regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MS4A13_chr11_60510392_60547721 | 60522227 | G | GATGTATA others(11): Show |
intron_variant | MODIFIER | NA18943.hp2 NA19056.hp2 |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0030 | 2 | 422 | 0.0047 | 18 | c.130 others(35): Show |
MS4A13 | ENSG00000204979.8 | transcript | ENST00000378186.7 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A13_chr11_60510392_60547721 | 60522235 | G | GATGTATA others(11): Show |
intron_variant | MODIFIER | HG02723.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0061 | 1 | 422 | 0.0024 | 18 | c.130 others(35): Show |
MS4A13 | ENSG00000204979.8 | transcript | ENST00000378186.7 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A13_chr11_60510392_60547721 | 60527408 | C | CTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG02135.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0257 | 1 | 422 | 0.0024 | 18 | c.307 others(35): Show |
MS4A13 | ENSG00000204979.8 | transcript | ENST00000378186.7 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A13_chr11_60510392_60547721 | 60527410 | C | CTCTGTGT others(11): Show |
intron_variant | MODIFIER | NA18998.hp2 NA19083.hp1 |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0003 | a0002c0002t0001g0279a0002c0002t0003g0046 | 2 | 422 | 0.0047 | 18 | c.307 others(35): Show |
MS4A13 | ENSG00000204979.8 | transcript | ENST00000378186.7 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A4A_chr11_60275666_60313970 | 60294892 | A | ACTACTAC others(11): Show |
intron_variant | MODIFIER | HG00621.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0147 | 1 | 430 | 0.0023 | 18 | c.202 others(35): Show |
MS4A4A | ENSG00000110079.19 | transcript | ENST00000337908.5 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A4A_chr11_60275666_60313970 | 60294892 | A | ACTACTAC others(11): Show |
intron_variant | MODIFIER | HG00741.hp2 HG01167.hp2 HG01993.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0017a0001c0001t0001g0078a0001c0001t0001g0080others(4): Show | 9 | 430 | 0.0209 | 18 | c.202 others(35): Show |
MS4A4A | ENSG00000110079.19 | transcript | ENST00000337908.5 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A4A_chr11_60275666_60313970 | 60294892 | A | ACTACTTC others(11): Show |
intron_variant | MODIFIER | NA18940.hp2 NA19063.hp2 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0004 | a0001c0001t0001g0093a0003c0003t0004g0211 | 2 | 430 | 0.0047 | 18 | c.202 others(35): Show |
MS4A4A | ENSG00000110079.19 | transcript | ENST00000337908.5 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A4A_chr11_60275666_60313970 | 60294892 | A | ACTTCTTC others(11): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00597.hp1 HG00597.hp2 others(7): Show |
a0001a0002a0003 | a0001c0004a0002c0002a0003c0003 | a0001c0004t0003a0002c0002t0001a0003c0003t0002others(1): Show | a0001c0004t0003g0175a0001c0004t0003g0176a0001c0004t0003g0185others(6): Show | 10 | 430 | 0.0233 | 18 | c.202 others(35): Show |
MS4A4A | ENSG00000110079.19 | transcript | ENST00000337908.5 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MS4A4E_chr11_60195270_60248137 | 60232284 | A | AACACACA others(11): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00733.hp1 HG00738.hp2 others(38): Show |
a0001a0006a0009 | a0001c0001a0001c0007a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(6): Show | a0001c0001t0001g0002a0001c0001t0001g0010a0001c0001t0001g0015others(24): Show | 41 | 410 | 0.1000 | 18 | c.-16 others(35): Show |
MS4A4E | ENSG00000214787.11 | transcript | ENST00000651255.1 | protein_coding | 1/8 | chr11 | TogoVar | ||||||
MS4A8_chr11_60694612_60720807 | 60713865 | C | CTTGAGAT others(11): Show |
intron_variant | MODIFIER | HG03098.hp1 | a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0136 | 1 | 402 | 0.0025 | 18 | c.535 others(35): Show |
