Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THNSL2_chr2_88165346_88191627	88181312	C C	CCT CCT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01081.hp1 HG01258.hp2 others(6): Show HG01074.hp1 HG01081.hp1 HG01258.hp2 HG01943.hp1 HG01975.hp2 HG02273.hp1 HG02273.hp2 HG02523.hp2 HG03492.hp1	a0001 a0003 a0009 a0001 a0003 a0009	a0001c0001 a0001c0003 a0003c0005 others(1): Show a0001c0001 a0001c0003 a0003c0005 a0009c0006	a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 others(3): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 a0001c0003t0003 a0003c0005t0003 a0009c0006t0003	a0001c0001t0002g0049 a0001c0001t0004g0012 a0001c0001t0004g0013 others(6): Show a0001c0001t0002g0049 a0001c0001t0004g0012 a0001c0001t0004g0013 a0001c0001t0011g0033 a0001c0003t0003g0008 a0001c0003t0003g0009 a0003c0005t0003g0004 a0003c0005t0003g0006 a0009c0006t0003g0047	9	54	0.1667	2	c.803 others(19): Show c.803-1379_803-1378dupTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88181350	C C	CCT CCT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01081.hp1 HG02015.hp2 HG00639.hp2 HG01081.hp1 HG02015.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001	a0001c0001t0002g0049 a0001c0001t0004g0010 a0002c0002t0001g0051 a0001c0001t0002g0049 a0001c0001t0004g0010 a0002c0002t0001g0051	3	54	0.0556	2	c.803 others(19): Show c.803-1341_803-1340dupTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88181369	T T	TCC TCC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01070.hp1 HG02735.hp1 others(1): Show HG00323.hp1 HG01070.hp1 HG02735.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0044 a0001c0001t0002g0046 others(1): Show a0001c0001t0002g0039 a0001c0001t0002g0044 a0001c0001t0002g0046 a0001c0001t0002g0050	4	54	0.0741	2	c.803 others(19): Show c.803-1329_803-1328dupCC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88181423	C C	CCT CCT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02015.hp2 HG03669.hp2 HG00323.hp2 HG02015.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009	a0001c0001t0002g0040 a0001c0001t0004g0010 a0001c0001t0009g0038 a0001c0001t0002g0040 a0001c0001t0004g0010 a0001c0001t0009g0038	3	54	0.0556	2	c.803 others(19): Show c.803-1268_803-1267dupTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88181573	C C	CTG CTG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02615.hp2 HG00639.hp1 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0028 a0001c0001t0005g0037 a0001c0001t0004g0028 a0001c0001t0005g0037	2	54	0.0370	2	c.803 others(19): Show c.803-1106_803-1105dupGT	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88188858	C C	CCA CCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG03209.hp1 HG03669.hp1 others(1): Show HG00099.hp2 HG03209.hp1 HG03669.hp1 NA19081.hp1	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0003 a0004c0004 others(1): Show a0001c0001 a0001c0003 a0004c0004 a0006c0009	a0001c0001t0012 a0001c0003t0008 a0004c0004t0007 others(1): Show a0001c0001t0012 a0001c0003t0008 a0004c0004t0007 a0006c0009t0002	a0001c0001t0012g0031 a0001c0003t0008g0032 a0004c0004t0007g0014 others(1): Show a0001c0001t0012g0031 a0001c0003t0008g0032 a0004c0004t0007g0014 a0006c0009t0002g0041	4	54	0.0741	2	c.27 others(13): Show c.2735_*2736insCA	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding		2232		chr2	TogoVar
THOC1_chr18_209520_273047	212557	T T	TCA TCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02257.hp1 HG02280.hp2 others(10): Show HG02109.hp2 HG02257.hp1 HG02280.hp2 HG02717.hp2 HG02818.hp2 HG02922.hp1 HG02976.hp2 HG03209.hp2 HG03239.hp1 HG03491.hp1 HG03492.hp1 HG03579.hp2 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0015 a0001c0001t0001g0042 a0001c0001t0001g0066 others(9): Show a0001c0001t0001g0015 a0001c0001t0001g0042 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0007t0001g0115	13	376	0.0346	2	c.20 others(13): Show c.2067_*2068dupTG	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding		1962		chr18	TogoVar
THOC1_chr18_209520_273047	213122	G G	GTA GTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00642.hp2 HG01099.hp2 others(20): Show HG00280.hp2 HG00642.hp2 HG01099.hp2 HG01175.hp1 HG01257.hp1 HG01358.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp1 HG01978.hp2 HG02055.hp2 HG02148.hp1 HG02602.hp2 HG02698.hp1 HG02809.hp2 HG02896.hp1 HG02970.hp2 HG03490.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp2 NA19030.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0005t0002 a0001c0001t0001 a0001c0001t0002 a0001c0005t0002	a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 others(16): Show a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0045 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0005t0002g0048	23	376	0.0612	2	c.15 others(13): Show c.1502_*1503dupTA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding		1397		chr18	TogoVar
