Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
TCF7L1_chr2_85128392_85315387	85294026	A A	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	95	0.0105	18	c.526 others(35): Show c.526-8447_526-8430dupTTTTTTTTTTTTTTTTTT		TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	4/11					INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85299860	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00738.hp2 HG01071.hp2 others(11): Show HG00621.hp1 HG00738.hp2 HG01071.hp2 HG02083.hp1 HG02145.hp1 HG02572.hp2 HG02970.hp1 HG03834.hp1 NA18522.hp1 NA18943.hp1 NA18968.hp2 NA18983.hp1 NA18998.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0096 a0001c0001t0001g0121 a0001c0001t0001g0130 others(11): Show a0001c0001t0001g0096 a0001c0001t0001g0121 a0001c0001t0001g0130 a0001c0001t0001g0183 a0001c0001t0001g0217 a0001c0001t0001g0230 a0001c0001t0002g0125 a0002c0002t0001g0007 a0002c0002t0001g0012 a0002c0002t0001g0038 a0002c0002t0001g0060 a0002c0002t0001g0117 a0002c0002t0002g0011 a0002c0002t0002g0048	14	30	0.4667	18	c.526 others(35): Show c.526-2597_526-2580dupACACACACACACACACAC		TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	4/11					INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L2_chr10_112945247_113172678	112961254	A A	ACCGCCCC others(11): Show ACCGCCCCCCCCCCCCCCC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03098.hp2 HG02970.hp2 HG03098.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0008 a0001c0001 a0007c0008	a0001c0001t0004 a0007c0008t0002 a0001c0001t0004 a0007c0008t0002	a0001c0001t0004g0133 a0007c0008t0002g0015 a0001c0001t0004g0133 a0007c0008t0002g0015	2	45	0.0444	18	c.382 others(35): Show c.382-3300_382-3299insGCCCCCCCCCCCCCCCCC		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	3/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112964742	G G	GTGGTGGT others(11): Show GTGGTGGTGGTGGTGGTGA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00741.hp1 HG01256.hp1 others(5): Show HG00140.hp1 HG00741.hp1 HG01256.hp1 HG01258.hp2 HG01358.hp1 HG02055.hp1 HG02300.hp1 NA20300.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0001t0038 a0005c0009t0002	a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 others(5): Show a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0009g0057 a0001c0001t0012g0169 a0001c0001t0012g0183 a0001c0001t0038g0110 a0005c0009t0002g0105	8	192	0.0417	18	c.450 others(33): Show c.450+151_450+168dupGTGATGGTGGTGGTGGTG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112964778	A A	ATGGTGGT others(11): Show ATGGTGGTGGTGGTGATGG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01243.hp1 HG00642.hp2 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0041 a0001c0001t0001g0044	2	192	0.0104	18	c.450 others(33): Show c.450+169_450+186dupATGGTGGTGGTGGTGGTG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112966184	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03209.hp2 HG03453.hp2 HG03041.hp2 HG03209.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0031 a0001c0001t0002 a0001c0001t0006 a0001c0001t0031	a0001c0001t0002g0142 a0001c0001t0006g0149 a0001c0001t0031g0011 a0001c0001t0002g0142 a0001c0001t0006g0149 a0001c0001t0031g0011	3	20	0.1500	18	c.450 others(35): Show c.450+1570_450+1587dupATATATATATATATATAT		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	112966184	T T	TTATATAT others(11): Show TTATATATATTTATATATA	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02735.hp1 HG03017.hp1 others(2): Show HG02683.hp1 HG02735.hp1 HG03017.hp1 HG03486.hp2 NA19010.