regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TEX49_chr12_48722435_48770790 | 48727008 | T | TAA | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00639.hp2 others(35): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0003a0001c0001t0001g0006a0001c0001t0001g0007others(35): Show | 38 | 322 | 0.1180 | 2 | c.-47 others(11): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 426 | chr12 | TogoVar | ||||||
TEX49_chr12_48722435_48770790 | 48733072 | C | CTT | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp1 HG00544.hp2 others(74): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0018others(73): Show | 77 | 322 | 0.2391 | 2 | c.79+ others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48733764 | C | CTT | intron_variant | MODIFIER | HG00621.hp1 HG00621.hp2 HG01069.hp1 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0068a0001c0001t0001g0074a0001c0001t0001g0113others(25): Show | 28 | 322 | 0.0870 | 2 | c.79+ others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48735003 | C | CAA | intron_variant | MODIFIER | HG00323.hp2 HG00558.hp1 HG00558.hp2 others(37): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0003t0001a0002c0002t0001 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0012others(37): Show | 40 | 322 | 0.1242 | 2 | c.79+ others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48742277 | C | CTT | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00423.hp1 others(118): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(115): Show | 121 | 322 | 0.3758 | 2 | c.79+ others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TEX49_chr12_48722435_48770790 | 48742285 | T | TTC | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp2 HG01069.hp1 others(4): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0187a0001c0001t0001g0212a0001c0001t0001g0215others(4): Show | 7 | 322 | 0.0217 | 2 | c.79+ others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48743933 | C | CAA | intron_variant | MODIFIER | HG00280.hp1 HG01167.hp1 HG01175.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0040a0001c0001t0001g0046others(9): Show | 12 | 322 | 0.0373 | 2 | c.80- others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48752066 | C | CAA | intron_variant | MODIFIER | HG01106.hp1 HG01175.hp1 HG01257.hp1 others(4): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0047a0001c0001t0001g0059a0001c0001t0001g0169others(4): Show | 7 | 322 | 0.0217 | 2 | c.80- others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48756771 | C | CTT | intron_variant | MODIFIER | HG02109.hp2 HG02258.hp2 HG02486.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0125a0001c0001t0001g0146a0001c0001t0001g0147others(4): Show | 7 | 322 | 0.0217 | 2 | c.80- others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48756773 | T | TTC | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00639.hp2 others(36): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0007others(35): Show | 39 | 322 | 0.1211 | 2 | c.80- others(17): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48761719 | C | CTT | intron_variant | MODIFIER | HG01192.hp1 HG01243.hp2 HG02109.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0051a0001c0001t0001g0055a0001c0001t0001g0068others(6): Show | 9 | 322 | 0.0280 | 2 | c.202 others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48762047 | C | CTT | intron_variant | MODIFIER | HG00621.hp2 HG00735.hp1 HG01167.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0023a0001c0001t0001g0035a0001c0001t0001g0097others(10): Show | 13 | 322 | 0.0404 | 2 | c.202 others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX49_chr12_48722435_48770790 | 48762356 | C | CTT | intron_variant | MODIFIER | HG00558.hp2 HG00735.hp2 HG01167.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016a0001c0001t0001g0023a0001c0001t0001g0025others(15): Show | 18 | 322 | 0.0559 | 2 | c.203 others(19): Show |
TEX49 | ENSG00000257987.6 | transcript | ENST00000548380.6 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TEX50_chr1_173630338_173642130 | 173638095 | A | AGT | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00609.hp1 HG01069.hp2 others(94): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0001a0001c0001t0002g0001a0001c0001t0002g0005others(5): Show | 97 | 404 | 0.2401 | 2 | c.*10 others(13): Show |
TEX50 | ENSG00000232113.3 | transcript | ENST00000417563.3 | protein_coding | 966 | chr1 | TogoVar | ||||||
TEX52_chr12_2844046_2862039 | 2848877 | G | GCA | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00423.hp1 others(135): Show |