THOC1_chr18_209520_273047	221606	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG02129.hp1 others(3): Show HG01884.hp1 HG01884.hp2 HG02129.hp1 HG02145.hp1 HG02300.hp2 NA18949.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0089 a0001c0001t0001g0093 others(3): Show a0001c0001t0001g0080 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0108 a0001c0001t0001g0118 a0001c0001t0001g0119	6	376	0.0160	2	c.137 others(21): Show c.1370+1832_1370+1833dupAA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	17/20			chr18	TogoVar
THOC1_chr18_209520_273047	235085	A A	ATT ATT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01891.hp2 HG02257.hp1 others(18): Show HG00423.hp2 HG01891.hp2 HG02257.hp1 HG02280.hp2 HG02451.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03239.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp2 NA18906.hp1 NA19012.hp1 NA19043.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0015 a0001c0001t0001g0042 a0001c0001t0001g0058 others(17): Show a0001c0001t0001g0015 a0001c0001t0001g0042 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0086 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0201 a0001c0002t0001g0166	21	376	0.0559	2	c.919 others(19): Show c.919-8186_919-8185dupAA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	11/20			chr18	TogoVar
THOC1_chr18_209520_273047	245168	A A	AAT AAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01070.hp2 HG01071.hp2 others(8): Show HG00642.hp1 HG01070.hp2 HG01071.hp2 HG01891.hp2 HG02451.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG03209.hp1 HG03540.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0121 a0001c0001t0001g0125 others(6): Show a0001c0001t0001g0008 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0145	11	376	0.0293	2	c.918 others(19): Show c.918+1154_918+1155dupAT	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	11/20			chr18	TogoVar
THOC1_chr18_209520_273047	246916	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00673.hp2 NA19002.hp2 NA19060.hp2 others(3): Show HG00673.hp2 NA19002.hp2 NA19060.hp2 NA19067.hp2 NA19070.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0218 a0001c0001t0001g0223 others(2): Show a0001c0001t0001g0035 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0251 a0001c0001t0001g0252	6	376	0.0160	2	c.787 others(17): Show c.787-463_787-462dupTT	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	10/20			chr18	TogoVar
THOC1_chr18_209520_273047	249668	G G	GAA GAA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01070.hp1 HG01081.hp1 others(38): Show HG00733.hp1 HG01070.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01257.hp2 HG01258.hp2 HG01884.hp1 HG01943.hp2 HG01981.hp1 HG02109.hp1 HG02145.hp1 HG02258.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02976.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03704.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 NA18522.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 others(33): Show a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0203	41	376	0.1090	2	c.678 others(19): Show c.678-1713_678-1712dupTT	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	9/20			chr18	TogoVar
THOC1_chr18_209520_273047	266539	A A	ATT ATT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00733.hp1 HG01070.hp1 others(63): Show HG00280.hp2 HG00733.hp1 HG01070.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp2 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02055.hp2 HG02148.hp1 HG02258.hp2 HG02451.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02886.hp1 HG02896.hp1 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp2 HG03669.hp2 HG03704.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18949.hp2 NA19030.hp2 NA19043.hp1 NA19240.hp1 NA20752.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0005t0002	a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 others(56): Show a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0203 a0001c0001t0002g0006 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0002t0001g0159 a0001c0005t0002g0048	66	376	0.1755	2	c.55- others(17): Show c.55-1011_55-1010dupAA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	1/20			chr18	TogoVar
THOC1_chr18_209520_273047	267019	G G	GTA GTA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02602.hp1 NA21309.hp2 HG02055.hp1 HG02602.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0303 a0001c0003t0001g0301 a0001c0003t0001g0302 a0001c0001t0001g0303 a0001c0003t0001g0301 a0001c0003t0001g0302	3	376	0.0080	2	c.54+ others(15): Show c.54+945_54+946dupTA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	1/20			chr18	TogoVar
THOC2_chrX_123595569_123738052	123598447	T T	TAA TAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG02738.hp1 HG01167.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0229 a0001c0001t0001g0104 a0001c0001t0001g0229	2	251	0.0080	2	c.29 others(13): Show c.2909_*2910insTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding		2121		chrX	TogoVar