MS4A8 | ENSG00000166959.8 | transcript | ENST00000300226.7 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
MSANTD4_chr11_106002899_106027240 | 106022839 | A | ATTTTTTT others(11): Show |
upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp1 NA18943.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0001a0001c0001t0001g0022a0001c0001t0006g0004 | 4 | 384 | 0.0104 | 18 | c.-20 others(29): Show |
MSANTD4 | ENSG00000170903.12 | transcript | ENST00000301919.9 | protein_coding | 600 | chr11 | TogoVar | ||||||
MSANTD4_chr11_106002899_106027240 | 106022866 | T | TTTTTTTT others(11): Show |
upstream_gene_variant | MODIFIER | NA18993.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 384 | 0.0026 | 18 | c.-20 others(29): Show |
MSANTD4 | ENSG00000170903.12 | transcript | ENST00000301919.9 | protein_coding | 627 | chr11 | TogoVar | ||||||
MSH2_chr2_47398156_47488223 | 47413548 | G | GTTTTTTT others(11): Show |
intron_variant | MODIFIER | NA18973.hp2 NA19004.hp2 NA19087.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0119a0001c0001t0001g0161a0001c0001t0001g0316 | 3 | 370 | 0.0081 | 18 | c.793 others(33): Show |
MSH2 | ENSG00000095002.15 | transcript | ENST00000233146.7 | protein_coding | 4/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MSH2_chr2_47398156_47488223 | 47449015 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02155.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0259 | 1 | 370 | 0.0027 | 18 | c.138 others(37): Show |
MSH2 | ENSG00000095002.15 | transcript | ENST00000233146.7 | protein_coding | 8/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MSH2_chr2_47398156_47488223 | 47480202 | T | TCTTCCTC others(11): Show |
intron_variant | MODIFIER | HG02717.hp2 HG02818.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0002 | a0001c0001t0002g0170a0002c0003t0002g0171 | 2 | 370 | 0.0054 | 18 | c.245 others(35): Show |
MSH2 | ENSG00000095002.15 | transcript | ENST00000233146.7 | protein_coding | 14/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80654899 | G | GCAGCGCC others(11): Show |
conservative_inframe_insertion | MODERATE | HG02630.hp1 HG03225.hp2 NA19030.hp1 others(1): Show |
a0013a0037 | a0013c0011a0037c0027 | a0013c0011t0005a0037c0027t0023 | a0013c0011t0005g0013a0013c0011t0005g0014a0013c0011t0005g0029others(1): Show | 4 | 362 | 0.0111 | 18 | c.177 others(25): Show |
p.Ala others(29): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 1/24 | 254/4443 | 178/3414 | 60/1137 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
MSH3_chr5_80649652_80881815 | 80654905 | G | GCCGCAGC others(11): Show |
conservative_inframe_insertion | MODERATE | NA18948.hp2 NA18962.hp2 |
a0015 | a0015c0021 | a0015c0021t0004 | a0015c0021t0004g0242a0015c0021t0004g0271 | 2 | 362 | 0.0055 | 18 | c.189 others(25): Show |
p.Pro others(29): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 1/24 | 266/4443 | 190/3414 | 64/1137 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
MSH3_chr5_80649652_80881815 | 80654905 | G | GCCGCAGC others(11): Show |
conservative_inframe_insertion | MODERATE | HG00642.hp2 HG03942.hp2 |
a0014 | a0014c0022 | a0014c0022t0004 | a0014c0022t0004g0236a0014c0022t0004g0237 | 2 | 362 | 0.0055 | 18 | c.186 others(25): Show |
p.Ala others(29): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 1/24 | 263/4443 | 187/3414 | 63/1137 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
MSH3_chr5_80649652_80881815 | 80654908 | G | GCAGCGCC others(11): Show |
disruptive_inframe_insertion | MODERATE | HG03139.hp1 NA18906.hp2 |
a0031a0039 | a0031c0032a0039c0045 | a0031c0032t0004a0039c0045t0005 | a0031c0032t0004g0020a0039c0045t0005g0028 | 2 | 362 | 0.0055 | 18 | c.186 others(25): Show |
