regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TC2N_chr14_91774746_91872536 | 91801080 | G | GTA | intron_variant | MODIFIER | HG01081.hp2 HG01175.hp2 HG02630.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0013a0001c0001t0025others(3): Show | a0001c0001t0002g0260a0001c0001t0002g0297a0001c0001t0013g0020others(6): Show | 9 | 344 | 0.0262 | 2 | c.470 others(17): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 4/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91802744 | T | TGG | intron_variant | MODIFIER | HG02109.hp1 HG02451.hp2 HG02602.hp2 others(33): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0005a0001c0001t0006others(4): Show | a0001c0001t0004g0004a0001c0001t0004g0311a0001c0001t0004g0312others(28): Show | 36 | 344 | 0.1047 | 2 | c.302 others(17): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 3/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91803380 | T | TAC | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00597.hp2 others(61): Show |
a0001a0004a0005 | a0001c0001a0001c0002a0004c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0014others(58): Show | 64 | 344 | 0.1861 | 2 | c.302 others(17): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 3/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91803412 | T | TAC | intron_variant | MODIFIER | HG00738.hp1 HG01069.hp1 HG03486.hp1 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0001a0002c0003t0015 | a0001c0002t0001g0135a0001c0002t0001g0147a0002c0003t0015g0092 | 3 | 344 | 0.0087 | 2 | c.302 others(17): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 3/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91803428 | C | CAT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(264): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(253): Show | 267 | 344 | 0.7762 | 2 | c.302 others(19): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 3/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91823535 | A | AAG | intron_variant | MODIFIER | HG01109.hp1 HG01891.hp2 HG02280.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0026 | a0001c0001t0009g0130a0001c0001t0009g0153a0001c0001t0009g0154others(5): Show | 8 | 344 | 0.0233 | 2 | c.-56 others(19): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91826319 | G | GAA | intron_variant | MODIFIER | HG00673.hp2 HG01175.hp1 HG01496.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0030a0001c0001t0002g0209a0001c0001t0002g0220others(18): Show | 21 | 344 | 0.0611 | 2 | c.-56 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91832390 | C | CAA | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(275): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0014others(265): Show | 278 | 344 | 0.8081 | 2 | c.-56 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91838146 | C | CTT | intron_variant | MODIFIER | HG01109.hp1 HG01891.hp2 HG02280.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0005a0001c0001t0009others(1): Show | a0001c0001t0004g0322a0001c0001t0005g0149a0001c0001t0009g0130others(7): Show | 10 | 344 | 0.0291 | 2 | c.-56 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91841976 | C | CTT | intron_variant | MODIFIER | HG00544.hp1 HG00558.hp1 HG00558.hp2 others(85): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0006a0001c0001t0001g0039a0001c0001t0001g0044others(78): Show | 88 | 344 | 0.2558 | 2 | c.-57 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91844760 | C | CAA | intron_variant | MODIFIER | HG00642.hp1 HG01109.hp1 HG02145.hp1 others(14): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(5): Show | a0001c0001t0002g0201a0001c0001t0002g0202a0001c0001t0003g0170others(14): Show | 17 | 344 | 0.0494 | 2 | c.-57 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91847259 | G | GAA | intron_variant | MODIFIER | HG02630.hp2 HG02818.hp2 HG02895.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0013a0001c0001t0025others(1): Show | a0001c0001t0006g0054a0001c0001t0006g0060a0001c0001t0006g0061others(8): Show | 11 | 344 | 0.0320 | 2 | c.-57 others(21): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91858152 | C | CTT | intron_variant | MODIFIER | HG01109.hp1 HG01192.hp2 HG01884.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0008a0001c0001t0009others(4): Show | a0001c0001t0006g0159a0001c0001t0008g0078a0001c0001t0008g0079others(15): Show | 18 | 344 | 0.0523 | 2 | c.-57 others(19): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91861913 | A | AAT | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00423.hp1 others(266): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0014others(252): Show | 269 | 344 | 0.7820 | 2 | c.-57 others(19): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 1/11 | chr14 | TogoVar | ||||||