THOC2_chrX_123595569_123738052	123611298	T T	TGA TGA	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	251	0.0040	2	c.475 others(19): Show c.4754+140_4754+141dupTC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	37/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123615656	T T	TAC TAC	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02109.hp2 HG02145.hp1 others(10): Show HG01952.hp1 HG02109.hp2 HG02145.hp1 HG02630.hp2 HG02922.hp2 HG02976.hp1 HG03471.hp1 HG03486.hp1 HG06807.hp1 NA18906.hp2 NA19043.hp1 NA20300.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0112 a0001c0001t0001g0132 others(10): Show a0001c0001t0001g0093 a0001c0001t0001g0112 a0001c0001t0001g0132 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0230 a0001c0001t0001g0245 a0001c0001t0001g0247	13	251	0.0518	2	c.431 others(21): Show c.4312-1469_4312-1468dupGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	33/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123615680	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03139.hp1 HG06807.hp2 HG02818.hp2 HG03139.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0183 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0183	3	251	0.0120	2	c.431 others(21): Show c.4312-1493_4312-1492dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	33/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123616630	C C	CCT CCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02683.hp1 HG03239.hp1 others(1): Show HG00280.hp1 HG02683.hp1 HG03239.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 others(1): Show a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0098	4	251	0.0159	2	c.431 others(21): Show c.4312-2443_4312-2442dupAG	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	33/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123623501	C C	CTT CTT	intron_variant intron_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	251	0.0040	2	c.350 others(19): Show c.3504-220_3504-219dupAA	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	28/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123629206	A A	AAC AAC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01074.hp1 HG01123.hp1 others(53): Show HG00741.hp1 HG01074.hp1 HG01123.hp1 HG01175.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01978.hp1 HG02056.hp1 HG02083.hp1 HG02257.hp1 HG02293.hp1 HG02615.hp1 HG02622.hp2 HG02683.hp2 HG02809.hp1 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03486.hp1 HG03516.hp1 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18943.hp1 NA18957.hp2 NA18960.hp1 NA18977.hp1 NA18993.hp2 NA19004.hp1 NA19055.hp1 NA19065.hp2 NA19074.hp1 NA19085.hp1 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0010 others(53): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0154 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0199 a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0245 a0001c0001t0001g0246 a0003c0004t0001g0236	56	251	0.2231	2	c.248 others(21): Show c.2482-1240_2482-1239dupGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	22/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123629922	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0001 a0004c0008t0001	a0004c0008t0001g0084 a0004c0008t0001g0084	1	251	0.0040	2	c.248 others(21): Show c.2481+1765_2481+1766insCT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	22/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123630612	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01496.hp1 HG02055.hp1 others(13): Show HG00438.hp2 HG01496.hp1 HG02055.hp1 HG02145.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02809.hp2 HG03491.hp2 HG03492.hp1 HG03927.hp1 HG03927.hp2 HG04199.hp1 NA18942.hp2 NA18977.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0077 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0077 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0154 a0001c0001t0001g0162 a0001c0001t0001g0188 a0001c0001t0001g0204 a0001c0001t0001g0210 a0001c0001t0001g0213 a0001c0001t0001g0218 a0001c0001t0001g0228 a0001c0001t0001g0238 a0001c0005t0001g0111	16	251	0.0638	2	c.248 others(21): Show c.2481+1074_2481+1075dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	22/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123632489	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	251	0.0040	2	c.231 others(19): Show c.2316+370_2316+371dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	21/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123638727	T T	TAC TAC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01081.hp1 HG01243.hp1 others(21): Show HG00639.hp1 HG01081.hp1 HG01243.hp1 HG02109.hp1 HG02135.hp1 HG02273.hp1 HG02280.hp2 HG02523.hp1 HG02615.