regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TGM3_chr20_2291001_2346079 | 2343246 | T | TAA | downstream_gene_variant | MODIFIER | HG01109.hp1 HG01952.hp2 HG02970.hp1 others(3): Show |
a0003a0004a0005 | a0003c0003a0004c0004a0005c0005 | a0003c0003t0001a0004c0004t0001a0005c0005t0005 | a0003c0003t0001g0268a0003c0003t0001g0304a0004c0004t0001g0278others(3): Show | 6 | 360 | 0.0167 | 2 | c.*26 others(13): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 2168 | chr20 | TogoVar | ||||||
TGM3_chr20_2291001_2346079 | 2345345 | C | CAA | downstream_gene_variant | MODIFIER | HG01109.hp1 HG01952.hp2 HG02970.hp1 others(4): Show |
a0001a0003a0004others(1): Show | a0001c0001a0003c0003a0004c0004others(1): Show | a0001c0001t0001a0003c0003t0001a0004c0004t0001others(1): Show | a0001c0001t0001g0246a0003c0003t0001g0268a0003c0003t0001g0304others(4): Show | 7 | 360 | 0.0194 | 2 | c.*47 others(13): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 4267 | chr20 | TogoVar | ||||||
TGM4_chr3_44869608_44919990 | 44879237 | G | GTC | intron_variant | MODIFIER | HG02145.hp2 HG02723.hp1 HG02970.hp1 others(4): Show |
a0005a0008a0009 | a0005c0005a0008c0007a0009c0008 | a0005c0005t0001a0008c0007t0001a0009c0008t0004 | a0005c0005t0001g0007a0005c0005t0001g0102a0005c0005t0001g0103others(3): Show | 7 | 314 | 0.0223 | 2 | c.19+ others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44879263 | C | CTA | intron_variant | MODIFIER | HG01109.hp2 HG02486.hp1 HG03516.hp1 |
a0002a0005a0008 | a0002c0013a0005c0005a0008c0007 | a0002c0013t0006a0005c0005t0001a0008c0007t0001 | a0002c0013t0006g0168a0005c0005t0001g0101a0008c0007t0001g0034 | 3 | 314 | 0.0096 | 2 | c.19+ others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44879265 | C | CTA | intron_variant | MODIFIER | HG02109.hp2 HG02622.hp2 HG02630.hp1 others(6): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0002c0013others(1): Show | a0001c0001t0001a0002c0002t0002a0002c0013t0006others(1): Show | a0001c0001t0001g0130a0002c0002t0002g0137a0002c0013t0006g0156others(5): Show | 9 | 314 | 0.0287 | 2 | c.19+ others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44882057 | C | CTT | intron_variant | MODIFIER | HG02055.hp2 HG02074.hp1 HG02809.hp1 others(16): Show |
a0002a0003a0005others(6): Show | a0002c0002a0003c0003a0005c0005others(6): Show | a0002c0002t0002a0003c0003t0001a0005c0005t0001others(6): Show | a0002c0002t0002g0036a0002c0002t0002g0065a0002c0002t0002g0087others(16): Show | 19 | 314 | 0.0605 | 2 | c.20- others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44889170 | T | TAA | intron_variant | MODIFIER | HG00408.hp2 HG00673.hp1 HG00673.hp2 others(32): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0002c0002t0002a0003c0003t0001others(5): Show | a0001c0001t0001g0013a0001c0001t0001g0159a0001c0001t0001g0160others(31): Show | 35 | 314 | 0.1115 | 2 | c.301 others(19): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 3/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44891371 | C | CCT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00408.hp2 others(218): Show |
a0001a0002a0003others(20): Show | a0001c0001a0001c0014a0002c0002others(24): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0013others(33): Show | a0001c0001t0001g0012a0001c0001t0001g0013a0001c0001t0001g0014others(205): Show | 221 | 314 | 0.7038 | 2 | c.430 others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 4/13 | chr3 | TogoVar | ||||||
TGM4_chr3_44869608_44919990 | 44891512 | T | TAC | intron_variant | MODIFIER | HG00099.hp1 HG02809.hp1 HG02895.hp2 others(6): Show |
a0001a0008a0011others(1): Show | a0001c0001a0008c0007a0011c0011others(1): Show | a0001c0001t0001a0008c0007t0001a0011c0011t0001others(1): Show | a0001c0001t0001g0216a0008c0007t0001g0055a0011c0011t0001g0023others(6): Show | 9 | 314 | 0.0287 | 2 | c.430 others(17): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44916827 | G | GGT | downstream_gene_variant | MODIFIER | HG02895.hp2 HG02896.hp1 HG02970.hp2 others(1): Show |
