regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LRRC63_chr13_46206928_46282115 | 46255645 | A | AAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01243.hp2 HG02572.hp2 HG03139.hp1 others(2): Show |
a0003a0010 | a0003c0004a0010c0015 | a0003c0004t0023a0003c0004t0024a0010c0015t0020 | a0003c0004t0023g0006a0003c0004t0023g0149a0003c0004t0024g0006others(1): Show | 5 | 386 | 0.0130 | 18 | c.122 others(37): Show |
LRRC63 | ENSG00000173988.14 | transcript | ENST00000595396.3 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
LRRC63_chr13_46206928_46282115 | 46276854 | A | ATATATAT others(11): Show |
3_prime_UTR_variant | MODIFIER | HG00609.hp2 HG01168.hp1 HG02027.hp2 others(6): Show |
a0001a0008 | a0001c0001a0008c0008 | a0001c0001t0013a0001c0001t0049a0001c0001t0055others(1): Show | a0001c0001t0013g0001a0001c0001t0013g0020a0001c0001t0013g0063others(6): Show | 9 | 386 | 0.0233 | 18 | c.*64 others(25): Show |
LRRC63 | ENSG00000173988.14 | transcript | ENST00000595396.3 | protein_coding | 10/10 | 65 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||
LRRC69_chr8_91097619_91224257 | 91176134 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | NA18977.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0127 | 1 | 318 | 0.0031 | 18 | c.652 others(37): Show |
LRRC69 | ENSG00000214954.9 | transcript | ENST00000448384.3 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
LRRC69_chr8_91097619_91224257 | 91176134 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG01123.hp1 NA18966.hp2 NA18969.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0293a0001c0001t0001g0300a0001c0001t0001g0301 | 3 | 318 | 0.0094 | 18 | c.652 others(37): Show |
LRRC69 | ENSG00000214954.9 | transcript | ENST00000448384.3 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
LRRC69_chr8_91097619_91224257 | 91176134 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG00735.hp2 HG02922.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007a0001c0001t0001g0009 | 2 | 318 | 0.0063 | 18 | c.652 others(37): Show |
LRRC69 | ENSG00000214954.9 | transcript | ENST00000448384.3 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156928363 | C | CTCCTCTT others(11): Show |
intron_variant | MODIFIER | HG01257.hp2 HG01258.hp1 HG04184.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0063 | 4 | 402 | 0.0100 | 18 | c.996 others(33): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156928363 | C | CTCTTCTT others(11): Show |
intron_variant | MODIFIER | HG02040.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0257 | 1 | 402 | 0.0025 | 18 | c.996 others(33): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156928363 | C | CTCTTCTT others(11): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00642.hp2 HG01070.hp1 others(11): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0002c0002t0001a0003c0004t0001 | a0001c0001t0001g0017a0001c0001t0001g0043a0001c0001t0001g0052others(8): Show | 14 | 402 | 0.0348 | 18 | c.996 others(33): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156930032 | T | TTTTCTTT others(11): Show |
intron_variant | MODIFIER | HG01981.hp1 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0301 | 1 | 402 | 0.0025 | 18 | c.124 others(35): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156930044 | C | CTCTTTCT others(11): Show |
intron_variant | MODIFIER | HG00323.hp2 HG00639.hp1 HG01070.hp1 others(60): Show |
a0001a0003a0015 | a0001c0001a0003c0004a0015c0016 | a0001c0001t0001a0003c0004t0001a0015c0016t0001 | a0001c0001t0001g0008a0001c0001t0001g0019a0001c0001t0001g0021others(47): Show | 63 | 402 | 0.1567 | 18 | c.124 others(35): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156930046 | C | CTTTCTTT others(11): Show |
intron_variant | MODIFIER | HG01433.hp2 HG01891.hp1 HG02109.hp1 others(9): Show |
a0003 | a0003c0004a0003c0015 | a0003c0004t0001a0003c0015t0001 | a0003c0004t0001g0072a0003c0004t0001g0073a0003c0004t0001g0074others(9): Show | 12 | 402 | 0.0299 | 18 | c.124 others(35): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC71_chr1_156915632_156938094 | 156936493 | A | AATATATA others(11): Show |
downstream_gene_variant | MODIFIER | HG02080.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0254 | 1 | 402 | 0.0025 | 18 | c.*35 others(29): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 3400 | chr1 | TogoVar | ||||||
