others(4): Show | 7 | 388 | 0.0180 | 18 | c.187 others(35): Show |
LOC128092252 | ENSG00000288645.1 | transcript | ENST00000676296.1 | protein_coding | 1/3 | chr15 | TogoVar | ||||||
LOC128125814_chr12_57512712_57525480 | 57522767 | G | GGCGGCGG others(11): Show |
upstream_gene_variant | MODIFIER | HG00544.hp1 | a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0001 | 1 | 326 | 0.0031 | 18 | c.-22 others(29): Show |
LOC128125814 | ENSG00000285133.1 | transcript | ENST00000642841.1 | protein_coding | 2288 | chr12 | TogoVar | ||||||
LOC128462377_chr16_89312046_89423292 | 89384879 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01175.hp2 HG03225.hp2 NA18942.hp1 |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0229a0001c0001t0000g0326a0001c0001t0000g0343 | 3 | 366 | 0.0082 | 18 | c.9+3 others(33): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | ||||||
LOC128462377_chr16_89312046_89423292 | 89415829 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00609.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0011a0001c0001t0000g0066a0001c0001t0000g0067others(18): Show | 21 | 366 | 0.0574 | 18 | c.9+2 others(31): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | ||||||
LOC128706665_chr20_10408708_10439222 | 10427029 | G | GACACACA others(11): Show |
intron_variant | MODIFIER | HG02630.hp1 HG02717.hp1 |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0001 | a0001c0001t0001g0210a0004c0004t0001g0247 | 2 | 408 | 0.0049 | 18 | c.-21 others(35): Show |
LOC128706665 | ENSG00000285723.2 | transcript | ENST00000649912.2 | protein_coding | 1/2 | chr20 | TogoVar | ||||||
LOC128706666_chr20_10408708_10439222 | 10427029 | G | GACACACA others(11): Show |
intron_variant | MODIFIER | HG02630.hp1 HG02717.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0210a0001c0001t0006g0247 | 2 | 408 | 0.0049 | 18 | c.-27 others(37): Show |
LOC128706666 | ENSG00000285508.2 | transcript | ENST00000713549.1 | protein_coding | 1/2 | chr20 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11369978 | G | GTATATAT others(11): Show |
downstream_gene_variant | MODIFIER | HG02622.hp1 | a0092 | a0092c0113 | a0092c0113t0005 | a0092c0113t0005g0014 | 1 | 310 | 0.0032 | 18 | c.*27 others(29): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 2036 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11443489 | A | AAGAGAGA others(11): Show |
intron_variant | MODIFIER | NA21309.hp1 | a0101 | a0101c0067 | a0101c0067t0001 | a0101c0067t0001g0304 | 1 | 310 | 0.0032 | 18 | c.483 others(37): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 33/66 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11463434 | A | ATGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01891.hp2 HG02886.hp1 |
a0040a0041 | a0040c0038a0041c0039 | a0040c0038t0002a0041c0039t0013 | a0040c0038t0002g0030a0041c0039t0013g0309 | 2 | 310 | 0.0065 | 18 | c.322 others(37): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 23/66 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11464170 | T | TGTATGGA others(11): Show |
intron_variant | MODIFIER | HG02572.hp1 | a0157 | a0157c0194 | a0157c0194t0002 | a0157c0194t0002g0031 | 1 | 310 | 0.0032 | 18 | c.322 others(37): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 23/66 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11494122 | G | GGGGCAGT others(11): Show |
intron_variant | MODIFIER | HG02280.hp2 HG02717.hp2 HG03225.hp2 |
a0062a0063a0189 | a0062c0123a0063c0124a0189c0234 | a0062c0123t0004a0063c0124t0004a0189c0234t0004 | a0062c0123t0004g0166a0063c0124t0004g0013a0189c0234t0004g0195 | 3 | 310 | 0.0097 | 18 | c.143 others(35): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 11/66 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11500511 | A | AAATAATA others(11): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(19): Show |