a0003a0011 | a0003c0003a0011c0011 | a0003c0003t0001a0011c0011t0001 | a0003c0003t0001g0271a0003c0003t0001g0272a0011c0011t0001g0026others(1): Show | 4 | 314 | 0.0127 | 2 | c.*31 others(13): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 1838 | chr3 | TogoVar | ||||||
TGM5_chr15_43227590_43271928 | 43227769 | C | CAA | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00642.hp2 HG00733.hp1 others(20): Show |
a0001a0002a0007 | a0001c0001a0002c0003a0007c0017 | a0001c0001t0001a0002c0003t0001a0007c0017t0001 | a0001c0001t0001g0002a0001c0001t0001g0018a0001c0001t0001g0019others(13): Show | 23 | 334 | 0.0689 | 2 | c.*54 others(13): Show |
TGM5 | ENSG00000104055.17 | transcript | ENST00000220420.10 | protein_coding | 4820 | chr15 | TogoVar | ||||||
TGM6_chr20_2375901_2437753 | 2376072 | C | CAA | upstream_gene_variant | MODIFIER | HG01952.hp2 HG02293.hp2 HG02486.hp2 others(14): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0014a0001c0001t0001g0164a0001c0001t0001g0172others(14): Show | 17 | 420 | 0.0405 | 2 | c.-48 others(13): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 4828 | chr20 | TogoVar | ||||||
TGM6_chr20_2375901_2437753 | 2377444 | C | CAA | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(140): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0004others(17): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(25): Show | a0001c0001t0001g0001a0001c0001t0001g0067a0001c0001t0001g0207others(122): Show | 143 | 420 | 0.3405 | 2 | c.-35 others(13): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 3456 | chr20 | TogoVar | ||||||
TGM6_chr20_2375901_2437753 | 2379429 | C | CAA | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00597.hp2 others(91): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0002a0001c0004others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(15): Show | a0001c0001t0001g0005a0001c0001t0001g0038a0001c0001t0001g0040others(81): Show | 94 | 420 | 0.2238 | 2 | c.-15 others(13): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1471 | chr20 | TogoVar | ||||||
TGM6_chr20_2375901_2437753 | 2381997 | C | CTA | intron_variant | MODIFIER | HG01891.hp1 HG02886.hp2 HG02970.hp1 others(4): Show |
a0003a0019a0020others(1): Show | a0003c0009a0003c0024a0019c0025others(2): Show | a0003c0009t0001a0003c0024t0001a0019c0025t0001others(2): Show | a0003c0009t0001g0009a0003c0009t0001g0199a0003c0024t0001g0200others(3): Show | 7 | 420 | 0.0167 | 2 | c.7+1 others(15): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2381997 | C | CTG | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(328): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0002a0001c0004others(21): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0010others(296): Show | 331 | 420 | 0.7881 | 2 | c.7+1 others(15): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2384106 | C | CAA | intron_variant | MODIFIER | HG00673.hp1 HG00741.hp2 HG01109.hp2 others(20): Show |
a0001a0003a0020 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(5): Show | a0001c0001t0001g0370a0001c0001t0002g0036a0001c0002t0001g0013others(15): Show | 23 | 420 | 0.0548 | 2 | c.7+3 others(15): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2388624 | C | CAA | intron_variant | MODIFIER | HG00323.hp1 HG00609.hp1 HG00642.hp1 others(28): Show |
a0001a0003a0013others(1): Show | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(6): Show | a0001c0001t0001g0164a0001c0001t0001g0172a0001c0001t0001g0173others(28): Show | 31 | 420 | 0.0738 | 2 | c.8-5 others(15): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2399156 | A | AAG | intron_variant | MODIFIER | HG00323.hp1 HG01106.hp1 HG01106.hp2 others(13): Show |
