view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SETD6_chr16_58510517_58528842 | 58513607 | C | CCTTATGT others(11): Show |
upstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp2 others(127): Show |
a0001a0004 | a0001c0001a0001c0003a0004c0006 | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(20): Show | a0001c0001t0002g0001 a0001c0001t0002g0033 a0001c0001t0002g0058 others(31): Show |
130 | 426 | 0.3052 | 18 | c.-19 others(29): Show |
SETD6 | ENSG00000103037.12 | transcript | ENST00000219315.9 | protein_coding | 1909 | chr16 | TogoVar | |||||||
SETD7_chr4_139501038_139561219 | 139544797 | A | AGTGTGTG others(11): Show |
intron_variant | MODIFIER | HG03195.hp2 HG04199.hp2 |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0041 | a0001c0001t0009g0146 a0001c0001t0041g0214 |
2 | 316 | 0.0063 | 18 | c.170 others(35): Show |
SETD7 | ENSG00000145391.14 | transcript | ENST00000274031.8 | protein_coding | 2/7 | chr4 | TogoVar | |||||||
SETD9_chr5_56904596_56922348 | 56908069 | A | ATTTTTTT others(11): Show |
upstream_gene_variant | MODIFIER | HG02717.hp2 HG02809.hp1 HG03209.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0005 a0002c0002t0001g0008 |
5 | 426 | 0.0117 | 18 | c.-15 others(29): Show |
SETD9 | ENSG00000155542.12 | transcript | ENST00000285947.5 | protein_coding | 1526 | chr5 | TogoVar | |||||||
SETDB1_chr1_150921363_150969737 | 150923910 | C | CAAAAAAA others(11): Show |
upstream_gene_variant | MODIFIER | HG01884.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0101 | 1 | 352 | 0.0028 | 18 | c.-26 others(29): Show |
SETDB1 | ENSG00000143379.13 | transcript | ENST00000692827.1 | protein_coding | 2452 | chr1 | TogoVar | |||||||
SETDB1_chr1_150921363_150969737 | 150931261 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG03209.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027 | 1 | 352 | 0.0028 | 18 | c.412 others(35): Show |
SETDB1 | ENSG00000143379.13 | transcript | ENST00000692827.1 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SETDB2_chr13_49439274_49500003 | 49441221 | G | GTATATAT others(11): Show |
upstream_gene_variant | MODIFIER | HG01106.hp1 HG01257.hp2 HG02572.hp1 others(6): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0009a0001c0002t0027a0003c0004t0005 | a0001c0001t0009g0062 a0001c0001t0009g0077 a0001c0002t0027g0333 others(6): Show |
9 | 406 | 0.0222 | 18 | c.-39 others(29): Show |
SETDB2 | ENSG00000136169.17 | transcript | ENST00000611815.2 | protein_coding | 3052 | chr13 | TogoVar | |||||||
SETDB2_chr13_49439274_49500003 | 49471913 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG02015.hp2 NA19062.hp1 |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0346 a0001c0002t0004g0379 |
2 | 406 | 0.0049 | 18 | c.305 others(35): Show |
SETDB2 | ENSG00000136169.17 | transcript | ENST00000611815.2 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SETSIP_chr1_92069533_92080411 | 92071265 | T | TACACACA others(11): Show |
downstream_gene_variant | MODIFIER | HG02486.hp1 | a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0000 | 1 | 363 | 0.0028 | 18 | c.*32 others(29): Show |
SETSIP | ENSG00000230667.7 | transcript | ENST00000596516.3 | protein_coding | 3267 | chr1 | TogoVar | |||||||
SEZ6L_chr22_26164462_26388596 | 26316905 | G | GAAAGAAA others(11): Show |
intron_variant | MODIFIER | HG00323.hp2 HG00735.hp1 HG01070.hp1 others(28): Show |
a0001a0002a0005others(1): Show | a0001c0009a0002c0002a0002c0005others(6): Show | a0001c0009t0006a0002c0002t0001a0002c0002t0002others(16): Show | a0001c0009t0006g0114 a0002c0002t0001g0003 a0002c0002t0001g0020 others(28): Show |
31 | 240 | 0.1292 | 18 | c.201 others(37): Show |
SEZ6L | ENSG00000100095.19 | transcript | ENST00000248933.11 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SEZ6L_chr22_26164462_26388596 | 26345439 | C | CAAAGCAT others(11): Show |
intron_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0197 | 1 | 240 | 0.0042 | 18 | c.221 others(37): Show |
SEZ6L | ENSG00000100095.19 | transcript | ENST00000248933.11 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SEZ6L_chr22_26164462_26388596 | 26348646 | A | AAGAAAGA others(11): Show |
intron_variant | MODIFIER | HG02040.hp2 HG03491.hp1 NA18973.hp1 others(1): Show |
a0001a0002a0007 | a0001c0001a0002c0005a0007c0019 | a0001c0001t0002a0002c0005t0005a0007c0019t0003 | a0001c0001t0002g0086 a0001c0001t0002g0219 a0002c0005t0005g0205 others(1): Show |
4 | 240 | 0.0167 | 18 | c.240 others(35): Show |
SEZ6L | ENSG00000100095.19 | transcript | ENST00000248933.11 | protein_coding | 11/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SEZ6L_chr22_26164462_26388596 | 26348707 | C | CAAGGGAG others(11): Show |
intron_variant | MODIFIER | HG02258.hp1 HG02559.hp2 HG02647.hp1 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0003a0001c0006a0002c0005others(3): Show | a0001c0003t0001a0001c0003t0004a0001c0006t0012others(7): Show | a0001c0003t0001g0103 a0001c0003t0001g0183 a0001c0003t0004g0182 others(9): Show |
12 | 240 | 0.0500 | 18 | c.240 others(35): Show |
SEZ6L | ENSG00000100095.19 | transcript | ENST00000248933.11 | protein_coding | 11/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SEZ6L_chr22_26164462_26388596 | 26369341 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02258.hp1 HG02809.hp1 others(3): Show |
a0001a0003a0005 | a0001c0001a0001c0003a0003c0004others(1): Show | a0001c0001t0004a0001c0003t0004a0003c0004t0004others(2): Show | a0001c0001t0004g0173 a0001c0003t0004g0182 a0001c0003t0004g0210 others(3): Show |
6 | 240 | 0.0250 | 18 | c.279 others(37): Show |
SEZ6L | ENSG00000100095.19 | transcript | ENST00000248933.11 | protein_coding | 13/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SF3A3_chr1_37951975_37995022 | 37983586 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG00423.hp2 HG00558.hp2 HG00621.hp1 others(39): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0002g0168 a0001c0001t0003g0208 a0001c0001t0003g0209 others(38): Show |
42 | 400 | 0.1050 | 18 | c.468 others(33): Show |
SF3A3 | ENSG00000183431.12 | transcript | ENST00000373019.5 | protein_coding | 6/16 | chr1 | TogoVar | |||||||
SF3B1_chr2_197384784_197440028 | 197418234 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01099.hp1 HG01106.hp2 HG01358.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0066 a0001c0001t0001g0160 a0001c0001t0001g0237 others(3): Show |
6 | 344 | 0.0174 | 18 | c.495 others(33): Show |
SF3B1 | ENSG00000115524.17 | transcript | ENST00000335508.11 | protein_coding | 5/24 | chr2 | TogoVar | |||||||
SFI1_chr22_31491536_31623588 | 31562983 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01891.hp1 HG03139.hp2 others(1): Show |
a0006 | a0006c0008a0006c0013 | a0006c0008t0001a0006c0013t0001 | a0006c0008t0001g0317 a0006c0008t0001g0320 a0006c0013t0001g0157 others(1): Show |
4 | 322 | 0.0124 | 18 | c.765 others(35): Show |
SFI1 | ENSG00000198089.16 | transcript | ENST00000400288.7 | protein_coding | 8/32 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SFI1_chr22_31491536_31623588 | 31582236 | A | ATATATAT others(11): Show |
intron_variant | MODIFIER | HG02040.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0282 | 1 | 322 | 0.0031 | 18 | c.124 others(37): Show |
SFI1 | ENSG00000198089.16 | transcript | ENST00000400288.7 | protein_coding | 12/32 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SFI1_chr22_31491536_31623588 | 31593987 | C | CGAGGGAG others(11): Show |
intron_variant | MODIFIER | HG02109.hp2 HG02622.hp2 HG03209.hp2 others(4): Show |
a0007 | a0007c0007a0007c0023a0007c0024 | a0007c0007t0001a0007c0023t0001a0007c0024t0001 | a0007c0007t0001g0296 a0007c0007t0001g0297 a0007c0007t0001g0301 others(4): Show |
7 | 322 | 0.0217 | 18 | c.154 others(37): Show |
SFI1 | ENSG00000198089.16 | transcript | ENST00000400288.7 | protein_coding | 15/32 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SFI1_chr22_31491536_31623588 | 31598716 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG02148.hp2 NA18998.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0073 a0002c0002t0001g0079 |
2 | 322 | 0.0062 | 18 | c.154 others(37): Show |
SFI1 | ENSG00000198089.16 | transcript | ENST00000400288.7 | protein_coding | 15/32 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SFI1_chr22_31491536_31623588 | 31612426 | T | TATATATA others(11): Show |
intron_variant | MODIFIER | HG01261.hp1 HG02132.hp2 |
a0002a0012 | a0002c0002a0012c0037 | a0002c0002t0001a0012c0037t0001 | a0002c0002t0001g0100 a0012c0037t0001g0082 |
2 | 322 | 0.0062 | 18 | c.249 others(35): Show |
SFI1 | ENSG00000198089.16 | transcript | ENST00000400288.7 | protein_coding | 24/32 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SFMBT1_chr3_52898572_53051073 | 52928619 | C | CATATATA others(11): Show |
intron_variant | MODIFIER | HG01074.hp1 HG01891.hp2 HG02257.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0323 a0001c0001t0004g0324 a0001c0001t0004g0325 others(2): Show |
5 | 328 | 0.0152 | 18 | c.898 others(33): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 8/20 | chr3 | TogoVar | |||||||
SFMBT1_chr3_52898572_53051073 | 52945136 | T | TAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG02155.hp2 NA19066.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0172 a0001c0001t0001g0246 |
2 | 328 | 0.0061 | 18 | c.124 others(35): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 3/20 | chr3 | TogoVar | |||||||
SFMBT1_chr3_52898572_53051073 | 52948825 | A | ATTTTTTT others(11): Show |
intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0306 | 1 | 328 | 0.0031 | 18 | c.124 others(35): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 3/20 | chr3 | TogoVar | |||||||
SFMBT1_chr3_52898572_53051073 | 52982039 | A | ACCCATGA others(11): Show |
intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0153 | 1 | 328 | 0.0031 | 18 | c.-13 others(39): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 1/20 | chr3 | TogoVar | |||||||
SFMBT1_chr3_52898572_53051073 | 53006628 | C | CAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01943.hp2 HG03486.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0288 a0001c0001t0004g0315 a0001c0001t0004g0316 |
3 | 328 | 0.0092 | 18 | c.-13 others(39): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 1/20 | chr3 | TogoVar | |||||||
SFMBT1_chr3_52898572_53051073 | 53040968 | A | ATTTTTTT others(11): Show |
intron_variant | MODIFIER | homoSapiens_chm13v2.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0051 | 1 | 328 | 0.0031 | 18 | c.-13 others(37): Show |
SFMBT1 | ENSG00000163935.14 | transcript | ENST00000394752.8 | protein_coding | 1/20 | chr3 | TogoVar | |||||||
SFMBT2_chr10_7153624_7416034 | 7186459 | C | CACACACA others(11): Show |
intron_variant | MODIFIER | HG01255.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0039 | 1 | 144 | 0.0069 | 18 | c.180 others(37): Show |
SFMBT2 | ENSG00000198879.13 | transcript | ENST00000397167.6 | protein_coding | 16/20 | chr10 | TogoVar | |||||||
SFMBT2_chr10_7153624_7416034 | 7186459 | C | CACACATA others(11): Show |
intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0003 | a0001c0003t0026 | a0001c0003t0026g0020 | 1 | 144 | 0.0069 | 18 | c.180 others(37): Show |
SFMBT2 | ENSG00000198879.13 | transcript | ENST00000397167.6 | protein_coding | 16/20 | chr10 | TogoVar | |||||||
SFMBT2_chr10_7153624_7416034 | 7186459 | C | CACATATA others(11): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0067 | 1 | 144 | 0.0069 | 18 | c.180 others(37): Show |
SFMBT2 | ENSG00000198879.13 | transcript | ENST00000397167.6 | protein_coding | 16/20 | chr10 | TogoVar | |||||||
SFN_chr1_26858149_26869456 | 26868248 | T | TTCTCTCT others(11): Show |
downstream_gene_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0000 | 1 | 332 | 0.0030 | 18 | c.*42 others(29): Show |
SFN | ENSG00000175793.12 | transcript | ENST00000339276.6 | protein_coding | 3793 | chr1 | TogoVar | |||||||
SFRP2_chr4_153775591_153794083 | 153789505 | G | GGTGTGTG others(11): Show |
upstream_gene_variant | MODIFIER | HG02129.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 434 | 0.0023 | 18 | c.-67 others(27): Show |
SFRP2 | ENSG00000145423.5 | transcript | ENST00000274063.5 | protein_coding | 423 | chr4 | TogoVar | |||||||
SFSWAP_chr12_131706090_131804738 | 131738885 | C | CTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG01943.hp1 HG03041.hp2 HG03195.hp2 others(1): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0002 | a0001c0001t0001g0166 a0001c0001t0001g0277 a0001c0004t0002g0306 others(1): Show |
4 | 318 | 0.0126 | 18 | c.108 others(39): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 7/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SFSWAP_chr12_131706090_131804738 | 131740967 | T | TTTTTTTT others(11): Show |
intron_variant | MODIFIER | HG02071.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0198 | 1 | 318 | 0.0031 | 18 | c.108 others(39): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 7/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SFSWAP_chr12_131706090_131804738 | 131783792 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG00741.hp1 HG01099.hp2 HG01346.hp1 others(4): Show |
a0001a0011 | a0001c0001a0001c0002a0011c0017 | a0001c0001t0001a0001c0002t0001a0011c0017t0001 | a0001c0001t0001g0176 a0001c0001t0001g0200 a0001c0002t0001g0294 others(4): Show |
7 | 318 | 0.0220 | 18 | c.240 others(37): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 14/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SFT2D3_chr2_127696497_127710242 | 127700120 | G | GTGTGTGT others(11): Show |
upstream_gene_variant | MODIFIER | HG02109.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0000 | 1 | 386 | 0.0026 | 18 | c.-14 others(29): Show |
SFT2D3 | ENSG00000173349.6 | transcript | ENST00000310981.6 | protein_coding | 1376 | chr2 | TogoVar | |||||||
SFT2D3_chr2_127696497_127710242 | 127700138 | A | ATATATAT others(11): Show |
upstream_gene_variant | MODIFIER | HG00733.hp1 HG02257.hp2 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0000 | 2 | 386 | 0.0052 | 18 | c.-13 others(29): Show |
SFT2D3 | ENSG00000173349.6 | transcript | ENST00000310981.6 | protein_coding | 1358 | chr2 | TogoVar | |||||||
SFT2D3_chr2_127696497_127710242 | 127701591 | G | GGCCGCGG others(11): Show |
conservative_inframe_insertion | MODERATE | NA18612.hp2 NA18947.hp2 NA19075.hp2 others(1): Show |
a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0000 | 4 | 386 | 0.0104 | 18 | c.73_ others(23): Show |
p.Pro others(11): Show |
SFT2D3 | ENSG00000173349.6 | transcript | ENST00000310981.6 | protein_coding | 1/1 | 123/3746 | 91/648 | 31/215 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||
SFTPC_chr8_22156798_22169479 | 22165882 | C | CGTGTGTG others(11): Show |
downstream_gene_variant | MODIFIER | HG00609.hp1 HG02071.hp1 HG02293.hp2 others(17): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0002a0003c0003t0002 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 others(8): Show |
20 | 466 | 0.0429 | 18 | c.*16 others(29): Show |
SFTPC | ENSG00000168484.13 | transcript | ENST00000679463.1 | protein_coding | 1404 | chr8 | TogoVar | |||||||
SFTPD_chr10_79932740_79954105 | 79933422 | T | TTTATTAT others(11): Show |
downstream_gene_variant | MODIFIER | HG01243.hp2 HG02572.hp1 HG02615.hp2 others(5): Show |
a0001a0002 | a0001c0001a0002c0005a0002c0008 | a0001c0001t0001a0002c0005t0001a0002c0008t0001 | a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0012 others(3): Show |
8 | 424 | 0.0189 | 18 | c.*44 others(29): Show |
SFTPD | ENSG00000133661.17 | transcript | ENST00000372292.8 | protein_coding | 4317 | chr10 | TogoVar | |||||||
SFXN1_chr5_175473560_175534742 | 175505537 | C | CAATAATA others(11): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00642.hp1 HG01192.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0044 | a0001c0001t0001g0011 a0001c0001t0001g0055 a0001c0001t0001g0095 others(3): Show |
6 | 372 | 0.0161 | 18 | c.165 others(35): Show |
SFXN1 | ENSG00000164466.13 | transcript | ENST00000321442.10 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SFXN4_chr10_119135767_119170714 | 119140431 | T | TGATCCAC others(11): Show |
downstream_gene_variant | MODIFIER | NA18992.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0073 | 1 | 432 | 0.0023 | 18 | c.*81 others(27): Show |
SFXN4 | ENSG00000183605.17 | transcript | ENST00000355697.7 | protein_coding | 335 | chr10 | TogoVar | |||||||
SFXN5_chr2_72937036_73076712 | 73046057 | A | AAAAACAA others(11): Show |
intron_variant | MODIFIER | HG00438.hp1 HG00735.hp1 HG00738.hp2 others(72): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 others(72): Show |
75 | 250 | 0.3000 | 18 | c.172 others(35): Show |
SFXN5 | ENSG00000144040.13 | transcript | ENST00000272433.7 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
SFXN5_chr2_72937036_73076712 | 73050388 | G | GCGCACAC others(11): Show |
intron_variant | MODIFIER | HG02602.hp2 HG02615.hp2 HG03017.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0002g0032 others(1): Show |
4 | 250 | 0.0160 | 18 | c.171 others(35): Show |
SFXN5 | ENSG00000144040.13 | transcript | ENST00000272433.7 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
SFXN5_chr2_72937036_73076712 | 73050388 | G | GCGCGCAC others(11): Show |
intron_variant | MODIFIER | HG00735.hp1 HG00738.hp2 HG01981.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0014a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0014g0246 a0001c0002t0001g0040 a0001c0002t0001g0062 others(7): Show |
10 | 250 | 0.0400 | 18 | c.171 others(35): Show |
SFXN5 | ENSG00000144040.13 | transcript | ENST00000272433.7 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
SFXN5_chr2_72937036_73076712 | 73050388 | G | GCGCGCGC others(11): Show |
intron_variant | MODIFIER | HG01884.hp2 HG02280.hp2 HG02965.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0005a0001c0001t0016others(1): Show | a0001c0001t0003g0242 a0001c0001t0005g0243 a0001c0001t0016g0249 others(1): Show |
4 | 250 | 0.0160 | 18 | c.171 others(35): Show |
SFXN5 | ENSG00000144040.13 | transcript | ENST00000272433.7 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
SFXN5_chr2_72937036_73076712 | 73050420 | A | ACACACAC others(11): Show |
intron_variant | MODIFIER | HG01261.hp2 HG02723.hp2 HG03139.hp2 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0008 | a0001c0002t0002g0028 a0001c0002t0002g0093 a0001c0002t0008g0027 |
3 | 250 | 0.0120 | 18 | c.171 others(35): Show |
SFXN5 | ENSG00000144040.13 | transcript | ENST00000272433.7 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
SGCA_chr17_50161005_50180928 | 50176651 | C | CAAAAAAA others(11): Show |
downstream_gene_variant | MODIFIER | HG01891.hp1 HG02280.hp2 HG02818.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0015 a0001c0002t0003g0042 a0001c0002t0003g0093 others(1): Show |
6 | 416 | 0.0144 | 18 | c.*95 others(27): Show |
SGCA | ENSG00000108823.17 | transcript | ENST00000262018.8 | protein_coding | 724 | chr17 | TogoVar | |||||||
SGCD_chr5_156322164_156772788 | 156350247 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | NA18985.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0070 | 1 | 150 | 0.0067 | 18 | c.192 others(35): Show |
SGCD | ENSG00000170624.14 | transcript | ENST00000337851.9 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SGCD_chr5_156322164_156772788 | 156406018 | T | TAAAAAAA others(11): Show |
intron_variant | MODIFIER | HG01981.hp1 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0010 | 1 | 150 | 0.0067 | 18 | c.192 others(37): Show |
SGCD | ENSG00000170624.14 | transcript | ENST00000337851.9 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SGCD_chr5_156322164_156772788 | 156406790 | T | TTATATAT others(11): Show |
intron_variant | MODIFIER | HG02040.hp2 NA18990.hp1 NA19030.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0027a0001c0002t0002a0001c0002t0054 | a0001c0001t0027g0011 a0001c0002t0002g0080 a0001c0002t0054g0073 |
3 | 150 | 0.0200 | 18 | c.192 others(37): Show |
SGCD | ENSG00000170624.14 | transcript | ENST00000337851.9 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr5 | TogoVar |