a0019a0033a0034others(18): Show | a0019c0093a0033c0250a0034c0028others(18): Show | a0019c0093t0001a0033c0250t0004a0034c0028t0002others(18): Show | a0019c0093t0001g0156a0033c0250t0004g0102a0034c0028t0002g0043others(19): Show | 22 | 310 | 0.0710 | 18 | c.124 others(35): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 10/66 | chr16 | TogoVar | ||||||
LOC729966_chr19_18245034_18260362 | 18251681 | C | CCCCCCGC others(11): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00741.hp1 HG01109.hp2 others(15): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0002c0005others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0005t0001others(1): Show | a0001c0001t0001g0019a0001c0001t0001g0031a0001c0001t0001g0056others(6): Show | 18 | 454 | 0.0397 | 18 | c.496 others(33): Show |
LOC729966 | ENSG00000284797.2 | transcript | ENST00000643046.2 | protein_coding | 2/3 | chr19 | TogoVar | ||||||
LONP1_chr19_5686834_5725146 | 5697516 | A | AGAAGAGG others(11): Show |
intron_variant | MODIFIER | HG02622.hp2 HG02970.hp2 HG03041.hp2 others(1): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0264a0001c0005t0001g0227a0001c0005t0001g0228others(1): Show | 4 | 386 | 0.0104 | 18 | c.168 others(35): Show |
LONP1 | ENSG00000196365.12 | transcript | ENST00000360614.8 | protein_coding | 10/17 | chr19 | TogoVar | ||||||
LONP1_chr19_5686834_5725146 | 5715643 | T | TAAAAAAA others(11): Show |
intron_variant | MODIFIER | NA18939.hp1 NA19012.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0137a0001c0001t0001g0138 | 2 | 386 | 0.0052 | 18 | c.430 others(35): Show |
LONP1 | ENSG00000196365.12 | transcript | ENST00000360614.8 | protein_coding | 1/17 | chr19 | TogoVar | ||||||
LONP1_chr19_5686834_5725146 | 5716259 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG02155.hp2 HG02630.hp1 HG03704.hp1 others(6): Show |
a0001a0021 | a0001c0001a0001c0019a0021c0035 | a0001c0001t0001a0001c0001t0002a0001c0019t0001others(1): Show | a0001c0001t0001g0148a0001c0001t0001g0149a0001c0001t0001g0217others(6): Show | 9 | 386 | 0.0233 | 18 | c.430 others(35): Show |
LONP1 | ENSG00000196365.12 | transcript | ENST00000360614.8 | protein_coding | 1/17 | chr19 | TogoVar | ||||||
LONRF1_chr8_12716906_12760526 | 12758768 | C | CCTCTCTC others(11): Show |
upstream_gene_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0128 | 1 | 404 | 0.0025 | 18 | c.-33 others(29): Show |
LONRF1 | ENSG00000154359.13 | transcript | ENST00000398246.8 | protein_coding | 3243 | chr8 | TogoVar | ||||||
LONRF1_chr8_12716906_12760526 | 12758805 | C | CTCTCTCT others(11): Show |
upstream_gene_variant | MODIFIER | HG01074.hp2 NA19240.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0026a0001c0001t0001g0045 | 2 | 404 | 0.0050 | 18 | c.-33 others(29): Show |
LONRF1 | ENSG00000154359.13 | transcript | ENST00000398246.8 | protein_coding | 3280 | chr8 | TogoVar | ||||||
LORICRIN_chr1_153254687_153267124 | 153255727 | T | TCACACAC others(11): Show |
upstream_gene_variant | MODIFIER | NA19062.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0001 | 1 | 422 | 0.0024 | 18 | c.-40 others(29): Show |
LORICRIN | ENSG00000203782.6 | transcript | ENST00000368742.4 | protein_coding | 3959 | chr1 | TogoVar | ||||||
LORICRIN_chr1_153254687_153267124 | 153256514 | T | TTATATAT others(11): Show |
upstream_gene_variant | MODIFIER | HG02027.hp1 HG02071.hp2 HG03195.hp1 others(2): Show |
a0002a0014 | a0002c0002a0014c0011 | a0002c0002t0001a0002c0002t0005a0014c0011t0001 | a0002c0002t0001g0001a0002c0002t0005g0001a0014c0011t0001g0005 | 5 | 422 | 0.0119 | 18 | c.-32 others(29): Show |
