view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TSC2_chr16_2042985_2094491 | 2066651 | C | CTT | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(4): Show |
a0001a0009 | a0001c0001a0009c0055 | a0001c0001t0001a0001c0001t0003a0001c0001t0038others(1): Show | a0001c0001t0001g0217 a0001c0001t0001g0242 a0001c0001t0003g0108 others(4): Show |
7 | 318 | 0.0220 | 2 | c.171 others(21): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 16/41 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
TSC2_chr16_2042985_2094491 | 2067524 | A | ATG | intron_variant | MODIFIER | HG02109.hp2 HG02717.hp2 HG02818.hp1 others(7): Show |
a0001a0003 | a0001c0003a0003c0006 | a0001c0003t0004a0001c0003t0010a0003c0006t0037 | a0001c0003t0004g0144 a0001c0003t0004g0146 a0001c0003t0004g0147 others(7): Show |
10 | 318 | 0.0315 | 2 | c.171 others(21): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 16/41 | chr16 | TogoVar | |||||||
TSC2_chr16_2042985_2094491 | 2068872 | C | CAA | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(137): Show |
a0001a0005a0007others(6): Show | a0001c0001a0001c0002a0001c0004others(20): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 others(131): Show |
140 | 318 | 0.4403 | 2 | c.171 others(21): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 16/41 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
TSC2_chr16_2042985_2094491 | 2077040 | C | CTA | intron_variant | MODIFIER | HG00642.hp1 HG01099.hp2 HG01515.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0152 a0001c0001t0001g0183 a0001c0001t0001g0212 |
3 | 318 | 0.0094 | 2 | c.283 others(19): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 25/41 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
TSC2_chr16_2042985_2094491 | 2088872 | T | TGC | 3_prime_UTR_variant | MODIFIER | HG00621.hp1 HG01070.hp2 HG02258.hp2 others(4): Show |
a0001a0004a0010others(1): Show | a0001c0001a0004c0011a0004c0023others(2): Show | a0001c0001t0015a0004c0011t0011a0004c0023t0011others(2): Show | a0001c0001t0015g0118 a0001c0001t0015g0239 a0004c0011t0011g0026 others(4): Show |
7 | 318 | 0.0220 | 2 | c.*27 others(11): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 42/42 | 273 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
TSC2_chr16_2042985_2094491 | 2088881 | G | GCA | 3_prime_UTR_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00544.hp2 others(25): Show |
a0001a0002a0009others(1): Show | a0001c0001a0001c0051a0002c0005others(2): Show | a0001c0001t0003a0001c0001t0017a0001c0051t0003others(3): Show | a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0007 others(22): Show |
28 | 318 | 0.0881 | 2 | c.*28 others(11): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 42/42 | 290 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
TSC2_chr16_2042985_2094491 | 2091281 | C | CGA | downstream_gene_variant | MODIFIER | HG02965.hp2 HG03139.hp2 HG03453.hp2 |
a0007a0019 | a0007c0013a0019c0028 | a0007c0013t0010a0019c0028t0010 | a0007c0013t0010g0137 a0007c0013t0010g0139 a0019c0028t0010g0138 |
3 | 318 | 0.0094 | 2 | c.*26 others(13): Show |
TSC2 | ENSG00000103197.19 | transcript | ENST00000219476.9 | protein_coding | 1791 | chr16 | TogoVar | |||||||
TSEN15_chr1_184046730_184079212 | 184048674 | C | CTT | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(319): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(14): Show | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 others(150): Show |
322 | 422 | 0.7630 | 2 | c.-30 others(13): Show |
TSEN15 | ENSG00000198860.14 | transcript | ENST00000645668.2 | protein_coding | 3055 | chr1 | TogoVar | |||||||
TSEN15_chr1_184046730_184079212 | 184065183 | T | TAC | intron_variant | MODIFIER | HG00280.hp2 HG00609.hp2 HG00735.hp1 others(81): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 others(37): Show |
84 | 422 | 0.1991 | 2 | c.354 others(19): Show |
TSEN15 | ENSG00000198860.14 | transcript | ENST00000645668.2 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TSEN15_chr1_184046730_184079212 | 184075892 | T | TTA | downstream_gene_variant | MODIFIER | HG02004.hp1 HG02615.hp2 HG02622.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0037 others(5): Show |
9 | 422 | 0.0213 | 2 | c.*30 others(13): Show |
TSEN15 | ENSG00000198860.14 | transcript | ENST00000645668.2 | protein_coding | 1681 | chr1 | TogoVar | |||||||
TSEN2_chr3_12479480_12538658 | 12480528 | G | GTT | upstream_gene_variant | MODIFIER | HG01081.hp1 HG01123.hp1 HG01123.hp2 others(18): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0200 a0001c0001t0002g0058 a0001c0001t0002g0099 others(18): Show |
21 | 284 | 0.0739 | 2 | c.-43 others(13): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 3951 | chr3 | TogoVar | |||||||
TSEN2_chr3_12479480_12538658 | 12481897 | A | ATG | upstream_gene_variant | MODIFIER | HG00673.hp2 HG02257.hp1 HG03471.hp1 others(2): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0169 a0001c0001t0004g0042 others(2): Show |
5 | 284 | 0.0176 | 2 | c.-30 others(13): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 2582 | chr3 | TogoVar | |||||||
TSEN2_chr3_12479480_12538658 | 12481923 | G | GTA | upstream_gene_variant | MODIFIER | HG00621.hp1 HG00621.hp2 HG01081.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0004 | a0001c0001t0001g0001 a0001c0001t0001g0173 a0001c0001t0001g0190 others(7): Show |
11 | 284 | 0.0387 | 2 | c.-29 others(13): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 2556 | chr3 | TogoVar | |||||||
TSEN2_chr3_12479480_12538658 | 12481926 | T | TGC | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01167.hp2 others(6): Show |
a0001 | a0001c0005 | a0001c0005t0003 | a0001c0005t0003g0004 a0001c0005t0003g0023 a0001c0005t0003g0232 others(1): Show |
9 | 284 | 0.0317 | 2 | c.-29 others(13): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 2553 | chr3 | TogoVar | |||||||
TSEN2_chr3_12479480_12538658 | 12505783 | C | CAA | intron_variant | MODIFIER | HG01175.hp1 HG02280.hp2 HG03669.hp1 others(8): Show |
a0001 | a0001c0001a0001c0007a0001c0010 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(3): Show | a0001c0001t0001g0007 a0001c0001t0001g0162 a0001c0001t0001g0163 others(6): Show |
11 | 284 | 0.0387 | 2 | c.909 others(17): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12511569 | C | CTT | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00639.hp1 others(23): Show |
a0001a0002 | a0001c0001a0002c0003a0002c0004 | a0001c0001t0002a0001c0001t0005a0001c0001t0006others(2): Show | a0001c0001t0002g0014 a0001c0001t0002g0021 a0001c0001t0002g0059 others(20): Show |
26 | 284 | 0.0916 | 2 | c.910 others(19): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12516442 | A | ATG | intron_variant | MODIFIER | HG01081.hp2 HG01123.hp2 HG02109.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0005 | a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0103 others(4): Show |
7 | 284 | 0.0247 | 2 | c.910 others(17): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12523526 | C | CTT | intron_variant | MODIFIER | HG01074.hp2 HG01099.hp1 HG01243.hp2 others(24): Show |
a0002a0004 | a0002c0003a0002c0004a0002c0006others(1): Show | a0002c0003t0002a0002c0004t0001a0002c0004t0007others(3): Show | a0002c0003t0002g0008 a0002c0003t0002g0009 a0002c0003t0002g0024 others(21): Show |
27 | 284 | 0.0951 | 2 | c.109 others(21): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12524739 | C | CTT | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(116): Show |
a0001a0002 | a0001c0001a0001c0008a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(10): Show | a0001c0001t0001g0182 a0001c0001t0002g0002 a0001c0001t0002g0011 others(103): Show |
119 | 284 | 0.4190 | 2 | c.110 others(21): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12529465 | C | CAA | intron_variant | MODIFIER | HG01346.hp1 HG01361.hp2 HG02886.hp2 others(5): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0001c0001t0006a0001c0001t0015others(2): Show | a0001c0001t0002g0048 a0001c0001t0002g0062 a0001c0001t0002g0078 others(5): Show |
8 | 284 | 0.0282 | 2 | c.113 others(19): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TSEN2_chr3_12479480_12538658 | 12533659 | C | CAA | downstream_gene_variant | MODIFIER | HG01261.hp1 HG02145.hp1 HG02280.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0007a0002c0003 | a0001c0001t0004a0001c0007t0004a0002c0003t0004 | a0001c0001t0004g0045 a0001c0001t0004g0110 a0001c0007t0004g0044 others(3): Show |
6 | 284 | 0.0211 | 2 | c.*93 others(11): Show |
TSEN2 | ENSG00000154743.19 | transcript | ENST00000284995.11 | protein_coding | 2 | chr3 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54195956 | G | GTT | downstream_gene_variant | MODIFIER | HG00741.hp1 HG01099.hp2 HG01168.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0026 others(7): Show |
13 | 431 | 0.0302 | 2 | c.*25 others(13): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 1425 | chr19 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54195966 | T | TTG | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00438.hp2 others(81): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(14): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0018 others(23): Show |
84 | 431 | 0.1949 | 2 | c.*26 others(13): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 1435 | chr19 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54197713 | C | CTT | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(138): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(17): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0003g0004 others(27): Show |
141 | 431 | 0.3272 | 2 | c.*43 others(13): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 3182 | chr19 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54198483 | A | ATT | downstream_gene_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00438.hp1 others(68): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(12): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0032 others(19): Show |
71 | 431 | 0.1647 | 2 | c.*51 others(13): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 3952 | chr19 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54198903 | C | CTT | downstream_gene_variant | MODIFIER | HG00741.hp1 HG02071.hp2 NA18612.hp2 others(15): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(4): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0003g0004 others(5): Show |
18 | 431 | 0.0418 | 2 | c.*55 others(13): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 4372 | chr19 | TogoVar | |||||||
TSEN54_chr17_75511528_75529735 | 75512899 | C | CAA | upstream_gene_variant | MODIFIER | HG02109.hp2 HG02258.hp2 HG02717.hp1 others(9): Show |
a0001a0007a0010 | a0001c0001a0007c0006a0010c0010 | a0001c0001t0001a0007c0006t0001a0010c0010t0001 | a0001c0001t0001g0001 a0007c0006t0001g0009 a0007c0006t0001g0037 others(2): Show |
12 | 424 | 0.0283 | 2 | c.-36 others(13): Show |
TSEN54 | ENSG00000182173.14 | transcript | ENST00000333213.11 | protein_coding | 3628 | chr17 | TogoVar | |||||||
TSEN54_chr17_75511528_75529735 | 75520954 | C | CAA | intron_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG03927.hp1 others(5): Show |
a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0012 a0010c0010t0001g0020 a0010c0010t0001g0043 |
8 | 424 | 0.0189 | 2 | c.522 others(17): Show |
TSEN54 | ENSG00000182173.14 | transcript | ENST00000333213.11 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TSEN54_chr17_75511528_75529735 | 75527167 | C | CAA | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(167): Show |
a0001a0002a0005others(9): Show | a0001c0001a0001c0014a0001c0015others(11): Show | a0001c0001t0001a0001c0014t0001a0001c0015t0001others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0015 others(33): Show |
170 | 424 | 0.4009 | 2 | c.*27 others(13): Show |
TSEN54 | ENSG00000182173.14 | transcript | ENST00000333213.11 | protein_coding | 2433 | chr17 | TogoVar | |||||||
TSEN54_chr17_75511528_75529735 | 75529147 | C | CTT | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(309): Show |
a0001a0002a0003others(19): Show | a0001c0001a0001c0014a0001c0015others(24): Show | a0001c0001t0001a0001c0014t0001a0001c0015t0001others(26): Show | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0015 others(80): Show |
312 | 424 | 0.7359 | 2 | c.*47 others(13): Show |
TSEN54 | ENSG00000182173.14 | transcript | ENST00000333213.11 | protein_coding | 4413 | chr17 | TogoVar | |||||||
TSFM_chr12_57777787_57802587 | 57778019 | C | CAA | upstream_gene_variant | MODIFIER | HG00639.hp1 HG00639.hp2 HG01074.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0006 others(2): Show |
6 | 368 | 0.0163 | 2 | c.-47 others(13): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 4767 | chr12 | TogoVar | |||||||
TSFM_chr12_57777787_57802587 | 57779665 | C | CCT | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp1 others(136): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0008others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0003others(5): Show | a0001c0001t0001g0122 a0001c0002t0001g0001 a0001c0002t0001g0003 others(49): Show |
139 | 368 | 0.3777 | 2 | c.-31 others(13): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 3121 | chr12 | TogoVar | |||||||
TSFM_chr12_57777787_57802587 | 57784916 | C | CTT | intron_variant | MODIFIER | HG01109.hp1 HG01123.hp1 HG01891.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0052 a0001c0001t0001g0134 a0001c0001t0001g0135 others(1): Show |
6 | 368 | 0.0163 | 2 | c.232 others(19): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TSFM_chr12_57777787_57802587 | 57790060 | C | CTT | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp1 HG00642.hp1 others(25): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0004a0002c0003t0001 | a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0017 others(11): Show |
28 | 368 | 0.0761 | 2 | c.484 others(19): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TSFM_chr12_57777787_57802587 | 57795072 | C | CAT | intron_variant | MODIFIER | HG02055.hp1 HG02559.hp2 HG02647.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0047 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
6 | 368 | 0.0163 | 2 | c.572 others(19): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TSFM_chr12_57777787_57802587 | 57795089 | G | GTA | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG02109.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0100 others(1): Show |
6 | 368 | 0.0163 | 2 | c.572 others(19): Show |
TSFM | ENSG00000123297.20 | transcript | ENST00000652027.2 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TSG101_chr11_18475311_18531942 | 18477452 | T | TAA | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00423.hp1 others(55): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0096 others(55): Show |
58 | 406 | 0.1429 | 2 | c.*30 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 2858 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18479533 | G | GTA | downstream_gene_variant | MODIFIER | HG02717.hp2 HG02818.hp2 HG03041.hp1 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0355 a0001c0001t0001g0356 a0001c0001t0001g0363 others(2): Show |
5 | 406 | 0.0123 | 2 | c.*10 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 777 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18479542 | T | TAC | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00423.hp1 others(52): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0096 others(52): Show |
55 | 406 | 0.1355 | 2 | c.*10 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 768 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18483027 | C | CGT | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp2 HG00558.hp2 others(33): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0017 a0001c0001t0001g0018 others(32): Show |
36 | 406 | 0.0887 | 2 | c.843 others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 8/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18484935 | C | CTT | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp1 HG01243.hp2 others(28): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0002c0004t0001a0002c0004t0003 | a0001c0001t0001g0024 a0001c0001t0001g0035 a0001c0001t0001g0041 others(28): Show |
31 | 406 | 0.0764 | 2 | c.641 others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18495923 | C | CAA | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00423.hp1 others(49): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0096 others(49): Show |
52 | 406 | 0.1281 | 2 | c.640 others(19): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18503370 | A | ATT | intron_variant | MODIFIER | HG00738.hp1 HG01515.hp2 HG02273.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 others(18): Show |
21 | 406 | 0.0517 | 2 | c.549 others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 6/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18512723 | A | ATT | intron_variant | MODIFIER | HG02257.hp2 HG02258.hp2 HG02723.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0032 a0001c0001t0001g0090 a0001c0001t0001g0246 others(9): Show |
12 | 406 | 0.0296 | 2 | c.357 others(19): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 4/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18521359 | C | CTT | intron_variant | MODIFIER | HG00544.hp2 HG00642.hp2 HG01928.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0113 a0001c0001t0001g0164 a0001c0001t0001g0213 others(16): Show |
19 | 406 | 0.0468 | 2 | c.43- others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18521670 | C | CTT | intron_variant | MODIFIER | HG01071.hp2 HG01081.hp1 HG01168.hp1 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010 a0001c0001t0001g0099 a0001c0001t0001g0217 others(18): Show |
22 | 406 | 0.0542 | 2 | c.43- others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18525540 | T | TAA | intron_variant | MODIFIER | HG02895.hp2 HG02896.hp1 HG02965.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0365 others(3): Show |
6 | 406 | 0.0148 | 2 | c.42+ others(17): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18527999 | C | CTT | upstream_gene_variant | MODIFIER | HG01167.hp2 HG01169.hp1 HG02630.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0062 others(5): Show |
8 | 406 | 0.0197 | 2 | c.-11 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1058 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18528375 | A | ATT | upstream_gene_variant | MODIFIER | HG02109.hp2 HG02647.hp1 HG02886.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0033 a0001c0001t0001g0054 a0001c0001t0001g0244 others(1): Show |
4 | 406 | 0.0099 | 2 | c.-15 others(13): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 1434 | chr11 | TogoVar | |||||||
TSGA10IP_chr11_65940480_65964966 | 65940873 | C | CAA | upstream_gene_variant | MODIFIER | HG02622.hp1 HG02622.hp2 HG04199.hp2 others(5): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0001a0003c0003t0001 | a0001c0001t0001g0006 a0001c0001t0001g0178 a0002c0002t0001g0002 others(5): Show |
8 | 392 | 0.0204 | 2 | c.-48 others(13): Show |
TSGA10IP | ENSG00000175513.10 | transcript | ENST00000532620.6 | protein_coding | 4606 | chr11 | TogoVar |