p.Ala others(29): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 1/24 | 280/4443 | 204/3414 | 68/1137 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
MSH3_chr5_80649652_80881815 | 80654908 | G | GCAGCGCC others(11): Show |
conservative_inframe_insertion | MODERATE | HG02148.hp1 | a0024 | a0024c0041 | a0024c0041t0028 | a0024c0041t0028g0258 | 1 | 362 | 0.0028 | 18 | c.189 others(25): Show |
p.Pro others(29): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 1/24 | 266/4443 | 190/3414 | 64/1137 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
MSH3_chr5_80649652_80881815 | 80729460 | G | GTGTGTGT others(11): Show |
intron_variant | MODIFIER | NA18983.hp2 NA19070.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0145a0001c0002t0001g0149 | 2 | 362 | 0.0055 | 18 | c.156 others(35): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80750078 | A | AGAGTGTG others(11): Show |
intron_variant | MODIFIER | HG00558.hp1 | a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0215 | 1 | 362 | 0.0028 | 18 | c.176 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80750078 | A | AGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG00280.hp1 HG01257.hp1 HG01515.hp2 others(13): Show |
a0002a0003a0004others(3): Show | a0002c0003a0003c0004a0004c0005others(3): Show | a0002c0003t0003a0002c0003t0012a0003c0004t0004others(4): Show | a0002c0003t0003g0184a0002c0003t0003g0196a0002c0003t0003g0197others(13): Show | 16 | 362 | 0.0442 | 18 | c.176 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80784212 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | NA18522.hp2 NA19030.hp1 |
a0010a0013 | a0010c0014a0013c0011 | a0010c0014t0011a0013c0011t0005 | a0010c0014t0011g0300a0013c0011t0005g0029 | 2 | 362 | 0.0055 | 18 | c.243 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 17/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80808858 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00544.hp1 HG00597.hp1 others(26): Show |
a0003a0004a0007others(6): Show | a0003c0004a0003c0023a0004c0005others(8): Show | a0003c0004t0004a0003c0004t0010a0003c0023t0004others(10): Show | a0003c0004t0004g0001a0003c0004t0004g0233a0003c0004t0004g0238others(25): Show | 29 | 362 | 0.0801 | 18 | c.265 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80808873 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG00558.hp1 HG01993.hp2 HG02809.hp2 others(2): Show |
a0002a0034 | a0002c0003a0034c0030 | a0002c0003t0003a0002c0003t0031a0034c0030t0009 | a0002c0003t0003g0208a0002c0003t0003g0215a0002c0003t0003g0218others(2): Show | 5 | 362 | 0.0138 | 18 | c.265 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH3_chr5_80649652_80881815 | 80810172 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG00544.hp2 HG01255.hp2 HG01358.hp1 others(4): Show |
a0001a0002a0004others(2): Show | a0001c0001a0002c0003a0004c0005others(2): Show | a0001c0001t0006a0002c0003t0003a0004c0005t0007others(2): Show | a0001c0001t0006g0332a0001c0001t0006g0344a0002c0003t0003g0202others(4): Show | 7 | 362 | 0.0193 | 18 | c.265 others(37): Show |
MSH3 | ENSG00000113318.11 | transcript | ENST00000265081.7 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
MSH4_chr1_75791882_75918242 | 75854007 | G | GTATATAT others(11): Show |
intron_variant | MODIFIER | HG01123.hp1 HG02004.hp2 |
a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0079a0005c0006t0001g0080 | 2 | 332 | 0.0060 | 18 | c.123 others(37): Show |
MSH4 | ENSG00000057468.7 | transcript | ENST00000263187.4 | protein_coding | 8/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
MSH4_chr1_75791882_75918242 | 75854011 | G | GTATATAT others(11): Show |
intron_variant | MODIFIER | HG00099.hp2 HG01884.hp1 HG02055.hp1 others(9): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0083a0002c0003t0001g0085a0002c0003t0001g0092others(9): Show | 12 | 332 | 0.0361 | 18 | c.123 others(37): Show |
MSH4 | ENSG00000057468.7 | transcript | ENST00000263187.4 | protein_coding | 8/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
MSH4_chr1_75791882_75918242 | 75885051 | G | GTATATAT others(11): Show |
intron_variant | MODIFIER | HG01884.hp2 HG02559.hp2 HG02896.hp1 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0005a0001c0002t0001g0006a0001c0002t0001g0007others(1): Show | 4 | 332 | 0.0121 | 18 | c.210 others(37): Show |
MSH4 | ENSG00000057468.7 | transcript | ENST00000263187.4 | protein_coding | 15/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
MSH4_chr1_75791882_75918242 | 75907684 | C | CTCTCTAT others(11): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG01099.hp1 others(15): Show |
a0002 | a0002c0003a0002c0009 | a0002c0003t0001a0002c0009t0001 | a0002c0003t0001g0001a0002c0003t0001g0010a0002c0003t0001g0017others(14): Show | 18 | 332 | 0.0542 | 18 | c.262 others(37): Show |
MSH4 | ENSG00000057468.7 | transcript | ENST00000263187.4 | protein_coding | 19/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
MSH5_chr6_31735005_31767676 | 31735807 | C | CCACACAC others(11): Show |
upstream_gene_variant | MODIFIER | NA19003.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0220 | 1 | 397 | 0.0025 | 18 | c.-42 others(29): Show |
MSH5 | ENSG00000204410.16 | transcript | ENST00000375750.9 | protein_coding | 4197 | chr6 | TogoVar | ||||||
MSH5_chr6_31735005_31767676 | 31746080 | T | TTGTGTGT others(11): Show |
intron_variant | MODIFIER | HG00621.hp1 HG00741.hp2 HG01243.hp1 others(19): Show |
a0001a0002a0009others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(2): Show | a0001c0001t0001g0320a0001c0002t0001g0023a0001c0002t0001g0028others(14): Show | 22 | 397 | 0.0554 | 18 | c.766 others(33): Show |
MSH5 | ENSG00000204410.16 | transcript | ENST00000375750.9 | protein_coding | 9/24 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
MSH5_chr6_31735005_31767676 | 31746113 | T | TGTGTGTG others(11): Show |
intron_variant | MODIFIER | NA19030.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0272 | 1 | 397 | 0.0025 | 18 | c.766 others(33): Show |
MSH5 | ENSG00000204410.16 | transcript | ENST00000375750.9 | protein_coding | 9/24 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
MSH6_chr2_47778145_47811953 | 47788906 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | NA20805.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0245 | 1 | 390 | 0.0026 | 18 | c.261 others(35): Show |
MSH6 | ENSG00000116062.19 | transcript | ENST00000234420.11 | protein_coding | 1/9 | chr2 | TogoVar | ||||||
MSH6_chr2_47778145_47811953 | 47788906 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG03704.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0271 | 1 | 390 | 0.0026 | 18 | c.261 others(35): Show |
MSH6 | ENSG00000116062.19 | transcript | ENST00000234420.11 | protein_coding | 1/9 | chr2 | TogoVar | ||||||
MSH6_chr2_47778145_47811953 | 47788916 | T | TTTTTGTT others(11): Show |
intron_variant | MODIFIER | NA18982.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0226 | 1 | 390 | 0.0026 | 18 | c.261 others(35): Show |
MSH6 | ENSG00000116062.19 | transcript | ENST00000234420.11 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MSH6_chr2_47778145_47811953 | 47801361 | G | GTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01358.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0063 | 1 | 390 | 0.0026 | 18 | c.317 others(35): Show |
MSH6 | ENSG00000116062.19 | transcript | ENST00000234420.11 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
MSI2_chr17_57251523_57689689 | 57440413 | C | CGTGTGTG others(11): Show |
intron_variant | MODIFIER | NA18948.hp1 NA19065.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0142a0001c0001t0002g0087 | 2 | 168 | 0.0119 | 18 | c.405 others(37): Show |