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0023 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0023 a0002c0002t0001	a0001c0001t0001g0194 a0001c0001t0002g0155 a0001c0001t0023g0027 others(2): Show a0001c0001t0001g0194 a0001c0001t0002g0155 a0001c0001t0023g0027 a0002c0002t0001g0021 a0002c0002t0001g0028	5	22	0.2273	18	c.450 others(35): Show c.450+1569_450+1570insTTATATATATATATATAT		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	4/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113070269	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	25	0.0400	18	c.552 others(37): Show c.552+30147_552+30164dupATATATATATATATATAT		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073099	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0045 a0001c0001t0045	a0001c0001t0045g0156 a0001c0001t0045g0156	1	63	0.0159	18	c.552 others(37): Show c.552+32987_552+33004dupTGTGTGTGTGTGTGTGTG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073129	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGAGAGA	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0168 a0001c0001t0040g0168	1	139	0.0072	18	c.552 others(37): Show c.552+33004_552+33005insTGTGTGTGTGTGAGAGAG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073129	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGAGA	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0010 a0002c0002t0010	a0002c0002t0010g0106 a0002c0002t0010g0106	1	139	0.0072	18	c.552 others(37): Show c.552+33004_552+33005insTGTGTGTGTGTGTGAGAG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113073129	T T	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03486.hp2 HG02258.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0155 a0001c0001t0006g0013 a0001c0001t0002g0155 a0001c0001t0006g0013	2	140	0.0143	18	c.552 others(37): Show c.552+33004_552+33005insTGTGTGTGTGTGTGTGAG		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCHHL1_chr1_152079141_152094064	152082756	C C	CATATATA others(11): Show CATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG01496.hp1 HG02056.hp1 others(4): Show HG01081.hp2 HG01496.hp1 HG02056.hp1 HG02738.hp1 HG03195.hp1 NA18951.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	7	13	0.5385	18	c.22 others(29): Show c.2210_*2211insATATATATATATATATAT		TCHHL1	ENSG00000182898.4	transcript	ENST00000368806.2	protein_coding					1384		chr1	TogoVar
TCHH_chr1_152101317_152120444	152111699	T T	TTGCTGCT others(11): Show TTGCTGCTCGCGCCTCTCC	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG00099.hp1 HG00280.hp2 HG00323.hp2 others(108): Show HG00099.hp1 HG00280.hp2 HG00323.hp2 HG00544.hp2 HG00597.hp1 HG00609.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02074.hp2 HG02080.hp2 HG02132.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02523.hp2 HG02559.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03654.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 NA18612.hp2 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18943.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18963.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18970.hp2 NA18972.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18992.hp2 NA18993.hp2 NA18994.hp2 NA18999.hp2 NA19005.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19056.hp1 NA19060.hp1 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19074.hp2 NA19075.hp1 NA19080.hp2 NA19084.hp1 NA19088.hp1 NA19090.hp2 NA20752.hp1 NA20805.hp1	a0002 a0007 a0033 others(1): Show a0002 a0007 a0033 a0054	a0002c0002 a0002c0050 a0002c0051 others(5): Show a0002c0002 a0002c0050 a0002c0051 a0002c0052 a0002c0053 a0007c0005 a0033c0037 a0054c0034	a0002c0002t0001 a0002c0050t0001 a0002c0051t0001 others(5): Show a0002c0002t0001 a0002c0050t0001 a0002c0051t0001 a0002c0052t0001 a0002c0053t0001 a0007c0005t0001 a0033c0037t0001 a0054c0034t0001	a0002c0002t0001g0002 a0002c0002t0001g0018 a0002c0002t0001g0052 others(7): Show a0002c0002t0001g0002 a0002c0002t0001g0018 a0002c0002t0001g0052 a0002c0050t0001g0064 a0002c0051t0001g0065 a0002c0052t0001g0066 a0002c0053t0001g0067 a0007c0005t0001g0003 a0033c0037t0001g0056 a0054c0034t0001g0053	111	395	0.2810	18	c.150 others(27): Show c.1500_1517dupGGAGAGGCGCGAGCAGCA	p.Gln others(31): Show p.Gln506_Leu507insGluArgArgGluGlnGln	TCHH	ENSG00000159450.13	transcript	ENST00000614923.2	protein_coding	3/3	1602/6985	1517/5832	506/1943			chr1	TogoVar