a0001a0003a0004 | a0001c0001a0001c0011a0001c0014others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0011t0001others(3): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(56): Show | 138 | 434 | 0.3180 | 2 | c.*35 others(11): Show |
TEX52 | ENSG00000283297.2 | transcript | ENST00000637658.2 | protein_coding | 168 | chr12 | TogoVar | ||||||
TEX52_chr12_2844046_2862039 | 2850475 | C | CAA | intron_variant | MODIFIER | HG01109.hp2 HG01123.hp2 HG02055.hp2 others(25): Show |
a0001a0007a0010 | a0001c0001a0007c0012a0010c0008 | a0001c0001t0001a0001c0001t0002a0007c0012t0001others(1): Show | a0001c0001t0001g0007a0001c0001t0001g0039a0001c0001t0001g0046others(14): Show | 28 | 434 | 0.0645 | 2 | c.624 others(17): Show |
TEX52 | ENSG00000283297.2 | transcript | ENST00000637658.2 | protein_coding | 2/2 | chr12 | TogoVar | ||||||
TEX52_chr12_2844046_2862039 | 2861167 | C | CAA | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01167.hp2 HG01891.hp1 others(17): Show |
a0001a0010 | a0001c0001a0001c0006a0010c0008 | a0001c0001t0001a0001c0006t0001a0010c0008t0001 | a0001c0001t0001g0016a0001c0001t0001g0039a0001c0001t0001g0046others(15): Show | 20 | 434 | 0.0461 | 2 | c.-41 others(13): Show |
TEX52 | ENSG00000283297.2 | transcript | ENST00000637658.2 | protein_coding | 4129 | chr12 | TogoVar | ||||||
TEX53_chr9_114651304_114662805 | 114651546 | A | ATG | downstream_gene_variant | MODIFIER | HG00642.hp1 HG00741.hp2 HG01106.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 | 13 | 400 | 0.0325 | 2 | c.*49 others(13): Show |
TEX53 | ENSG00000230054.3 | transcript | ENST00000423632.3 | protein_coding | 4757 | chr9 | TogoVar | ||||||
TEX53_chr9_114651304_114662805 | 114651633 | A | ATT | downstream_gene_variant | MODIFIER | HG01884.hp1 HG01891.hp1 HG01891.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0003g0005others(1): Show | 20 | 400 | 0.0500 | 2 | c.*48 others(13): Show |
TEX53 | ENSG00000230054.3 | transcript | ENST00000423632.3 | protein_coding | 4670 | chr9 | TogoVar | ||||||
TEX55_chr3_119141165_119156456 | 119142274 | C | CAA | upstream_gene_variant | MODIFIER | HG00639.hp1 HG02055.hp2 HG02257.hp1 others(10): Show |
a0001a0014 | a0001c0005a0014c0015 | a0001c0005t0001a0014c0015t0001 | a0001c0005t0001g0001a0001c0005t0001g0026a0014c0015t0001g0001 | 13 | 468 | 0.0278 | 2 | c.-39 others(13): Show |
TEX55 | ENSG00000163424.9 | transcript | ENST00000295622.6 | protein_coding | 3890 | chr3 | TogoVar | ||||||
TEX9_chr15_56360426_56435154 | 56396568 | G | GTT | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00438.hp2 others(69): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0009a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0192a0001c0001t0001g0308a0001c0001t0002g0253others(55): Show | 72 | 380 | 0.1895 | 2 | c.828 others(19): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56401308 | C | CAA | intron_variant | MODIFIER | HG01192.hp2 HG01261.hp2 HG01346.hp2 others(18): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0107a0001c0001t0001g0112a0001c0001t0001g0113others(16): Show | 21 | 380 | 0.0553 | 2 | c.828 others(19): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56407083 | T | TTG | intron_variant | MODIFIER | HG02602.hp2 NA18971.hp2 NA18980.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0024 | a0001c0001t0001g0019a0001c0001t0001g0139a0001c0001t0001g0143others(3): Show | 6 | 380 | 0.0158 | 2 | c.829 others(19): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56411389 | G | GGT | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp1 HG00558.hp2 others(79): Show |
a0000a0001 | a0000c0008a0001c0001 | a0000c0008t0014a0001c0001t0001a0001c0001t0024others(1): Show | a0000c0008t0014g0146a0001c0001t0001g0003a0001c0001t0001g0019others(71): Show | 82 | 380 | 0.2158 | 2 | c.829 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56412173 | C | CGT | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(74): Show |
a0001a0003a0006 | a0001c0001a0003c0004a0006c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0014a0001c0001t0001g0048a0001c0001t0001g0052others(63): Show | 77 | 380 | 0.2026 | 2 | c.829 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56426589 | G | GTA | intron_variant | MODIFIER | HG00140.hp1 HG00544.hp1 HG00544.hp2 others(33): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0014a0001c0001t0001g0022a0001c0001t0001g0023others(31): Show | 36 | 380 | 0.0947 | 2 | c.964 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56426624 | T | TAC | intron_variant | MODIFIER | HG00438.hp1 HG02055.hp1 HG02602.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0047a0001c0001t0002g0207a0001c0001t0002g0212others(2): Show | 5 | 380 | 0.0132 | 2 | c.964 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56426640 | C | CAA | intron_variant | MODIFIER | NA18959.hp2 NA18962.hp1 NA18968.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0206a0001c0001t0002g0216a0001c0001t0002g0224others(3): Show | 6 | 380 | 0.0158 | 2 | c.964 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TEX9_chr15_56360426_56435154 | 56427292 | A | AAT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(314): Show |
