Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LOXHD1_chr18_46472273_46662220	46574388	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00609.hp2 HG00738.hp2 others(14): Show HG00140.hp2 HG00609.hp2 HG00738.hp2 HG01106.hp1 HG01258.hp2 HG01978.hp1 HG02132.hp2 HG02145.hp2 HG02155.hp1 HG02293.hp2 HG02922.hp1 HG03688.hp2 NA18747.hp1 NA18951.hp1 NA18969.hp1 NA18990.hp2 NA19070.hp2	a0002 a0003 a0004 others(5): Show a0002 a0003 a0004 a0010 a0011 a0039 a0046 a0053	a0002c0002 a0002c0035 a0002c0051 others(7): Show a0002c0002 a0002c0035 a0002c0051 a0003c0003 a0004c0004 a0010c0008 a0011c0011 a0039c0060 a0046c0066 a0053c0030	a0002c0002t0001 a0002c0035t0001 a0002c0051t0001 others(7): Show a0002c0002t0001 a0002c0035t0001 a0002c0051t0001 a0003c0003t0001 a0004c0004t0001 a0010c0008t0001 a0011c0011t0001 a0039c0060t0001 a0046c0066t0001 a0053c0030t0002	a0002c0002t0001g0072 a0002c0002t0001g0091 a0002c0002t0001g0134 others(14): Show a0002c0002t0001g0072 a0002c0002t0001g0091 a0002c0002t0001g0134 a0002c0002t0001g0179 a0002c0002t0001g0226 a0002c0002t0001g0233 a0002c0002t0001g0252 a0002c0035t0001g0080 a0002c0051t0001g0263 a0003c0003t0001g0152 a0003c0003t0001g0199 a0004c0004t0001g0095 a0010c0008t0001g0247 a0011c0011t0001g0210 a0039c0060t0001g0236 a0046c0066t0001g0177 a0053c0030t0002g0007	17	270	0.0630	20	c.197 others(39): Show c.1971-2246_1971-2227dupGTGTGTGTGTGTGTGTGTGT	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	14/40			chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46608035	G G	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01496.hp2 HG02572.hp1 others(3): Show HG00423.hp2 HG01496.hp2 HG02572.hp1 HG03098.hp1 HG03195.hp1 NA18993.hp1	a0001 a0008 a0015 others(3): Show a0001 a0008 a0015 a0026 a0029 a0050	a0001c0001 a0008c0018 a0015c0020 others(3): Show a0001c0001 a0008c0018 a0015c0020 a0026c0041 a0029c0042 a0050c0036	a0001c0001t0001 a0008c0018t0001 a0015c0020t0001 others(3): Show a0001c0001t0001 a0008c0018t0001 a0015c0020t0001 a0026c0041t0001 a0029c0042t0001 a0050c0036t0001	a0001c0001t0001g0074 a0008c0018t0001g0124 a0015c0020t0001g0163 others(3): Show a0001c0001t0001g0074 a0008c0018t0001g0124 a0015c0020t0001g0163 a0026c0041t0001g0166 a0029c0042t0001g0132 a0050c0036t0001g0047	6	270	0.0222	20	c.759 others(37): Show c.759+2721_759+2740dupTTCCTTCCTTCCTTCCTTCC	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	6/40			chr18	TogoVar
LOXL1_chr15_73921462_73957136	73938275	G G	GTATCTAT others(13): Show GTATCTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02280.hp1 HG03490.hp2 others(8): Show HG00741.hp1 HG02280.hp1 HG03490.hp2 HG03492.hp1 NA18957.hp2 NA18984.hp2 NA18988.hp1 NA18993.hp1 NA18998.hp1 NA19084.hp2 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0003 a0001c0002 a0002c0001 a0003c0003	a0001c0002t0002 a0002c0001t0001 a0002c0001t0002 others(1): Show a0001c0002t0002 a0002c0001t0001 a0002c0001t0002 a0003c0003t0003	a0001c0002t0002g0268 a0001c0002t0002g0288 a0002c0001t0001g0032 others(6): Show a0001c0002t0002g0268 a0001c0002t0002g0288 a0002c0001t0001g0032 a0002c0001t0001g0182 a0002c0001t0001g0238 a0002c0001t0002g0037 a0002c0001t0002g0236 a0003c0003t0003g0128 a0003c0003t0003g0144	11	448	0.0246	20	c.110 others(39): Show c.1103-4556_1103-4537dupTCTATCTATCTATCTATCTA	LOXL1	ENSG00000129038.16	transcript	ENST00000261921.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr15	TogoVar