LORICRIN | ENSG00000203782.6 | transcript | ENST00000368742.4 | protein_coding | 3172 | chr1 | TogoVar | ||||||
LORICRIN_chr1_153254687_153267124 | 153256532 | A | ATATATAT others(11): Show |
upstream_gene_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0001 | 1 | 422 | 0.0024 | 18 | c.-32 others(29): Show |
LORICRIN | ENSG00000203782.6 | transcript | ENST00000368742.4 | protein_coding | 3154 | chr1 | TogoVar | ||||||
LORICRIN_chr1_153254687_153267124 | 153261139 | T | TGCGGCGG others(11): Show |
conservative_inframe_insertion | MODERATE | NA21309.hp2 | a0015 | a0015c0016 | a0015c0016t0001 | a0015c0016t0001g0001 | 1 | 422 | 0.0024 | 18 | c.202 others(25): Show |
p.Ser others(11): Show |
LORICRIN | ENSG00000203782.6 | transcript | ENST00000368742.4 | protein_coding | 2/2 | 290/1245 | 220/939 | 74/312 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
LOXHD1_chr18_46472273_46662220 | 46574388 | T | TACACACA others(11): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00609.hp1 HG00733.hp2 others(29): Show |
a0001a0002a0003others(13): Show | a0001c0001a0002c0002a0002c0055others(14): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(17): Show | a0001c0001t0001g0055a0001c0001t0001g0063a0001c0001t0001g0070others(29): Show | 32 | 270 | 0.1185 | 18 | c.197 others(37): Show |
LOXHD1 | ENSG00000167210.17 | transcript | ENST00000642948.1 | protein_coding | 14/40 | chr18 | TogoVar | ||||||
LOXHD1_chr18_46472273_46662220 | 46574419 | A | ACACACAC others(11): Show |
intron_variant | MODIFIER | HG02886.hp2 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0046 | 1 | 270 | 0.0037 | 18 | c.197 others(37): Show |
LOXHD1 | ENSG00000167210.17 | transcript | ENST00000642948.1 | protein_coding | 14/40 | chr18 | TogoVar | ||||||
LOXL1_chr15_73921462_73957136 | 73935934 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00544.hp2 NA19012.hp1 NA19085.hp2 |
a0002 | a0002c0001 | a0002c0001t0001a0002c0001t0004 | a0002c0001t0001g0205a0002c0001t0004g0097a0002c0001t0004g0233 | 3 | 448 | 0.0067 | 18 | c.110 others(37): Show |
LOXL1 | ENSG00000129038.16 | transcript | ENST00000261921.8 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LOXL2_chr8_23291897_23409120 | 23328709 | A | ATGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01261.hp1 HG03195.hp2 |
a0001 | a0001c0013a0001c0018 | a0001c0013t0001a0001c0018t0001 | a0001c0013t0001g0075a0001c0018t0001g0342 | 2 | 348 | 0.0058 | 18 | c.967 others(33): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 5/13 | chr8 | TogoVar | ||||||
LOXL2_chr8_23291897_23409120 | 23346143 | A | AAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02622.hp1 | a0001 | a0001c0013 | a0001c0013t0001 | a0001c0013t0001g0084 | 1 | 348 | 0.0029 | 18 | c.532 others(35): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 3/13 | chr8 | TogoVar | ||||||
LOXL2_chr8_23291897_23409120 | 23354588 | C | CTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG00597.hp1 HG00639.hp2 HG00673.hp1 others(19): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0008a0001c0028others(6): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(12): Show | a0001c0002t0001g0181a0001c0002t0001g0193a0001c0002t0002g0151others(19): Show | 22 | 348 | 0.0632 | 18 | c.531 others(35): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 3/13 | chr8 | TogoVar | ||||||
LOXL2_chr8_23291897_23409120 | 23354932 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG02896.hp2 | a0002 | a0002c0036 | a0002c0036t0003 | a0002c0036t0003g0136 | 1 | 348 | 0.0029 | 18 | c.531 others(35): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 3/13 | chr8 | TogoVar | ||||||