a0001a0005a0007others(1): Show | a0001c0001a0001c0009a0005c0010others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0003a0001c0001t0001g0019a0001c0001t0001g0020others(278): Show | 317 | 380 | 0.8342 | 2 | c.964 others(17): Show |
TEX9 | ENSG00000151575.15 | transcript | ENST00000696102.1 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
TFAM_chr10_58380410_58404220 | 58392449 | C | CCT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(431): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(47): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0009others(107): Show | 434 | 434 | 1.0000 | 2 | c.537 others(19): Show |
TFAM | ENSG00000108064.11 | transcript | ENST00000487519.6 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
TFAM_chr10_58380410_58404220 | 58397749 | T | TTG | 3_prime_UTR_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(88): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0003a0001c0001t0008a0001c0001t0018others(10): Show | a0001c0001t0003g0004a0001c0001t0003g0007a0001c0001t0003g0011others(28): Show | 91 | 434 | 0.2097 | 2 | c.*26 others(13): Show |
TFAM | ENSG00000108064.11 | transcript | ENST00000487519.6 | protein_coding | 7/7 | 2700 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||
TFAP2A_chr6_10391677_10420074 | 10392098 | C | CTT | downstream_gene_variant | MODIFIER | HG01175.hp2 HG01243.hp1 HG01243.hp2 others(20): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(6): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0046others(15): Show | 23 | 368 | 0.0625 | 2 | c.*63 others(13): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 4578 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10399896 | G | GTC | intron_variant | MODIFIER | HG02135.hp1 HG02965.hp2 HG03139.hp1 others(7): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(2): Show | a0001c0001t0001g0046a0001c0001t0001g0077a0001c0001t0001g0083others(6): Show | 10 | 368 | 0.0272 | 2 | c.103 others(19): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 6/6 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10402205 | C | CAG | intron_variant | MODIFIER | HG00558.hp2 HG00609.hp1 HG00609.hp2 others(162): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(23): Show | a0001c0001t0002g0003a0001c0001t0002g0007a0001c0001t0002g0019others(94): Show | 165 | 368 | 0.4484 | 2 | c.889 others(17): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 5/6 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10403617 | C | CAT | intron_variant | MODIFIER | HG00738.hp2 HG01891.hp2 HG02257.hp2 others(36): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0015a0001c0001t0026a0001c0002t0004others(2): Show | a0001c0001t0015g0197a0001c0001t0026g0202a0001c0002t0004g0004others(16): Show | 39 | 368 | 0.1060 | 2 | c.770 others(17): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 4/6 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10407500 | C | CTT | intron_variant | MODIFIER | HG00738.hp2 HG02257.hp2 HG03195.hp2 others(25): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0015a0001c0001t0026a0001c0002t0004others(1): Show | a0001c0001t0015g0197a0001c0001t0026g0202a0001c0002t0004g0004others(10): Show | 28 | 368 | 0.0761 | 2 | c.487 others(17): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 2/6 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10411046 | G | GCC | intron_variant | MODIFIER | HG00544.hp1 HG00544.hp2 HG00597.hp2 others(27): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0024a0001c0001t0001g0081a0001c0001t0001g0082others(16): Show | 30 | 368 | 0.0815 | 2 | c.52- others(15): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 1/6 | chr6 | TogoVar | ||||||
TFAP2A_chr6_10391677_10420074 | 10416429 | G | GAA | upstream_gene_variant | MODIFIER | HG00738.hp2 HG01070.hp2 HG01167.hp1 others(35): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0103others(21): Show | 38 | 368 | 0.1033 | 2 | c.-14 others(13): Show |
TFAP2A | ENSG00000137203.15 | transcript | ENST00000379613.10 | protein_coding | 1356 | chr6 | TogoVar | ||||||
TFAP2B_chr6_50813871_50852619 | 50821976 | T | TGG | intron_variant | MODIFIER | HG01192.hp1 HG02109.hp1 HG02647.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(4): Show | a0001c0001t0001g0179a0001c0001t0003g0111a0001c0001t0003g0154others(10): Show | 13 | 382 | 0.0340 | 2 | c.82- others(17): Show |
