Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
XPA_chr9_97669909_97702340	97689784	T T	TTA TTA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00609.hp2 HG01099.hp2 others(29): Show HG00597.hp1 HG00609.hp2 HG01099.hp2 HG01123.hp1 HG01167.hp2 HG01192.hp2 HG01934.hp1 HG01943.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02148.hp1 HG02155.hp1 HG02273.hp2 HG02523.hp2 HG03239.hp2 NA18947.hp1 NA18962.hp2 NA18966.hp2 NA18968.hp1 NA18970.hp2 NA18975.hp2 NA18977.hp1 NA18989.hp1 NA19002.hp1 NA19004.hp2 NA19006.hp1 NA19055.hp2 NA19063.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0004 a0001c0001t0003g0009 a0001c0001t0003g0046 others(3): Show a0001c0001t0003g0004 a0001c0001t0003g0009 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0121 a0001c0001t0003g0125	32	414	0.0773	2	c.284 others(17): Show c.284-146_284-145insTA		XPA	ENSG00000136936.11	transcript	ENST00000375128.5	protein_coding	2/5						chr9	TogoVar
XPA_chr9_97669909_97702340	97691886	A A	AAT AAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00621.hp1 HG00733.hp1 others(25): Show HG00140.hp2 HG00621.hp1 HG00733.hp1 HG01433.hp1 HG02027.hp2 HG02071.hp2 HG02300.hp1 HG02559.hp1 HG02738.hp2 HG02965.hp1 HG03491.hp2 HG03942.hp2 HG04204.hp1 NA18940.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18995.hp1 NA19058.hp2 NA19066.hp1 NA19074.hp1 NA19076.hp2 NA19079.hp2 NA19085.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0035 others(10): Show a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0062 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0097 a0001c0001t0002g0025 a0001c0001t0002g0127 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140	28	414	0.0676	2	c.283 others(19): Show c.283+1761_283+1762dupAT		XPA	ENSG00000136936.11	transcript	ENST00000375128.5	protein_coding	2/5						chr9	TogoVar
XPC_chr3_14140147_14183601	14143724	A A	ATT ATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00735.hp1 others(58): Show HG00099.hp2 HG00280.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01074.hp1 HG01106.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp1 HG01346.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG02004.hp2 HG02055.hp2 HG02071.hp1 HG02258.hp2 HG02273.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18982.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19062.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0006 a0008 a0015	a0001c0003 a0001c0006 a0002c0018 others(4): Show a0001c0003 a0001c0006 a0002c0018 a0004c0004 a0006c0009 a0008c0014 a0015c0021	a0001c0003t0003 a0001c0006t0001 a0002c0018t0003 others(4): Show a0001c0003t0003 a0001c0006t0001 a0002c0018t0003 a0004c0004t0001 a0006c0009t0003 a0008c0014t0003 a0015c0021t0003	a0001c0003t0003g0003 a0001c0003t0003g0009 a0001c0003t0003g0010 others(29): Show a0001c0003t0003g0003 a0001c0003t0003g0009 a0001c0003t0003g0010 a0001c0003t0003g0020 a0001c0003t0003g0062 a0001c0003t0003g0064 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0003g0067 a0001c0003t0003g0068 a0001c0003t0003g0069 a0001c0003t0003g0070 a0001c0003t0003g0072 a0001c0003t0003g0073 a0001c0003t0003g0075 a0001c0003t0003g0077 a0001c0003t0003g0078 a0001c0003t0003g0079 a0001c0003t0003g0080 a0001c0003t0003g0081 a0001c0003t0003g0082 a0001c0003t0003g0083 a0001c0003t0003g0087 a0001c0003t0003g0091 a0001c0006t0001g0029 a0001c0006t0001g0050 a0001c0006t0001g0159 a0002c0018t0003g0085 a0004c0004t0001g0004 a0006c0009t0003g0088 a0008c0014t0003g0038 a0015c0021t0003g0071	61	374	0.1631	2	c.22 others(13): Show c.2216_*2217insAA		XPC	ENSG00000154767.15	transcript	ENST00000285021.12	protein_coding					1422		chr3	TogoVar