LOXL4_chr10_98242690_98273194 | 98268404 | C | CGGGGGGC others(11): Show |
upstream_gene_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG01069.hp2 others(34): Show |
a0001a0002a0003others(3): Show | a0001c0002a0002c0001a0003c0005others(3): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(7): Show | a0001c0002t0001g0014a0001c0002t0002g0003a0001c0002t0002g0008others(18): Show | 37 | 438 | 0.0845 | 18 | c.-30 others(27): Show |
LOXL4 | ENSG00000138131.4 | transcript | ENST00000260702.4 | protein_coding | 211 | chr10 | TogoVar | ||||||
LPAR1_chr9_110868263_111043470 | 110959170 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0003 | a0001c0003t0010 | a0001c0003t0010g0253 | 1 | 302 | 0.0033 | 18 | c.45+ others(35): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 4/5 | chr9 | TogoVar | ||||||
LPAR1_chr9_110868263_111043470 | 111009998 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG03710.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0086 | 1 | 302 | 0.0033 | 18 | c.-18 others(39): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 2/5 | chr9 | TogoVar | ||||||
LPAR3_chr1_84806602_84898206 | 84817261 | T | TCACACAC others(11): Show |
intron_variant | MODIFIER | HG00323.hp1 HG02055.hp2 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0002a0001c0006t0052 | a0001c0001t0002g0362a0001c0006t0052g0287 | 2 | 382 | 0.0052 | 18 | c.737 others(35): Show |
LPAR3 | ENSG00000171517.6 | transcript | ENST00000370611.4 | protein_coding | 2/2 | chr1 | TogoVar | ||||||
LPAR5_chr12_6613835_6640959 | 6617994 | G | GACACACA others(11): Show |
downstream_gene_variant | MODIFIER | NA18954.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0035 | 1 | 406 | 0.0025 | 18 | c.*21 others(29): Show |
LPAR5 | ENSG00000184574.10 | transcript | ENST00000329858.9 | protein_coding | 840 | chr12 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160553937 | C | CTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01346.hp1 HG02027.hp1 HG02132.hp1 others(6): Show |
a0002a0004a0007others(1): Show | a0002c0002a0002c0028a0004c0004others(2): Show | a0002c0002t0001a0002c0002t0003a0002c0028t0003others(4): Show | a0002c0002t0001g0100a0002c0002t0003g0134a0002c0002t0003g0135others(6): Show | 9 | 148 | 0.0608 | 18 | c.497 others(37): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 30/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160553954 | T | TGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG03239.hp1 | a0003 | a0003c0008 | a0003c0008t0001 | a0003c0008t0001g0061 | 1 | 148 | 0.0068 | 18 | c.497 others(37): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 30/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160553954 | T | TGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00140.hp2 HG02165.hp2 HG03486.hp1 others(2): Show |
a0003 | a0003c0003a0003c0008a0003c0032 | a0003c0003t0001a0003c0008t0001a0003c0032t0001 | a0003c0003t0001g0055a0003c0003t0001g0083a0003c0003t0001g0090others(2): Show | 5 | 148 | 0.0338 | 18 | c.497 others(37): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 30/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160553954 | T | TGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00280.hp2 HG01346.hp2 HG02257.hp1 others(5): Show |
a0002a0003a0004others(2): Show | a0002c0002a0003c0003a0004c0004others(2): Show | a0002c0002t0003a0003c0003t0001a0004c0004t0001others(2): Show | a0002c0002t0003g0143a0002c0002t0003g0144a0002c0002t0003g0145others(5): Show | 8 | 148 | 0.0541 | 18 | c.497 others(37): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 30/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160555436 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG02165.hp2 HG02486.hp1 HG03041.hp2 others(3): Show |