TFAP2B | ENSG00000008196.13 | transcript | ENST00000393655.4 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TFAP2B_chr6_50813871_50852619 | 50821991 | A | ATT | intron_variant | MODIFIER | HG00544.hp2 HG00673.hp2 HG01255.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(3): Show | a0001c0001t0001g0024a0001c0001t0001g0158a0001c0001t0001g0172others(11): Show | 19 | 382 | 0.0497 | 2 | c.82- others(17): Show |
TFAP2B | ENSG00000008196.13 | transcript | ENST00000393655.4 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TFAP2B_chr6_50813871_50852619 | 50826566 | A | AGC | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(67): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0013a0001c0001t0001g0021a0001c0001t0001g0050others(49): Show | 70 | 382 | 0.1833 | 2 | c.541 others(19): Show |
TFAP2B | ENSG00000008196.13 | transcript | ENST00000393655.4 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TFAP2B_chr6_50813871_50852619 | 50826586 | C | CGT | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00408.hp2 others(122): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(17): Show | a0001c0001t0001g0078a0001c0001t0002g0002a0001c0001t0002g0005others(61): Show | 125 | 382 | 0.3272 | 2 | c.541 others(19): Show |
TFAP2B | ENSG00000008196.13 | transcript | ENST00000393655.4 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TFAP2B_chr6_50813871_50852619 | 50844300 | A | AAC | 3_prime_UTR_variant | MODIFIER | HG00597.hp1 HG01978.hp2 HG01981.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0016a0001c0001t0018others(1): Show | a0001c0001t0004g0007a0001c0001t0004g0009a0001c0001t0004g0017others(9): Show | 24 | 382 | 0.0628 | 2 | c.*90 others(11): Show |
TFAP2B | ENSG00000008196.13 | transcript | ENST00000393655.4 | protein_coding | 7/7 | 910 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||
TFAP2C_chr20_56624306_56644283 | 56632729 | T | TGA | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp2 others(190): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0006others(65): Show | 193 | 360 | 0.5361 | 2 | c.587 others(17): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TFAP2C_chr20_56624306_56644283 | 56636525 | C | CAA | intron_variant | MODIFIER | HG00621.hp2 HG02129.hp1 HG02922.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0014others(2): Show | a0001c0001t0001g0006a0001c0001t0002g0006a0001c0001t0014g0076others(2): Show | 13 | 360 | 0.0361 | 2 | c.923 others(15): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TFAP2C_chr20_56624306_56644283 | 56638659 | C | CTT | 3_prime_UTR_variant | MODIFIER | HG02257.hp2 HG02647.hp2 HG02723.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0013a0001c0001t0022 | a0001c0001t0009g0002a0001c0001t0009g0013a0001c0001t0013g0024others(1): Show | 9 | 360 | 0.0250 | 2 | c.*66 others(11): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 7/7 | 668 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||
TFAP2C_chr20_56624306_56644283 | 56642776 | A | ATT | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00423.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0019a0001c0002t0001 | a0001c0001t0002g0002a0001c0001t0002g0003a0001c0001t0019g0004others(2): Show | 6 | 360 | 0.0167 | 2 | c.*47 others(13): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 3494 | chr20 | TogoVar | ||||||
TFAP2C_chr20_56624306_56644283 | 56643563 | C | CGT | downstream_gene_variant | MODIFIER | HG00639.hp1 HG01109.hp1 HG01168.hp2 others(33): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0016others(8): Show | 36 | 360 | 0.1000 | 2 | c.*55 others(13): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 4281 | chr20 | TogoVar | ||||||
TFAP2C_chr20_56624306_56644283 | 56643582 | G | GTC | downstream_gene_variant | MODIFIER | HG02257.hp2 HG02258.hp2 HG02647.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0009 | a0001c0001t0002g0013a0001c0001t0009g0013 | 5 | 360 | 0.0139 | 2 | c.*55 others(13): Show |
TFAP2C | ENSG00000087510.7 | transcript | ENST00000201031.3 | protein_coding | 4300 | chr20 | TogoVar | ||||||
TFAP2D_chr6_50708526_50778033 | 50710573 | G | GAT | upstream_gene_variant | MODIFIER | HG01123.hp2 HG01891.hp2 HG01934.hp1 others(32): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0002 | a0001c0001t0002a0001c0001t0003a0001c0006t0002others(1): Show | a0001c0001t0002g0042a0001c0001t0002g0047a0001c0001t0003g0001others(31): Show | 35 | 334 | 0.1048 | 2 | c.-34 others(13): Show |
TFAP2D | ENSG00000008197.5 | transcript | ENST00000008391.4 | protein_coding | 2952 | chr6 | TogoVar |