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02965.hp1 HG03098.hp1 HG03195.hp1 HG03486.hp2 HG03516.hp2 NA18940.hp1 NA18994.hp1 NA19006.hp1 NA19011.hp2 NA19083.hp1 NA19086.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0006 a0001c0001 a0001c0002 a0002c0006	a0001c0001t0001 a0001c0002t0001 a0002c0006t0001 a0001c0001t0001 a0001c0002t0001 a0002c0006t0001	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(21): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0074 a0001c0001t0001g0086 a0001c0001t0001g0128 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0168 a0001c0002t0001g0153 a0002c0006t0001g0147	24	251	0.0956	2	c.184 others(19): Show c.1840+205_1840+206dupGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	17/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123638735	C C	CGT CGT	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	251	0.0040	2	c.184 others(19): Show c.1840+198_1840+199insAC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	17/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123638750	A A	ACT ACT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02055.hp1 HG02559.hp2 others(3): Show HG01106.hp1 HG02055.hp1 HG02559.hp2 HG02809.hp2 HG02922.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 others(3): Show a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0162	6	251	0.0239	2	c.184 others(19): Show c.1840+182_1840+183dupAG	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	17/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123638769	T T	TAC TAC	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01106.hp1 HG02027.hp1 others(12): Show HG01099.hp1 HG01106.hp1 HG02027.hp1 HG02055.hp1 HG02258.hp1 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG03540.hp1 NA18960.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0108 a0001c0001t0001g0109 others(12): Show a0001c0001t0001g0019 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0168 a0001c0001t0001g0193	15	251	0.0598	2	c.184 others(19): Show c.1840+163_1840+164dupGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	17/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123641104	A A	AAT AAT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01106.hp1 HG02055.hp1 others(6): Show HG01099.hp1 HG01106.hp1 HG02055.hp1 HG02258.hp1 HG02559.hp1 HG02559.hp2 HG02809.hp2 HG02922.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 others(6): Show a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0162	9	251	0.0359	2	c.166 others(19): Show c.1662-483_1662-482insAT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	15/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123645949	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG03579.hp1 HG02129.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0165 a0001c0001t0001g0067 a0001c0001t0001g0165	2	251	0.0080	2	c.138 others(19): Show c.1387-576_1387-575dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123647840	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02922.hp2 HG03486.hp1 others(1): Show HG02056.hp1 HG02922.hp2 HG03486.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0179 a0001c0001t0001g0184 others(1): Show a0001c0001t0001g0132 a0001c0001t0001g0179 a0001c0001t0001g0184 a0001c0001t0001g0190	4	251	0.0159	2	c.138 others(21): Show c.1387-2467_1387-2466dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123651725	G G	GCC GCC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03927.hp1 HG02109.hp2 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0112 a0001c0001t0001g0012 a0001c0001t0001g0112	2	251	0.0080	2	c.138 others(21): Show c.1387-6352_1387-6351dupGG	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123654758	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02056.hp1 HG02148.hp1 others(3): Show HG01516.hp1 HG02056.hp1 HG02148.hp1 HG03927.hp2 NA18943.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0201 others(3): Show a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0201 a0001c0001t0001g0216 a0001c0001t0001g0235 a0001c0001t0001g0238	6	251	0.0239	2	c.138 others(21): Show c.1387-9385_1387-9384dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123656330	T T	TAA TAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03471.hp1 HG02622.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0093 a0001c0001t0001g0001 a0001c0001t0001g0093	2	251	0.0080	2	c.138 others(21): Show c.1386+9310_1386+9311dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123656352	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18994.hp1 NA19006.hp1 NA19066.hp1 NA18994.hp1 NA19006.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0037 a0001c0001t0001g0086 a0001c0001t0001g0015 a0001c0001t0001g0037 a0001c0001t0001g0086	3	251	0.0120	2	c.138 others(21): Show c.1386+9288_1386+9289dupCT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123657960	C C	CGT CGT	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03579.hp1 HG03540.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0165 a0001c0001t0001g0167	2	251	0.0080	2	c.138 others(21): Show c.1386+7680_1386+7681dupAC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123660950	G G	GTA GTA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	251	0.0040	2	c.138 others(21): Show c.1386+4690_1386+4691dupTA	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123663538	T T	TAA TAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01978.hp2 HG02027.hp1 others(29): Show HG00621.hp1 HG01978.hp2 HG02027.hp1 HG02132.hp1 HG02258.hp1 HG02293.hp2 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18955.hp1 NA18957.hp2 NA18962.hp1 NA18967.hp1 NA18971.hp1 NA18983.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18993.hp1 NA19000.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19056.hp1 NA19058.hp1 NA19063.hp1 NA19066.hp1 NA19074.hp2 NA19081.hp2 NA19082.hp1 NA19088.hp1 NA19089.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0008 a0001c0001 a0004c0008	a0001c0001t0001 a0004c0008t0001 a0001c0001t0001 a0004c0008t0001	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0014 others(29): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0106 a0001c0001t0001g0160 a0001c0001t0001g0172 a0001c0001t0001g0249 a0004c0008t0001g0084	32	251	0.1275	2	c.138 others(21): Show c.1386+2102_1386+2103dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123663538	T T	TTA TTA	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	251	0.0040	2	c.138 others(21): Show c.1386+2103_1386+2104insTA	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	12/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123677871	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	251	0.0040	2	c.769 others(19): Show c.769-6112_769-6111dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	8/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123678267	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	251	0.0040	2	c.769 others(19): Show c.769-6508_769-6507dupAA	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	8/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123693049	G G	GAC GAC	intron_variant intron_variant	MODIFIER	NA18987.hp1 NA18987.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	251	0.0040	2	c.601 others(19): Show c.601+2971_601+2972insGT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	7/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123698089	T T	TAA TAA	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	251	0.0040	2	c.275 others(17): Show c.275-340_275-339dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	4/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123700543	G G	GGT GGT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	251	0.0040	2	c.275 others(19): Show c.275-2793_275-2792insAC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	4/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123700544	T T	TGG TGG	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	251	0.0040	2	c.275 others(19): Show c.275-2795_275-2794dupCC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	4/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123700553	G G	GGT GGT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01081.hp2 HG01109.hp1 others(11): Show HG00639.hp1 HG01081.hp2 HG01109.hp1 HG01175.hp1 HG01192.hp1 HG01952.hp1 HG02145.hp1 HG02280.hp2 HG02293.hp1 HG03139.hp1 HG03688.hp1 HG04228.hp1 NA18959.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0133 a0001c0001t0001g0136 others(11): Show a0001c0001t0001g0116 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0151 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0208 a0001c0001t0001g0221 a0001c0001t0001g0232	14	251	0.0558	2	c.275 others(19): Show c.275-2803_275-2802insAC	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	4/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123701692	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0182	1	251	0.0040	2	c.274 others(19): Show c.274+1760_274+1761dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	4/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123703725	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG02083.hp1 NA18977.hp1 HG02083.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0199 a0001c0001t0001g0154 a0001c0001t0001g0199	2	251	0.0080	2	c.223 others(17): Show c.223-222_223-221dupTT	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	3/38			chrX	TogoVar
THOC2_chrX_123595569_123738052	123705820	T T	TCA TCA	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	251	0.0040	2	c.222 others(19): Show c.222+1036_222+1037dupTG	THOC2	ENSG00000125676.20	transcript	ENST00000245838.13	protein_coding	3/38			chrX	TogoVar

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