TCHH_chr1_152101317_152120444	152111929	C C	CCTGCTCG others(11): Show CCTGCTCGCGCCTCAGCTG	conservative_inframe_insertion conservative_inframe_insertion	MODERATE	HG00738.hp2 HG01070.hp2 HG01081.hp1 others(42): Show HG00738.hp2 HG01070.hp2 HG01081.hp1 HG01123.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01433.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG02135.hp2 HG02165.hp1 HG02257.hp1 HG02647.hp1 HG02818.hp2 HG02970.hp2 HG03195.hp1 HG03491.hp2 HG03669.hp1 HG03710.hp2 HG03831.hp2 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp2 NA18952.hp2 NA18963.hp1 NA18964.hp2 NA18970.hp1 NA18973.hp2 NA18993.hp1 NA18993.hp2 NA19006.hp2 NA19009.hp1 NA19011.hp1 NA19043.hp2 NA19065.hp1 NA19079.hp2 NA19080.hp2 NA19088.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0011 a0014 a0016 a0020 a0026 a0033 a0052	a0001c0001 a0002c0002 a0003c0003 others(9): Show a0001c0001 a0002c0002 a0003c0003 a0004c0006 a0005c0004 a0011c0013 a0014c0014 a0016c0015 a0020c0021 a0026c0024 a0033c0037 a0052c0048	a0001c0001t0002 a0002c0002t0001 a0003c0003t0001 others(9): Show a0001c0001t0002 a0002c0002t0001 a0003c0003t0001 a0004c0006t0002 a0005c0004t0002 a0011c0013t0002 a0014c0014t0002 a0016c0015t0001 a0020c0021t0002 a0026c0024t0002 a0033c0037t0001 a0052c0048t0002	a0001c0001t0002g0001 a0001c0001t0002g0038 a0002c0002t0001g0002 others(11): Show a0001c0001t0002g0001 a0001c0001t0002g0038 a0002c0002t0001g0002 a0002c0002t0001g0018 a0003c0003t0001g0008 a0004c0006t0002g0004 a0005c0004t0002g0006 a0011c0013t0002g0011 a0014c0014t0002g0013 a0016c0015t0001g0014 a0020c0021t0002g0031 a0026c0024t0002g0029 a0033c0037t0001g0056 a0052c0048t0002g0061	45	206	0.2184	18	c.127 others(27): Show c.1270_1287dupCAGCTGAGGCGCGAGCAG	p.Gln others(31): Show p.Gln429_Glu430insGlnLeuArgArgGluGln	TCHH	ENSG00000159450.13	transcript	ENST00000614923.2	protein_coding	3/3	1372/6985	1287/5832	429/1943			chr1	TogoVar
TCHH_chr1_152101317_152120444	152112244	G G	GCTGCTCG others(11): Show GCTGCTCGCGCCTCTCCTC	conservative_inframe_insertion conservative_inframe_insertion	MODERATE	HG02922.hp1 HG02922.hp1	a0040 a0040	a0040c0066 a0040c0066	a0040c0066t0002 a0040c0066t0002	a0040c0066t0002g0085 a0040c0066t0002g0085	1	400	0.0025	18	c.955 others(25): Show c.955_972dupGAGGAGAGGCGCGAGCAG	p.Gln others(31): Show p.Gln324_Gln325insGluGluArgArgGluGln	TCHH	ENSG00000159450.13	transcript	ENST00000614923.2	protein_coding	3/3	1057/6985	972/5832	324/1943			chr1	TogoVar
TCL1A_chr14_95704947_95719125	95708500	A A	AATATATA others(11): Show AATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	353	0.0028	18	c.23 others(29): Show c.2387_*2388insATATATATATATATATAT		TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding					1446		chr14	TogoVar
TCL1A_chr14_95704947_95719125	95708502	A A	AAAAAAAA others(11): Show AAAAAAAATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	250	0.0040	18	c.23 others(29): Show c.2385_*2386insATATATATATATTTTTTT		TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding					1444		chr14	TogoVar
TCL1A_chr14_95704947_95719125	95708502	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	250	0.0040	18	c.23 others(29): Show c.2385_*2386insATATATATATATATTTTT		TCL1A	ENSG00000100721.11	transcript	ENST00000402399.6	protein_coding					1444		chr14	TogoVar
TCN2_chr22_30602174_30632271	30623941	C C	CATATATA others(11): Show CATATATATGTATACATAT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0015 a0005c0005t0015	a0005c0005t0015g0071 a0005c0005t0015g0071	1	443	0.0023	18	c.122 others(35): Show c.1222+859_1222+860insTATATATGTATACATATA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30623975	T T	TGTATACA others(11): Show TGTATACATATATACACAC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0190 a0005c0005t0001g0190	1	361	0.0028	18	c.122 others(35): Show c.1222+892_1222+893insGTATACATATATACACAC		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8						chr22	TogoVar
TCN2_chr22_30602174_30632271	30624001	T T	TGTATACA others(11): Show TGTATACATATATACACAC	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0013 a0013	a0013c0018 a0013c0018	a0013c0018t0002 a0013c0018t0002	a0013c0018t0002g0131 a0013c0018t0002g0131	1	436	0.0023	18	c.122 others(35): Show c.1222+918_1222+919insGTATACATATATACACAC		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8						chr22	TogoVar
