Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LIN52_chr14_74079956_74206493	74130278	G G	GTGTTTTT others(13): Show GTGTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0229 a0001c0001t0024g0229	1	354	0.0028	20	c.283 others(39): Show c.283+29041_283+29042insGTTTTTTTTTTTTTTTTTTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN52_chr14_74079956_74206493	74130278	G G	GTTTGTTT others(13): Show GTTTGTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0202 a0001c0001t0029g0202	1	354	0.0028	20	c.283 others(39): Show c.283+29043_283+29044insGTTTTTTTTTTTTTTTTTTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN52_chr14_74079956_74206493	74130278	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01261.hp2 HG01433.hp1 others(11): Show HG01175.hp1 HG01261.hp2 HG01433.hp1 HG01934.hp2 HG01978.hp2 HG02055.hp1 HG02257.hp2 HG02897.hp1 NA18947.hp2 NA18962.hp2 NA18988.hp1 NA19004.hp1 NA19030.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 a0001c0001t0001 a0001c0001t0004 a0001c0001t0012	a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 others(11): Show a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0226 a0001c0001t0001g0241 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0252 a0001c0001t0001g0256 a0001c0001t0001g0264 a0001c0001t0001g0292 a0001c0001t0004g0345 a0001c0001t0012g0081	14	354	0.0396	20	c.283 others(39): Show c.283+29058_283+29059insTTTTTTTTTTTTTTTTTTTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN54_chr4_82919603_83015823	82941149	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	304	0.0033	20	c.116 others(39): Show c.1169-1207_1169-1188dupATATATATATATATATATAT	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	5/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	82947235	A A	ATATATAT others(13): Show ATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0292 a0001c0001t0008g0292	1	304	0.0033	20	c.952 others(35): Show c.952-762_952-761insAAAAAAAAAAAAAATATATA	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	4/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	82955369	A A	AATAACAT others(13): Show AATAACATAACATAACATAAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp2 HG04184.hp1 others(4): Show HG01109.hp1 HG01109.hp2 HG04184.hp1 HG06807.hp1 NA18966.hp1 NA18978.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0027	a0001c0001t0002g0253 a0001c0001t0002g0270 a0001c0001t0002g0294 others(4): Show a0001c0001t0002g0253 a0001c0001t0002g0270 a0001c0001t0002g0294 a0001c0001t0004g0157 a0001c0001t0004g0158 a0001c0001t0005g0288 a0001c0001t0027g0271	7	304	0.0230	20	c.952 others(37): Show c.952-8915_952-8896dupGTTATGTTATGTTATGTTAT	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	4/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	82979939	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18977.hp1 NA19070.hp2 NA18977.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0253 a0001c0001t0002g0257 a0001c0001t0002g0253 a0001c0001t0002g0257	2	304	0.0066	20	c.685 others(35): Show c.685-953_685-934dupTTTTTTTTTTTTTTTTTTTT	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	2/12			chr4	TogoVar
LIN7A_chr12_80787520_80942934	80807063	G G	GTTTTTTT others(13): Show GTTTTTTTTTGTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02165.hp2 NA19074.hp2 HG02165.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0232 a0001c0001t0001g0112 a0001c0001t0001g0232	2	292	0.0069	20	c.702 others(37): Show c.702+4401_702+4402insAAAAAAAAAACAAAAAAAAA	LIN7A	ENSG00000111052.8	transcript	ENST00000552864.6	protein_coding	5/5			chr12	TogoVar
