Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GPBAR1_chr2_218256015_218268861	218257935	T T	TTTGGTTG others(13): Show TTTGGTTGGTTGGTTGGTTGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp2 NA18984.hp1 NA18963.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	406	0.0049	20	c.-33 others(31): Show c.-3327_-3326insTTGGTTGGTTGGTTGGTTGG	GPBAR1	ENSG00000179921.15	transcript	ENST00000519574.2	protein_coding		3079		chr2	TogoVar
GPBP1_chr5_57169059_57269673	57229941	G G	GCGTCCCG others(13): Show GCGTCCCGTCCCGTCCCGTCC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01891.hp2 HG02257.hp2 others(3): Show HG01109.hp1 HG01891.hp2 HG02257.hp2 HG03195.hp2 HG03942.hp2 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0195 others(3): Show a0001c0001t0002g0135 a0001c0001t0002g0140 a0001c0001t0002g0195 a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0003g0226	6	290	0.0207	20	c.64- others(33): Show c.64-893_64-874dupGTCCCGTCCCGTCCCGTCCC	GPBP1	ENSG00000062194.16	transcript	ENST00000506184.7	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GPBP1_chr5_57169059_57269673	57266539	C C	CTATATAT others(13): Show CTATATATAACTATATAACTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0012 a0001c0001t0016g0012	1	290	0.0035	20	c.37 others(31): Show c.3787_*3788insTATATATAACTATATAACTA	GPBP1	ENSG00000062194.16	transcript	ENST00000506184.7	protein_coding		1867		chr5	TogoVar
GPC3_chrX_133530745_133990594	133530880	T T	TACACACA others(13): Show TACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG01934.hp1 HG02922.hp2 others(3): Show HG00642.hp1 HG01934.hp1 HG02922.hp2 NA18959.hp1 NA19030.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0008 a0001c0002t0009 a0001c0001t0001 a0001c0001t0008 a0001c0002t0009	a0001c0001t0001g0028 a0001c0001t0001g0051 a0001c0001t0001g0110 others(3): Show a0001c0001t0001g0028 a0001c0001t0001g0051 a0001c0001t0001g0110 a0001c0001t0001g0136 a0001c0001t0008g0067 a0001c0002t0009g0152	6	152	0.0395	20	c.52 others(31): Show c.5243_*5244insGTGTGTGTGTGTGTGTGTGT	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding		4864		chrX	TogoVar
GPC3_chrX_133530745_133990594	133657898	C C	CAGAGAGA others(13): Show CAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0063 a0001c0002t0002g0063	1	152	0.0066	20	c.141 others(39): Show c.1413+3812_1413+3831dupCTCTCTCTCTCTCTCTCTCT	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	6/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133661633	T T	TCTCTCTC others(13): Show TCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	152	0.0066	20	c.141 others(35): Show c.1413+96_1413+97insGGAGAGAGAGAGAGAGAGAG	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	6/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133788088	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	152	0.0066	20	c.338 others(39): Show c.338-33932_338-33913dupTATATATATATATATATATA	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133842362	A A	ATATATTA others(13): Show ATATATTATATTATATTATAT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG02622.hp2 others(1): Show HG02109.hp1 HG02486.hp1 HG02622.hp2 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0026 a0001c0001t0001g0076 a0001c0002t0002g0017 others(1): Show a0001c0001t0001g0026 a0001c0001t0001g0076 a0001c0002t0002g0017 a0001c0002t0002g0098	4	152	0.0263	20	c.338 others(39): Show c.338-88187_338-88186insATATAATATAATATAATATA	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133855530	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02922.hp1 HG00140.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0123 a0001c0002t0002g0147 a0001c0001t0001g0123 a0001c0002t0002g0147	2	152	0.0132	20	c.337 others(39): Show c.337+97519_337+97520insATATATATATATATATATAT	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133863648	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	152	0.0066	20	c.337 others(39): Show c.337+89401_337+89402insAAAAAAAAAAAAAAAAAAAA	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC3_chrX_133530745_133990594	133914944	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	152	0.0066	20	c.337 others(39): Show c.337+38086_337+38105dupATATATATATATATATATAT	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC4_chrX_133295103_133420489	133303903	G G	GAGGAAGG others(13): Show GAGGAAGGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02071.hp1 HG03098.hp1 others(1): Show HG02027.hp1 HG02071.hp1 HG03098.hp1 NA18522.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0134 a0002c0002t0002g0155 a0002c0002t0002g0164 others(1): Show a0002c0002t0002g0134 a0002c0002t0002g0155 a0002c0002t0002g0164 a0002c0002t0002g0183	4	221	0.0181	20	c.129 others(37): Show c.1293-582_1293-563dupTCCTTCCTTCCTTCCTTCCT	GPC4	ENSG00000076716.9	transcript	ENST00000370828.4	protein_coding	7/8			chrX	TogoVar
GPC5_chr13_91393621_92872237	91478795	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	1	42	0.0238	20	c.325 others(39): Show c.325+29882_325+29901dupTATATATATATATATATATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91478795	T T	TTATATAT others(13): Show TTATATATATGTATATATATA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0037	1	42	0.0238	20	c.325 others(39): Show c.325+29882_325+29883insGTATATATATATATATATAT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91478822	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0040	1	42	0.0238	20	c.325 others(39): Show c.325+29901_325+29902insTATATATATATATATACACA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91478822	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0024 a0001c0004t0001g0024	1	42	0.0238	20	c.325 others(39): Show c.325+29901_325+29902insTATATATATATATATATACA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91478902	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0037	1	42	0.0238	20	c.325 others(39): Show c.325+29980_325+29981insATATATATATATATATACAC	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7			chr13	TogoVar
GPC5_chr13_91393621_92872237	91628480	A A	ATCTGTCT others(13): Show ATCTGTCTGTCTGTCTGTCTG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	42	0.0238	20	c.326 others(39): Show c.326-64703_326-64684dupGTCTGTCTGTCTGTCTGTCT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91721137	C C	CTTTCTTT others(13): Show CTTTCTTTCTTTCTTTCTTTG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	42	0.0238	20	c.102 others(39): Show c.1021-7392_1021-7391insCTTTCTTTCTTTCTTTGTTT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91907503	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	42	0.0238	20	c.128 others(37): Show c.1281-431_1281-412dupTATATATATATATATATATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92004458	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02896.hp2 HG01109.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0006 a0001c0001t0002g0037 a0001c0001t0001g0006 a0001c0001t0002g0037	2	42	0.0476	20	c.140 others(41): Show c.1401+96414_1401+96433dupTATATATATATATATATATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92004489	T T	TATATATA others(13): Show TATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03486.hp1 HG02258.hp2 HG03486.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0005c0005t0002 a0001c0001t0001 a0005c0005t0002	a0001c0001t0001g0025 a0005c0005t0002g0035 a0001c0001t0001g0025 a0005c0005t0002g0035	2	42	0.0476	20	c.140 others(41): Show c.1401+96433_1401+96434insTATATATATATATATATAAA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92385361	T T	TATACATA others(13): Show TATACATATATACATATATAC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	1	42	0.0238	20	c.156 others(43): Show c.1561+240373_1561+240374insTACATATATACATATATACA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93285630	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0021 a0001c0003t0014g0021	1	76	0.0132	20	c.160 others(39): Show c.160+58033_160+58034insATGTGTGTGTGTGTGTGTGT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93561404	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0018 a0004c0005t0018	a0004c0005t0018g0012 a0004c0005t0018g0012	1	76	0.0132	20	c.319 others(39): Show c.319+15986_319+16005dupATATATATATATATATATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93895222	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0015 a0001c0003t0011g0015	1	76	0.0132	20	c.711 others(39): Show c.711+64690_711+64691insGTGTGTGTGTGTGTGTGTGT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93930275	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02922.hp1 HG01884.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0069 a0001c0001t0016g0018 a0001c0001t0001g0069 a0001c0001t0016g0018	2	76	0.0263	20	c.712 others(39): Show c.712-97441_712-97440insTTTTTTTTTTTTTTTTTTTT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93990960	A A	AGAAGGAA others(13): Show AGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02818.hp2 HG01981.hp1 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0036 a0001c0001t0004 a0001c0001t0036	a0001c0001t0004g0067 a0001c0001t0036g0001 a0001c0001t0004g0067 a0001c0001t0036g0001	2	76	0.0263	20	c.712 others(39): Show c.712-36760_712-36741dupGAAGGAAGGAAGGAAGGAAG	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93995161	C C	CTATTTTA others(13): Show CTATTTTATTTTATTTTATTT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0035 a0001c0001t0016g0035	1	76	0.0132	20	c.712 others(39): Show c.712-32546_712-32527dupATTTTATTTTATTTTATTTT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93997581	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0063 a0001c0003t0003g0063	1	76	0.0132	20	c.712 others(39): Show c.712-30141_712-30122dupTGTGTGTGTGTGTGTGTGTG	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94034200	A A	AGAAAGAA others(13): Show AGAAAGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01433.hp1 NA19043.hp2 others(2): Show HG01256.hp2 HG01433.hp1 NA19043.hp2 NA20752.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0004 a0001c0001t0006 a0002c0002t0002 others(2): Show a0001c0001t0004 a0001c0001t0006 a0002c0002t0002 a0002c0002t0008 a0003c0004t0003	a0001c0001t0004g0042 a0001c0001t0006g0072 a0002c0002t0002g0039 others(2): Show a0001c0001t0004g0042 a0001c0001t0006g0072 a0002c0002t0002g0039 a0002c0002t0008g0044 a0003c0004t0003g0054	5	76	0.0658	20	c.877 others(37): Show c.877+6309_877+6310insAGAAGGAAGGAAGGAAGGAA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94150814	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0042 a0001c0001t0004g0042	1	76	0.0132	20	c.877 others(41): Show c.877+122937_877+122938insATATATATATATATATATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94350075	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02922.hp1 HG03209.hp1 others(4): Show HG02258.hp1 HG02922.hp1 HG03209.hp1 HG03486.hp1 HG03579.hp2 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0022 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0022 a0001c0001t0029 a0001c0003t0014 a0001c0003t0026	a0001c0001t0001g0029 a0001c0001t0001g0069 a0001c0001t0004g0042 others(4): Show a0001c0001t0001g0029 a0001c0001t0001g0069 a0001c0001t0004g0042 a0001c0001t0022g0040 a0001c0001t0029g0007 a0001c0003t0014g0021 a0001c0003t0026g0006	7	76	0.0921	20	c.115 others(41): Show c.1153-32322_1153-32321insGTGTGTGTGTGTGTGTGTGT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPCPD1_chr20_5539439_5616006	5590542	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0043 a0001c0001t0043	a0001c0001t0043g0011 a0001c0001t0043g0011	1	386	0.0026	20	c.231 others(37): Show c.231+2784_231+2785insTTTTTTTTTTTTTTTTTTTT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding	4/19			chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5604774	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG04204.hp1 NA20752.hp1 HG02523.hp1 HG04204.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0004 a0001c0004t0013 a0001c0001t0004 a0001c0004t0013	a0001c0001t0004g0238 a0001c0001t0004g0245 a0001c0004t0013g0376 a0001c0001t0004g0238 a0001c0001t0004g0245 a0001c0004t0013g0376	3	386	0.0078	20	c.-28 others(35): Show c.-28-354_-28-335dupGTGTGTGTGTGTGTGTGTGT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding	1/19			chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5615194	A A	AATATATA others(13): Show AATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0289 a0001c0001t0009g0289	1	386	0.0026	20	c.-43 others(31): Show c.-4382_-4381insATATATATATATATATATAT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4189		chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5615196	A A	AATATATA others(13): Show AATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0016 a0001c0001t0007g0016	1	386	0.0026	20	c.-43 others(31): Show c.-4384_-4383insATATATATATATATATATAT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4191		chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5615204	A A	AAAAAAAA others(13): Show AAAAAAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0361 a0001c0001t0004g0361	1	386	0.0026	20	c.-43 others(31): Show c.-4392_-4391insATATATATTTTTTTTTTTTT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4199		chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5615204	A A	AAAAAAAA others(13): Show AAAAAAAAAAAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0371 a0002c0002t0006g0371	1	386	0.0026	20	c.-43 others(31): Show c.-4392_-4391insATATATATATTTTTTTTTTT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4199		chr20	TogoVar
GPD1L_chr3_32101620_32173709	32123791	A A	AAGATAGA others(13): Show AAGATAGATAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01496.hp2 HG02615.hp1 others(2): Show HG01074.hp2 HG01496.hp2 HG02615.hp1 NA18951.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0294 a0001c0001t0002g0069 a0001c0001t0002g0070 others(2): Show a0001c0001t0001g0294 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0190 a0001c0002t0001g0299	5	360	0.0139	20	c.48- others(35): Show c.48-4253_48-4234dupTAGATAGATAGATAGATAGA	GPD1L	ENSG00000152642.11	transcript	ENST00000282541.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
GPD1L_chr3_32101620_32173709	32123839	T T	TAGATAGA others(13): Show TAGATAGATAGATAGACAGAC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0100 a0001c0001t0003g0100	1	360	0.0028	20	c.48- others(35): Show c.48-4234_48-4233insTAGATAGATAGACAGACAGA	GPD1L	ENSG00000152642.11	transcript	ENST00000282541.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
GPD1L_chr3_32101620_32173709	32123839	T T	TAGATAGA others(13): Show TAGATAGATAGATAGATAGAC	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0169 a0001c0001t0002g0169	1	360	0.0028	20	c.48- others(35): Show c.48-4234_48-4233insTAGATAGATAGATAGACAGA	GPD1L	ENSG00000152642.11	transcript	ENST00000282541.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
GPD1_chr12_50099008_50116313	50112907	C C	CGTTATGT others(13): Show CGTTATGTTATGTTATGTTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG01175.hp1 HG01261.hp1 others(26): Show HG00280.hp1 HG01175.hp1 HG01261.hp1 HG01346.hp1 HG01978.hp1 HG02040.hp1 HG02040.hp2 HG02109.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02896.hp1 HG02970.hp1 HG03139.hp1 HG03225.hp2 HG03942.hp1 NA18950.hp1 NA18950.hp2 NA18962.hp1 NA18967.hp2 NA18983.hp1 NA19009.hp1 NA19011.hp2 NA19043.hp2 NA19062.hp2 NA19078.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0001 a0001c0011t0001 a0001c0001t0001 a0001c0011t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0052 a0001c0011t0001g0002	29	406	0.0714	20	c.33 others(31): Show c.3388_*3389insGTTATGTTATGTTATGTTAT	GPD1	ENSG00000167588.13	transcript	ENST00000301149.8	protein_coding		1595		chr12	TogoVar
GPD2_chr2_156431379_156591403	156439849	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02818.hp1 NA18945.hp2 others(5): Show HG02698.hp1 HG02818.hp1 NA18945.hp2 NA18952.hp1 NA18983.hp2 NA19009.hp2 NA19060.hp1 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0006 a0001c0001 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0005t0001 a0001c0006t0001 a0001c0001t0001 a0001c0005t0001 a0001c0006t0001	a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 others(5): Show a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0246 a0001c0005t0001g0197 a0001c0005t0001g0223 a0001c0006t0001g0198	8	254	0.0315	20	c.-9+ others(35): Show c.-9+3344_-9+3363dupTAAATAAATAAATAAATAAA	GPD2	ENSG00000115159.17	transcript	ENST00000438166.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GPD2_chr2_156431379_156591403	156561040	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0196 a0001c0007t0001g0196	1	254	0.0039	20	c.116 others(39): Show c.1165+3464_1165+3483dupTTTTTTTTTTTTTTTTTTTT	GPD2	ENSG00000115159.17	transcript	ENST00000438166.7	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GPHN_chr14_66503147_67186803	66639121	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01175.hp2 NA19030.hp1 HG00280.hp2 HG01175.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0147 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0147	3	234	0.0128	20	c.65- others(37): Show c.65-41970_65-41969insATATATATATATATATATAT	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67036501	G G	GCACACAC others(13): Show GCACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00597.hp1 HG01074.hp1 others(14): Show HG00423.hp1 HG00597.hp1 HG01074.hp1 HG01978.hp2 HG02080.hp2 HG03195.hp2 HG03453.hp2 HG03491.hp1 NA18945.hp1 NA18951.hp1 NA18954.hp2 NA18964.hp2 NA19002.hp1 NA19005.hp2 NA19010.hp2 NA19063.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0083 a0001c0001t0001g0105 a0001c0001t0001g0108 others(14): Show a0001c0001t0001g0083 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0169 a0001c0001t0001g0176 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0211 a0001c0001t0001g0222 a0001c0001t0001g0234 a0001c0001t0002g0145 a0001c0001t0002g0157	17	234	0.0727	20	c.100 others(41): Show c.1006+12847_1006+12866dupCACACACACACACACACACA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	10/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67047334	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0001 a0001c0001t0016g0001	1	234	0.0043	20	c.100 others(41): Show c.1007-11305_1007-11286dupGTGTGTGTGTGTGTGTGTGT	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	10/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(13): Show AAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0115 a0001c0001t0001g0115	1	234	0.0043	20	c.114 others(41): Show c.1144+11930_1144+11931insAAAAAAAATATATATATATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(13): Show AAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18963.hp2 NA18945.hp1 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0201 a0001c0001t0001g0193 a0001c0001t0001g0201	2	234	0.0086	20	c.114 others(41): Show c.1144+11930_1144+11931insAAAAAATATATATATATATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar

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