MSI2 | ENSG00000153944.12 | transcript | ENST00000284073.7 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
MSI2_chr17_57251523_57689689 | 57502602 | G | GATATATA others(11): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02109.hp1 HG03139.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0008a0001c0001t0012others(1): Show | a0001c0001t0007g0079a0001c0001t0008g0029a0001c0001t0012g0018others(2): Show | 5 | 168 | 0.0298 | 18 | c.406 others(37): Show |
MSI2 | ENSG00000153944.12 | transcript | ENST00000284073.7 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
MSI2_chr17_57251523_57689689 | 57502636 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | HG00280.hp1 HG04199.hp1 NA19010.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0007a0001c0001t0015 | a0001c0001t0005g0060a0001c0001t0007g0042a0001c0001t0015g0157 | 3 | 168 | 0.0179 | 18 | c.406 others(37): Show |
MSI2 | ENSG00000153944.12 | transcript | ENST00000284073.7 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
MSI2_chr17_57251523_57689689 | 57526356 | G | GGGGTGTG others(11): Show |
intron_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0132 | 1 | 168 | 0.0060 | 18 | c.406 others(35): Show |
MSI2 | ENSG00000153944.12 | transcript | ENST00000284073.7 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
MSI2_chr17_57251523_57689689 | 57618072 | A | AAATAATA others(11): Show |
intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0001 | a0001c0001t0064 | a0001c0001t0064g0062 | 1 | 168 | 0.0060 | 18 | c.652 others(35): Show |
MSI2 | ENSG00000153944.12 | transcript | ENST00000284073.7 | protein_coding | 9/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
MSL1_chr17_40116971_40141917 | 40118724 | C | CATATATA others(11): Show |
upstream_gene_variant | MODIFIER | HG01515.hp2 HG01517.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 2 | 356 | 0.0056 | 18 | c.-38 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3246 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140314 | C | CAACACAC others(11): Show |
downstream_gene_variant | MODIFIER | NA19066.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 356 | 0.0028 | 18 | c.*59 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3398 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140317 | A | AACACACA others(11): Show |
downstream_gene_variant | MODIFIER | HG00741.hp2 HG02145.hp1 HG02572.hp2 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(2): Show | 6 | 356 | 0.0169 | 18 | c.*59 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3401 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140331 | C | CACACACA others(11): Show |
downstream_gene_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0002 | a0001c0002t0018 | a0001c0002t0018g0052 | 1 | 356 | 0.0028 | 18 | c.*59 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3415 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140348 | A | ACACACAC others(11): Show |
downstream_gene_variant | MODIFIER | HG00609.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 356 | 0.0028 | 18 | c.*59 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3432 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140375 | C | CACACACA others(11): Show |
downstream_gene_variant | MODIFIER | NA19066.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 356 | 0.0028 | 18 | c.*60 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3459 | chr17 | TogoVar | ||||||
MSL1_chr17_40116971_40141917 | 40140393 | C | CCAACACA others(11): Show |
downstream_gene_variant | MODIFIER | HG06807.hp2 | a0001 | a0001c0002 | a0001c0002t0009 | a0001c0002t0009g0017 | 1 | 356 | 0.0028 | 18 | c.*60 others(29): Show |
MSL1 | ENSG00000188895.12 | transcript | ENST00000398532.9 | protein_coding | 3477 | chr17 | TogoVar |