XPC_chr3_14140147_14183601	14145107	T T	TAA TAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG02055.hp1 HG02109.hp1 others(5): Show HG01081.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02717.hp2 HG02809.hp1 HG02970.hp1 HG03098.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0002 a0001c0003 a0003c0002	a0001c0003t0003 a0003c0002t0002 a0001c0003t0003 a0003c0002t0002	a0001c0003t0003g0015 a0003c0002t0002g0011 a0003c0002t0002g0107 others(1): Show a0001c0003t0003g0015 a0003c0002t0002g0011 a0003c0002t0002g0107 a0003c0002t0002g0108	8	374	0.0214	2	c.83 others(11): Show c.833_*834insTT		XPC	ENSG00000154767.15	transcript	ENST00000285021.12	protein_coding					39		chr3	TogoVar
XPC_chr3_14140147_14183601	14180821	C C	CTT CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG01109.hp1 others(6): Show HG00423.hp2 HG00621.hp1 HG01109.hp1 HG03516.hp1 NA18951.hp2 NA18977.hp2 NA19007.hp2 NA19012.hp1 NA19083.hp1	a0002 a0003 a0002 a0003	a0002c0001 a0003c0002 a0002c0001 a0003c0002	a0002c0001t0001 a0002c0001t0002 a0003c0002t0002 a0002c0001t0001 a0002c0001t0002 a0003c0002t0002	a0002c0001t0001g0018 a0002c0001t0001g0154 a0002c0001t0002g0145 others(5): Show a0002c0001t0001g0018 a0002c0001t0001g0154 a0002c0001t0002g0145 a0003c0002t0002g0012 a0003c0002t0002g0016 a0003c0002t0002g0041 a0003c0002t0002g0095 a0003c0002t0002g0125	9	374	0.0241	2	c.-22 others(13): Show c.-2255_-2254dupAA		XPC	ENSG00000154767.15	transcript	ENST00000285021.12	protein_coding					2221		chr3	TogoVar
XPNPEP1_chr10_109859766_109928511	109890550	T T	TTG TTG	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01243.hp2 HG01496.hp1 others(29): Show HG00609.hp1 HG01243.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG02055.hp1 HG02071.hp1 HG02258.hp2 HG02486.hp1 HG02523.hp2 HG02630.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03540.hp2 HG04115.hp1 NA18960.hp2 NA18975.hp1 NA18978.hp1 NA18990.hp1 NA18998.hp2 NA19010.hp2 NA19043.hp1 NA19066.hp1 NA19070.hp1 NA19074.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0010 a0001c0001 a0003c0010	a0001c0001t0001 a0003c0010t0001 a0001c0001t0001 a0003c0010t0001	a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0021 others(25): Show a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0001t0001g0086 a0001c0001t0001g0110 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0132 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0239 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0286 a0001c0001t0001g0289 a0003c0010t0001g0183	32	344	0.0930	2	c.415 others(19): Show c.415+1170_415+1171dupCA		XPNPEP1	ENSG00000108039.18	transcript	ENST00000502935.6	protein_coding	5/20						chr10	TogoVar
XPNPEP1_chr10_109859766_109928511	109896433	C C	CTT CTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00423.hp2 others(24): Show HG00280.hp2 HG00423.hp1 HG00423.hp2 HG01109.hp1 HG01361.hp2 HG01496.hp2 HG01891.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp1 HG02129.hp2 HG02622.hp1 HG02630.hp2 HG03098.hp1 HG03486.hp1 HG03516.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 NA18946.hp2 NA18962.hp2 NA18979.hp2 NA18980.hp1 NA18995.hp2 NA19065.hp2 NA19072.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0008t0001 a0001c0001t0001 a0001c0001t0002 a0001c0008t0001	a0001c0001t0001g0022 a0001c0001t0001g0065 a0001c0001t0001g0092 others(23): Show a0001c0001t0001g0022 a0001c0001t0001g0065 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0160 a0001c0001t0001g0177 a0001c0001t0001g0186 a0001c0001t0001g0194 a0001c0001t0001g0205 a0001c0001t0001g0211 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0230 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0293 a0001c0001t0002g0070 a0001c0001t0002g0118 a0001c0001t0002g0294 a0001c0008t0001g0105	27	344	0.0785	2	c.247 others(19): Show c.247-3360_247-3359dupAA		XPNPEP1	ENSG00000108039.18	transcript	ENST00000502935.6	protein_coding	3/20						chr10	TogoVar
XPNPEP1_chr10_109859766_109928511	109903860	T T	TTC TTC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02258.hp2 HG02630.hp2 others(7): Show HG02109.hp1 HG02258.hp2 HG02630.hp2 HG02723.hp2 HG02897.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03516.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0194 a0001c0001t0001g0195 others(6): Show a0001c0001t0001g0021 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0237 a0001c0001t0001g0239 a0001c0001t0001g0277 a0001c0001t0001g0278	10	344	0.0291	2	c.246 others(19): Show c.246+3830_246+3831insGA		XPNPEP1	ENSG00000108039.18	transcript	ENST00000502935.6	protein_coding	3/20						chr10	TogoVar
XPNPEP1_chr10_109859766_109928511	109914797	C C	CAA CAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00423.hp2 others(108): Show HG00099.hp1 HG00280.hp2 HG00423.hp2 HG00597.hp1 HG00738.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01175.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp1 HG01993.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02300.hp1 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02896.hp1 HG02897.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03239.hp1 HG03239.hp2 HG03540.hp2 HG03710.hp1 HG04184.hp1 HG04204.hp1 HG06807.hp2 NA18747.hp1 NA18942.hp2 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18951.hp1 NA18953.hp2 NA18957.hp2 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp2 NA18970.hp1 NA18971.hp1 NA18977.hp1 NA18978.hp2 NA18980.hp1 NA18981.hp2 NA18983.hp1 NA18984.hp2 NA18993.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19002.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19011.hp2 NA19030.hp2 NA19054.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp2 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19068.hp2 NA19072.hp2 NA19076.hp2 NA19079.hp2 NA19082.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp2 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0007 a0004c0006 a0001c0001 a0001c0007 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0007t0001 a0004c0006t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0017 others(93): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0034 a0001c0001t0001g0083 a0001c0001t0001g0090 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0245 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0291 a0001c0001t0001g0293 a0001c0001t0001g0304 a0001c0001t0002g0023 a0001c0001t0002g0196 a0001c0001t0002g0229 a0001c0001t0002g0244 a0001c0001t0002g0261 a0001c0001t0002g0267 a0001c0001t0002g0279 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0003g0123 a0001c0001t0004g0266 a0001c0007t0001g0269 a0004c0006t0001g0265	111	344	0.3227	2	c.121 others(17): Show c.121+212_121+213dupTT		XPNPEP1	ENSG00000108039.18	transcript	ENST00000502935.6	protein_coding	2/20						chr10	TogoVar
XPNPEP2_chrX_129733979_129774536	129734363	C C	CAA CAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01496.hp1 HG02258.hp1 HG02717.hp1 others(7): Show HG01496.hp1 HG02258.hp1 HG02717.hp1 HG02886.hp2 HG02965.hp1 HG02976.hp2 HG03209.hp1 HG03516.hp2 NA19030.hp2 NA19240.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0022 a0004c0005t0007	a0001c0001t0002g0056 a0001c0001t0003g0114 a0001c0001t0007g0284 others(7): Show a0001c0001t0002g0056 a0001c0001t0003g0114 a0001c0001t0007g0284 a0001c0001t0007g0285 a0001c0001t0007g0288 a0001c0001t0007g0290 a0001c0001t0011g0307 a0001c0001t0022g0291 a0004c0005t0007g0287 a0004c0005t0007g0289	10	310	0.0323	2	c.-48 others(13): Show c.-4851_-4850insAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding					4615		chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129734845	T T	TAC TAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00423.hp1 HG00639.hp1 others(49): Show HG00280.hp1 HG00423.hp1 HG00639.hp1 HG00639.hp2 HG00735.hp2 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01258.hp1 HG01346.hp2 HG01496.hp2 HG01884.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG02004.hp1 HG02015.hp1 HG02109.hp2 HG02135.hp1 HG02148.hp1 HG02293.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp2 HG02698.hp1 HG02809.hp2 HG03017.hp1 HG03130.hp1 HG03239.hp1 HG03516.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 NA18954.hp2 NA18955.hp1 NA18964.hp2 NA18978.hp2 NA18997.hp1 NA19002.hp1 NA19012.hp1 NA19057.hp2 NA19064.hp1 NA19064.hp2 NA19070.hp1 NA19081.