TCN2_chr22_30602174_30632271	30624043	T T	TATACACA others(11): Show TATACACACATATACACAC	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp1 NA20129.hp1 HG01069.hp2 HG01071.hp1 NA20129.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0041 a0005c0005t0001g0189 a0005c0005t0001g0041 a0005c0005t0001g0189	3	401	0.0075	18	c.122 others(35): Show c.1222+961_1222+962insTACACACATATACACACA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30624051	C C	CATATATA others(11): Show CATATATATATACATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0200 a0003c0003t0004g0200	1	351	0.0028	18	c.122 others(35): Show c.1222+969_1222+970insTATATATATACATATATA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30624051	C C	CATATATA others(11): Show CATATATATGTATACATAT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0322 a0001c0001t0003g0322	1	351	0.0028	18	c.122 others(35): Show c.1222+969_1222+970insTATATATGTATACATATA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30624051	C C	CATATATG others(11): Show CATATATGTATACATATAT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01515.hp1 HG01517.hp1 others(10): Show HG01256.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02148.hp2 HG02300.hp1 HG02300.hp2 HG02647.hp2 NA20300.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0043 a0003c0003t0004g0044 a0003c0003t0004g0045 others(7): Show a0003c0003t0004g0043 a0003c0003t0004g0044 a0003c0003t0004g0045 a0003c0003t0004g0194 a0003c0003t0004g0210 a0003c0003t0004g0211 a0003c0003t0004g0212 a0003c0003t0004g0214 a0003c0003t0004g0222 a0003c0003t0004g0230	13	363	0.0358	18	c.122 others(35): Show c.1222+969_1222+970insTATATGTATACATATATA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding	8/8					INFO_REALIGN_3_PRIME	chr22	TogoVar
TCN2_chr22_30602174_30632271	30629499	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0047 a0006c0006t0001g0047	1	67	0.0149	18	c.29 others(29): Show c.2978_*2979insAAAAAAAAAAAAAAAAAA		TCN2	ENSG00000185339.10	transcript	ENST00000215838.8	protein_coding					2229		chr22	TogoVar
TCP10L_chr21_32568721_32590523	32583024	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp1 NA19004.hp2 HG00544.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	2	101	0.0198	18	c.145 others(33): Show c.145-627_145-610dupAAAAAAAAAAAAAAAAAA		TCP10L	ENSG00000242220.9	transcript	ENST00000300258.8	protein_coding	2/4						chr21	TogoVar
TCP11L1_chr11_33034572_33078550	33038139	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG02602.hp2 HG02683.hp1 others(5): Show HG00597.hp2 HG02602.hp2 HG02683.hp1 HG02738.hp1 NA18945.hp1 NA18998.hp1 NA19070.hp2 NA19086.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0002 a0001c0003t0001g0037 a0001c0003t0001g0039 others(4): Show a0001c0003t0001g0002 a0001c0003t0001g0037 a0001c0003t0001g0039 a0001c0003t0001g0152 a0001c0003t0001g0155 a0001c0003t0001g0160 a0001c0003t0001g0169	8	164	0.0488	18	c.-16 others(29): Show c.-1678_-1677insTTTTTTTTTTTTTTTTTT		TCP11L1	ENSG00000176148.16	transcript	ENST00000334274.9	protein_coding					1432		chr11	TogoVar
TCP11L2_chr12_106297733_106352003	106349049	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp2 HG03239.hp1 HG02738.hp2 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0235 a0001c0001t0004g0236 a0001c0001t0004g0235 a0001c0001t0004g0236	2	22	0.0909	18	c.25 others(29): Show c.2519_*2520insTTTTTTTTTTTTTTTTTT		TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding					2047		chr12	TogoVar
TCP11X2_chrX_102455315_102476812	102466412	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	130	0.0077	18	c.231 others(33): Show c.231-844_231-843insATATATATATATATATAT		TCP11X2	ENSG00000215029.12	transcript	ENST00000642911.3	protein_coding	3/9						chrX	TogoVar
TCP11_chr6_35113075_35146339	35119355	T T	TACCTGTT others(11): Show TACCTGTTCACTCACAGTC	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG03041.hp2 HG03041.hp2	a0009 a0009	a0009c0010 a0009c0010	a0009c0010t0001 a0009c0010t0001	a0009c0010t0001g0126 a0009c0010t0001g0126	1	410	0.0024	18	c.113 others(27): Show c.1134_1151dupGACTGTGAGTGAACAGGT	p.Val others(31): Show p.Val384_Ser385insThrValSerGluGlnVal	TCP11	ENSG00000124678.20	transcript	ENST00000311875.11	protein_coding	9/10	1300/1855	1151/1512	384/503			chr6	TogoVar