LRRC71_chr1_156915632_156938094 | 156936495 | A | AATATATA others(11): Show |
downstream_gene_variant | MODIFIER | HG01928.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0159 | 1 | 402 | 0.0025 | 18 | c.*35 others(29): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 3402 | chr1 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0004 | 1 | 366 | 0.0027 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0033 | 1 | 366 | 0.0027 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG02486.hp2 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 2 | 366 | 0.0055 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG03209.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 366 | 0.0027 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 366 | 0.0027 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC73_chr6_43501968_43515346 | 43502076 | A | ACACACTC others(11): Show |
downstream_gene_variant | MODIFIER | HG01934.hp1 HG02809.hp1 HG02895.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 5 | 366 | 0.0137 | 18 | c.*51 others(29): Show |
LRRC73 | ENSG00000204052.5 | transcript | ENST00000372441.2 | protein_coding | 4891 | chr6 | TogoVar | ||||||
LRRC74A_chr14_76821408_76875304 | 76853430 | G | GGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG02965.hp2 HG02970.hp1 HG03195.hp2 others(1): Show |
a0001a0009 | a0001c0001a0009c0023 | a0001c0001t0001a0001c0001t0002a0009c0023t0003 | a0001c0001t0001g0327a0001c0001t0002g0326a0001c0001t0002g0328others(1): Show | 4 | 408 | 0.0098 | 18 | c.957 others(31): Show |
LRRC74A | ENSG00000100565.16 | transcript | ENST00000689127.1 | protein_coding | 9/13 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LRRC75A_chr17_16436577_16497193 | 16456045 | G | GGGAGGGA others(11): Show |
intron_variant | MODIFIER | NA18995.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0189 | 1 | 342 | 0.0029 | 18 | c.375 others(35): Show |
LRRC75A | ENSG00000181350.12 | transcript | ENST00000470794.2 | protein_coding | 2/3 | chr17 | TogoVar | ||||||
LRRC75A_chr17_16436577_16497193 | 16485681 | T | TGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00099.hp1 HG01192.hp1 HG02257.hp2 |
a0001 | a0001c0004 | a0001c0004t0005 | a0001c0004t0005g0045a0001c0004t0005g0046a0001c0004t0005g0047 | 3 | 342 | 0.0088 | 18 | c.246 others(35): Show |
LRRC75A | ENSG00000181350.12 | transcript | ENST00000470794.2 | protein_coding | 1/3 | chr17 | TogoVar | ||||||
LRRC7_chr1_69562922_70149364 | 69588985 | C | CTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0001 | a0001c0003 | a0001c0003t0031 | a0001c0003t0031g0034 | 1 | 108 | 0.0093 | 18 | c.2+2 others(33): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC7_chr1_69562922_70149364 | 69637072 | T | TTCTCTCT others(11): Show |
intron_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0009 | a0001c0009t0091 | a0001c0009t0091g0090 | 1 | 108 | 0.0093 | 18 | c.3-4 others(33): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC7_chr1_69562922_70149364 | 69650539 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00621.hp2 HG01074.hp2 HG01884.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0006a0002c0015 | a0001c0001t0003a0001c0001t0009a0001c0001t0027others(6): Show | a0001c0001t0003g0041a0001c0001t0009g0072a0001c0001t0027g0040others(6): Show | 9 | 108 | 0.0833 | 18 | c.3-2 others(33): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC7_chr1_69562922_70149364 | 69718142 | G | GAAAGAAA others(11): Show |
intron_variant | MODIFIER | HG02055.hp2 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0035 | 1 | 108 | 0.0093 | 18 | c.100 others(37): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC7_chr1_69562922_70149364 | 69781735 | G | GAAAGAAA others(11): Show |
intron_variant | MODIFIER | NA18966.hp1 NA18992.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0030 | a0001c0001t0001g0079a0001c0001t0030g0077 | 2 | 108 | 0.0185 | 18 | c.304 others(37): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC7_chr1_69562922_70149364 | 69865469 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0001 | a0001c0001t0076 | a0001c0001t0076g0053 | 1 | 108 | 0.0093 | 18 | c.647 others(37): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 7/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC8A_chr9_128877133_128923039 | 128890130 | T | TTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG01081.hp1 HG02273.hp1 NA18950.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0002 | a0001c0001t0002g0032a0001c0001t0002g0169a0001c0001t0002g0232others(3): Show | 6 | 344 | 0.0174 | 18 | c.-9+ others(33): Show |