LIN7A_chr12_80787520_80942934	80807063	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0031 a0001c0001t0003g0031	1	292	0.0034	20	c.702 others(37): Show c.702+4382_702+4401dupAAAAAAAAAAAAAAAAAAAA	LIN7A	ENSG00000111052.8	transcript	ENST00000552864.6	protein_coding	5/5			chr12	TogoVar
LIN7A_chr12_80787520_80942934	80820630	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02897.hp2 HG03471.hp1 HG02809.hp2 HG02897.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0176 a0001c0001t0005g0177 a0001c0001t0005g0179 a0001c0001t0005g0176 a0001c0001t0005g0177 a0001c0001t0005g0179	3	292	0.0103	20	c.484 others(37): Show c.484-8967_484-8948dupGTGTGTGTGTGTGTGTGTGT	LIN7A	ENSG00000111052.8	transcript	ENST00000552864.6	protein_coding	4/5			chr12	TogoVar
LIN7A_chr12_80787520_80942934	80882287	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01106.hp2 HG01074.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0083 a0001c0001t0001g0002 a0001c0001t0001g0083	2	292	0.0069	20	c.201 others(37): Show c.201+6963_201+6964insAAAAAAAAAAAAAAAAAAAA	LIN7A	ENSG00000111052.8	transcript	ENST00000552864.6	protein_coding	2/5			chr12	TogoVar
LIN9_chr1_226226157_226314164	226260628	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02647.hp1 HG02738.hp2 HG02572.hp2 HG02647.hp1 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0306 a0001c0001t0001g0308 a0001c0001t0001g0312 a0001c0001t0001g0306 a0001c0001t0001g0308 a0001c0001t0001g0312	3	364	0.0082	20	c.103 others(39): Show c.1038+4885_1038+4904dupAAAAAAAAAAAAAAAAAAAA	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226267310	T T	TTATGTAT others(13): Show TTATGTATGTATGTATGTATG	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01978.hp1 HG02004.hp1 others(2): Show HG01255.hp2 HG01978.hp1 HG02004.hp1 HG03017.hp1 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0066 a0001c0001t0001g0088 others(2): Show a0001c0001t0001g0021 a0001c0001t0001g0066 a0001c0001t0001g0088 a0001c0001t0001g0097 a0001c0001t0001g0105	5	364	0.0137	20	c.816 others(35): Show c.816+646_816+647insCATACATACATACATACATA	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	8/14			chr1	TogoVar
LIN9_chr1_226226157_226314164	226267318	A A	ATATGTAT others(13): Show ATATGTATGTATGTATGTATG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00438.hp2 others(92): Show HG00099.hp2 HG00423.hp1 HG00438.hp2 HG00597.hp1 HG00673.hp1 HG00741.hp1 HG01099.hp1 HG01106.hp1 HG01168.hp2 HG01516.hp1 HG01891.hp1 HG01993.hp1 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03209.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03831.hp1 NA18906.hp2 NA18941.hp2 NA18947.hp2 NA18949.hp2 NA18952.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp2 NA18972.hp2 NA18977.hp1 NA18977.hp2 NA18984.hp2 NA18986.hp2 NA18990.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA19001.hp1 NA19011.hp2 NA19030.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19076.hp1 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp2 NA19090.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0005 a0001c0001t0001g0069 a0001c0001t0001g0070 others(92): Show a0001c0001t0001g0005 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0128 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0241 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0252 a0001c0001t0001g0255 a0001c0001t0001g0280 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0316 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0322 a0001c0001t0001g0360 a0001c0001t0003g0037 a0001c0001t0003g0042 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0056 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0092 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0121 a0001c0001t0003g0157 a0001c0001t0003g0192	95	364	0.2610	20	c.816 others(35): Show c.816+619_816+638dupCATACATACATACATACATA	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	8/14			chr1	TogoVar
LINGO2_chr9_27932617_29218601	27981534	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02056.hp1 HG02027.hp2 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0017 a0001c0001t0001g0018	2	62	0.0323	20	c.-35 others(39): Show c.-35-30829_-35-30828insTTTTTTTTTTTTTTTTTTTT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	27999436	C C	CAGAGAGA others(13): Show CAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0051 a0001c0001t0021g0051	1	62	0.0161	20	c.-35 others(39): Show c.-35-48750_-35-48731dupCTCTCTCTCTCTCTCTCTCT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28189317	A A	AAGGGAGG others(13): Show AAGGGAGGGAGGAAGGAAGGG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02922.hp1 HG03130.hp1 HG02109.hp1 HG02922.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0010 a0001c0001t0008 a0001c0001t0010	a0001c0001t0008g0020 a0001c0001t0008g0040 a0001c0001t0010g0001 a0001c0001t0008g0020 a0001c0001t0008g0040 a0001c0001t0010g0001	3	62	0.0484	20	c.-36 others(41): Show c.-36+105890_-36+105891insCCCTTCCTTCCTCCCTCCCT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28233030	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0032 a0001c0001t0003g0032	1	62	0.0161	20	c.-36 others(39): Show c.-36+62158_-36+62177dupTATATATATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28233061	T T	TATATATA others(13): Show TATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0034 a0001c0001t0003g0034	1	62	0.0161	20	c.-36 others(39): Show c.-36+62146_-36+62147insTTATATATATATATATATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28384329	C C	CTATATAT others(13): Show CTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01074.hp1 NA19043.hp1 HG01074.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0029 a0001c0001t0012 a0001c0001t0029	a0001c0001t0012g0005 a0001c0001t0029g0024 a0001c0001t0012g0005 a0001c0001t0029g0024	2	62	0.0323	20	c.-22 others(41): Show c.-227-11481_-227-11462dupTATATATATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28433949	C C	CTCTCTAT others(13): Show CTCTCTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0052 a0001c0001t0002g0052	1	62	0.0161	20	c.-22 others(41): Show c.-228+41990_-228+41991insTATATATATATATATAGAGA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28433949	C C	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTATATA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	62	0.0161	20	c.-22 others(41): Show c.-228+41990_-228+41991insTATATAGAGAGAGAGAGAGA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28561567	T T	TATATAAT others(13): Show TATATAATATAATGTATTTAG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG01074.hp2 others(11): Show HG00438.hp2 HG00597.hp2 HG01074.hp2 HG02027.hp2 HG02109.hp1 HG02109.hp2 HG02451.hp1 HG02630.hp1 HG02809.hp1 HG02895.hp1 HG02897.hp2 HG03209.hp2 HG03486.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0018 a0001c0001t0019 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0034 a0001c0003t0009	a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0041 others(11): Show a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0041 a0001c0001t0003g0034 a0001c0001t0005g0057 a0001c0001t0010g0001 a0001c0001t0018g0015 a0001c0001t0019g0053 a0001c0001t0024g0027 a0001c0001t0025g0055 a0001c0001t0026g0013 a0001c0001t0027g0030 a0001c0001t0034g0061 a0001c0003t0009g0036	14	62	0.2258	20	c.-31 others(41): Show c.-313-85543_-313-85542insCTAAATACATTATATTATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28561589	T T	TATAATAT others(13): Show TATAATATAATGTGTTTAAAG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0002 a0001c0001t0011g0002	1	62	0.0161	20	c.