TCTE1_chr6_44273734_44302698	44279748	G G	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0036 a0002c0002t0036	a0002c0002t0036g0220 a0002c0002t0036g0220	1	50	0.0200	18	c.41 others(27): Show c.415_*432dupACACACACACACACACAC		TCTE1	ENSG00000146221.10	transcript	ENST00000371505.5	protein_coding	5/5				432		chr6	TogoVar
TCTN2_chr12_123666113_123713399	123712055	T T	TCACACAC others(11): Show TCACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01081.hp2 HG01175.hp2 others(10): Show HG00735.hp2 HG01081.hp2 HG01175.hp2 HG01981.hp2 HG02451.hp1 HG02698.hp1 HG03688.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 NA18612.hp1 NA18977.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0014 a0001c0001t0002 a0001c0001t0010 a0001c0001t0014	a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 others(9): Show a0001c0001t0002g0002 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0138 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0144 a0001c0001t0002g0148 a0001c0001t0010g0008 a0001c0001t0010g0132 a0001c0001t0014g0002 a0001c0001t0014g0007	13	197	0.0660	18	c.43 others(29): Show c.4342_*4343insCACACACACACACACACA		TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding					3657		chr12	TogoVar
TCTN2_chr12_123666113_123713399	123712076	C C	CACACACA others(11): Show CACACACACACACACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0106 a0001c0001t0004g0106	1	218	0.0046	18	c.43 others(29): Show c.4363_*4364insACACACACACACACACAT		TCTN2	ENSG00000168778.13	transcript	ENST00000303372.7	protein_coding					3678		chr12	TogoVar
TCTN3_chr10_95658401_95698927	95672160	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp1 NA18946.hp1 NA18955.hp2 others(3): Show HG00140.hp1 NA18946.hp1 NA18955.hp2 NA18971.hp1 NA18978.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0003 a0001c0002t0001g0002 a0001c0002t0001g0012 others(1): Show a0001c0001t0001g0003 a0001c0002t0001g0002 a0001c0002t0001g0012 a0001c0002t0001g0045	6	17	0.3529	18	c.159 others(37): Show c.1591-7861_1591-7860insCACACACACACACACACA		TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13						chr10	TogoVar
TCTN3_chr10_95658401_95698927	95677473	A A	ACAGTTTT others(11): Show ACAGTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0048 a0001c0002t0001g0048	1	213	0.0047	18	c.159 others(37): Show c.1590+2998_1590+2999insAAAAAAAAAAAAAAACTG		TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	13/13						chr10	TogoVar
TDGF1_chr3_46572788_46587457	46573537	A A	AATATATA others(11): Show AATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG03490.hp1 others(1): Show HG01168.hp1 HG01169.hp2 HG03490.hp1 HG03492.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0003 a0003c0003t0005g0003	4	384	0.0104	18	c.-44 others(29): Show c.-4433_-4432insATATATATATATATATAT		TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding					4250		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573541	A A	AATATATA others(11): Show AATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp2 NA18985.hp1 HG03490.hp2 NA18985.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0002 a0002c0002t0003g0025 a0002c0002t0003g0002 a0002c0002t0003g0025	2	347	0.0058	18	c.-44 others(29): Show c.-4429_-4428insATATATATATATATATAT		TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding					4246		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573543	A A	AATATATA others(11): Show AATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0002 a0002c0002t0003g0002	1	331	0.0030	18	c.-44 others(29): Show c.-4427_-4426insATATATATATATATATAT		TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding					4244		chr3	TogoVar
TDP1_chr14_89950927_90049764	89998416	A A	ATATATAT others(11): Show ATATATATATATATGTATG	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02630.hp2 HG01891.hp1 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0013 a0001c0002t0001 a0001c0002t0013	a0001c0002t0001g0195 a0001c0002t0013g0199 a0001c0002t0001g0195 a0001c0002t0013g0199	2	211	0.0095	18	c.154 others(37): Show c.1541+4940_1541+4941insATATATGTATGTATATAT		TDP1	ENSG00000042088.14	transcript	ENST00000335725.9	protein_coding	14/16					INFO_REALIGN_3_PRIME	chr14	TogoVar