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0002t0001	a0001c0001t0001g0086 a0001c0001t0001g0115 a0001c0001t0001g0143 others(49): Show a0001c0001t0001g0086 a0001c0001t0001g0115 a0001c0001t0001g0143 a0001c0001t0001g0277 a0001c0001t0001g0279 a0001c0001t0002g0022 a0001c0001t0002g0094 a0001c0001t0002g0131 a0001c0001t0002g0165 a0001c0001t0002g0223 a0001c0001t0002g0303 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0070 a0001c0001t0003g0077 a0001c0001t0003g0175 a0001c0001t0003g0190 a0001c0001t0004g0025 a0001c0001t0004g0076 a0001c0001t0004g0148 a0001c0001t0005g0005 a0001c0001t0005g0006 a0001c0001t0005g0186 a0001c0001t0005g0203 a0001c0001t0006g0189 a0001c0001t0012g0241 a0001c0002t0001g0083 a0001c0002t0001g0215 a0001c0002t0001g0220 a0001c0002t0001g0221 a0001c0002t0001g0222 a0001c0002t0001g0228 a0001c0002t0001g0233 a0001c0002t0001g0236 a0001c0002t0001g0243 a0001c0002t0001g0245 a0001c0002t0001g0252 a0001c0002t0001g0253 a0001c0002t0001g0254 a0001c0002t0001g0255 a0001c0002t0001g0256 a0001c0002t0001g0260 a0001c0002t0001g0263 a0001c0002t0001g0265 a0001c0002t0001g0266 a0001c0002t0001g0267 a0001c0002t0001g0268 a0001c0002t0001g0269 a0001c0002t0001g0270 a0001c0002t0001g0272 a0001c0002t0001g0273 a0001c0002t0001g0299	52	310	0.1677	2	c.-43 others(13): Show c.-4369_-4368insAC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding					4133		chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129737721	A A	AGG AGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.-14 others(13): Show c.-1493_-1492insGG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding					1257		chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129738884	G G	GGC GGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.-33 others(11): Show c.-330_-329insGC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding					94		chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129739180	C C	CAT CAT	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.-34 others(9): Show c.-34_-33insAT		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/21				33		chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129740628	C C	CAA CAA	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0185 a0001c0001t0006g0185	1	310	0.0032	2	c.49+ others(17): Show c.49+1379_49+1380dupAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129740901	C C	CCA CCA	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.50- others(17): Show c.50-1207_50-1206insCA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129740908	C C	CCT CCT	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.50- others(17): Show c.50-1200_50-1199insCT		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129740956	A A	AGG AGG	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02074.hp1 HG02965.hp1 others(7): Show HG00597.hp2 HG02074.hp1 HG02965.hp1 HG03831.hp2 NA18522.hp1 NA18939.hp1 NA18981.hp1 NA18994.hp1 NA19056.hp1 NA19067.hp1	a0001 a0015 a0028 a0001 a0015 a0028	a0001c0001 a0001c0002 a0015c0012 others(1): Show a0001c0001 a0001c0002 a0015c0012 a0028c0030	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0022 a0001c0002t0001 a0015c0012t0004 a0028c0030t0001	a0001c0001t0002g0176 a0001c0001t0003g0082 a0001c0001t0004g0080 others(7): Show a0001c0001t0002g0176 a0001c0001t0003g0082 a0001c0001t0004g0080 a0001c0001t0009g0081 a0001c0001t0010g0177 a0001c0001t0022g0291 a0001c0002t0001g0078 a0001c0002t0001g0083 a0015c0012t0004g0079 a0028c0030t0001g0178	10	310	0.0323	2	c.50- others(17): Show c.50-1146_50-1145dupGG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129740965	G G	GGC GGC	intron_variant intron_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0011 a0011	a0011c0019 a0011c0019	a0011c0019t0001 a0011c0019t0001	a0011c0019t0001g0089 a0011c0019t0001g0089	1	310	0.0032	2	c.50- others(17): Show c.50-1142_50-1141insCG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129741172	T T	TGG TGG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00423.hp2 others(119): Show HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG01069.hp1 HG01071.hp1 HG01175.hp1 HG01261.hp1 HG01346.hp1 HG01496.hp1 HG01891.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp2 HG02004.hp2 HG02040.hp1 HG02056.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02523.hp1 HG02523.hp2 HG02615.hp2 HG02735.hp1 HG02738.hp1 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03239.hp2 HG03486.hp2 HG03654.hp1 HG03710.hp1 HG03942.hp1 HG04115.hp1 HG04204.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18945.hp1 NA18947.hp1 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18972.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18987.hp1 NA18987.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19056.hp1 NA19059.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19074.hp1 NA19075.hp1 NA19076.hp1 NA19081.hp2 NA19082.hp1 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20905.hp1 NA21309.hp2	a0001 a0003 a0010 others(9): Show a0001 a0003 a0010 a0011 a0016 a0019 a0020 a0022 a0025 a0026 a0027 a0028	a0001c0001 a0001c0002 a0001c0006 others(11): Show a0001c0001 a0001c0002 a0001c0006 a0003c0004 a0010c0021 a0011c0019 a0016c0027 a0019c0015 a0020c0014 a0022c0016 a0025c0011 a0026c0023 a0027c0007 a0028c0030	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0003c0004t0006 a0010c0021t0004 a0011c0019t0001 a0016c0027t0001 a0019c0015t0002 a0020c0014t0004 a0022c0016t0001 a0025c0011t0014 a0026c0023t0003 a0027c0007t0020 a0028c0030t0001	a0001c0001t0001g0053 a0001c0001t0001g0062 a0001c0001t0001g0086 others(119): Show a0001c0001t0001g0053 a0001c0001t0001g0062 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0136 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0064 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0111 a0001c0001t0002g0129 a0001c0001t0002g0131 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0158 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0303 a0001c0001t0003g0021 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0090 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0112 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0132 a0001c0001t0003g0147 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0004g0025 a0001c0001t0004g0061 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0148 a0001c0001t0004g0149 a0001c0001t0004g0173 a0001c0001t0004g0305 a0001c0001t0005g0153 a0001c0001t0006g0125 a0001c0001t0009g0293 a0001c0001t0010g0142 a0001c0001t0010g0163 a0001c0001t0010g0177 a0001c0001t0012g0162 a0001c0001t0012g0167 a0001c0001t0015g0150 a0001c0002t0001g0017 a0001c0002t0001g0031 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0063 a0001c0002t0001g0078 a0001c0002t0001g0097 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0133 a0001c0002t0001g0141 a0001c0002t0001g0154 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0297 a0001c0002t0002g0029 a0001c0006t0001g0110 a0003c0004t0006g0088 a0003c0004t0006g0130 a0010c0021t0004g0140 a0011c0019t0001g0089 a0016c0027t0001g0182 a0019c0015t0002g0016 a0020c0014t0004g0030 a0022c0016t0001g0117 a0025c0011t0014g0008 a0026c0023t0003g0001 a0027c0007t0020g0015 a0028c0030t0001g0178	122	310	0.3936	2	c.50- others(15): Show c.50-928_50-927dupGG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	1/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129742128	A A	AAG AAG	frameshift_variant frameshift_variant	HIGH	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.71_ others(7): Show c.71_72dupAG	p.Pro others(4): Show p.Pro25fs	XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/21	308/3311	73/2025	25/674		INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129742195	G G	GCC GCC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.123 others(15): Show c.123+19_123+20dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129742273	C C	CCG CCG	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.123 others(15): Show c.123+93_123+94insGC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129742333	G G	GGC GGC	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0026 a0026	a0026c0023 a0026c0023	a0026c0023t0003 a0026c0023t0003	a0026c0023t0003g0001 a0026c0023t0003g0001	1	310	0.0032	2	c.123 others(17): Show c.123+153_123+154dupGC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129743600	A A	ACC ACC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.124 others(17): Show c.124-357_124-356dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129743835	T T	TCC TCC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.124 others(17): Show c.124-122_124-121dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129743900	T T	TCC TCC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.124 others(15): Show c.124-61_124-60insCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	2/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129744531	A A	ACC ACC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0025 a0005c0032t0025	a0005c0032t0025g0002 a0005c0032t0025g0002	1	310	0.0032	2	c.234 others(17): Show c.234+461_234+462dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	3/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751104	A A	ACC ACC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01169.hp2 HG01175.hp2 others(3): Show HG01109.hp1 HG01169.hp2 HG01175.hp2 HG02559.hp2 HG02897.hp1 HG03669.hp2	a0001 a0024 a0001 a0024	a0001c0001 a0001c0002 a0024c0026 a0001c0001 a0001c0002 a0024c0026	a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 a0001c0002t0019 a0024c0026t0001	a0001c0001t0002g0211 a0001c0001t0005g0247 a0001c0002t0001g0225 others(3): Show a0001c0001t0002g0211 a0001c0001t0005g0247 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0019g0244 a0024c0026t0001g0301	6	310	0.0194	2	c.739 others(17): Show c.739+546_739+547dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751113	C C	CCA CCA	intron_variant intron_variant	MODIFIER	HG00597.hp2 NA19075.hp1 HG00597.hp2 NA19075.hp1	a0001 a0026 a0001 a0026	a0001c0001 a0026c0023 a0001c0001 a0026c0023	a0001c0001t0003 a0026c0023t0003 a0001c0001t0003 a0026c0023t0003	a0001c0001t0003g0082 a0026c0023t0003g0001 a0001c0001t0003g0082 a0026c0023t0003g0001	2	310	0.0065	2	c.739 others(17): Show c.739+545_739+546insAC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751452	G G	GGT GGT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0106 a0001c0002t0001g0106	1	310	0.0032	2	c.740 others(17): Show c.740-293_740-292insGT		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751534	G G	GAA GAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0255 a0001c0002t0001g0255	1	310	0.0032	2	c.740 others(17): Show c.740-211_740-210insAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751539	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0242 a0001c0002t0001g0242	1	310	0.0032	2	c.740 others(17): Show c.740-205_740-204insGA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751587	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0003 a0008c0008t0003	a0008c0008t0003g0085 a0008c0008t0003g0085	1	310	0.0032	2	c.740 others(17): Show c.740-157_740-156insGA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751591	A A	AAG AAG	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0070 a0001c0001t0003g0070	1	310	0.0032	2	c.740 others(17): Show c.740-153_740-152insGA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751595	A A	AAG AAG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02080.hp1 HG00735.hp2 HG02080.hp1	a0001 a0007 a0001 a0007	a0001c0002 a0007c0022 a0001c0002 a0007c0022	a0001c0002t0001 a0007c0022t0003 a0001c0002t0001 a0007c0022t0003	a0001c0002t0001g0255 a0007c0022t0003g0181 a0001c0002t0001g0255 a0007c0022t0003g0181	2	310	0.0065	2	c.740 others(17): Show c.740-149_740-148insGA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751640	A A	AGG AGG	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0003 a0008c0008t0003	a0008c0008t0003g0085 a0008c0008t0003g0085	1	310	0.0032	2	c.740 others(17): Show c.740-105_740-104insGG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20						chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129751656	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0106 a0001c0002t0001g0106	1	310	0.0032	2	c.740 others(15): Show c.740-88_740-87dupAG		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	8/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129754215	A A	ACC ACC	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0017 a0017	a0017c0013 a0017c0013	a0017c0013t0003 a0017c0013t0003	a0017c0013t0003g0069 a0017c0013t0003g0069	1	310	0.0032	2	c.110 others(19): Show c.1108-253_1108-252dupCC		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	11/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129756526	G G	GTA GTA	frameshift_variant frameshift_variant	HIGH	NA19082.hp1 NA19082.hp1	a0022 a0022	a0022c0016 a0022c0016	a0022c0016t0001 a0022c0016t0001	a0022c0016t0001g0117 a0022c0016t0001g0117	1	310	0.0032	2	c.133 others(11): Show c.1339_1340dupTA	p.Leu others(5): Show p.Leu448fs	XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/21	1576/3311	1341/2025	447/674		INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129756996	C C	CTA CTA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00741.hp2 HG01109.hp1 others(24): Show HG00597.hp1 HG00741.hp2 HG01109.hp1 HG01175.hp2 HG01243.hp1 HG01515.hp1 HG02602.hp1 HG03471.hp1 HG03669.hp2 HG03834.hp2 HG06807.hp2 NA18906.hp2 NA18947.hp1 NA18957.hp1 NA18962.hp1 NA18966.hp1 NA18977.hp1 NA18981.hp1 NA18983.hp1 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18999.hp1 NA19010.hp2 NA19030.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0012 a0001c0002t0001 a0001c0002t0002 a0001c0002t0019 a0002c0003t0002	a0001c0001t0001g0239 a0001c0001t0002g0093 a0001c0001t0002g0111 others(24): Show a0001c0001t0001g0239 a0001c0001t0002g0093 a0001c0001t0002g0111 a0001c0001t0002g0134 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0211 a0001c0001t0011g0307 a0001c0001t0011g0308 a0001c0001t0011g0310 a0001c0001t0012g0167 a0001c0002t0001g0017 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0063 a0001c0002t0001g0078 a0001c0002t0001g0108 a0001c0002t0001g0200 a0001c0002t0001g0226 a0001c0002t0001g0235 a0001c0002t0001g0236 a0001c0002t0001g0246 a0001c0002t0001g0269 a0001c0002t0002g0029 a0001c0002t0019g0244 a0002c0003t0002g0292 a0002c0003t0002g0295	27	310	0.0871	2	c.136 others(19): Show c.1367+468_1367+469dupTA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757023	T T	TAC TAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18997.hp1 NA18944.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0143 a0001c0002t0001g0242 a0001c0001t0001g0143 a0001c0002t0001g0242	2	310	0.0065	2	c.136 others(19): Show c.1367+482_1367+483dupCA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757047	T T	TAC TAC	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA18952.hp1 NA19007.hp1 others(2): Show NA18949.hp1 NA18952.hp1 NA19007.hp1 NA19011.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 others(2): Show a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0148 a0001c0001t0004g0149	5	310	0.0161	2	c.136 others(19): Show c.1367+500_1367+501dupCA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757061	T T	TAC TAC	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02970.hp1 HG01106.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0050 a0001c0001t0004g0051 a0001c0001t0004g0050 a0001c0001t0004g0051	2	310	0.0065	2	c.136 others(19): Show c.1367+507_1367+508insCA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757063	T T	TAC TAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00423.hp2 others(48): Show HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00621.hp1 HG02027.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02698.hp1 HG03516.hp1 HG03834.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18961.hp1 NA18964.hp1 NA18967.hp1 NA18970.hp1 NA18974.hp1 NA18978.hp1 NA18981.hp2 NA18984.hp1 NA18986.hp1 NA18987.hp2 NA18994.hp1 NA18998.hp1 NA19000.hp1 NA19003.hp1 NA19009.hp1 NA19011.hp2 NA19012.hp1 NA19059.hp1 NA19060.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19085.hp1 NA19086.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1	a0001 a0005 a0008 others(6): Show a0001 a0005 a0008 a0009 a0010 a0014 a0015 a0017 a0026	a0001c0001 a0005c0032 a0008c0008 others(6): Show a0001c0001 a0005c0032 a0008c0008 a0009c0009 a0010c0021 a0014c0018 a0015c0012 a0017c0013 a0026c0023	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0015 a0001c0001t0024 a0005c0032t0025 a0008c0008t0003 a0009c0009t0003 a0010c0021t0004 a0014c0018t0004 a0015c0012t0004 a0017c0013t0003 a0026c0023t0003	a0001c0001t0001g0174 a0001c0001t0003g0003 a0001c0001t0003g0004 others(48): Show a0001c0001t0001g0174 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0011 a0001c0001t0003g0021 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0044 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0077 a0001c0001t0003g0082 a0001c0001t0003g0090 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0132 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0147 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0003g0159 a0001c0001t0003g0175 a0001c0001t0004g0025 a0001c0001t0004g0034 a0001c0001t0004g0035 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0061 a0001c0001t0004g0076 a0001c0001t0004g0080 a0001c0001t0004g0300 a0001c0001t0015g0150 a0001c0001t0024g0283 a0005c0032t0025g0002 a0008c0008t0003g0085 a0009c0009t0003g0041 a0010c0021t0004g0140 a0014c0018t0004g0066 a0015c0012t0004g0079 a0017c0013t0003g0069 a0026c0023t0003g0001	51	310	0.1645	2	c.136 others(19): Show c.1367+516_1367+517dupCA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757808	A A	AAG AAG	intron_variant intron_variant	MODIFIER	NA18987.hp1 NA18987.hp1	a0027 a0027	a0027c0007 a0027c0007	a0027c0007t0020 a0027c0007t0020	a0027c0007t0020g0015 a0027c0007t0020g0015	1	310	0.0032	2	c.136 others(21): Show c.1367+1254_1367+1255insGA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757811	G G	GAA GAA	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	310	0.0032	2	c.136 others(21): Show c.1367+1258_1367+1259dupAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757851	G G	GAA GAA	intron_variant intron_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0163 a0001c0001t0010g0163	1	310	0.0032	2	c.136 others(21): Show c.1367+1298_1367+1299dupAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757859	G G	GAA GAA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02056.hp1 others(8): Show HG01167.hp1 HG01169.hp1 HG02056.hp1 HG02818.hp2 HG02897.hp2 NA18953.hp1 NA18969.hp1 NA18977.hp1 NA18981.hp2 NA18987.hp1 NA18990.hp1	a0001 a0027 a0001 a0027	a0001c0001 a0027c0007 a0001c0001 a0027c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0027c0007t0020	a0001c0001t0001g0053 a0001c0001t0001g0121 a0001c0001t0001g0123 others(8): Show a0001c0001t0001g0053 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0180 a0001c0001t0002g0018 a0001c0001t0002g0168 a0001c0001t0002g0199 a0001c0001t0004g0043 a0001c0001t0008g0196 a0001c0001t0008g0210 a0027c0007t0020g0015	11	310	0.0355	2	c.136 others(21): Show c.1367+1305_1367+1306insAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20					INFO_REALIGN_3_PRIME	chrX	TogoVar
XPNPEP2_chrX_129733979_129774536	129757862	G G	GAA GAA	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	310	0.0032	2	c.136 others(21): Show c.1367+1307_1367+1308insAA		XPNPEP2	ENSG00000122121.12	transcript	ENST00000371106.4	protein_coding	14/20						chrX	TogoVar

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