a0001a0004a0015 | a0001c0001a0001c0002a0004c0030others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(2): Show | a0001c0001t0001g0065a0001c0001t0001g0164a0001c0001t0001g0179others(13): Show | 16 | 420 | 0.0381 | 2 | c.673 others(17): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2401207 | C | CAA | intron_variant | MODIFIER | HG00733.hp1 HG01255.hp1 HG01515.hp1 others(17): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(4): Show | a0001c0001t0001g0307a0001c0001t0001g0370a0001c0001t0002g0090others(16): Show | 20 | 420 | 0.0476 | 2 | c.989 others(17): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2406492 | C | CAA | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(226): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0002a0001c0004others(22): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0010others(196): Show | 229 | 420 | 0.5452 | 2 | c.133 others(21): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2406831 | C | CAA | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(34): Show |
a0001a0002a0016 | a0001c0001a0001c0004a0002c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(3): Show | a0001c0001t0001g0049a0001c0001t0001g0065a0001c0001t0002g0011others(30): Show | 37 | 420 | 0.0881 | 2 | c.133 others(21): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2411456 | T | TAA | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(84): Show |
a0001a0002a0015others(1): Show | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0010others(70): Show | 87 | 420 | 0.2071 | 2 | c.133 others(21): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2422949 | C | CAA | intron_variant | MODIFIER | HG00438.hp1 HG00609.hp2 HG00639.hp1 others(112): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0001c0004others(15): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(15): Show | a0001c0001t0001g0046a0001c0001t0001g0049a0001c0001t0001g0053others(107): Show | 115 | 420 | 0.2738 | 2 | c.167 others(21): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2428967 | G | GCA | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(237): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0002a0001c0004others(26): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(26): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0010others(212): Show | 240 | 420 | 0.5714 | 2 | c.167 others(21): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM6_chr20_2375901_2437753 | 2433984 | C | CAA | downstream_gene_variant | MODIFIER | HG00735.hp1 HG00735.hp2 HG00741.hp1 others(15): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(4): Show | a0001c0001t0001g0010a0001c0001t0001g0038a0001c0001t0001g0327others(13): Show | 18 | 420 | 0.0429 | 2 | c.*13 others(13): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1232 | chr20 | TogoVar | ||||||
TGM6_chr20_2375901_2437753 | 2434677 | T | TAA | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(159): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0002others(14): Show | a0001c0001t0001g0327a0001c0001t0002g0004a0001c0001t0002g0011others(141): Show | 162 | 420 | 0.3857 | 2 | c.*20 others(13): Show |
TGM6 | ENSG00000166948.10 | transcript | ENST00000202625.7 | protein_coding | 1925 | chr20 | TogoVar | ||||||
TGM7_chr15_43271271_43307255 | 43274802 | C | CAA | downstream_gene_variant | MODIFIER | HG00741.hp1 HG01243.hp2 HG01361.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0049a0001c0001t0001g0050others(5): Show | 8 | 342 | 0.0234 | 2 | c.*16 others(13): Show |
TGM7 | ENSG00000159495.8 | transcript | ENST00000452443.3 | protein_coding | 1468 | chr15 | TogoVar | ||||||
TGM7_chr15_43271271_43307255 | 43275308 | G | GTT | downstream_gene_variant | MODIFIER | HG02055.hp1 HG02055.hp2 HG02145.hp1 others(7): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0009a0001c0001t0001g0012a0001c0001t0001g0040others(7): Show | 10 | 342 | 0.0292 | 2 | c.*11 others(13): Show |
TGM7 | ENSG00000159495.8 | transcript | ENST00000452443.3 | protein_coding | 962 | chr15 | TogoVar | ||||||
TGM7_chr15_43271271_43307255 | 43284343 | T | TAC | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(199): Show |
a0001a0002a0006others(2): Show | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(6): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0009others(142): Show | 202 | 342 | 0.5906 | 2 | c.100 others(19): Show |
TGM7 | ENSG00000159495.8 | transcript | ENST00000452443.3 | protein_coding | 7/12 | chr15 | TogoVar | ||||||
TGM7_chr15_43271271_43307255 | 43285849 | A | AAC | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(204): Show |