TDP2_chr6_24644979_24671899	24648659	G G	GAAAAAAA others(11): Show GAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG03225.hp1 HG02257.hp2 HG03225.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0013 a0002c0002t0001g0013	2	307	0.0065	18	c.21 others(29): Show c.2128_*2129insTTTTTTTTTTTTTTTTTT		TDP2	ENSG00000111802.14	transcript	ENST00000378198.9	protein_coding					1319		chr6	TogoVar
TDP2_chr6_24644979_24671899	24648678	A A	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG02055.hp1 HG01109.hp2 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0003t0008 a0001c0001t0003 a0001c0003t0008	a0001c0001t0003g0154 a0001c0003t0008g0024 a0001c0001t0003g0154 a0001c0003t0008g0024	2	120	0.0167	18	c.21 others(29): Show c.2109_*2110insGTTTTTTTTTTTTTTTTT		TDP2	ENSG00000111802.14	transcript	ENST00000378198.9	protein_coding					1300		chr6	TogoVar
TDRD10_chr1_154497219_154553147	154533506	T T	TTCTCTCC others(11): Show TTCTCTCCATCTTTCAGAG	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0198 a0002c0002t0002g0198	1	330	0.0030	18	c.370 others(35): Show c.370-8514_370-8497dupCTCCATCTTTCAGAGTCT		TDRD10	ENSG00000163239.12	transcript	ENST00000368482.8	protein_coding	6/12					INFO_REALIGN_3_PRIME	chr1	TogoVar
TDRD5_chr1_179586832_179696272	179692363	T T	TTATATAT others(11): Show TTATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01891.hp1 HG02027.hp1 others(4): Show HG00544.hp1 HG01891.hp1 HG02027.hp1 HG02723.hp1 NA18963.hp1 NA18977.hp1 NA19009.hp1	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0007	a0001c0001 a0004c0004 a0005c0006 others(1): Show a0001c0001 a0004c0004 a0005c0006 a0007c0010	a0001c0001t0001 a0004c0004t0001 a0005c0006t0001 others(2): Show a0001c0001t0001 a0004c0004t0001 a0005c0006t0001 a0005c0006t0002 a0007c0010t0001	a0001c0001t0001g0094 a0004c0004t0001g0037 a0004c0004t0001g0043 others(4): Show a0001c0001t0001g0094 a0004c0004t0001g0037 a0004c0004t0001g0043 a0005c0006t0001g0218 a0005c0006t0001g0263 a0005c0006t0002g0222 a0007c0010t0001g0258	7	13	0.5385	18	c.14 others(29): Show c.1420_*1421insTATATATATATATATATA		TDRD5	ENSG00000162782.16	transcript	ENST00000444136.6	protein_coding					1092		chr1	TogoVar
TDRD5_chr1_179586832_179696272	179692363	T T	TTATTTAT others(11): Show TTATTTATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0022 a0004c0004t0001g0022	1	7	0.1429	18	c.14 others(29): Show c.1420_*1421insTATTTATATATATATATA		TDRD5	ENSG00000162782.16	transcript	ENST00000444136.6	protein_coding					1092		chr1	TogoVar
TDRD9_chr14_103923456_104057667	103925043	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0118 a0001c0003t0004g0118	1	269	0.0037	18	c.-34 others(29): Show c.-3467_-3466insTTTTTTTTTTTTTTTTTT		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding					3412		chr14	TogoVar
TDRD9_chr14_103923456_104057667	103939743	G G	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG04228.hp1 HG02723.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0268 a0001c0001t0001g0171 a0001c0001t0001g0268	2	142	0.0141	18	c.215 others(37): Show c.215+11023_215+11040dupTTTTTTTTTTTTTTTTTT		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	1/35					INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103956103	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0277 a0001c0001t0001g0277	1	348	0.0029	18	c.322 others(33): Show c.322+334_322+335insTATATATATATATATATA		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35					INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103956109	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0361 a0001c0002t0002g0361	1	247	0.0040	18	c.322 others(33): Show c.322+340_322+341insTATATATATATATATATA		TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35					INFO_REALIGN_3_PRIME	chr14	TogoVar

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