TC2N_chr14_91774746_91872536 | 91871221 | T | TAA | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(254): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0014others(246): Show | 257 | 344 | 0.7471 | 2 | c.-40 others(13): Show |
TC2N | ENSG00000165929.13 | transcript | ENST00000435962.7 | protein_coding | 3686 | chr14 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143860020 | T | TAA | intron_variant | MODIFIER | HG02135.hp2 NA18966.hp1 NA19086.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0009a0001c0001t0012a0001c0004t0001 | a0001c0001t0009g0140a0001c0001t0012g0024a0001c0004t0001g0224 | 3 | 256 | 0.0117 | 2 | c.216 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 6/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143867174 | T | TAA | intron_variant | MODIFIER | HG00544.hp1 HG00642.hp1 HG00733.hp2 others(49): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(20): Show | a0001c0001t0001g0182a0001c0001t0003g0128a0001c0001t0004g0130others(49): Show | 52 | 256 | 0.2031 | 2 | c.621 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 2/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143867718 | T | TCA | intron_variant | MODIFIER | HG00140.hp1 HG00544.hp1 HG00597.hp2 others(147): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(39): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0007others(139): Show | 150 | 256 | 0.5859 | 2 | c.621 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 2/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143882193 | A | AAC | intron_variant | MODIFIER | HG00738.hp1 HG00738.hp2 HG01168.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0022a0001c0001t0038others(1): Show | a0001c0001t0001g0173a0001c0001t0001g0203a0001c0001t0001g0214others(12): Show | 16 | 256 | 0.0625 | 2 | c.-14 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143883500 | C | CTT | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(47): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(25): Show | a0001c0001t0001g0214a0001c0001t0001g0220a0001c0001t0003g0061others(47): Show | 50 | 256 | 0.1953 | 2 | c.-14 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143886700 | C | CTT | intron_variant | MODIFIER | HG00544.hp1 HG00733.hp1 HG01175.hp2 others(48): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(19): Show | a0001c0001t0001g0175a0001c0001t0001g0239a0001c0001t0003g0064others(47): Show | 51 | 256 | 0.1992 | 2 | c.-14 others(21): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143897131 | A | AAT | intron_variant | MODIFIER | HG00639.hp1 HG00738.hp2 HG01257.hp1 others(7): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0002 | a0001c0001t0001g0006a0001c0001t0001g0212a0001c0001t0001g0213others(6): Show | 10 | 256 | 0.0391 | 2 | c.-15 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143900060 | A | AAC | intron_variant | MODIFIER | HG00140.hp2 HG00423.hp1 HG00423.hp2 others(120): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0008others(40): Show | a0001c0001t0003g0004a0001c0001t0003g0056a0001c0001t0003g0061others(117): Show | 123 | 256 | 0.4805 | 2 | c.-15 others(19): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
TCAF1_chr7_143846375_143907176 | 143904990 | C | CTG | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00741.hp2 others(38): Show |
a0001a0002a0005others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(19): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0173others(38): Show | 41 | 256 | 0.1602 | 2 | c.-30 others(13): Show |
TCAF1 | ENSG00000198420.10 | transcript | ENST00000479870.6 | protein_coding | 2815 | chr7 | TogoVar | ||||||
TCAIM_chr3_44333766_44414448 | 44339107 | C | CAA | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00423.hp1 others(194): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0001a0001c0001t0001g0012a0001c0001t0001g0027others(193): Show | 197 | 248 | 0.7944 | 2 | c.-45 others(17): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 1/10 | chr3 | TogoVar | ||||||
TCAIM_chr3_44333766_44414448 | 44344023 | C | CTT | intron_variant | MODIFIER | HG01192.hp2 HG02055.hp2 HG03486.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(2): Show | a0001c0001t0002g0082a0001c0001t0003g0083a0001c0001t0008g0080others(2): Show | 5 | 248 | 0.0202 | 2 | c.-45 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44352087 | G | GTA | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02559.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0015 | a0001c0001t0005g0003a0001c0001t0005g0004a0001c0001t0005g0005others(4): Show | 7 | 248 | 0.0282 | 2 | c.-44 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44363920 | C | CTT | intron_variant | MODIFIER | HG02622.hp1 HG02717.hp1 HG02886.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0004a0002c0002t0001 | a0001c0001t0001g0141a0001c0001t0001g0142a0001c0001t0001g0143others(3): Show | 6 | 248 | 0.0242 | 2 | c.319 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44370455 | C | CAA | intron_variant | MODIFIER | HG00597.hp2 HG01175.hp2 HG02280.hp1 others(4): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0006 | a0001c0001t0001g0160a0001c0001t0001g0161a0001c0001t0001g0162others(4): Show | 7 | 248 | 0.0282 | 2 | c.572 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44370908 | A | ATT | intron_variant | MODIFIER | HG00735.hp2 HG01106.hp2 HG03486.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0015 | a0001c0001t0001g0095a0001c0001t0001g0125a0001c0001t0001g0126others(3): Show | 6 | 248 | 0.0242 | 2 | c.572 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44378796 | C | CAA | intron_variant | MODIFIER | HG01358.hp1 HG01975.hp1 NA18961.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0148a0001c0001t0001g0149others(1): Show | 5 | 248 | 0.0202 | 2 | c.572 others(21): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCAIM_chr3_44333766_44414448 | 44386209 | C | CAA | intron_variant | MODIFIER | HG00558.hp1 HG00597.hp2 HG00609.hp1 others(36): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0098a0001c0001t0001g0108a0001c0001t0001g0140others(36): Show | 39 | 248 | 0.1573 | 2 | c.573 others(19): Show |
TCAIM | ENSG00000179152.20 | transcript | ENST00000342649.9 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TCEA1_chr8_53961556_54027448 | 53962460 | C | CAA | downstream_gene_variant | MODIFIER | HG00735.hp2 HG01070.hp1 HG01071.hp1 others(39): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005 | a0001c0001t0003g0009a0001c0001t0003g0010a0001c0001t0003g0023others(33): Show | 42 | 314 | 0.1338 | 2 | c.*56 others(13): Show |
TCEA1 | ENSG00000187735.16 | transcript | ENST00000521604.7 | protein_coding | 4095 | chr8 | TogoVar | ||||||
TCEA1_chr8_53961556_54027448 | 53964267 | C | CTT | downstream_gene_variant | MODIFIER | HG00735.hp2 HG01070.hp1 HG01071.hp1 others(39): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005 | a0001c0001t0003g0009a0001c0001t0003g0010a0001c0001t0003g0023others(33): Show | 42 | 314 | 0.1338 | 2 | c.*38 others(13): Show |
TCEA1 | ENSG00000187735.16 | transcript | ENST00000521604.7 | protein_coding | 2288 | chr8 | TogoVar | ||||||
TCEA1_chr8_53961556_54027448 | 53992955 | C | CTT | intron_variant | MODIFIER | HG00735.hp2 HG01070.hp1 HG01071.hp1 others(60): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005 | a0001c0001t0003g0005a0001c0001t0003g0006a0001c0001t0003g0007others(48): Show | 63 | 314 | 0.2006 | 2 | c.320 others(17): Show |
TCEA1 | ENSG00000187735.16 | transcript | ENST00000521604.7 | protein_coding | 4/9 | chr8 | TogoVar | ||||||
TCEA1_chr8_53961556_54027448 | 54000758 | A | ATT | intron_variant | MODIFIER | HG01109.hp1 HG01168.hp1 HG01169.hp1 others(48): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0003g0005a0001c0001t0003g0006a0001c0001t0003g0007others(40): Show | 51 | 314 | 0.1624 | 2 | c.127 others(17): Show |
TCEA1 | ENSG00000187735.16 | transcript | ENST00000521604.7 | protein_coding | 2/9 | chr8 | TogoVar | ||||||
TCEA1_chr8_53961556_54027448 | 54023800 | A | ATT | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01071.hp1 HG01167.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0009a0001c0001t0003g0010a0001c0001t0003g0263others(5): Show | 12 | 314 | 0.0382 | 2 | c.-16 others(13): Show |
TCEA1 | ENSG00000187735.16 | transcript | ENST00000521604.7 | protein_coding | 1353 | chr8 | TogoVar | ||||||
TCEA2_chr20_64058198_64077347 | 64061096 | C | CTT | upstream_gene_variant | MODIFIER | HG01106.hp2 HG01168.hp1 HG01169.hp1 others(29): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005others(6): Show | 32 | 384 | 0.0833 | 2 | c.-22 others(13): Show |
TCEA2 | ENSG00000171703.17 | transcript | ENST00000343484.10 | protein_coding | 2101 | chr20 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23376649 | G | GTT | downstream_gene_variant | MODIFIER | HG00544.hp2 HG01099.hp2 HG01106.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0007 | a0001c0001t0001g0008a0001c0001t0001g0149a0001c0001t0001g0155others(19): Show | 22 | 378 | 0.0582 | 2 | c.*48 others(13): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 4259 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23376818 | A | ATT | downstream_gene_variant | MODIFIER | HG00544.hp2 HG00738.hp1 HG00741.hp1 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0020a0001c0001t0001g0061a0001c0001t0001g0078others(25): Show | 31 | 378 | 0.0820 | 2 | c.*46 others(13): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 4090 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23384662 | C | CTT | intron_variant | MODIFIER | HG02451.hp2 HG02486.hp2 HG02572.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0029a0001c0001t0002g0165a0001c0001t0002g0170others(11): Show | 15 | 378 | 0.0397 | 2 | c.967 others(17): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 9/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23388199 | C | CTT | intron_variant | MODIFIER | HG00642.hp1 HG02135.hp1 HG02559.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0157a0001c0001t0002g0184a0001c0001t0002g0253others(5): Show | 8 | 378 | 0.0212 | 2 | c.820 others(17): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 8/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23389487 | C | CAA | intron_variant | MODIFIER | HG01109.hp2 HG01515.hp1 HG02040.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0089a0001c0001t0001g0094a0001c0001t0001g0115others(14): Show | 18 | 378 | 0.0476 | 2 | c.820 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 8/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23392475 | C | CCA | intron_variant | MODIFIER | HG01243.hp1 HG02615.hp2 HG02809.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0237a0001c0001t0003g0188a0001c0001t0003g0189others(2): Show | 5 | 378 | 0.0132 | 2 | c.819 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 8/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23399136 | G | GTA | intron_variant | MODIFIER | HG01109.hp2 HG01891.hp1 HG02451.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005 | a0001c0001t0002g0289a0001c0001t0002g0316a0001c0001t0003g0350others(3): Show | 6 | 378 | 0.0159 | 2 | c.444 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 5/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23399144 | G | GTA | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00544.hp2 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0024a0001c0001t0001g0038a0001c0001t0001g0050others(25): Show | 28 | 378 | 0.0741 | 2 | c.444 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 5/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23400373 | C | CTT | intron_variant | MODIFIER | NA19043.hp1 NA19056.hp2 NA19066.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0009a0001c0001t0001g0076a0001c0001t0001g0077others(2): Show | 6 | 378 | 0.0159 | 2 | c.444 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 5/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23413986 | G | GTA | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(159): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(150): Show | 162 | 378 | 0.4286 | 2 | c.380 others(19): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 4/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23417493 | G | GCA | intron_variant | MODIFIER | HG02257.hp2 HG02486.hp1 HG02965.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0353a0001c0001t0003g0354a0001c0001t0003g0355others(2): Show | 5 | 378 | 0.0132 | 2 | c.239 others(17): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 3/10 | chr1 | TogoVar | ||||||
TCEA3_chr1_23375909_23429748 | 23425176 | C | CGT | upstream_gene_variant | MODIFIER | HG00597.hp1 HG00642.hp1 HG01123.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0074a0001c0001t0001g0139a0001c0001t0002g0175others(21): Show | 24 | 378 | 0.0635 | 2 | c.-54 others(11): Show |
TCEA3 | ENSG00000204219.11 | transcript | ENST00000450454.7 | protein_coding | 429 | chr1 | TogoVar |