a0001a0002a0006others(2): Show | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0009others(145): Show | 207 | 342 | 0.6053 | 2 | c.866 others(17): Show |
TGM7 | ENSG00000159495.8 | transcript | ENST00000452443.3 | protein_coding | 6/12 | chr15 | TogoVar | ||||||
TGM7_chr15_43271271_43307255 | 43296424 | C | CAA | intron_variant | MODIFIER | HG00438.hp2 HG01361.hp2 HG02055.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0013a0001c0001t0001g0035a0001c0001t0001g0106others(12): Show | 19 | 342 | 0.0556 | 2 | c.11- others(17): Show |
TGM7 | ENSG00000159495.8 | transcript | ENST00000452443.3 | protein_coding | 1/12 | chr15 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55769018 | T | TTA | upstream_gene_variant | MODIFIER | HG00673.hp2 HG01891.hp1 HG02559.hp1 others(31): Show |
a0001a0008a0017others(1): Show | a0001c0001a0001c0009a0008c0011others(2): Show | a0001c0001t0001a0001c0001t0011a0001c0009t0001others(3): Show | a0001c0001t0001g0015a0001c0001t0001g0016a0001c0001t0001g0018others(27): Show | 34 | 370 | 0.0919 | 2 | c.-46 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 4427 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55771441 | A | AAC | upstream_gene_variant | MODIFIER | HG01884.hp1 HG02109.hp1 HG03139.hp1 others(1): Show |
a0005 | a0005c0005 | a0005c0005t0009 | a0005c0005t0009g0278a0005c0005t0009g0279a0005c0005t0009g0280others(1): Show | 4 | 370 | 0.0108 | 2 | c.-21 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 2004 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55776277 | C | CTT | intron_variant | MODIFIER | HG02257.hp2 HG02723.hp2 HG02818.hp1 others(4): Show |
a0003 | a0003c0003 | a0003c0003t0005 | a0003c0003t0005g0313a0003c0003t0005g0314a0003c0003t0005g0315others(4): Show | 7 | 370 | 0.0189 | 2 | c.101 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55780175 | T | TTC | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp1 HG01255.hp2 others(12): Show |
a0002 | a0002c0002a0002c0027 | a0002c0002t0003a0002c0027t0003 | a0002c0002t0003g0292a0002c0002t0003g0293a0002c0002t0003g0294others(12): Show | 15 | 370 | 0.0405 | 2 | c.102 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 1/12 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55790966 | T | TTC | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp2 others(187): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0008a0001c0014others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0008others(164): Show | 190 | 370 | 0.5135 | 2 | c.128 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55801582 | C | CCT | intron_variant | MODIFIER | HG00639.hp2 HG01257.hp1 HG01258.hp1 others(6): Show |
a0002a0005a0006 | a0002c0002a0002c0027a0005c0005others(1): Show | a0002c0002t0003a0002c0027t0003a0005c0005t0009others(1): Show | a0002c0002t0003g0286a0002c0002t0003g0300a0002c0002t0003g0301others(4): Show | 9 | 370 | 0.0243 | 2 | c.185 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 8/12 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55801582 | C | CTT | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00408.hp2 others(143): Show |
a0001a0004a0013others(2): Show | a0001c0001a0001c0007a0001c0008others(6): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(12): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0008others(125): Show | 146 | 370 | 0.3946 | 2 | c.185 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55803130 | G | GGT | intron_variant | MODIFIER | HG00673.hp2 HG01109.hp1 HG01192.hp1 others(50): Show |
a0001a0003a0004others(3): Show | a0001c0001a0001c0009a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0011a0001c0009t0001others(6): Show | a0001c0001t0001g0015a0001c0001t0001g0016a0001c0001t0001g0018others(46): Show | 53 | 370 | 0.1432 | 2 | c.199 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55806356 | C | CAA | intron_variant | MODIFIER | HG01109.hp1 HG01255.hp2 HG01433.hp2 others(10): Show |