LRRC8A | ENSG00000136802.12 | transcript | ENST00000372600.9 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
LRRC8B_chr1_89519829_89602861 | 89562150 | A | AACACACA others(11): Show |
intron_variant | MODIFIER | HG00140.hp2 HG01261.hp2 HG02451.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0007a0001c0001t0027 | a0001c0001t0004g0227a0001c0001t0004g0237a0001c0001t0007g0088others(1): Show | 4 | 324 | 0.0124 | 18 | c.-24 others(37): Show |
LRRC8B | ENSG00000197147.15 | transcript | ENST00000330947.7 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LRRC8E_chr19_7883510_7907016 | 7884535 | A | AGGAGGAG others(11): Show |
upstream_gene_variant | MODIFIER | NA19056.hp2 | a0002 | a0002c0010 | a0002c0010t0003 | a0002c0010t0003g0026 | 1 | 390 | 0.0026 | 18 | c.-40 others(29): Show |
LRRC8E | ENSG00000171017.11 | transcript | ENST00000306708.11 | protein_coding | 3974 | chr19 | TogoVar | ||||||
LRRC9_chr14_59915144_60071817 | 60067740 | A | AATATATA others(11): Show |
downstream_gene_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00423.hp1 others(29): Show |
a0001a0004a0008others(1): Show | a0001c0001a0004c0008a0008c0011others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(10): Show | a0001c0001t0001g0080a0001c0001t0001g0093a0001c0001t0001g0222others(29): Show | 32 | 322 | 0.0994 | 18 | c.*43 others(29): Show |
LRRC9 | ENSG00000131951.12 | transcript | ENST00000570145.2 | protein_coding | 924 | chr14 | TogoVar | ||||||
LRRC9_chr14_59915144_60071817 | 60067760 | T | TATATATA others(11): Show |
downstream_gene_variant | MODIFIER | NA18977.hp1 NA18995.hp1 |
a0002 | a0002c0003 | a0002c0003t0005 | a0002c0003t0005g0187a0002c0003t0005g0188 | 2 | 322 | 0.0062 | 18 | c.*43 others(29): Show |
LRRC9 | ENSG00000131951.12 | transcript | ENST00000570145.2 | protein_coding | 944 | chr14 | TogoVar | ||||||
LRRD1_chr7_92139842_92184142 | 92152140 | A | AGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG02071.hp2 HG02559.hp2 HG02572.hp2 others(9): Show |
a0002a0014 | a0002c0002a0002c0012a0014c0019 | a0002c0002t0001a0002c0012t0001a0014c0019t0001 | a0002c0002t0001g0237a0002c0002t0001g0256a0002c0002t0001g0264others(9): Show | 12 | 360 | 0.0333 | 18 | c.211 others(37): Show |
LRRD1 | ENSG00000240720.10 | transcript | ENST00000458448.6 | protein_coding | 3/5 | chr7 | TogoVar | ||||||
LRRD1_chr7_92139842_92184142 | 92167876 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00738.hp1 HG02258.hp1 HG02717.hp1 others(2): Show |
a0002a0011 | a0002c0002a0011c0018 | a0002c0002t0001a0011c0018t0001 | a0002c0002t0001g0251a0002c0002t0001g0252a0002c0002t0001g0253others(2): Show | 5 | 360 | 0.0139 | 18 | c.-74 others(35): Show |
LRRD1 | ENSG00000240720.10 | transcript | ENST00000458448.6 | protein_coding | 1/5 | chr7 | TogoVar | ||||||
LRRFIP1_chr2_237622587_237786643 | 237681678 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG00438.hp1 HG01516.hp1 HG02074.hp1 others(12): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(5): Show | a0001c0001t0001g0080a0001c0001t0001g0114a0001c0001t0003g0247others(12): Show | 15 | 276 | 0.0544 | 18 | c.97- others(35): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LRRIQ1_chr12_85031351_85250105 | 85086935 | C | CATTATTA others(11): Show |
intron_variant | MODIFIER | HG03139.hp2 HG03209.hp1 |
a0001a0010 | a0001c0001a0010c0019 | a0001c0001t0001a0010c0019t0001 | a0001c0001t0001g0086a0010c0019t0001g0096 | 2 | 228 | 0.0088 | 18 | c.288 others(39): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LRRIQ1_chr12_85031351_85250105 | 85102949 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG00621.hp1 NA18957.hp2 NA19057.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0126a0001c0001t0002g0146a0001c0001t0002g0147 | 3 | 228 | 0.0132 | 18 | c.321 others(37): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 13/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LRRIQ1_chr12_85031351_85250105 | 85102953 | A | AATATATA others(11): Show |