LOXL2_chr8_23291897_23409120	23328709	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03098.hp1 HG03516.hp2 HG02717.hp2 HG03098.hp1 HG03516.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0018 a0002c0010 a0008c0038 a0001c0018 a0002c0010 a0008c0038	a0001c0018t0001 a0002c0010t0002 a0008c0038t0001 a0001c0018t0001 a0002c0010t0002 a0008c0038t0001	a0001c0018t0001g0265 a0002c0010t0002g0153 a0008c0038t0001g0089 a0001c0018t0001g0265 a0002c0010t0002g0153 a0008c0038t0001g0089	3	348	0.0086	20	c.967 others(35): Show c.967-164_967-145dupCACACACACACACACACACA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	5/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23329530	T T	TGCATGTG others(13): Show TGCATGTGTGTGCATGCACAC	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02074.hp1 HG02080.hp1 others(28): Show HG00609.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02148.hp1 HG03704.hp2 NA18942.hp1 NA18946.hp2 NA18947.hp1 NA18952.hp1 NA18955.hp2 NA18962.hp2 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18977.hp2 NA18990.hp1 NA19004.hp1 NA19009.hp1 NA19054.hp1 NA19056.hp1 NA19057.hp2 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp2 NA19072.hp2 NA19077.hp2 NA19079.hp1 NA19080.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0033 a0001c0034 a0001c0035 others(5): Show a0001c0033 a0001c0034 a0001c0035 a0002c0006 a0002c0009 a0002c0026 a0002c0051 a0004c0052	a0001c0033t0002 a0001c0034t0003 a0001c0035t0002 others(8): Show a0001c0033t0002 a0001c0034t0003 a0001c0035t0002 a0002c0006t0001 a0002c0006t0002 a0002c0006t0003 a0002c0009t0002 a0002c0009t0003 a0002c0026t0002 a0002c0051t0003 a0004c0052t0002	a0001c0033t0002g0236 a0001c0034t0003g0218 a0001c0035t0002g0240 others(28): Show a0001c0033t0002g0236 a0001c0034t0003g0218 a0001c0035t0002g0240 a0002c0006t0001g0222 a0002c0006t0002g0036 a0002c0006t0002g0041 a0002c0006t0002g0225 a0002c0006t0002g0227 a0002c0006t0002g0228 a0002c0006t0002g0229 a0002c0006t0002g0231 a0002c0006t0002g0234 a0002c0006t0002g0235 a0002c0006t0002g0239 a0002c0006t0002g0243 a0002c0006t0002g0344 a0002c0006t0003g0219 a0002c0006t0003g0230 a0002c0009t0002g0004 a0002c0009t0002g0095 a0002c0009t0002g0098 a0002c0009t0002g0123 a0002c0009t0002g0128 a0002c0009t0002g0144 a0002c0009t0002g0274 a0002c0009t0002g0283 a0002c0009t0003g0241 a0002c0026t0002g0223 a0002c0026t0002g0224 a0002c0051t0003g0113 a0004c0052t0002g0007	31	348	0.0891	20	c.967 others(35): Show c.967-966_967-965insGTGTGCATGCACACACATGC	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	5/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23352993	A A	AGGTGGGG others(13): Show AGGTGGGGTGGGGTGGGGAGG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01175.hp2 HG02293.hp2 HG00735.hp1 HG01175.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0013 a0001c0003t0001 a0001c0001t0001 a0001c0001t0013 a0001c0003t0001	a0001c0001t0001g0323 a0001c0001t0013g0343 a0001c0003t0001g0313 a0001c0001t0001g0323 a0001c0001t0013g0343 a0001c0003t0001g0313	3	348	0.0086	20	c.531 others(37): Show c.531+7077_531+7096dupCCTCCCCACCCCACCCCACC	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23354588	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18984.hp1 NA19009.hp2 others(1): Show NA18951.hp1 NA18984.hp1 NA19009.hp2 NA19012.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0002c0004 a0001c0001 a0001c0008 a0002c0004	a0001c0001t0002 a0001c0008t0005 a0002c0004t0003 a0001c0001t0002 a0001c0008t0005 a0002c0004t0003	a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0008t0005g0175 others(1): Show a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0008t0005g0175 a0002c0004t0003g0295	4	348	0.0115	20	c.531 others(37): Show c.531+5501_531+5502insCACACACACACACACACACA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LOXL4_chr10_98242690_98273194	98268404	C C	CGGGGGGC others(13): Show CGGGGGGCGGGGGGAGCGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01192.hp1 HG02897.hp2 others(2): Show HG00642.hp2 HG01192.hp1 HG02897.hp2 NA18949.hp2 NA18951.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0002 a0001c0002t0011 a0003c0005t0012 a0001c0002t0002 a0001c0002t0011 a0003c0005t0012	a0001c0002t0002g0003 a0001c0002t0002g0035 a0001c0002t0002g0091 others(2): Show a0001c0002t0002g0003 a0001c0002t0002g0035 a0001c0002t0002g0091 a0001c0002t0011g0078 a0003c0005t0012g0083	5	438	0.0114	20	c.-30 others(29): Show c.-306_-305insCCCCGCTCCCCCCGCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		211		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268404	C C	CGGGGGGC others(13): Show CGGGGGGCGGGGGGGAGCGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG02738.hp2 HG00597.hp1 HG02738.hp2	a0001 a0003 a0001 a0003	a0001c0004 a0003c0005 a0001c0004 a0003c0005	a0001c0004t0001 a0003c0005t0002 a0001c0004t0001 a0003c0005t0002	a0001c0004t0001g0038 a0003c0005t0002g0011 a0001c0004t0001g0038 a0003c0005t0002g0011	2	438	0.0046	20	c.-30 others(29): Show c.-306_-305insCCCGCTCCCCCCCGCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		211		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268411	C C	CGGGGGGA others(13): Show CGGGGGGAGCGGGGGGGGCGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp2 NA19006.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0011 a0003c0005t0002g0011	1	438	0.0023	20	c.-31 others(29): Show c.-313_-312insCCGCCCCCCCCGCTCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		218		chr10	TogoVar
LOXL4_chr10_98242690_98273194	98268420	C C	CGGGGGGG others(13): Show CGGGGGGGGGCGGGGGGAGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0074 a0001c0002t0002g0074	1	438	0.0023	20	c.-32 others(29): Show c.-322_-321insCGCTCCCCCCGCCCCCCCCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		227		chr10	TogoVar
LPAR1_chr9_110868263_111043470	110892826	A A	AAGGAAGG others(13): Show AAGGAAGGAAGGAAGGCAGGC	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0145 a0001c0001t0002g0145	1	302	0.0033	20	c.794 others(39): Show c.794-17105_794-17104insGCCTGCCTTCCTTCCTTCCT	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	110909729	G G	GTATTTAT others(13): Show GTATTTATTTATTTATTTATT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0010 a0001c0001t0006g0010	1	302	0.0033	20	c.793 others(39): Show c.793+31672_793+31691dupAATAAATAAATAAATAAATA	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5			chr9	TogoVar
LPAR3_chr1_84806602_84898206	84813158	T T	TATATATA others(13): Show TATATATATAGAGAGAGAGAG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0087	a0001c0001t0087g0101 a0001c0001t0087g0101	1	382	0.0026	20	c.68 others(29): Show c.687_*688insCTCTCTCTCTCTATATATAT	LPAR3	ENSG00000171517.6	transcript	ENST00000370611.4	protein_coding	3/3	687		chr1	TogoVar
LPA_chr6_160526482_160669275	160553937	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02040.hp2 HG02132.hp2 others(4): Show HG00609.hp2 HG02040.hp2 HG02132.hp2 HG02738.hp1 HG03834.hp2 HG04228.hp1 NA19240.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0004c0046 others(1): Show a0002c0002 a0004c0004 a0004c0046 a0004c0051	a0002c0002t0003 a0004c0004t0001 a0004c0046t0002 others(1): Show a0002c0002t0003 a0004c0004t0001 a0004c0046t0002 a0004c0051t0001	a0002c0002t0003g0132 a0002c0002t0003g0148 a0004c0004t0001g0079 others(4): Show a0002c0002t0003g0132 a0002c0002t0003g0148 a0004c0004t0001g0079 a0004c0004t0001g0109 a0004c0004t0001g0110 a0004c0046t0002g0038 a0004c0051t0001g0054	7	148	0.0473	20	c.497 others(39): Show c.4973+2087_4973+2088insCACACACACACACACACACA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160553954	T T	TGTGTGTG others(13): Show TGTGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0001 a0003c0008t0001	a0003c0008t0001g0059 a0003c0008t0001g0059	1	148	0.0068	20	c.497 others(39): Show c.4973+2070_4973+2071insGCGCGCACACACACACACAC	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160553954	T T	TGTGTGTG others(13): Show TGTGTGTGTGTGTGTGTGCGC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01261.hp1 HG01361.hp2 others(9): Show HG00323.hp2 HG01261.hp1 HG01361.hp2 HG02074.hp1 HG02258.hp1 HG02451.hp1 HG03139.hp2 HG03710.hp1 NA18945.hp1 NA19043.hp1 NA19085.hp1 homoSapiens_chm13v2.hp1	a0003 a0008 a0012 others(1): Show a0003 a0008 a0012 a0029	a0003c0003 a0003c0008 a0003c0018 others(5): Show a0003c0003 a0003c0008 a0003c0018 a0003c0024 a0003c0048 a0008c0011 a0012c0054 a0029c0016	a0003c0003t0001 a0003c0003t0002 a0003c0008t0001 others(6): Show a0003c0003t0001 a0003c0003t0002 a0003c0008t0001 a0003c0018t0001 a0003c0024t0002 a0003c0048t0002 a0008c0011t0003 a0012c0054t0001 a0029c0016t0001	a0003c0003t0001g0082 a0003c0003t0001g0122 a0003c0003t0001g0123 others(9): Show a0003c0003t0001g0082 a0003c0003t0001g0122 a0003c0003t0001g0123 a0003c0003t0002g0025 a0003c0008t0001g0088 a0003c0018t0001g0081 a0003c0024t0002g0019 a0003c0048t0002g0026 a0008c0011t0003g0138 a0008c0011t0003g0140 a0012c0054t0001g0125 a0029c0016t0001g0060	12	148	0.0811	20	c.497 others(39): Show c.4973+2070_4973+2071insGCGCACACACACACACACAC	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160553954	T T	TGTGTGTG others(13): Show TGTGTGTGTGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG03041.hp2 HG00140.hp1 HG00408.hp1 HG03041.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0004 a0002c0002 a0003c0003 a0004c0004	a0002c0002t0003 a0003c0003t0001 a0004c0004t0001 a0002c0002t0003 a0003c0003t0001 a0004c0004t0001	a0002c0002t0003g0128 a0003c0003t0001g0084 a0004c0004t0001g0089 a0002c0002t0003g0128 a0003c0003t0001g0084 a0004c0004t0001g0089	3	148	0.0203	20	c.497 others(39): Show c.4973+2070_4973+2071insGCACACACACACACACACAC	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160555238	A A	AATTATAT others(13): Show AATTATATTATATTATATTAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0009 a0002c0002t0002g0009	1	148	0.0068	20	c.497 others(37): Show c.4973+767_4973+786dupATAATATAATATAATATAAT	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160555436	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0001 a0003c0008t0001	a0003c0008t0001g0088 a0003c0008t0001g0088	1	148	0.0068	20	c.497 others(37): Show c.4973+569_4973+588dupATATATATATATATATATAT	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPA_chr6_160526482_160669275	160555455	A A	ATATATAT others(13): Show ATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0086 a0003c0003t0001g0086	1	148	0.0068	20	c.497 others(37): Show c.4973+569_4973+570insCATATATATATATATATATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	30/38			chr6	TogoVar
LPCAT2_chr16_55504072_55591666	55587725	C C	CTGCCTGA others(13): Show CTGCCTGATTTATAGAATTTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00642.hp1 others(62): Show HG00408.hp1 HG00597.hp1 HG00642.hp1 HG01099.hp1 HG01106.hp2 HG01175.hp2 HG01261.hp2 HG01496.hp1 HG01975.hp1 HG02004.hp1 HG02040.hp1 HG02109.hp1 HG02132.hp1 HG02155.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02698.hp2 HG02723.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp2 HG03831.hp2 NA18940.hp2 NA18946.hp2 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18992.hp2 NA18995.hp1 NA19009.hp2 NA19030.hp1 NA19054.hp2 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19066.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0004c0006	a0001c0002t0005 a0001c0002t0007 a0001c0002t0017 others(22): Show a0001c0002t0005 a0001c0002t0007 a0001c0002t0017 a0001c0002t0035 a0001c0002t0036 a0001c0002t0040 a0001c0002t0043 a0001c0002t0046 a0001c0002t0050 a0001c0003t0021 a0001c0003t0034 a0001c0003t0071 a0002c0001t0005 a0002c0001t0018 a0002c0001t0027 a0002c0001t0033 a0002c0001t0035 a0002c0001t0048 a0002c0001t0049 a0002c0001t0057 a0002c0001t0061 a0002c0001t0065 a0002c0001t0067 a0004c0006t0023 a0004c0006t0047	a0001c0002t0005g0058 a0001c0002t0005g0203 a0001c0002t0007g0009 others(56): Show a0001c0002t0005g0058 a0001c0002t0005g0203 a0001c0002t0007g0009 a0001c0002t0007g0010 a0001c0002t0007g0216 a0001c0002t0007g0234 a0001c0002t0007g0236 a0001c0002t0007g0238 a0001c0002t0007g0240 a0001c0002t0007g0257 a0001c0002t0007g0261 a0001c0002t0007g0263 a0001c0002t0017g0220 a0001c0002t0017g0244 a0001c0002t0017g0245 a0001c0002t0017g0248 a0001c0002t0035g0198 a0001c0002t0036g0011 a0001c0002t0040g0235 a0001c0002t0043g0227 a0001c0002t0046g0229 a0001c0002t0050g0044 a0001c0003t0021g0060 a0001c0003t0021g0062 a0001c0003t0021g0064 a0001c0003t0034g0031 a0001c0003t0034g0046 a0001c0003t0071g0038 a0002c0001t0005g0003 a0002c0001t0005g0085 a0002c0001t0005g0087 a0002c0001t0005g0123 a0002c0001t0005g0125 a0002c0001t0005g0127 a0002c0001t0005g0129 a0002c0001t0005g0131 a0002c0001t0005g0133 a0002c0001t0005g0150 a0002c0001t0005g0151 a0002c0001t0005g0154 a0002c0001t0005g0155 a0002c0001t0005g0179 a0002c0001t0005g0181 a0002c0001t0018g0018 a0002c0001t0018g0020 a0002c0001t0018g0120 a0002c0001t0027g0014 a0002c0001t0033g0144 a0002c0001t0035g0164 a0002c0001t0048g0167 a0002c0001t0049g0107 a0002c0001t0057g0130 a0002c0001t0061g0006 a0002c0001t0065g0135 a0002c0001t0067g0140 a0004c0006t0023g0012 a0004c0006t0023g0088 a0004c0006t0023g0089 a0004c0006t0047g0012	65	314	0.2070	20	c.46 others(31): Show c.4627_*4628insTGCCTGATTTATAGAATTTA	LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding		1060		chr16	TogoVar