-31 others(41): Show c.-313-85565_-313-85564insCTTTAAACACATTATATTAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28632884	A A	ATATATAT others(13): Show ATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0022 a0001c0001t0004g0022	1	62	0.0161	20	c.-31 others(41): Show c.-314+37315_-314+37316insCATATATATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28708761	T T	TTATCTAT others(13): Show TTATCTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG01071.hp1 others(8): Show HG00639.hp1 HG00642.hp1 HG01071.hp1 HG01074.hp2 HG01261.hp1 HG02056.hp1 HG02922.hp1 HG03130.hp2 HG03209.hp2 HG03486.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0012 a0001c0001t0016 a0001c0001t0023 a0001c0001t0026 a0001c0004t0005	a0001c0001t0001g0017 a0001c0001t0001g0046 a0001c0001t0001g0047 others(8): Show a0001c0001t0001g0017 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0004g0022 a0001c0001t0005g0057 a0001c0001t0008g0020 a0001c0001t0012g0005 a0001c0001t0016g0011 a0001c0001t0023g0037 a0001c0001t0026g0013 a0001c0004t0005g0054	11	62	0.1774	20	c.-39 others(41): Show c.-394-38501_-394-38482dupGATAGATAGATAGATAGATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28714188	T T	TATATATA others(13): Show TATATATATACACACACACAC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0002 a0001c0001t0011g0002	1	62	0.0161	20	c.-39 others(41): Show c.-394-43909_-394-43908insGTGTGTGTGTGTATATATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28744609	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG03209.hp2 HG06807.hp2 others(1): Show HG00741.hp1 HG03209.hp2 HG06807.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007	a0001c0001t0001g0019 a0001c0001t0002g0014 a0001c0001t0005g0057 others(1): Show a0001c0001t0001g0019 a0001c0001t0002g0014 a0001c0001t0005g0057 a0001c0001t0007g0009	4	62	0.0645	20	c.-39 others(41): Show c.-394-74349_-394-74330dupACACACACACACACACACAC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28797359	T T	TATAGAGA others(13): Show TATAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	62	0.0161	20	c.-39 others(43): Show c.-394-127080_-394-127079insCTCTCTCTCTCTCTCTCTAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28837649	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA19060.hp2 HG03209.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0049 a0001c0001t0004g0039 a0001c0001t0003g0049 a0001c0001t0004g0039	2	62	0.0323	20	c.-39 others(43): Show c.-395+110168_-395+110169insATATATATATATATATATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28883628	G G	GTGTGTAT others(13): Show GTGTGTATGTATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG06807.hp2 HG00741.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0001 a0001c0001t0015	a0001c0001t0001g0019 a0001c0001t0015g0012 a0001c0001t0001g0019 a0001c0001t0015g0012	2	62	0.0323	20	c.-39 others(41): Show c.-395+64189_-395+64190insTATATATATATACATACACA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28932107	A A	AAAAATAA others(13): Show AAAAATAAAATAAAATAAAAT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02809.hp2 HG02895.hp1 others(9): Show HG02630.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03139.hp1 HG03209.hp2 NA18990.hp2 NA19043.hp1 NA19060.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0022 a0001c0001t0024 a0001c0001t0027 a0001c0001t0034	a0001c0001t0002g0014 a0001c0001t0002g0045 a0001c0001t0004g0033 others(9): Show a0001c0001t0002g0014 a0001c0001t0002g0045 a0001c0001t0004g0033 a0001c0001t0005g0057 a0001c0001t0006g0003 a0001c0001t0006g0004 a0001c0001t0011g0002 a0001c0001t0012g0005 a0001c0001t0022g0031 a0001c0001t0024g0027 a0001c0001t0027g0030 a0001c0001t0034g0061	12	62	0.1936	20	c.-39 others(41): Show c.-395+15691_-395+15710dupATTTTATTTTATTTTATTTT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	29072611	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0022 a0001c0001t0004g0022	1	62	0.0161	20	c.-49 others(43): Show c.-491-124698_-491-124697insTATATATATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LINGO3_chr19_2282164_2313154	2289273	G G	GTGTGTGT others(13): Show GTGTGTGTCCTGGGTGTGAGC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0055 a0001c0001t0055	a0001c0001t0055g0141 a0001c0001t0055g0141	1	418	0.0024	20	c.70 others(29): Show c.705_*724dupGCTCACACCCAGGACACACA	LINGO3	ENSG00000220008.4	transcript	ENST00000698372.1	protein_coding	2/2	724		chr19	TogoVar
LIPA_chr10_89208572_89256775	89213292	T T	TAAAGAAA others(13): Show TAAAGAAAAGAAAAGAAAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 HG04199.hp2 NA18950.hp1 others(7): Show HG02615.hp1 HG04199.hp2 NA18950.hp1 NA18972.hp2 NA18974.hp2 NA18990.hp2 NA19000.hp1 NA19009.hp1 NA19060.hp1 NA19072.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0025 a0001c0001t0001g0164 a0001c0001t0001g0176 others(7): Show a0001c0001t0001g0025 a0001c0001t0001g0164 a0001c0001t0001g0176 a0001c0001t0001g0228 a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0101 a0003c0003t0001g0029 a0003c0003t0001g0318 a0003c0003t0001g0327	10	384	0.0260	20	c.15 others(31): Show c.1535_*1536insTCTTTTCTTTTCTTTTCTTT	LIPA	ENSG00000107798.18	transcript	ENST00000336233.10	protein_coding		279		chr10	TogoVar
LIPC_chr15_58426991_58574844	58489217	C C	CGGGGGGG others(13): Show CGGGGGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0067 a0001c0009t0002g0067	1	358	0.0028	20	c.89- others(37): Show c.89-49111_89-49110insGGGGGGGGGGGGGGGGGGGG	LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPC_chr15_58426991_58574844	58496743	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00609.hp1 others(46): Show HG00099.hp1 HG00423.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG01081.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG02071.hp2 HG02132.hp1 HG02135.hp2 HG02257.hp1 HG02280.hp2 HG02559.hp1 HG02602.hp2 HG02683.hp1 HG02698.hp1 HG02738.hp1 HG02897.hp1 HG03139.hp1 HG03139.hp2 HG03239.hp2 HG03688.hp1 HG03704.hp2 HG03927.hp2 NA18943.hp2 NA18950.hp2 NA18951.hp1 NA18954.hp2 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18968.hp2 NA18977.hp2 NA18986.hp1 NA19000.hp2 NA19004.hp2 NA19011.hp1 NA19030.hp2 NA19063.hp2 NA19066.hp2 NA19084.hp1 NA19086.hp1 NA19087.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0007 a0001c0009 a0001c0016 a0002c0004 a0002c0006 a0002c0012 a0002c0013 a0003c0010 a0003c0034 a0004c0008 a0004c0018 a0004c0020 a0005c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 a0001c0003t0001 a0001c0005t0003 a0001c0007t0003 a0001c0007t0007 a0001c0009t0001 a0001c0009t0002 a0001c0016t0001 a0002c0004t0002 a0002c0006t0001 a0002c0006t0002 a0002c0012t0001 a0002c0013t0001 a0002c0013t0002 a0003c0010t0001 a0003c0010t0002 a0003c0034t0001 a0004c0008t0002 a0004c0018t0002 a0004c0020t0002 a0005c0014t0002	a0001c0001t0001g0105 a0001c0001t0001g0339 a0001c0001t0002g0236 others(46): Show a0001c0001t0001g0105 a0001c0001t0001g0339 a0001c0001t0002g0236 a0001c0001t0008g0078 a0001c0002t0001g0159 a0001c0002t0001g0251 a0001c0002t0001g0310 a0001c0003t0001g0113 a0001c0003t0001g0283 a0001c0003t0001g0306 a0001c0005t0003g0018 a0001c0005t0003g0129 a0001c0005t0003g0139 a0001c0005t0003g0223 a0001c0005t0003g0263 a0001c0005t0003g0315 a0001c0007t0003g0167 a0001c0007t0003g0222 a0001c0007t0003g0240 a0001c0007t0003g0242 a0001c0007t0003g0276 a0001c0007t0007g0137 a0001c0009t0001g0046 a0001c0009t0002g0106 a0001c0016t0001g0001 a0002c0004t0002g0023 a0002c0004t0002g0057 a0002c0004t0002g0225 a0002c0004t0002g0346 a0002c0004t0002g0356 a0002c0006t0001g0219 a0002c0006t0002g0253 a0002c0006t0002g0273 a0002c0012t0001g0252 a0002c0013t0001g0250 a0002c0013t0001g0327 a0002c0013t0001g0342 a0002c0013t0002g0248 a0003c0010t0001g0114 a0003c0010t0001g0175 a0003c0010t0001g0243 a0003c0010t0002g0133 a0003c0034t0001g0164 a0004c0008t0002g0130 a0004c0008t0002g0221 a0004c0008t0002g0357 a0004c0018t0002g0004 a0004c0020t0002g0021 a0005c0014t0002g0005	49	358	0.1369	20	c.89- others(37): Show c.89-41573_89-41572insAAAAAAAAAAAAAAAAAAAA	LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPC_chr15_58426991_58574844	58515533	C C	CACATATA others(13): Show CACATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0004 a0004	a0004c0018 a0004c0018	a0004c0018t0002 a0004c0018t0002	a0004c0018t0002g0004 a0004c0018t0002g0004	1	358	0.0028	20	c.89- others(37): Show c.89-22799_89-22798insCATATATATATATATATATA	LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPC_chr15_58426991_58574844	58515533	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0199 a0001c0001t0002g0199	1	358	0.0028	20	c.89- others(37): Show c.89-22799_89-22780dupATATATATATATATATATAT	LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPG_chr18_49557057_49604185	49558431	T T	TTCTCTCT others(13): Show TTCTCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01167.hp1 HG02809.hp2 others(3): Show HG00642.hp2 HG01167.hp1 HG02809.hp2 HG03579.hp2 HG03942.hp1 NA19030.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0006 a0001c0001 a0002c0002 a0004c0006	a0001c0001t0017 a0001c0001t0053 a0001c0001t0084 others(3): Show a0001c0001t0017 a0001c0001t0053 a0001c0001t0084 a0002c0002t0021 a0002c0002t0028 a0004c0006t0029	a0001c0001t0017g0285 a0001c0001t0053g0338 a0001c0001t0084g0258 others(3): Show a0001c0001t0017g0285 a0001c0001t0053g0338 a0001c0001t0084g0258 a0002c0002t0021g0378 a0002c0002t0028g0354 a0004c0006t0029g0266	6	384	0.0156	20	c.-38 others(31): Show c.-3878_-3877insTCTCTCTCTCTCTCTCTCTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding		3625		chr18	TogoVar
LIPG_chr18_49557057_49604185	49558463	C C	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTCTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 NA19240.hp1 HG02965.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0123 a0001c0001t0003 a0001c0001t0123	a0001c0001t0003g0011 a0001c0001t0123g0012 a0001c0001t0003g0011 a0001c0001t0123g0012	2	384	0.0052	20	c.-38 others(31): Show c.-3846_-3845insTCTCTCTCTCTCTCTCTCCT	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding		3593		chr18	TogoVar
LIPG_chr18_49557057_49604185	49579743	T T	TCTTTCCT others(13): Show TCTTTCCTTTCCTTTCCTTTC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01069.hp2 HG01071.hp2 others(6): Show HG00099.hp2 HG01069.hp2 HG01071.hp2 HG01934.hp1 HG02735.hp1 NA18966.hp2 NA19012.hp1 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0008 a0001c0001t0055 others(3): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0055 a0001c0001t0061 a0001c0001t0101 a0001c0001t0108	a0001c0001t0006g0042 a0001c0001t0008g0002 a0001c0001t0008g0193 others(5): Show a0001c0001t0006g0042 a0001c0001t0008g0002 a0001c0001t0008g0193 a0001c0001t0008g0196 a0001c0001t0055g0326 a0001c0001t0061g0036 a0001c0001t0101g0191 a0001c0001t0108g0153	9	384	0.0234	20	c.794 others(37): Show c.794-1666_794-1647dupCTTTCCTTTCCTTTCCTTTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	C C	CTTTCCTT others(13): Show CTTTCCTTTCCTTTCCTTTCT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02886.hp2 HG03017.hp1 others(1): Show HG01891.hp1 HG02886.hp2 HG03017.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0044 a0001c0003t0045 others(1): Show a0001c0001t0003 a0001c0001t0044 a0001c0003t0045 a0001c0003t0099	a0001c0001t0003g0017 a0001c0001t0044g0035 a0001c0003t0045g0201 others(1): Show a0001c0001t0003g0017 a0001c0001t0044g0035 a0001c0003t0045g0201 a0001c0003t0099g0198	4	384	0.0104	20	c.794 others(37): Show c.794-1647_794-1646insCTTTCCTTTCCTTTCTTTTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	C C	CTTTCCTT others(13): Show CTTTCCTTTCCTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG03688.hp2 HG01934.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0006 a0001c0001t0003 a0001c0001t0006	a0001c0001t0003g0041 a0001c0001t0006g0034 a0001c0001t0003g0041 a0001c0001t0006g0034	2	384	0.0052	20	c.794 others(37): Show c.794-1647_794-1646insCTTTCCTTTCTTTTCTTTTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	C C	CTTTCCTT others(13): Show CTTTCCTTTCTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02109.hp1 HG00323.hp2 HG02109.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0131 a0003c0004t0016 a0001c0001t0131 a0003c0004t0016	a0001c0001t0131g0279 a0003c0004t0016g0145 a0001c0001t0131g0279 a0003c0004t0016g0145	2	384	0.0052	20	c.794 others(37): Show c.794-1647_794-1646insCTTTCTTTTCTTTTCTTTTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	C C	CTTTCTTT others(13): Show CTTTCTTTTCTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01361.hp1 HG02040.hp2 others(4): Show HG00609.hp1 HG01361.hp1 HG02040.hp2 NA18906.hp1 NA18954.hp2 NA18982.hp1 NA19082.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0006 a0001c0001t0013 a0001c0001t0043 others(2): Show a0001c0001t0006 a0001c0001t0013 a0001c0001t0043 a0001c0001t0127 a0003c0004t0016	a0001c0001t0006g0079 a0001c0001t0013g0106 a0001c0001t0013g0131 others(4): Show a0001c0001t0006g0079 a0001c0001t0013g0106 a0001c0001t0013g0131 a0001c0001t0043g0114 a0001c0001t0043g0252 a0001c0001t0127g0050 a0003c0004t0016g0146	7	384	0.0182	20	c.794 others(37): Show c.794-1613_794-1594dupTCTTTTCTTTTCTTTTCTTT	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPH_chr3_185501262_185557588	185528323	G G	GAAGAAAG others(13): Show GAAGAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00280.hp2 others(109): Show HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00544.hp2 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG01069.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp1 HG01175.hp1 HG01256.hp1 HG01257.hp1 HG01361.hp1 HG01361.hp2 HG01891.hp1 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02165.hp2 HG02273.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02735.hp1 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG03017.hp2 HG03139.hp2 HG03209.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG03654.hp2 HG03669.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18949.hp1 NA18950.hp2 NA18953.hp1 NA18953.hp2 NA18959.hp1 NA18961.hp2 NA18962.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18973.hp1 NA18973.hp2 NA18978.hp2 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18995.hp1 NA19000.hp2 NA19001.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp2 NA19043.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp2 NA19085.hp1 NA19086.hp1 NA20129.hp1	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0006	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0003c0010 a0005c0007 a0006c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(26): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0021 a0001c0001t0022 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0001t0034 a0001c0001t0035 a0001c0001t0037 a0001c0002t0001 a0001c0002t0004 a0001c0002t0013 a0001c0002t0016 a0001c0004t0001 a0003c0010t0001 a0005c0007t0009 a0006c0008t0002	a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0012 others(107): Show a0001c0001t0002g0001 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0035 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0070 a0001c0001t0002g0115 a0001c0001t0002g0118 a0001c0001t0002g0120 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0182 a0001c0001t0002g0186 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0204 a0001c0001t0002g0213 a0001c0001t0002g0266 a0001c0001t0002g0276 a0001c0001t0003g0007 a0001c0001t0003g0020 a0001c0001t0003g0030 a0001c0001t0003g0052 a0001c0001t0003g0113 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0190 a0001c0001t0003g0291 a0001c0001t0003g0307 a0001c0001t0003g0341 a0001c0001t0005g0123 a0001c0001t0005g0325 a0001c0001t0006g0036 a0001c0001t0006g0148 a0001c0001t0006g0150 a0001c0001t0006g0155 a0001c0001t0006g0166 a0001c0001t0006g0203 a0001c0001t0006g0289 a0001c0001t0007g0053 a0001c0001t0007g0054 a0001c0001t0007g0176 a0001c0001t0007g0194 a0001c0001t0008g0149 a0001c0001t0008g0168 a0001c0001t0009g0161 a0001c0001t0009g0169 a0001c0001t0009g0251 a0001c0001t0009g0252 a0001c0001t0010g0022 a0001c0001t0010g0023 a0001c0001t0010g0049 a0001c0001t0010g0080 a0001c0001t0010g0102 a0001c0001t0011g0026 a0001c0001t0011g0144 a0001c0001t0012g0050 a0001c0001t0013g0198 a0001c0001t0014g0157 a0001c0001t0014g0177 a0001c0001t0015g0165 a0001c0001t0021g0061 a0001c0001t0022g0090 a0001c0001t0022g0146 a0001c0001t0029g0047 a0001c0001t0030g0152 a0001c0001t0032g0137 a0001c0001t0034g0011 a0001c0001t0035g0195 a0001c0001t0037g0272 a0001c0002t0001g0009 a0001c0002t0001g0092 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0153 a0001c0002t0001g0211 a0001c0002t0001g0240 a0001c0002t0001g0274 a0001c0002t0001g0277 a0001c0002t0001g0279 a0001c0002t0001g0293 a0001c0002t0001g0295 a0001c0002t0001g0327 a0001c0002t0001g0328 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0001g0333 a0001c0002t0001g0334 a0001c0002t0001g0340 a0001c0002t0001g0346 a0001c0002t0001g0347 a0001c0002t0004g0058 a0001c0002t0004g0124 a0001c0002t0004g0323 a0001c0002t0013g0210 a0001c0002t0016g0002 a0001c0004t0001g0337 a0003c0010t0001g0253 a0005c0007t0009g0145 a0006c0008t0002g0265	112	358	0.3129	20	c.527 others(35): Show c.527-758_527-739dupTCTTTCTTTCTTTCTTTCTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185528351	A A	AAAGAAAG others(13): Show AAAGAAAGAAAGAAAGAAAGC	intron_variant intron_variant	MODIFIER	NA19002.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	358	0.0028	20	c.527 others(35): Show c.527-767_527-766insGCTTTCTTTCTTTCTTTCTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185528355	A A	AAAGAAAG others(13): Show AAAGAAAGAAAGAAAGAAAGC	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0183 a0001c0001t0003g0183	1	358	0.0028	20	c.527 others(35): Show c.527-771_527-770insGCTTTCTTTCTTTCTTTCTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185529906	A A	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02896.hp1 HG02897.hp1 others(1): Show HG02257.hp2 HG02896.hp1 HG02897.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001	a0001c0001t0002g0096 a0001c0001t0003g0095 a0001c0002t0001g0088 others(1): Show a0001c0001t0002g0096 a0001c0001t0003g0095 a0001c0002t0001g0088 a0001c0002t0001g0304	4	358	0.0112	20	c.527 others(37): Show c.527-2341_527-2322dupCTTTCTTTCTTTCTTTCTTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar

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