a0003a0030 | a0003c0003a0030c0042 | a0003c0003t0001a0030c0042t0001 | a0003c0003t0001g0058a0003c0003t0001g0075a0003c0003t0001g0083others(3): Show | 6 | 148 | 0.0405 | 18 | c.497 others(35): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 30/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160584237 | T | TTCTTCTT others(11): Show |
intron_variant | MODIFIER | NA18990.hp1 NA20905.hp2 |
a0005 | a0005c0007 | a0005c0007t0003 | a0005c0007t0003g0129a0005c0007t0003g0136 | 2 | 148 | 0.0135 | 18 | c.428 others(35): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 26/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160654027 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG03471.hp2 | a0014 | a0014c0031 | a0014c0031t0004 | a0014c0031t0004g0044 | 1 | 148 | 0.0068 | 18 | c.50- others(33): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 1/38 | chr6 | TogoVar | ||||||
LPCAT3_chr12_6971185_7023476 | 6983334 | T | TTCCCTAC others(11): Show |
intron_variant | MODIFIER | NA19076.hp2 | a0007 | a0007c0011 | a0007c0011t0001 | a0007c0011t0001g0110 | 1 | 282 | 0.0036 | 18 | c.259 others(31): Show |
LPCAT3 | ENSG00000111684.11 | transcript | ENST00000261407.9 | protein_coding | 2/12 | chr12 | TogoVar | ||||||
LPCAT4_chr15_34353633_34372196 | 34369608 | A | ATTTTTTT others(11): Show |
upstream_gene_variant | MODIFIER | HG02451.hp1 HG03130.hp2 NA19043.hp1 |
a0001a0005 | a0001c0001a0005c0005 | a0001c0001t0001a0005c0005t0001 | a0001c0001t0001g0018a0001c0001t0001g0020a0005c0005t0001g0107 | 3 | 450 | 0.0067 | 18 | c.-25 others(29): Show |
LPCAT4 | ENSG00000176454.15 | transcript | ENST00000314891.11 | protein_coding | 2413 | chr15 | TogoVar | ||||||
LPCAT4_chr15_34353633_34372196 | 34371786 | G | GGGGAGAG others(11): Show |
upstream_gene_variant | MODIFIER | HG02074.hp1 HG03453.hp2 NA18940.hp2 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0003t0001 | a0001c0001t0002g0013a0001c0001t0002g0014a0001c0001t0002g0083others(4): Show | 7 | 450 | 0.0156 | 18 | c.-46 others(29): Show |
LPCAT4 | ENSG00000176454.15 | transcript | ENST00000314891.11 | protein_coding | 4591 | chr15 | TogoVar | ||||||
LPGAT1_chr1_211738457_211835763 | 211800035 | T | TTTATTAT others(11): Show |
intron_variant | MODIFIER | HG01433.hp2 HG02698.hp2 HG02723.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0033a0001c0001t0034 | a0001c0001t0006g0017a0001c0001t0006g0018a0001c0001t0006g0226others(10): Show | 15 | 332 | 0.0452 | 18 | c.239 others(35): Show |
LPGAT1 | ENSG00000123684.13 | transcript | ENST00000366997.9 | protein_coding | 2/7 | chr1 | TogoVar | ||||||
LPIN1_chr2_11741632_11832409 | 11752433 | A | ATTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01496.hp2 HG03098.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0068a0001c0001t0003g0069 | 2 | 278 | 0.0072 | 18 | c.-10 others(35): Show |
LPIN1 | ENSG00000134324.12 | transcript | ENST00000674199.1 | protein_coding | 1/20 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LPIN2_chr18_2911999_3018144 | 2956311 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG01106.hp2 | a0001 | a0001c0001 | a0001c0001t0033 | a0001c0001t0033g0165 | 1 | 380 | 0.0026 | 18 | c.193 others(35): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 2/19 | chr18 | TogoVar | ||||||
LPIN2_chr18_2911999_3018144 | 2958141 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG03942.hp1 NA19065.hp1 |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0100 | a0001c0001t0013g0334a0001c0001t0100g0220 | 2 | 380 | 0.0053 | 18 | c.192 others(35): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 2/19 | chr18 | TogoVar |