a0001a0002a0003others(4): Show | a0001c0008a0002c0002a0003c0003others(4): Show | a0001c0008t0001a0002c0002t0003a0003c0003t0005others(4): Show | a0001c0008t0001g0175a0002c0002t0003g0290a0002c0002t0003g0307others(10): Show | 13 | 370 | 0.0351 | 2 | c.214 others(21): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55807506 | G | GTT | intron_variant | MODIFIER | HG00408.hp1 HG01978.hp1 HG02165.hp1 others(7): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0005 | a0001c0001t0001g0028a0001c0001t0001g0189a0001c0001t0001g0219others(6): Show | 10 | 370 | 0.0270 | 2 | c.214 others(21): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55812495 | C | CAA | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00408.hp2 others(91): Show |
a0001a0004a0013others(1): Show | a0001c0001a0001c0007a0001c0008others(6): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(11): Show | a0001c0001t0001g0004a0001c0001t0001g0008a0001c0001t0001g0021others(82): Show | 94 | 370 | 0.2541 | 2 | c.236 others(19): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55814674 | A | AAT | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01192.hp1 others(6): Show |
a0001a0004a0009others(1): Show | a0001c0001a0004c0004a0009c0010others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(3): Show | a0001c0001t0001g0219a0001c0001t0006g0194a0001c0001t0007g0040others(5): Show | 9 | 370 | 0.0243 | 2 | c.243 others(21): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TGS1_chr8_55768446_55831445 | 55827688 | G | GTT | downstream_gene_variant | MODIFIER | HG00140.hp1 HG01109.hp1 HG01255.hp2 others(11): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0003others(2): Show | a0001c0001t0001g0142a0001c0001t0002g0102a0002c0002t0003g0288others(11): Show | 14 | 370 | 0.0378 | 2 | c.*29 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 1244 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55828234 | A | ATT | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00741.hp1 HG01255.hp2 others(32): Show |
a0002a0005a0006others(2): Show | a0002c0002a0005c0005a0006c0006others(2): Show | a0002c0002t0003a0005c0005t0009a0006c0006t0003others(2): Show | a0002c0002t0003g0029a0002c0002t0003g0034a0002c0002t0003g0281others(29): Show | 35 | 370 | 0.0946 | 2 | c.*35 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 1790 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55828763 | C | CTT | downstream_gene_variant | MODIFIER | HG02071.hp1 HG02080.hp2 HG03239.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0007a0001c0001t0002g0063a0001c0001t0002g0065others(3): Show | 6 | 370 | 0.0162 | 2 | c.*40 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 2319 | chr8 | TogoVar | ||||||
TGS1_chr8_55768446_55831445 | 55829257 | A | ATT | downstream_gene_variant | MODIFIER | HG00323.hp1 HG01891.hp1 HG02559.hp1 others(7): Show |
a0001a0017a0018 | a0001c0001a0017c0019a0018c0018 | a0001c0001t0001a0001c0001t0004a0017c0019t0001others(1): Show | a0001c0001t0001g0033a0001c0001t0001g0114a0001c0001t0001g0115others(6): Show | 10 | 370 | 0.0270 | 2 | c.*45 others(13): Show |
TGS1 | ENSG00000137574.11 | transcript | ENST00000260129.6 | protein_coding | 2813 | chr8 | TogoVar | ||||||
TG_chr8_132861958_133139899 | 132878501 | A | ATC | intron_variant | MODIFIER | HG00544.hp1 HG02074.hp2 NA19007.hp1 others(1): Show |
a0026a0029 | a0026c0016a0029c0015 | a0026c0016t0001a0029c0015t0001 | a0026c0016t0001g0213a0026c0016t0001g0216a0029c0015t0001g0214others(1): Show | 4 | 216 | 0.0185 | 2 | c.639 others(19): Show |
TG | ENSG00000042832.12 | transcript | ENST00000220616.9 | protein_coding | 5/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TG_chr8_132861958_133139899 | 132888595 | A | ATG | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00544.hp2 others(85): Show |
a0002a0004a0005others(47): Show | a0002c0001a0002c0143a0004c0004others(50): Show | a0002c0001t0001a0002c0143t0001a0004c0004t0001others(50): Show | a0002c0001t0001g0010a0002c0001t0001g0091a0002c0001t0001g0092others(85): Show | 88 | 216 | 0.4074 | 2 | c.276 others(17): Show |
TG | ENSG00000042832.12 | transcript | ENST00000220616.9 | protein_coding | 10/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar |