Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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Samplehapid

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No_samplehapid

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LACC1_chr13_43874904_43898932	43882564	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0064 a0002c0002t0001g0064	1	456	0.0022	20	c.741 others(35): Show c.741+204_741+223dupATATATATATATATATATAT	LACC1	ENSG00000179630.11	transcript	ENST00000325686.7	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr13	TogoVar
LACTB2_chr8_70632266_70674185	70668748	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01993.hp2 HG01192.hp1 HG01993.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0020 a0001c0002t0003g0020	2	352	0.0057	20	c.122 others(35): Show c.122+231_122+250dupAAAAAAAAAAAAAAAAAAAA	LACTB2	ENSG00000147592.9	transcript	ENST00000276590.5	protein_coding	1/6			chr8	TogoVar
LAD1_chr1_201375833_201404324	201382516	T T	TGAAATGA others(13): Show TGAAATGACTCCTCCTCTCCC	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02818.hp1 HG02965.hp1 HG02630.hp1 HG02818.hp1 HG02965.hp1	a0007 a0009 a0007 a0009	a0007c0007 a0009c0010 a0007c0007 a0009c0010	a0007c0007t0005 a0009c0010t0005 a0007c0007t0005 a0009c0010t0005	a0007c0007t0005g0115 a0007c0007t0005g0116 a0009c0010t0005g0071 a0007c0007t0005g0115 a0007c0007t0005g0116 a0009c0010t0005g0071	3	432	0.0069	20	c.147 others(37): Show c.1473+117_1473+136dupGGGAGAGGAGGAGTCATTTC	LAD1	ENSG00000159166.15	transcript	ENST00000391967.7	protein_coding	8/9			chr1	TogoVar
LAIR2_chr19_54497831_54515687	54514555	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0018 a0003c0003t0004g0018	1	475	0.0021	20	c.39 others(31): Show c.3986_*3987insTTTTTTTTTTTTTTTTTTTT	LAIR2	ENSG00000167618.10	transcript	ENST00000301202.7	protein_coding		3869		chr19	TogoVar
LAMA1_chr18_6936742_7122797	7031680	C C	CAAATAAA others(13): Show CAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00544.hp2 others(59): Show HG00099.hp2 HG00140.hp2 HG00544.hp2 HG00558.hp1 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp2 HG01168.hp2 HG01175.hp1 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01261.hp1 HG01346.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG02040.hp2 HG02257.hp2 HG02451.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG03130.hp2 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03669.hp1 HG03831.hp2 HG03834.hp2 HG04184.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18954.hp2 NA18960.hp1 NA18967.hp2 NA18988.hp2 NA19011.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19082.hp2 NA20129.hp1 NA20805.hp2 NA21309.hp1	a0001 a0002 a0003 others(40): Show a0001 a0002 a0003 a0006 a0007 a0008 a0009 a0012 a0015 a0016 a0017 a0018 a0020 a0021 a0024 a0026 a0030 a0031 a0034 a0045 a0049 a0060 a0062 a0063 a0068 a0073 a0080 a0087 a0090 a0091 a0092 a0094 a0095 a0097 a0098 a0099 a0103 a0105 a0106 a0115 a0116 a0121 a0122	a0001c0161 a0001c0170 a0001c0171 others(54): Show a0001c0161 a0001c0170 a0001c0171 a0002c0146 a0002c0172 a0003c0142 a0003c0144 a0003c0160 a0006c0008 a0006c0192 a0006c0196 a0007c0137 a0007c0143 a0007c0163 a0008c0155 a0009c0130 a0012c0141 a0015c0154 a0016c0180 a0016c0181 a0016c0191 a0017c0026 a0017c0184 a0018c0176 a0018c0188 a0020c0023 a0021c0148 a0024c0152 a0026c0024 a0030c0179 a0030c0199 a0031c0025 a0034c0029 a0045c0055 a0049c0123 a0060c0140 a0062c0127 a0063c0201 a0068c0149 a0073c0147 a0080c0156 a0087c0190 a0090c0177 a0091c0182 a0092c0186 a0094c0187 a0095c0195 a0097c0178 a0098c0194 a0099c0197 a0103c0033 a0105c0046 a0106c0040 a0115c0044 a0116c0045 a0121c0049 a0122c0031	a0001c0161t0001 a0001c0170t0002 a0001c0171t0002 others(55): Show a0001c0161t0001 a0001c0170t0002 a0001c0171t0002 a0002c0146t0002 a0002c0172t0001 a0003c0142t0001 a0003c0144t0001 a0003c0160t0002 a0006c0008t0002 a0006c0192t0001 a0006c0196t0001 a0007c0137t0001 a0007c0143t0001 a0007c0163t0002 a0008c0155t0001 a0009c0130t0001 a0012c0141t0001 a0015c0154t0002 a0016c0180t0001 a0016c0181t0002 a0016c0191t0001 a0017c0026t0001 a0017c0026t0002 a0017c0184t0002 a0018c0176t0002 a0018c0188t0002 a0020c0023t0002 a0021c0148t0001 a0024c0152t0001 a0026c0024t0002 a0030c0179t0001 a0030c0199t0001 a0031c0025t0002 a0034c0029t0001 a0045c0055t0001 a0049c0123t0002 a0060c0140t0001 a0062c0127t0002 a0063c0201t0001 a0068c0149t0002 a0073c0147t0002 a0080c0156t0001 a0087c0190t0001 a0090c0177t0001 a0091c0182t0001 a0092c0186t0002 a0094c0187t0002 a0095c0195t0002 a0097c0178t0002 a0098c0194t0002 a0099c0197t0002 a0103c0033t0002 a0105c0046t0001 a0106c0040t0001 a0115c0044t0001 a0116c0045t0003 a0121c0049t0001 a0122c0031t0001	a0001c0161t0001g0155 a0001c0170t0002g0111 a0001c0171t0002g0110 others(59): Show a0001c0161t0001g0155 a0001c0170t0002g0111 a0001c0171t0002g0110 a0002c0146t0002g0102 a0002c0172t0001g0227 a0003c0142t0001g0209 a0003c0144t0001g0203 a0003c0160t0002g0039 a0006c0008t0002g0034 a0006c0008t0002g0092 a0006c0192t0001g0132 a0006c0196t0001g0189 a0007c0137t0001g0237 a0007c0143t0001g0274 a0007c0163t0002g0003 a0008c0155t0001g0134 a0009c0130t0001g0240 a0012c0141t0001g0270 a0015c0154t0002g0017 a0016c0180t0001g0250 a0016c0181t0002g0067 a0016c0191t0001g0231 a0017c0026t0001g0249 a0017c0026t0002g0048 a0017c0184t0002g0078 a0018c0176t0002g0022 a0018c0188t0002g0027 a0020c0023t0002g0009 a0020c0023t0002g0010 a0021c0148t0001g0278 a0024c0152t0001g0230 a0026c0024t0002g0063 a0026c0024t0002g0064 a0030c0179t0001g0212 a0030c0199t0001g0258 a0031c0025t0002g0035 a0031c0025t0002g0104 a0034c0029t0001g0122 a0045c0055t0001g0171 a0049c0123t0002g0006 a0060c0140t0001g0246 a0062c0127t0002g0077 a0063c0201t0001g0199 a0068c0149t0002g0011 a0073c0147t0002g0026 a0080c0156t0001g0259 a0087c0190t0001g0139 a0090c0177t0001g0226 a0091c0182t0001g0133 a0092c0186t0002g0053 a0094c0187t0002g0072 a0095c0195t0002g0061 a0097c0178t0002g0090 a0098c0194t0002g0043 a0099c0197t0002g0073 a0103c0033t0002g0115 a0105c0046t0001g0253 a0106c0040t0001g0170 a0115c0044t0001g0192 a0116c0045t0003g0130 a0121c0049t0001g0206 a0122c0031t0001g0148	62	278	0.2230	20	c.227 others(37): Show c.2274+366_2274+385dupATTTATTTATTTATTTATTT	LAMA1	ENSG00000101680.16	transcript	ENST00000389658.4	protein_coding	16/62			chr18	TogoVar
LAMA2_chr6_128878138_129521566	128962185	T T	TATATATA others(13): Show TATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0010 a0002c0003t0005g0010	1	88	0.0114	20	c.112 others(39): Show c.112+78829_112+78830insTATATATATATACACACACA	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	1/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	128962185	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0033 a0033	a0033c0058 a0033c0058	a0033c0058t0009 a0033c0058t0009	a0033c0058t0009g0004 a0033c0058t0009g0004	1	88	0.0114	20	c.112 others(39): Show c.112+78829_112+78830insTATATATATATATATATACA	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	1/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129048493	T T	TTTCTTTC others(13): Show TTTCTTTCTTTCTTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0004 a0004	a0004c0048 a0004c0048	a0004c0048t0003 a0004c0048t0003	a0004c0048t0003g0013 a0004c0048t0003g0013	1	88	0.0114	20	c.113 others(37): Show c.113-1422_113-1421insTTTCTTTCTTTCCTTCCTTC	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	1/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129048540	C C	CCTTCCTT others(13): Show CCTTCCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0017 a0017	a0017c0071 a0017c0071	a0017c0071t0005 a0017c0071t0005	a0017c0071t0005g0050 a0017c0071t0005g0050	1	88	0.0114	20	c.113 others(37): Show c.113-1375_113-1374insCCTTCCTTTCTTTCTTTCTT	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	1/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129066038	G G	GTATGTCT others(13): Show GTATGTCTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01261.hp1 HG01074.hp2 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0056 a0001c0001t0001g0001 a0001c0001t0001g0056	2	88	0.0227	20	c.396 others(37): Show c.396+6143_396+6144insATGTCTTTTTTTTTTTTTTT	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	3/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129205478	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02723.hp1 HG00140.hp1 HG02723.hp1	a0003 a0017 a0003 a0017	a0003c0027 a0017c0071 a0003c0027 a0017c0071	a0003c0027t0001 a0017c0071t0005 a0003c0027t0001 a0017c0071t0005	a0003c0027t0001g0002 a0017c0071t0005g0050 a0003c0027t0001g0002 a0017c0071t0005g0050	2	88	0.0227	20	c.178 others(41): Show c.1782+12641_1782+12642insTATATATATATATATATATA	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	12/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129309902	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0004 a0004	a0004c0051 a0004c0051	a0004c0051t0001 a0004c0051t0001	a0004c0051t0001g0008 a0004c0051t0001g0008	1	88	0.0114	20	c.317 others(39): Show c.3175-2944_3175-2943insTTTTTTTTTTTTTTTTTTTT	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	22/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129326745	T T	TATATATA others(13): Show TATATATAATTTATATATATA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG03710.hp2 HG00140.hp1 HG03710.hp2	a0003 a0003	a0003c0027 a0003c0030 a0003c0027 a0003c0030	a0003c0027t0001 a0003c0030t0002 a0003c0027t0001 a0003c0030t0002	a0003c0027t0001g0002 a0003c0030t0002g0041 a0003c0027t0001g0002 a0003c0030t0002g0041	2	88	0.0227	20	c.417 others(39): Show c.4177-1515_4177-1496dupATAATATATAATTTATATAT	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	28/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129446514	A A	AGAGGGGA others(13): Show AGAGGGGAGGGGAGGGGAGGG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0034 a0034	a0034c0055 a0034c0055	a0034c0055t0002 a0034c0055t0002	a0034c0055t0002g0030 a0034c0055t0002g0030	1	88	0.0114	20	c.642 others(37): Show c.6429+698_6429+717dupGGAGGGGAGGGGAGGGGAGG	LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	45/64		INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA3_chr18_23684453_23960066	23687746	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp1 HG03041.hp1 HG03540.hp1 others(1): Show HG02818.hp1 HG03041.hp1 HG03540.hp1 HG04115.hp2	a0001 a0001	a0001c0010 a0001c0011 a0001c0023 a0001c0010 a0001c0011 a0001c0023	a0001c0010t0001 a0001c0011t0001 a0001c0023t0001 a0001c0010t0001 a0001c0011t0001 a0001c0023t0001	a0001c0010t0001g0158 a0001c0011t0001g0113 a0001c0011t0001g0114 others(1): Show a0001c0010t0001g0158 a0001c0011t0001g0113 a0001c0011t0001g0114 a0001c0023t0001g0237	4	280	0.0143	20	c.-19 others(31): Show c.-1938_-1937insTGTGTGTGTGTGTGTGTGTG	LAMA3	ENSG00000053747.17	transcript	ENST00000313654.14	protein_coding		1706		chr18	TogoVar
LAMA3_chr18_23684453_23960066	23699024	T T	TAGAGAGA others(13): Show TAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0036 a0036	a0036c0025 a0036c0025	a0036c0025t0001 a0036c0025t0001	a0036c0025t0001g0149 a0036c0025t0001g0149	1	280	0.0036	20	c.294 others(37): Show c.294+9059_294+9078dupGAGAGAGAGAGAGAGAGAGA	LAMA3	ENSG00000053747.17	transcript	ENST00000313654.14	protein_coding	1/74		INFO_REALIGN_3_PRIME	chr18	TogoVar
LAMA3_chr18_23684453_23960066	23837570	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01074.hp2 HG01099.hp2 others(30): Show HG00099.hp2 HG01074.hp2 HG01099.hp2 HG01258.hp2 HG01496.hp2 HG01516.hp2 HG01884.hp1 HG01934.hp1 HG01975.hp2 HG01993.hp2 HG02040.hp2 HG02071.hp2 HG02818.hp2 HG03195.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp1 HG03669.hp2 HG03704.hp2 HG04115.hp2 HG04184.hp1 NA18747.hp1 NA18959.hp1 NA18962.hp1 NA18964.hp1 NA18979.hp1 NA19090.hp1 NA20129.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp2	a0001 a0003 a0005 others(4): Show a0001 a0003 a0005 a0020 a0022 a0023 a0031	a0001c0001 a0001c0010 a0001c0011 others(6): Show a0001c0001 a0001c0010 a0001c0011 a0003c0004 a0005c0006 a0020c0030 a0022c0046 a0023c0037 a0031c0045	a0001c0001t0002 a0001c0010t0001 a0001c0011t0001 others(6): Show a0001c0001t0002 a0001c0010t0001 a0001c0011t0001 a0003c0004t0001 a0005c0006t0001 a0020c0030t0004 a0022c0046t0002 a0023c0037t0001 a0031c0045t0001	a0001c0001t0002g0063 a0001c0001t0002g0075 a0001c0001t0002g0161 others(30): Show a0001c0001t0002g0063 a0001c0001t0002g0075 a0001c0001t0002g0161 a0001c0001t0002g0167 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0187 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0198 a0001c0001t0002g0204 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0236 a0001c0010t0001g0150 a0001c0010t0001g0158 a0001c0011t0001g0114 a0001c0011t0001g0224 a0003c0004t0001g0248 a0003c0004t0001g0265 a0003c0004t0001g0269 a0003c0004t0001g0270 a0003c0004t0001g0274 a0005c0006t0001g0126 a0020c0030t0004g0245 a0022c0046t0002g0188 a0023c0037t0001g0223 a0031c0045t0001g0131	33	280	0.1179	20	c.309 others(37): Show c.3093+486_3093+505dupATATATATATATATATATAT	LAMA3	ENSG00000053747.17	transcript	ENST00000313654.14	protein_coding	25/74		INFO_REALIGN_3_PRIME	chr18	TogoVar
LAMA4_chr6_112102931_112259567	112130298	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0012 a0012	a0012c0028 a0012c0028	a0012c0028t0002 a0012c0028t0002	a0012c0028t0002g0155 a0012c0028t0002g0155	1	314	0.0032	20	c.396 others(37): Show c.3969-259_3969-258insCACACACACACACACACACA	LAMA4	ENSG00000112769.20	transcript	ENST00000230538.12	protein_coding	29/38			chr6	TogoVar
LAMA4_chr6_112102931_112259567	112190947	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01515.hp1 NA18971.hp1 HG01175.hp1 HG01515.hp1 NA18971.hp1	a0003 a0004 a0007 a0003 a0004 a0007	a0003c0004 a0004c0007 a0007c0014 a0003c0004 a0004c0007 a0007c0014	a0003c0004t0001 a0004c0007t0014 a0007c0014t0002 a0003c0004t0001 a0004c0007t0014 a0007c0014t0002	a0003c0004t0001g0018 a0004c0007t0014g0300 a0007c0014t0002g0292 a0003c0004t0001g0018 a0004c0007t0014g0300 a0007c0014t0002g0292	3	314	0.0096	20	c.718 others(35): Show c.718+669_718+688dupAAAGAAAGAAAGAAAGAAAG	LAMA4	ENSG00000112769.20	transcript	ENST00000230538.12	protein_coding	6/38			chr6	TogoVar
LAMA4_chr6_112102931_112259567	112190947	C C	CTTTCCTT others(13): Show CTTTCCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0235 a0001c0005t0001g0235	1	314	0.0032	20	c.718 others(35): Show c.718+688_718+689insAAAGAAAGAAAGAAAGGAAA	LAMA4	ENSG00000112769.20	transcript	ENST00000230538.12	protein_coding	6/38			chr6	TogoVar
LAMA5_chr20_62304065_62372312	62309639	T T	TGGGGGGT others(13): Show TGGGGGGTGGGAGGGGGTGGG	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02055.hp1 HG02717.hp2 others(2): Show HG01358.hp1 HG02055.hp1 HG02717.hp2 HG02886.hp1 HG03486.hp2	a0049 a0064 a0072 others(2): Show a0049 a0064 a0072 a0073 a0090	a0049c0121 a0064c0040 a0072c0042 others(2): Show a0049c0121 a0064c0040 a0072c0042 a0073c0039 a0090c0066	a0049c0121t0006 a0064c0040t0001 a0072c0042t0001 others(2): Show a0049c0121t0006 a0064c0040t0001 a0072c0042t0001 a0073c0039t0001 a0090c0066t0001	a0049c0121t0006g0076 a0064c0040t0001g0023 a0072c0042t0001g0021 others(2): Show a0049c0121t0006g0076 a0064c0040t0001g0023 a0072c0042t0001g0021 a0073c0039t0001g0022 a0090c0066t0001g0019	5	186	0.0269	20	c.109 others(37): Show c.10948+76_10948+77insCCCACCCCCTCCCACCCCCC	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	79/79			chr20	TogoVar
LAMA5_chr20_62304065_62372312	62317970	T T	TGGGGAAG others(13): Show TGGGGAAGAAGAGAAAGGAAG	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0132 a0002c0003t0001g0132	1	186	0.0054	20	c.724 others(37): Show c.7240-212_7240-193dupCTTCCTTTCTCTTCTTCCCC	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	53/79			chr20	TogoVar
LAMA5_chr20_62304065_62372312	62360602	G G	GTGGGTGG others(13): Show GTGGGTGGGTGGAGGAATAGA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01358.hp2 HG02258.hp1 others(4): Show HG01256.hp2 HG01358.hp2 HG02258.hp1 HG03579.hp1 NA18966.hp1 NA19012.hp2 NA19043.hp2	a0000 a0001 a0003 others(4): Show a0000 a0001 a0003 a0026 a0031 a0060 a0085	a0000c0065 a0001c0001 a0003c0002 others(4): Show a0000c0065 a0001c0001 a0003c0002 a0026c0061 a0031c0070 a0060c0071 a0085c0056	a0000c0065t0001 a0001c0001t0001 a0003c0002t0001 others(4): Show a0000c0065t0001 a0001c0001t0001 a0003c0002t0001 a0026c0061t0001 a0031c0070t0001 a0060c0071t0001 a0085c0056t0001	a0000c0065t0001g0041 a0001c0001t0001g0115 a0003c0002t0001g0028 others(4): Show a0000c0065t0001g0041 a0001c0001t0001g0115 a0003c0002t0001g0028 a0026c0061t0001g0047 a0031c0070t0001g0050 a0060c0071t0001g0042 a0085c0056t0001g0035	7	186	0.0376	20	c.450 others(37): Show c.450+1797_450+1798insTCTATTCCTCCACCCACCCA	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	2/79			chr20	TogoVar
LAMA5_chr20_62304065_62372312	62360614	A A	AGGAATAG others(13): Show AGGAATAGATGGGTGGGTGGG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01943.hp2 NA18971.hp1 HG01243.hp2 HG01943.hp2 NA18971.hp1	a0006 a0042 a0006 a0042	a0006c0011 a0042c0099 a0006c0011 a0042c0099	a0006c0011t0001 a0042c0099t0001 a0006c0011t0001 a0042c0099t0001	a0006c0011t0001g0093 a0006c0011t0001g0095 a0042c0099t0001g0094 a0006c0011t0001g0093 a0006c0011t0001g0095 a0042c0099t0001g0094	3	186	0.0161	20	c.450 others(37): Show c.450+1785_450+1786insCCCACCCACCCATCTATTCC	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	2/79			chr20	TogoVar
LAMB1_chr7_107918799_108008161	107977003	C C	CCTTTCCT others(13): Show CCTTTCCTCTCTTTTCCTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0045 a0001c0045	a0001c0045t0001 a0001c0045t0001	a0001c0045t0001g0038 a0001c0045t0001g0038	1	364	0.0028	20	c.100 others(39): Show c.1000+1043_1000+1044insAAAAGGAAAAGAGAGGAAAG	LAMB1	ENSG00000091136.15	transcript	ENST00000222399.11	protein_coding	9/33			chr7	TogoVar
LAMB3_chr1_209609870_209657425	209624880	G G	GAGGAAGG others(13): Show GAGGAAGGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02148.hp2 NA18990.hp1 others(1): Show HG02004.hp1 HG02148.hp2 NA18990.hp1 NA19000.hp2	a0001 a0010 a0001 a0010	a0001c0003 a0010c0031 a0001c0003 a0010c0031	a0001c0003t0002 a0010c0031t0002 a0010c0031t0006 a0001c0003t0002 a0010c0031t0002 a0010c0031t0006	a0001c0003t0002g0044 a0010c0031t0002g0299 a0010c0031t0006g0300 a0001c0003t0002g0044 a0010c0031t0002g0299 a0010c0031t0006g0300	4	444	0.0090	20	c.197 others(37): Show c.1976+748_1976+767dupTCCTTCCTTCCTTCCTTCCT	LAMB3	ENSG00000196878.15	transcript	ENST00000356082.9	protein_coding	14/22			chr1	TogoVar
LAMB4_chr7_108018553_108135361	108024714	G G	GATCCATC others(13): Show GATCCATCCATCCATCCATCC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0007 a0007	a0007c0011 a0007c0011	a0007c0011t0002 a0007c0011t0002	a0007c0011t0002g0102 a0007c0011t0002g0102	1	292	0.0034	20	c.514 others(37): Show c.5147-556_5147-537dupGGATGGATGGATGGATGGAT	LAMB4	ENSG00000091128.13	transcript	ENST00000388781.8	protein_coding	33/33			chr7	TogoVar
LAMB4_chr7_108018553_108135361	108024739	A A	ATCCATCC others(13): Show ATCCATCCATCCATCCATCCG	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0016 a0016	a0016c0061 a0016c0061	a0016c0061t0002 a0016c0061t0002	a0016c0061t0002g0155 a0016c0061t0002g0155	1	292	0.0034	20	c.514 others(37): Show c.5147-562_5147-561insCGGATGGATGGATGGATGGA	LAMB4	ENSG00000091128.13	transcript	ENST00000388781.8	protein_coding	33/33			chr7	TogoVar
LAMC1_chr1_183018420_183150592	183140245	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02622.hp2 HG02809.hp1 others(3): Show HG02109.hp2 HG02622.hp2 HG02809.hp1 HG02895.hp1 HG03209.hp1 HG03453.hp1	a0001 a0010 a0013 others(1): Show a0001 a0010 a0013 a0019	a0001c0013 a0001c0018 a0010c0025 others(2): Show a0001c0013 a0001c0018 a0010c0025 a0013c0019 a0019c0031	a0001c0013t0009 a0001c0018t0010 a0010c0025t0022 others(2): Show a0001c0013t0009 a0001c0018t0010 a0010c0025t0022 a0013c0019t0010 a0019c0031t0009	a0001c0013t0009g0244 a0001c0013t0009g0245 a0001c0018t0010g0138 others(3): Show a0001c0013t0009g0244 a0001c0013t0009g0245 a0001c0018t0010g0138 a0010c0025t0022g0146 a0013c0019t0010g0124 a0019c0031t0009g0246	6	308	0.0195	20	c.447 others(37): Show c.4474-158_4474-139dupAAAAAAAAAAAAAAAAAAAA	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	26/27		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAMC1_chr1_183018420_183150592	183145732	A A	ATATATAT others(13): Show ATATATATATATATATATATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG02896.hp2 HG03516.hp2 HG01891.hp2 HG02896.hp2 HG03516.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0005 a0004c0007t0005	a0004c0007t0005g0122 a0004c0007t0005g0216 a0004c0007t0005g0218 a0004c0007t0005g0122 a0004c0007t0005g0216 a0004c0007t0005g0218	3	308	0.0097	20	c.29 others(31): Show c.2942_*2943insTATATATATATATATATATG	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding		141		chr1	TogoVar
LAMC3_chr9_131004174_131099473	131022215	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02109.hp1 HG03834.hp1 others(3): Show HG00738.hp1 HG02109.hp1 HG03834.hp1 HG04184.hp1 NA19043.hp1 NA20300.hp1	a0036 a0043 a0056 others(3): Show a0036 a0043 a0056 a0075 a0089 a0092	a0036c0156 a0043c0033 a0056c0208 others(3): Show a0036c0156 a0043c0033 a0056c0208 a0075c0162 a0089c0140 a0092c0131	a0036c0156t0001 a0043c0033t0031 a0056c0208t0023 others(3): Show a0036c0156t0001 a0043c0033t0031 a0056c0208t0023 a0075c0162t0002 a0089c0140t0001 a0092c0131t0010	a0036c0156t0001g0052 a0043c0033t0031g0054 a0056c0208t0023g0360 others(3): Show a0036c0156t0001g0052 a0043c0033t0031g0054 a0056c0208t0023g0360 a0075c0162t0002g0350 a0089c0140t0001g0247 a0092c0131t0010g0004	6	360	0.0167	20	c.374 others(37): Show c.374-4060_374-4041dupCACACACACACACACACACA	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131046518	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0038 a0038	a0038c0200 a0038c0200	a0038c0200t0005 a0038c0200t0005	a0038c0200t0005g0097 a0038c0200t0005g0097	1	360	0.0028	20	c.151 others(37): Show c.1519+865_1519+884dupTTTTTTTTTTTTTTTTTTTT	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131047165	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0055 a0055	a0055c0207 a0055c0207	a0055c0207t0001 a0055c0207t0001	a0055c0207t0001g0356 a0055c0207t0001g0356	1	360	0.0028	20	c.151 others(39): Show c.1519+1522_1519+1523insTTTTTTTTTTTTTTTTTTTT	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131096449	A A	AGGGGAGG others(13): Show AGGGGAGGGGCGAGGCGGGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 HG01106.hp1 NA18970.hp2 others(4): Show HG00738.hp1 HG01106.hp1 NA18970.hp2 NA18979.hp2 NA19009.hp1 NA19009.hp2 NA19070.hp2	a0001 a0011 a0014 others(2): Show a0001 a0011 a0014 a0032 a0089	a0001c0011 a0011c0017 a0014c0014 others(2): Show a0001c0011 a0011c0017 a0014c0014 a0032c0100 a0089c0140	a0001c0011t0001 a0011c0017t0001 a0014c0014t0001 others(2): Show a0001c0011t0001 a0011c0017t0001 a0014c0014t0001 a0032c0100t0001 a0089c0140t0001	a0001c0011t0001g0077 a0011c0017t0001g0102 a0011c0017t0001g0316 others(4): Show a0001c0011t0001g0077 a0011c0017t0001g0102 a0011c0017t0001g0316 a0011c0017t0001g0320 a0014c0014t0001g0144 a0032c0100t0001g0243 a0089c0140t0001g0247	7	360	0.0194	20	c.46 others(31): Show c.4662_*4663insGGGGAGGGGCGAGGCGGGAG	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding		1977		chr9	TogoVar
LAMP1_chr13_113292239_113328672	113324404	G G	GAAAGCAG others(13): Show GAAAGCAGTGAAAGTTGGTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	354	0.0028	20	c.19 others(31): Show c.1983_*1984insAAAGCAGTGAAAGTTGGTCC	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding		733		chr13	TogoVar
LAMP3_chr3_183117215_183167734	183149572	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18941.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0050 a0001c0003t0002g0050	1	372	0.0027	20	c.888 others(37): Show c.888+2802_888+2803insATATATATATATATATATAT	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	3/5			chr3	TogoVar
LAMP3_chr3_183117215_183167734	183149574	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02165.hp2 NA18962.hp2 HG02165.hp2 NA18962.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0112 a0001c0003t0002g0052 a0001c0003t0001g0112 a0001c0003t0002g0052	2	372	0.0054	20	c.888 others(37): Show c.888+2781_888+2800dupATATATATATATATATATAT	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	3/5			chr3	TogoVar
LAMP5_chr20_9509590_9535524	9517621	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02258.hp2 HG02976.hp1 HG01081.hp1 HG02258.hp2 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003	a0002c0002t0001g0364 a0002c0002t0002g0363 a0002c0002t0003g0307 a0002c0002t0001g0364 a0002c0002t0002g0363 a0002c0002t0003g0307	3	448	0.0067	20	c.476 others(35): Show c.476-404_476-403insGTGTGTGTGTGTGTGTGTGT	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr20	TogoVar
LAMP5_chr20_9509590_9535524	9526860	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	448	0.0022	20	c.665 others(37): Show c.665-2759_665-2740dupTATATATATATATATATATA	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr20	TogoVar
LAMTOR3_chr4_99873336_99899427	99886918	A A	ATGTATGT others(13): Show ATGTATGTATATATGTGGGTG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02809.hp1 HG00735.hp2 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0094 a0001c0001t0003g0097 a0001c0001t0003g0094 a0001c0001t0003g0097	2	384	0.0052	20	c.103 others(35): Show c.103+377_103+378insCACCCACATATATACATACA	LAMTOR3	ENSG00000109270.13	transcript	ENST00000499666.7	protein_coding	4/6			chr4	TogoVar
LANCL1_chr2_210426251_210481759	210474739	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00544.hp2 others(49): Show HG00408.hp1 HG00438.hp1 HG00544.hp2 HG00738.hp2 HG01123.hp1 HG01168.hp1 HG01169.hp1 HG01256.hp1 HG01361.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG02015.hp1 HG02040.hp1 HG02523.hp1 HG03239.hp1 HG03453.hp1 NA18747.hp2 NA18944.hp2 NA18949.hp1 NA18952.hp2 NA18953.hp2 NA18956.hp1 NA18957.hp1 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18965.hp2 NA18970.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18977.hp2 NA18980.hp1 NA18983.hp1 NA18988.hp2 NA18991.hp2 NA19000.hp2 NA19001.hp2 NA19010.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19067.hp2 NA19070.hp1 NA19077.hp2 NA19082.hp1 NA19085.hp2 NA19086.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0005 a0001c0001 a0006c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0016 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0016 a0001c0001t0017 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0006c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 others(30): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0002g0157 a0001c0001t0016g0150 a0001c0001t0017g0149 a0001c0001t0025g0153 a0001c0001t0026g0154 a0001c0001t0027g0145 a0006c0005t0001g0146	52	358	0.1453	20	c.81+ others(35): Show c.81+1557_81+1576dupATTTATTTATTTATTTATTT	LANCL1	ENSG00000115365.13	transcript	ENST00000450366.7	protein_coding	2/9			chr2	TogoVar
LANCL2_chr7_55360337_55438737	55415621	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01175.hp2 HG01192.hp1 others(14): Show HG00621.hp1 HG01175.hp2 HG01192.hp1 HG01978.hp1 HG02055.hp2 HG02257.hp1 HG02559.hp1 HG02622.hp2 HG02723.hp1 HG03225.hp2 HG03579.hp2 HG03834.hp2 HG04115.hp1 NA18965.hp2 NA18997.hp1 NA19054.hp1 NA19058.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0003 a0001c0004 a0002c0003	a0001c0004t0002 a0001c0004t0013 a0001c0004t0025 others(2): Show a0001c0004t0002 a0001c0004t0013 a0001c0004t0025 a0002c0003t0002 a0002c0003t0009	a0001c0004t0002g0183 a0001c0004t0013g0032 a0001c0004t0013g0033 others(14): Show a0001c0004t0002g0183 a0001c0004t0013g0032 a0001c0004t0013g0033 a0001c0004t0025g0323 a0002c0003t0002g0027 a0002c0003t0002g0030 a0002c0003t0002g0031 a0002c0003t0002g0036 a0002c0003t0002g0048 a0002c0003t0002g0050 a0002c0003t0002g0056 a0002c0003t0002g0061 a0002c0003t0002g0069 a0002c0003t0002g0073 a0002c0003t0002g0074 a0002c0003t0002g0077 a0002c0003t0009g0066	17	352	0.0483	20	c.100 others(39): Show c.1008+3540_1008+3541insTTTTTTTTTTTTTTTTTTTT	LANCL2	ENSG00000132434.10	transcript	ENST00000254770.3	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0171	1	300	0.0033	20	c.-37 others(31): Show c.-3736_-3735insTGTGTGTGTGTATATATATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp2 HG03831.hp2 NA18945.hp1 others(4): Show HG01192.hp2 HG03831.hp2 NA18945.hp1 NA18956.hp1 NA18995.hp1 NA19012.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0011 a0001c0001t0004 a0001c0001t0011	a0001c0001t0004g0003 a0001c0001t0004g0017 a0001c0001t0004g0220 others(2): Show a0001c0001t0004g0003 a0001c0001t0004g0017 a0001c0001t0004g0220 a0001c0001t0004g0222 a0001c0001t0011g0218	7	300	0.0233	20	c.-37 others(31): Show c.-3736_-3735insTGTGTGTGTGTGTGTATATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAPTM4B_chr8_97770788_97858013	97832676	T T	TTTTTATT others(13): Show TTTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02109.hp2 HG02257.hp2 others(7): Show HG00558.hp2 HG02109.hp2 HG02257.hp2 HG02280.hp2 HG02622.hp2 HG02717.hp2 HG03139.hp1 NA18522.hp1 NA18906.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0001c0001t0008 a0002c0003t0013 a0001c0001t0003 a0001c0001t0008 a0002c0003t0013	a0001c0001t0003g0314 a0001c0001t0008g0020 a0001c0001t0008g0022 others(7): Show a0001c0001t0003g0314 a0001c0001t0008g0020 a0001c0001t0008g0022 a0001c0001t0008g0023 a0001c0001t0008g0027 a0001c0001t0008g0028 a0001c0001t0008g0029 a0001c0001t0008g0030 a0001c0001t0008g0054 a0002c0003t0013g0216	10	380	0.0263	20	c.603 others(37): Show c.603+7533_603+7552dupATTTTATTTTATTTTATTTT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97834144	G G	GAAAAAAA others(13): Show GAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00544.hp2 HG00558.hp1 others(25): Show HG00423.hp1 HG00544.hp2 HG00558.hp1 HG00735.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp2 HG02056.hp2 HG02074.hp1 HG02129.hp2 HG02132.hp2 HG02145.hp2 HG02155.hp1 HG02486.hp1 HG02523.hp2 HG02647.hp1 HG03704.hp1 HG04115.hp1 NA18947.hp1 NA18949.hp1 NA18954.hp2 NA18962.hp1 NA18982.hp1 NA18997.hp2 NA19082.hp2 NA19084.hp1 NA19087.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0005t0001	a0001c0001t0001g0052 a0001c0001t0001g0092 a0001c0001t0001g0094 others(25): Show a0001c0001t0001g0052 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0113 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0163 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0279 a0001c0001t0001g0291 a0001c0001t0001g0298 a0001c0001t0001g0317 a0001c0001t0001g0330 a0001c0001t0001g0337 a0001c0001t0005g0125 a0001c0001t0005g0321 a0001c0001t0005g0335 a0001c0001t0006g0083 a0001c0001t0006g0120 a0001c0001t0007g0183 a0001c0005t0001g0017 a0001c0005t0001g0024	28	380	0.0737	20	c.603 others(37): Show c.603+9005_603+9006insAAAAAAAAAAAAAAAAAAAA	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97843780	C C	CAAATAAA others(13): Show CAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA19087.hp2 NA19088.hp2 NA18954.hp2 NA19087.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0273 a0001c0001t0001g0291 a0001c0001t0001g0298 a0001c0001t0001g0273 a0001c0001t0001g0291 a0001c0001t0001g0298	3	380	0.0079	20	c.604 others(37): Show c.604-7600_604-7581dupAAATAAATAAATAAATAAAT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850465	G G	GGGGTGTG others(13): Show GGGGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0003	1	380	0.0026	20	c.604 others(35): Show c.604-931_604-930insGGTGTGTGTGTGTGTGTGTG	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850474	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp2 HG02257.hp2 others(12): Show HG01884.hp2 HG02109.hp2 HG02257.hp2 HG02280.hp2 HG02622.hp1 HG02717.hp2 HG02922.hp2 HG02970.hp2 HG03098.hp2 HG03139.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 others(1): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0002t0009	a0001c0001t0003g0077 a0001c0001t0007g0172 a0001c0001t0007g0199 others(12): Show a0001c0001t0003g0077 a0001c0001t0007g0172 a0001c0001t0007g0199 a0001c0001t0008g0012 a0001c0001t0008g0020 a0001c0001t0008g0021 a0001c0001t0008g0022 a0001c0001t0008g0023 a0001c0001t0008g0027 a0001c0001t0008g0028 a0001c0001t0008g0029 a0001c0001t0008g0030 a0001c0001t0008g0054 a0001c0001t0008g0362 a0001c0002t0009g0167	15	380	0.0395	20	c.604 others(35): Show c.604-908_604-907insGTGTATGTGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850476	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0313 a0001c0001t0002g0313	1	380	0.0026	20	c.604 others(35): Show c.604-908_604-907insGTGTGTATGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar

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