intron_variant | MODIFIER | HG02895.hp1 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0216a0001c0001t0001g0217 | 2 | 228 | 0.0088 | 18 | c.321 others(37): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 13/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LRRIQ1_chr12_85031351_85250105 | 85174701 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01261.hp2 HG01496.hp1 HG02040.hp1 others(8): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0003a0004c0008others(1): Show | a0001c0001t0001a0002c0003t0001a0004c0008t0001others(1): Show | a0001c0001t0001g0009a0002c0003t0001g0166a0002c0003t0001g0178others(8): Show | 11 | 228 | 0.0483 | 18 | c.482 others(39): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 24/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LRRIQ1_chr12_85031351_85250105 | 85236830 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG00639.hp2 HG00735.hp1 HG01070.hp1 others(15): Show |
a0001a0003a0004 | a0001c0001a0001c0009a0003c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0009t0004others(3): Show | a0001c0001t0001g0009a0001c0001t0001g0010a0001c0001t0001g0011others(15): Show | 18 | 228 | 0.0790 | 18 | c.501 others(37): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 26/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LRRIQ3_chr1_74021015_74203176 | 74022362 | C | CAAAAAAA others(11): Show |
downstream_gene_variant | MODIFIER | NA18985.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0207 | 1 | 274 | 0.0037 | 18 | c.*44 others(29): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 3652 | chr1 | TogoVar | ||||||
LRRIQ3_chr1_74021015_74203176 | 74087381 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG03098.hp1 HG03225.hp1 |
a0005 | a0005c0006 | a0005c0006t0005 | a0005c0006t0005g0267a0005c0006t0005g0269 | 2 | 274 | 0.0073 | 18 | c.868 others(37): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 5/7 | chr1 | TogoVar | ||||||
LRRIQ4_chr3_169807870_169842773 | 169808578 | A | AATAAATC others(11): Show |
upstream_gene_variant | MODIFIER | HG03209.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0027 | 1 | 386 | 0.0026 | 18 | c.-45 others(29): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 4291 | chr3 | TogoVar | ||||||
LRRIQ4_chr3_169807870_169842773 | 169830377 | G | GAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01978.hp2 NA18984.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0206a0001c0001t0001g0290 | 2 | 386 | 0.0052 | 18 | c.119 others(34): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRRIQ4_chr3_169807870_169842773 | 169835364 | C | CTTTGTGT others(11): Show |
intron_variant | MODIFIER | NA18959.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0342 | 1 | 386 | 0.0026 | 18 | c.153 others(37): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 100941304 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG00323.hp1 HG00544.hp1 HG00609.hp1 others(172): Show |
a0001a0002a0003others(15): Show | a0001c0002a0001c0003a0001c0004others(86): Show | a0001c0002t0001a0001c0002t0027a0001c0002t0032others(162): Show | a0001c0002t0001g0199a0001c0002t0027g0002a0001c0002t0032g0029others(172): Show | 175 | 338 | 0.5178 | 18 | c.97+ others(35): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 100956455 | C | CTTTTTCT others(11): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00609.hp1 others(71): Show |
a0001a0002a0003others(5): Show | a0001c0002a0001c0003a0001c0004others(35): Show | a0001c0002t0001a0001c0002t0032a0001c0002t0166others(67): Show | a0001c0002t0001g0199a0001c0002t0032g0029a0001c0002t0166g0216others(71): Show | 74 | 338 | 0.2189 | 18 | c.98- others(35): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 100956455 | C | CTTTTTCT others(11): Show |
intron_variant | MODIFIER | HG01884.hp1 HG01884.hp2 HG02109.hp2 others(3): Show |
a0001a0024a0030 | a0001c0050a0001c0054a0001c0077others(3): Show | a0001c0050t0231a0001c0054t0058a0001c0077t0024others(3): Show | a0001c0050t0231g0123a0001c0054t0058g0013a0001c0077t0024g0322others(3): Show | 6 | 338 | 0.0178 | 18 | c.98- others(35): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LRRK1_chr15_100914357_101083257 | 100956458 | T | TTTCTTTT others(11): Show |
intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01346.hp2 others(2): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0001 | a0001c0002t0040a0001c0002t0054a0001c0002t0152others(2): Show | a0001c0002t0040g0197a0001c0002t0054g0179a0001c0002t0152g0203others(2): Show | 5 | 338 | 0.0148 | 18 | c.98- others(35): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar |