regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TCP11X1_chrX_102210301_102231795 | 102220693 | A | ATT | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG02129.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0013 | 5 | 37 | 0.1351 | 2 | c.231 others(17): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TCP11X1_chrX_102210301_102231795 | 102220695 | A | ATT | intron_variant | MODIFIER | HG02293.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0007 | 1 | 37 | 0.0270 | 2 | c.231 others(17): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TCP11X1_chrX_102210301_102231795 | 102224352 | T | TCA | intron_variant | MODIFIER | NA19004.hp1 | a0005 | a0005c0006 | a0005c0006t0003 | a0005c0006t0003g0018 | 1 | 37 | 0.0270 | 2 | c.111 others(17): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TCP11X1_chrX_102210301_102231795 | 102224556 | G | GTA | intron_variant | MODIFIER | HG03017.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0020 | 1 | 37 | 0.0270 | 2 | c.111 others(19): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TCP11X2_chrX_102455315_102476812 | 102456856 | C | CCA | downstream_gene_variant | MODIFIER | HG01981.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | 1 | 137 | 0.0073 | 2 | c.*36 others(13): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 3458 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102460899 | T | TTG | intron_variant | MODIFIER | NA19001.hp2 | a0009 | a0009c0008 | a0009c0008t0004 | a0009c0008t0004g0045 | 1 | 137 | 0.0073 | 2 | c.127 others(19): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 9/9 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102466394 | C | CAA | intron_variant | MODIFIER | HG02970.hp1 | a0005 | a0005c0010 | a0005c0010t0001 | a0005c0010t0001g0054 | 1 | 137 | 0.0073 | 2 | c.231 others(17): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 3/9 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102466418 | A | AAT | intron_variant | MODIFIER | HG02896.hp2 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 2 | 137 | 0.0146 | 2 | c.231 others(17): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 3/9 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102466422 | A | AAT | intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 | 1 | 137 | 0.0073 | 2 | c.231 others(17): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 3/9 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102475145 | G | GAA | upstream_gene_variant | MODIFIER | HG00544.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0023 | 1 | 137 | 0.0073 | 2 | c.-33 others(13): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 3334 | chrX | TogoVar | ||||||
TCP11X2_chrX_102455315_102476812 | 102476274 | T | TCC | upstream_gene_variant | MODIFIER | NA18968.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0001 | 1 | 137 | 0.0073 | 2 | c.-45 others(13): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 4463 | chrX | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35123651 | C | CTT | intron_variant | MODIFIER | HG00738.hp2 HG00741.hp2 HG01123.hp1 others(33): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006 | a0001c0001t0001g0021a0001c0001t0001g0024a0001c0001t0001g0163others(12): Show | 36 | 412 | 0.0874 | 2 | c.358 others(19): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 4/9 | chr6 | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35126650 | C | CTT | intron_variant | MODIFIER | HG00597.hp1 HG00741.hp1 HG01109.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0007 | a0001c0001t0002g0011a0001c0001t0002g0015a0001c0001t0002g0116others(6): Show | 17 | 412 | 0.0413 | 2 | c.357 others(19): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 4/9 | chr6 | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35135620 | T | TAA | intron_variant | MODIFIER | HG00558.hp1 HG00609.hp1 HG00673.hp1 others(61): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0002c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0153a0001c0001t0001g0156a0001c0001t0001g0193others(37): Show | 64 | 412 | 0.1553 | 2 | c.236 others(17): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 3/9 | chr6 | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35144160 | T | TAA | upstream_gene_variant | MODIFIER | HG02080.hp1 HG02647.hp2 HG02717.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0156a0001c0001t0002g0015a0001c0001t0002g0032others(1): Show | 8 | 412 | 0.0194 | 2 | c.-29 others(13): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 2822 | chr6 | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35144173 | A | AAG | upstream_gene_variant | MODIFIER | HG00558.hp1 HG00673.hp1 HG00733.hp2 others(47): Show |
a0002a0005 | a0002c0002a0005c0006 | a0002c0002t0004a0005c0006t0004 | a0002c0002t0004g0005a0002c0002t0004g0006a0002c0002t0004g0025others(25): Show | 50 | 412 | 0.1214 | 2 | c.-29 others(13): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 2835 | chr6 | TogoVar | ||||||
TCP11_chr6_35113075_35146339 | 35144553 | A | ATT | upstream_gene_variant | MODIFIER | HG02132.hp2 HG02165.hp2 HG03669.hp1 others(4): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0002 | a0001c0001t0001g0018a0001c0001t0001g0154a0004c0004t0002g0112others(1): Show | 7 | 412 | 0.0170 | 2 | c.-33 others(13): Show |
TCP11 | ENSG00000124678.20 | transcript | ENST00000311875.11 | protein_coding | 3215 | chr6 | TogoVar | ||||||
TCP1_chr6_159773498_159794602 | 159778423 | T | TAA | downstream_gene_variant | MODIFIER | HG00323.hp2 HG01169.hp2 HG01243.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0016a0001c0001t0002g0022a0001c0001t0002g0031others(3): Show | 7 | 404 | 0.0173 | 2 | c.*62 others(11): Show |
TCP1 | ENSG00000120438.12 | transcript | ENST00000321394.12 | protein_coding | 74 | chr6 | TogoVar | ||||||
TCP1_chr6_159773498_159794602 | 159781987 | T | TAA | intron_variant | MODIFIER | HG01109.hp1 HG02055.hp1 HG02886.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017a0001c0001t0001g0029 | 5 | 404 | 0.0124 | 2 | c.798 others(17): Show |
TCP1 | ENSG00000120438.12 | transcript | ENST00000321394.12 | protein_coding | 7/11 | chr6 | TogoVar | ||||||
TCP1_chr6_159773498_159794602 | 159783379 | A | ATT | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(160): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0009others(39): Show | 163 | 404 | 0.4035 | 2 | c.797 others(17): Show |
TCP1 | ENSG00000120438.12 | transcript | ENST00000321394.12 | protein_coding | 7/11 | chr6 | TogoVar | ||||||
TCTE1_chr6_44273734_44302698 | 44278870 | T | TAC | 3_prime_UTR_variant | MODIFIER | HG00597.hp2 HG01943.hp2 HG01952.hp1 others(8): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0018a0001c0001t0057a0001c0001t0059others(3): Show | a0001c0001t0018g0036a0001c0001t0018g0180a0001c0001t0018g0184others(7): Show | 11 | 364 | 0.0302 | 2 | c.*13 others(13): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 5/5 | 1310 | chr6 | TogoVar | |||||
TCTE1_chr6_44273734_44302698 | 44279748 | G | GGT | 3_prime_UTR_variant | MODIFIER | HG00558.hp2 HG00673.hp2 HG00738.hp1 others(35): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0002c0010others(5): Show | a0001c0001t0021a0001c0001t0048a0002c0002t0003others(7): Show | a0001c0001t0021g0131a0001c0001t0021g0135a0001c0001t0048g0183others(31): Show | 38 | 364 | 0.1044 | 2 | c.*43 others(11): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 5/5 | 432 | chr6 | TogoVar | |||||
TCTE1_chr6_44273734_44302698 | 44282799 | C | CTT | intron_variant | MODIFIER | HG01192.hp1 HG01358.hp2 HG01981.hp1 others(8): Show |
a0001a0005 | a0001c0001a0001c0015a0005c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(3): Show | a0001c0001t0001g0121a0001c0001t0001g0140a0001c0001t0002g0098others(7): Show | 11 | 364 | 0.0302 | 2 | c.847 others(17): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 3/4 | chr6 | TogoVar | ||||||
TCTE1_chr6_44273734_44302698 | 44288993 | C | CAA | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00558.hp2 others(110): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0018a0002c0002others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(28): Show | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0082others(80): Show | 113 | 364 | 0.3104 | 2 | c.-93 others(19): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 1/4 | chr6 | TogoVar | ||||||
TCTE1_chr6_44273734_44302698 | 44289022 | A | AAG | intron_variant | MODIFIER | HG00280.hp2 HG00544.hp1 HG00597.hp1 others(14): Show |
a0003 | a0003c0003 | a0003c0003t0001a0003c0003t0002a0003c0003t0009others(4): Show | a0003c0003t0001g0005a0003c0003t0001g0255a0003c0003t0001g0265others(10): Show | 17 | 364 | 0.0467 | 2 | c.-93 others(19): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 1/4 | chr6 | TogoVar | ||||||
TCTE1_chr6_44273734_44302698 | 44294772 | C | CAA | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00544.hp2 others(96): Show |
a0001a0002a0004others(2): Show | a0001c0001a0002c0002a0002c0006others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(31): Show | a0001c0001t0001g0032a0001c0001t0001g0136a0001c0001t0001g0140others(78): Show | 99 | 364 | 0.2720 | 2 | c.-94 others(19): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 1/4 | chr6 | TogoVar | ||||||
TCTE1_chr6_44273734_44302698 | 44298911 | C | CTT | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(327): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0015a0001c0018others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(81): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0006others(243): Show | 330 | 364 | 0.9066 | 2 | c.-13 others(13): Show |
TCTE1 | ENSG00000146221.10 | transcript | ENST00000371505.5 | protein_coding | 1214 | chr6 | TogoVar | ||||||
TCTN1_chr12_110609129_110654430 | 110610115 | C | CAA | upstream_gene_variant | MODIFIER | HG01167.hp1 HG01175.hp1 HG01175.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0034others(5): Show | 13 | 284 | 0.0458 | 2 | c.-40 others(13): Show |
TCTN1 | ENSG00000204852.17 | transcript | ENST00000397659.9 | protein_coding | 4013 | chr12 | TogoVar | ||||||
TCTN1_chr12_110609129_110654430 | 110613443 | C | CAA | upstream_gene_variant | MODIFIER | HG00738.hp2 HG01069.hp1 HG01106.hp1 others(10): Show |
a0001a0002a0004 | a0001c0001a0002c0003a0004c0005 | a0001c0001t0001a0002c0003t0001a0004c0005t0001 | a0001c0001t0001g0002a0001c0001t0001g0008a0001c0001t0001g0014others(9): Show | 13 | 284 | 0.0458 | 2 | c.-74 others(11): Show |
TCTN1 | ENSG00000204852.17 | transcript | ENST00000397659.9 | protein_coding | 685 | chr12 | TogoVar | ||||||
TCTN1_chr12_110609129_110654430 | 110613712 | C | CTT | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00621.hp1 HG02055.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0033a0001c0001t0001g0093others(12): Show | 15 | 284 | 0.0528 | 2 | c.-47 others(11): Show |
TCTN1 | ENSG00000204852.17 | transcript | ENST00000397659.9 | protein_coding | 416 | chr12 | TogoVar | ||||||
TCTN1_chr12_110609129_110654430 | 110639438 | C | CTG | intron_variant | MODIFIER | HG00735.hp1 HG01069.hp2 HG01071.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0028a0001c0001t0001g0030a0001c0001t0001g0119others(4): Show | 9 | 284 | 0.0317 | 2 | c.844 others(17): Show |
TCTN1 | ENSG00000204852.17 | transcript | ENST00000397659.9 | protein_coding | 7/14 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN1_chr12_110609129_110654430 | 110652380 | A | ACT | downstream_gene_variant | MODIFIER | HG00738.hp2 HG01069.hp1 NA20805.hp1 |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0004c0005t0001 | a0001c0001t0001g0046a0004c0005t0001g0018 | 3 | 284 | 0.0106 | 2 | c.*33 others(13): Show |
TCTN1 | ENSG00000204852.17 | transcript | ENST00000397659.9 | protein_coding | 2951 | chr12 | TogoVar | ||||||
TCTN2_chr12_123666113_123713399 | 123669983 | C | CTG | upstream_gene_variant | MODIFIER | HG02976.hp1 HG03486.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0019 | a0001c0001t0002g0023a0001c0001t0019g0159 | 2 | 236 | 0.0085 | 2 | c.-12 others(13): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 1129 | chr12 | TogoVar | ||||||
TCTN2_chr12_123666113_123713399 | 123676566 | T | TAA | intron_variant | MODIFIER | HG00140.hp1 HG00621.hp1 HG00735.hp2 others(26): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(7): Show | a0001c0001t0002g0006a0001c0001t0002g0137a0001c0001t0002g0138others(26): Show | 29 | 236 | 0.1229 | 2 | c.464 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN2_chr12_123666113_123713399 | 123680352 | C | CAA | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(46): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0002a0001c0001t0007a0001c0001t0010others(4): Show | a0001c0001t0002g0002a0001c0001t0002g0006a0001c0001t0002g0007others(35): Show | 49 | 236 | 0.2076 | 2 | c.564 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 5/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN2_chr12_123666113_123713399 | 123691738 | G | GTT | intron_variant | MODIFIER | HG01934.hp2 HG04228.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0151a0001c0001t0002g0158 | 2 | 236 | 0.0085 | 2 | c.103 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 8/17 | chr12 | TogoVar | ||||||
TCTN2_chr12_123666113_123713399 | 123693454 | A | ATT | intron_variant | MODIFIER | HG02257.hp2 HG02258.hp1 HG02895.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0010a0001c0001t0008g0028a0001c0001t0008g0029others(2): Show | 6 | 236 | 0.0254 | 2 | c.109 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 9/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN2_chr12_123666113_123713399 | 123696174 | A | ATT | intron_variant | MODIFIER | HG02257.hp2 HG02258.hp1 HG02895.hp1 others(4): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0008a0001c0004t0005 | a0001c0001t0008g0010a0001c0001t0008g0028a0001c0001t0008g0029others(3): Show | 7 | 236 | 0.0297 | 2 | c.131 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 11/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN2_chr12_123666113_123713399 | 123705161 | G | GTT | intron_variant | MODIFIER | HG00733.hp1 HG01175.hp2 HG01358.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0010others(1): Show | a0001c0001t0002g0137a0001c0001t0002g0141a0001c0001t0002g0153others(12): Show | 15 | 236 | 0.0636 | 2 | c.176 others(19): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 15/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TCTN2_chr12_123666113_123713399 | 123709331 | A | ATT | downstream_gene_variant | MODIFIER | HG00140.hp1 HG01175.hp2 HG01243.hp1 others(13): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0002g0140a0001c0001t0002g0146a0001c0001t0002g0152others(13): Show | 16 | 236 | 0.0678 | 2 | c.*16 others(13): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 933 | chr12 | TogoVar | ||||||
TCTN2_chr12_123666113_123713399 | 123709510 | A | ATT | downstream_gene_variant | MODIFIER | HG01109.hp2 HG02818.hp2 NA18522.hp2 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0004a0001c0001t0006a0001c0004t0005 | a0001c0001t0004g0117a0001c0001t0004g0119a0001c0001t0006g0116others(2): Show | 5 | 236 | 0.0212 | 2 | c.*17 others(13): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 1112 | chr12 | TogoVar | ||||||
TCTN2_chr12_123666113_123713399 | 123712061 | T | TCA | downstream_gene_variant | MODIFIER | HG01192.hp1 HG01257.hp1 HG01981.hp1 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0023 | a0001c0002t0001g0034a0001c0002t0001g0078a0001c0002t0023g0096 | 3 | 236 | 0.0127 | 2 | c.*43 others(13): Show |
TCTN2 | ENSG00000168778.13 | transcript | ENST00000303372.7 | protein_coding | 3663 | chr12 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95666240 | C | CTT | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00423.hp1 others(79): Show |
a0001a0002a0007 | a0001c0001a0002c0004a0007c0008 | a0001c0001t0001a0001c0001t0006a0002c0004t0001others(1): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0006others(43): Show | 82 | 400 | 0.2050 | 2 | c.159 others(21): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 13/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95668255 | C | CAA | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00408.hp2 others(91): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0001a0001c0002t0002a0001c0007t0002others(1): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0009others(74): Show | 94 | 400 | 0.2350 | 2 | c.159 others(21): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 13/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95672685 | C | CTT | intron_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG00741.hp1 others(14): Show |
a0001a0006 | a0001c0002a0006c0009 | a0001c0002t0001a0006c0009t0001 | a0001c0002t0001g0018a0001c0002t0001g0054a0001c0002t0001g0055others(13): Show | 17 | 400 | 0.0425 | 2 | c.159 others(21): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 13/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95677470 | T | TAC | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00423.hp2 others(63): Show |
a0001a0005 | a0001c0001a0001c0002a0005c0010 | a0001c0001t0001a0001c0002t0002a0005c0010t0001 | a0001c0001t0001g0002a0001c0001t0001g0009a0001c0001t0001g0030others(51): Show | 66 | 400 | 0.1650 | 2 | c.159 others(21): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 13/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95679583 | C | CTT | intron_variant | MODIFIER | HG02630.hp2 HG02970.hp1 HG02976.hp2 others(3): Show |
a0001a0005 | a0001c0001a0005c0010 | a0001c0001t0003a0005c0010t0001 | a0001c0001t0003g0022a0001c0001t0003g0120a0001c0001t0003g0121others(2): Show | 6 | 400 | 0.0150 | 2 | c.159 others(19): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 13/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95680778 | C | CTT | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00423.hp1 others(82): Show |
a0001a0002a0007 | a0001c0001a0002c0004a0007c0008 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0006others(47): Show | 85 | 400 | 0.2125 | 2 | c.145 others(19): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 12/13 | chr10 | TogoVar | ||||||
TCTN3_chr10_95658401_95698927 | 95694895 | A | ATT | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00738.hp1 HG01081.hp1 others(28): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0001others(3): Show | a0001c0001t0001g0008a0001c0001t0001g0024a0001c0001t0001g0126others(25): Show | 31 | 400 | 0.0775 | 2 | c.-99 others(11): Show |
TCTN3 | ENSG00000119977.22 | transcript | ENST00000371217.10 | protein_coding | 969 | chr10 | TogoVar | ||||||
TDGF1P3_chrX_110515896_110528021 | 110519627 | C | CTT | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(43): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0007a0002c0002t0005 | a0001c0001t0002g0000a0001c0001t0007g0000a0002c0002t0005g0000 | 46 | 265 | 0.1736 | 2 | c.-15 others(13): Show |
TDGF1P3 | ENSG00000225366.6 | transcript | ENST00000602699.2 | protein_coding | 1268 | chrX | TogoVar |