Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MACROD2_chr20_13990516_16058197	15793124	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGCATGCGC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG01081.hp2 others(2): Show HG00738.hp1 HG00738.hp2 HG01081.hp2 HG01168.hp1 NA18970.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0009 a0001c0001t0013 a0002c0002t0002 others(2): Show a0001c0001t0009 a0001c0001t0013 a0002c0002t0002 a0002c0002t0008 a0003c0003t0006	a0001c0001t0009g0005 a0001c0001t0013g0006 a0002c0002t0002g0022 others(2): Show a0001c0001t0009g0005 a0001c0001t0013g0006 a0002c0002t0002g0022 a0002c0002t0008g0023 a0003c0003t0006g0019	5	24	0.2083	18	c.646 others(37): Show c.646-69620_646-69603dupGTGTGTGTGTGCATGCGC	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15869238	T T	TATAGAGA others(11): Show TATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0022 a0002c0002t0002g0022	1	24	0.0417	18	c.727 others(35): Show c.727+6413_727+6414insTAGAGAGAGAGAGAGAGA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15869238	T T	TATATAGA others(11): Show TATATAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	24	0.0417	18	c.727 others(35): Show c.727+6413_727+6414insTATAGAGAGAGAGAGAGA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15876109	A A	ATATATAT others(11): Show ATATATATATATATATATG	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0016 a0001c0001t0004g0016	1	24	0.0417	18	c.728 others(35): Show c.728-9652_728-9651insATATATATATATATGTAT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15995649	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0009 a0001c0001t0011g0009	1	24	0.0417	18	c.115 others(37): Show c.1153+8494_1153+8511dupTTTTTTTTTTTTTTTTTT	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	15/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROH2A1_chr5_135329381_135404231	135387526	T T	TCTCTGAG others(11): Show TCTCTGAGCTCAGTCCTTG	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0108	1	220	0.0046	18	c.172 others(35): Show c.172+1395_172+1396insCAAGGACTGAGCTCAGAG	MACROH2A1	ENSG00000113648.17	transcript	ENST00000511689.6	protein_coding	2/8			chr5	TogoVar
MACROH2A2_chr10_70047846_70117282	70079565	G G	GCACACAC others(11): Show GCACACACACACACACACA	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0009 a0001c0009t0009	a0001c0009t0009g0070 a0001c0009t0009g0070	1	372	0.0027	18	c.172 others(35): Show c.172+3759_172+3776dupACACACACACACACACAC	MACROH2A2	ENSG00000099284.15	transcript	ENST00000373255.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr10	TogoVar
MAD1L1_chr7_1810795_2237945	1919998	T T	TCCAGTGA others(11): Show TCCAGTGACACGGAGGTCC	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	264	0.0038	18	c.180 others(39): Show c.1807+16671_1807+16688dupGGACCTCCGTGTCACTGG	MAD1L1	ENSG00000002822.16	transcript	ENST00000265854.12	protein_coding	17/18			chr7	TogoVar
MAD2L1_chr4_120050623_120071848	120055476	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0065 a0001c0001t0020g0065	1	382	0.0026	18	c.46 others(29): Show c.4641_*4642insAAAAAAAAAAAAAAAAAA	MAD2L1	ENSG00000164109.14	transcript	ENST00000296509.11	protein_coding		146		chr4	TogoVar
MADCAM1_chr19_491486_510343	497354	C C	CGGGAGAG others(11): Show CGGGAGAGGGGAGGGGGCT	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0002 a0002	a0002c0014 a0002c0014	a0002c0014t0001 a0002c0014t0001	a0002c0014t0001g0172 a0002c0014t0001g0172	1	364	0.0028	18	c.53- others(31): Show c.53-479_53-478insGGGAGAGGGGAGGGGGCT	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding	1/4			chr19	TogoVar
MAEA_chr4_1284891_1345137	1297454	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02970.hp2 NA19043.hp1 NA20752.hp2 HG02970.hp2 NA19043.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0013g0161 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0013g0161	3	388	0.0077	18	c.69+ others(33): Show c.69+7475_69+7476insTGTGTGTGTGTGTGTGTG	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEA_chr4_1284891_1345137	1297461	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18960.hp1 NA18972.hp1 others(4): Show NA18941.hp1 NA18960.hp1 NA18972.hp1 NA19012.hp2 NA19067.hp1 NA19086.hp1 NA19091.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0012 a0001c0002t0001g0066 a0001c0002t0001g0067 others(4): Show a0001c0002t0001g0012 a0001c0002t0001g0066 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0071	7	388	0.0180	18	c.69+ others(33): Show c.69+7490_69+7491insGTGTGTGTGTGTGTGTGT	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEA_chr4_1284891_1345137	1330310	T T	TTCTCTCT others(11): Show TTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03225.hp2 NA18747.hp1 NA18945.hp2 HG03225.hp2 NA18747.hp1 NA18945.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0007 a0001c0001t0001 a0001c0003t0007	a0001c0001t0001g0193 a0001c0001t0001g0234 a0001c0003t0007g0279 a0001c0001t0001g0193 a0001c0001t0001g0234 a0001c0003t0007g0279	3	388	0.0077	18	c.657 others(35): Show c.657-2432_657-2431insCTCTCTCTCTCTCTCTCT	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEL_chr1_166984280_167027214	167006601	C C	CTATATAT others(11): Show CTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	408	0.0025	18	c.845 others(35): Show c.845+1223_845+1240dupTATATATATATATATATA	MAEL	ENSG00000143194.13	transcript	ENST00000367872.9	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
MAF1_chr8_144099461_144112611	144109641	C C	CGCCTGCG others(11): Show CGCCTGCGCACCAGTCGCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0010 a0002c0002t0002g0010	1	336	0.0030	18	c.25 others(29): Show c.2532_*2533insGCCTGCGCACCAGTCGCT	MAF1	ENSG00000179632.10	transcript	ENST00000322428.10	protein_coding		2031		chr8	TogoVar
MAFA_chr8_143423064_143435732	143427933	G G	GCCGTCAC others(11): Show GCCGTCACCCAGGGCCCGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00438.hp1 HG00673.hp1 others(68): Show HG00280.hp2 HG00438.hp1 HG00673.hp1 HG01099.hp1 HG01168.hp2 HG01192.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01433.hp1 HG01433.hp2 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02572.hp1 HG02647.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03654.hp1 HG03669.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18942.hp2 NA18951.hp2 NA18952.hp2 NA18956.hp2 NA18962.hp2 NA18969.hp2 NA18973.hp2 NA18980.hp2 NA18982.hp2 NA18988.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19009.hp2 NA19043.hp1 NA19065.hp1 NA19081.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0015 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0015 a0001c0001t0027 a0001c0001t0028 a0004c0004t0002	a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0015g0000 others(3): Show a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0015g0000 a0001c0001t0027g0000 a0001c0001t0028g0000 a0004c0004t0002g0000	71	446	0.1592	18	c.13 others(29): Show c.1394_*1411dupACGGGCCCTGGGTGACGG	MAFA	ENSG00000182759.4	transcript	ENST00000333480.3	protein_coding		130		chr8	TogoVar
MAFF_chr22_38196994_38221507	38210623	A A	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	388	0.0026	18	c.-31 others(35): Show c.-31-3179_-31-3162dupGTGTGTGTGTGTGTGTGT	MAFF	ENSG00000185022.12	transcript	ENST00000338483.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr22	TogoVar
MAFG_chr17_81913270_81932735	81925996	C C	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	356	0.0028	18	c.-30 others(35): Show c.-30+1514_-30+1531dupCACACACACACACACACA	MAFG	ENSG00000197063.11	transcript	ENST00000357736.9	protein_coding	1/2			chr17	TogoVar
MAGEA12_chrX_152728757_152742669	152729992	T T	TTATATAT others(11): Show TTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0006 a0002c0004t0006	a0002c0004t0006g0010 a0002c0004t0006g0010	1	322	0.0031	18	c.-40 others(29): Show c.-4049_-4048insTATATATATATATATATA	MAGEA12	ENSG00000213401.10	transcript	ENST00000393869.8	protein_coding		3764		chrX	TogoVar
MAGEA2_chrX_152744863_152758842	152757605	T T	TTATATAT others(11): Show TTATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp1 HG02970.hp1 HG01515.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0002 a0001c0001t0001g0010	2	191	0.0105	18	c.-41 others(29): Show c.-4149_-4148insTATATATATATATATATA	MAGEA2	ENSG00000268606.6	transcript	ENST00000684311.1	protein_coding		3764		chrX	TogoVar
MAGEA2_chrX_152744863_152758842	152757605	T T	TTTTATAT others(11): Show TTTTATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	191	0.0052	18	c.-41 others(29): Show c.-4149_-4148insTATATATATATATATAAA	MAGEA2	ENSG00000268606.6	transcript	ENST00000684311.1	protein_coding		3764		chrX	TogoVar
MAGEB10_chrX_27802990_27828014	27809503	G G	GCCCCCCC others(11): Show GCCCCCCCCCCCCGCCCGC	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	250	0.0040	18	c.-19 others(37): Show c.-199+1478_-199+1479insCGCCCGCCCCCCCCCCCC	MAGEB10	ENSG00000177689.10	transcript	ENST00000356790.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAGEB10_chrX_27802990_27828014	27809519	G G	GCCCCCCC others(11): Show GCCCCCCCCCCCCGCCCGC	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0123 a0001c0001t0001g0123	1	250	0.0040	18	c.-19 others(37): Show c.-199+1493_-199+1494insCCGCCCGCCCCCCCCCCC	MAGEB10	ENSG00000177689.10	transcript	ENST00000356790.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
MAGED4B_chrX_52056827_52074183	52060535	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	216	0.0046	18	c.14 others(29): Show c.1493_*1494insCACACACACACACACACA	MAGED4B	ENSG00000187243.17	transcript	ENST00000335504.10	protein_coding		1291		chrX	TogoVar
MAGED4_chrX_52179888_52197268	52193536	A A	AACACACA others(11): Show AACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG02717.hp1 HG01934.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0001 a0001c0001t0001g0002	2	220	0.0091	18	c.14 others(29): Show c.1470_*1471insACACACACACACACACAC	MAGED4	ENSG00000154545.17	transcript	ENST00000471932.6	protein_coding		1269		chrX	TogoVar
MAGI1_chr3_65348526_66043918	65395636	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02622.hp1 HG03579.hp1 HG00735.hp2 HG02622.hp1 HG03579.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0009 a0001c0001 a0003c0009	a0001c0001t0001 a0003c0009t0001 a0001c0001t0001 a0003c0009t0001	a0001c0001t0001g0064 a0001c0001t0001g0098 a0003c0009t0001g0025 a0001c0001t0001g0064 a0001c0001t0001g0098 a0003c0009t0001g0025	3	104	0.0289	18	c.220 others(37): Show c.2200-4296_2200-4279dupTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	13/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65419229	C C	CACACACA others(11): Show CACACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0102 a0001c0001t0011g0102	1	104	0.0096	18	c.216 others(39): Show c.2167+10290_2167+10291insATGTGTGTGTGTGTGTGT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	12/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65419231	C C	CACACACA others(11): Show CACACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01258.hp1 HG01258.hp2 others(3): Show HG00738.hp2 HG01258.hp1 HG01258.hp2 HG02735.hp2 HG03041.hp1 HG03195.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0008 a0001c0001 a0002c0002 a0006c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0002c0002t0001 a0006c0008t0001	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0003g0046 others(3): Show a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0003g0046 a0001c0001t0009g0007 a0002c0002t0001g0061 a0006c0008t0001g0092	6	104	0.0577	18	c.216 others(39): Show c.2167+10288_2167+10289insATGTGTGTGTGTGTGTGT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	12/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65530665	A A	ATACATAT others(11): Show ATACATATATATATACGTG	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0008 a0008	a0008c0010 a0008c0010	a0008c0010t0001 a0008c0010t0001	a0008c0010t0001g0067 a0008c0010t0001g0067	1	104	0.0096	18	c.431 others(37): Show c.431-37035_431-37034insCACGTATATATATATGTA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	2/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65621917	T T	TCACACAC others(11): Show TCACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0012 a0004c0004t0012	a0004c0004t0012g0103 a0004c0004t0012g0103	1	104	0.0096	18	c.430 others(31): Show c.430+37_430+54dupTGTGTGTGTGTGTGTGTG	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	2/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65680795	T T	TATGATAT others(11): Show TATGATATGATATGATATG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp1 HG02145.hp1 others(13): Show HG01891.hp2 HG02055.hp1 HG02145.hp1 HG02486.hp2 HG02572.hp2 HG02622.hp1 HG02896.hp1 HG02965.hp1 HG02970.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03453.hp1 HG03579.hp2 NA19030.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0005 a0002c0002 others(3): Show a0001c0001 a0001c0005 a0002c0002 a0003c0003 a0003c0009 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0005t0001 a0002c0002t0002 a0002c0002t0007 a0003c0003t0001 a0003c0003t0002 a0003c0009t0001 a0004c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0038 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0038 a0001c0001t0002g0019 a0001c0001t0006g0005 a0001c0001t0008g0010 a0001c0001t0011g0102 a0001c0005t0001g0043 a0002c0002t0002g0084 a0002c0002t0007g0066 a0003c0003t0001g0099 a0003c0003t0002g0008 a0003c0009t0001g0025 a0004c0004t0001g0057 a0004c0004t0001g0073 a0004c0004t0001g0094	16	104	0.1539	18	c.314 others(37): Show c.314-58708_314-58707insCATATCATATCATATCAT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65795696	T T	TACACACA others(11): Show TACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01261.hp2 HG02698.hp1 others(2): Show HG01167.hp1 HG01261.hp2 HG02698.hp1 HG03942.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0001c0001t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0001g0016 a0001c0001t0001g0093 a0001c0001t0001g0096 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0002g0024 a0002c0002t0001g0049	5	104	0.0481	18	c.314 others(39): Show c.314-173626_314-173609dupGTGTGTGTGTGTGTGTGT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65812468	T T	TCACTCTC others(11): Show TCACTCTCACACACACACA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	104	0.0096	18	c.314 others(39): Show c.314-190381_314-190380insTGTGTGTGTGTGAGAGTG	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65819875	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG03239.hp2 HG03492.hp2 HG01361.hp1 HG03239.hp2 HG03492.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0033 a0002c0002t0001g0018 a0002c0002t0001g0060 a0001c0001t0001g0033 a0002c0002t0001g0018 a0002c0002t0001g0060	3	104	0.0289	18	c.314 others(39): Show c.314-197805_314-197788dupTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65846976	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0029 a0001c0001t0003g0029	1	104	0.0096	18	c.313 others(39): Show c.313+191002_313+191019dupTTTTTTTTTTTTTTTTTT	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65880908	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0019	1	104	0.0096	18	c.313 others(39): Show c.313+157070_313+157087dupACACACACACACACACAC	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI1_chr3_65348526_66043918	65910855	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02976.hp1 HG00738.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0002g0014 a0001c0001t0001g0003 a0001c0001t0002g0014	2	104	0.0192	18	c.313 others(39): Show c.313+127123_313+127140dupAAAAAAAAAAAAAAAAAA	MAGI1	ENSG00000151276.24	transcript	ENST00000402939.7	protein_coding	1/22			chr3	TogoVar
MAGI2_chr7_78012055_79458667	78227850	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0001 a0001c0003t0003g0001	1	40	0.0250	18	c.204 others(39): Show c.2048-26675_2048-26658dupCACACACACACACACACA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	10/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78328502	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA19030.hp2 HG01261.hp1 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0006 a0001c0003t0002 a0001c0003t0006	a0001c0003t0002g0012 a0001c0003t0006g0032 a0001c0003t0002g0012 a0001c0003t0006g0032	2	40	0.0500	18	c.140 others(39): Show c.1408+15258_1408+15275dupGTGTGTGTGTGTGTGTGT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	9/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78367100	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02897.hp2 HG02965.hp2 HG01261.hp1 HG02897.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0011 a0001c0001 a0001c0003 a0001c0011	a0001c0001t0001 a0001c0003t0006 a0001c0011t0001 a0001c0001t0001 a0001c0003t0006 a0001c0011t0001	a0001c0001t0001g0017 a0001c0003t0006g0032 a0001c0011t0001g0023 a0001c0001t0001g0017 a0001c0003t0006g0032 a0001c0011t0001g0023	3	40	0.0750	18	c.110 others(37): Show c.1103+2038_1103+2055dupGTGTGTGTGTGTGTGTGT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	7/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78529668	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA18522.hp1 NA20129.hp1 HG02451.hp2 NA18522.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0013 a0001c0001t0002g0029 a0001c0002t0001g0008 a0001c0001t0002g0013 a0001c0001t0002g0029 a0001c0002t0001g0008	3	40	0.0750	18	c.539 others(35): Show c.539-8041_539-8024dupAAAAAAAAAAAAAAAAAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78573365	A A	AAAATATA others(11): Show AAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0031 a0001c0004t0001g0031	1	40	0.0250	18	c.539 others(37): Show c.539-51721_539-51720insATATATATATATATATTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	78573365	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0025 a0001c0002t0001g0025	1	40	0.0250	18	c.539 others(37): Show c.539-51738_539-51721dupATATATATATATATATAT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	3/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79171770	A A	ATATATAT others(11): Show ATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	40	0.0250	18	c.302 others(39): Show c.302-164565_302-164564insAAAAAAAATATATATATA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79171770	A A	ATATATAT others(11): Show ATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0032 a0001c0003t0006g0032	1	40	0.0250	18	c.302 others(39): Show c.302-164565_302-164564insAAAAAAAAAATATATATA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79191402	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03486.hp1 HG03486.hp2 HG02965.hp1 HG03486.hp1 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0007 a0001c0002 a0001c0005 a0001c0007	a0001c0002t0001 a0001c0005t0001 a0001c0007t0001 a0001c0002t0001 a0001c0005t0001 a0001c0007t0001	a0001c0002t0001g0028 a0001c0005t0001g0005 a0001c0007t0001g0040 a0001c0002t0001g0028 a0001c0005t0001g0005 a0001c0007t0001g0040	3	40	0.0750	18	c.302 others(39): Show c.302-184214_302-184197dupAAAAAAAAAAAAAAAAAA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79214407	C C	CTCTCTCT others(11): Show CTCTCTCTATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0035	1	40	0.0250	18	c.302 others(39): Show c.302-207202_302-207201insTATATATATATAGAGAGA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79228354	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00738.hp2 HG02451.hp2 others(2): Show HG00639.hp1 HG00738.hp2 HG02451.hp2 HG03225.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0001c0014 a0001c0015	a0001c0001t0002 a0001c0003t0002 a0001c0005t0001 others(2): Show a0001c0001t0002 a0001c0003t0002 a0001c0005t0001 a0001c0014t0001 a0001c0015t0001	a0001c0001t0002g0013 a0001c0003t0002g0004 a0001c0005t0001g0005 others(2): Show a0001c0001t0002g0013 a0001c0003t0002g0004 a0001c0005t0001g0005 a0001c0014t0001g0030 a0001c0015t0001g0027	5	40	0.1250	18	c.302 others(39): Show c.302-221149_302-221148insTTTTTTTTTTTTTTTTTT	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79304193	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03209.hp1 HG02965.hp1 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0008 a0001c0007 a0002c0008	a0001c0007t0001 a0002c0008t0001 a0001c0007t0001 a0002c0008t0001	a0001c0007t0001g0040 a0002c0008t0001g0037 a0001c0007t0001g0040 a0002c0008t0001g0037	2	40	0.0500	18	c.301 others(39): Show c.301+148826_301+148827insGACACACACACACACACA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar
MAGI2_chr7_78012055_79458667	79304197	G G	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTC	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0011 a0001c0003t0001g0011	1	40	0.0250	18	c.301 others(39): Show c.301+148822_301+148823insGACACACACACACACACA	MAGI2	ENSG00000187391.23	transcript	ENST00000354212.9	protein_coding	1/21			chr7	TogoVar

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