LPCAT4_chr15_34353633_34372196	34371786	G G	GGGGAGAG others(13): Show GGGGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 NA18941.hp1 NA18941.hp2 others(7): Show HG02155.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp2 NA18947.hp2 NA18971.hp2 NA18995.hp2 NA19056.hp2 NA19074.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0004 a0001c0001t0001g0029 a0001c0001t0001g0035 others(2): Show a0001c0001t0001g0004 a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0133 a0001c0001t0002g0076	10	450	0.0222	20	c.-46 others(31): Show c.-4687_-4686insTCTCTCTCTCTCTCTCTCCC	LPCAT4	ENSG00000176454.15	transcript	ENST00000314891.11	protein_coding		4591		chr15	TogoVar
LPGAT1_chr1_211738457_211835763	211808078	A A	ACTCTCGG others(13): Show ACTCTCGGCTGGGCGCAGCAG	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp1 HG00597.hp2 others(49): Show HG00423.hp2 HG00544.hp1 HG00597.hp2 HG00609.hp1 HG00733.hp1 HG00738.hp1 HG01074.hp2 HG01255.hp2 HG01261.hp1 HG01433.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02027.hp2 HG02293.hp2 HG02523.hp2 HG02698.hp2 HG02723.hp2 HG03017.hp2 HG03491.hp1 HG03669.hp1 HG03710.hp2 HG04115.hp2 HG04184.hp1 NA18747.hp2 NA18939.hp2 NA18950.hp1 NA18951.hp1 NA18966.hp1 NA18972.hp2 NA18980.hp2 NA18986.hp2 NA18990.hp1 NA18998.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19009.hp1 NA19012.hp2 NA19054.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19077.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 others(4): Show a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0014 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034	a0001c0001t0004g0001 a0001c0001t0004g0007 a0001c0001t0004g0022 others(37): Show a0001c0001t0004g0001 a0001c0001t0004g0007 a0001c0001t0004g0022 a0001c0001t0004g0286 a0001c0001t0004g0287 a0001c0001t0004g0288 a0001c0001t0004g0289 a0001c0001t0004g0290 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0293 a0001c0001t0004g0294 a0001c0001t0004g0295 a0001c0001t0004g0296 a0001c0001t0004g0298 a0001c0001t0004g0300 a0001c0001t0006g0017 a0001c0001t0006g0018 a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0228 a0001c0001t0006g0230 a0001c0001t0006g0231 a0001c0001t0006g0232 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0001t0006g0235 a0001c0001t0006g0236 a0001c0001t0006g0238 a0001c0001t0009g0010 a0001c0001t0009g0011 a0001c0001t0009g0084 a0001c0001t0009g0085 a0001c0001t0009g0087 a0001c0001t0014g0285 a0001c0001t0014g0297 a0001c0001t0014g0299 a0001c0001t0032g0086 a0001c0001t0033g0237 a0001c0001t0034g0229	52	332	0.1566	20	c.239 others(39): Show c.239-14889_239-14888insCTGCTGCGCCCAGCCGAGAG	LPGAT1	ENSG00000123684.13	transcript	ENST00000366997.9	protein_coding	2/7			chr1	TogoVar
LPIN1_chr2_11741632_11832409	11787392	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0005 a0001c0008t0005	a0001c0008t0005g0002 a0001c0008t0005g0002	1	278	0.0036	20	c.164 others(37): Show c.1643+230_1643+231insTTTTTTTTTTTTTTTTTTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	2956311	G G	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0091 a0001c0001t0091	a0001c0001t0091g0141 a0001c0001t0091g0141	1	380	0.0026	20	c.193 others(37): Show c.193-1732_193-1713dupACACACACACACACACACAC	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	2958141	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02735.hp1 NA18973.hp2 others(1): Show HG02129.hp2 HG02735.hp1 NA18973.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 a0001c0001t0024	a0001c0001t0001g0085 a0001c0001t0003g0040 a0001c0001t0017g0277 others(1): Show a0001c0001t0001g0085 a0001c0001t0003g0040 a0001c0001t0017g0277 a0001c0001t0024g0210	4	380	0.0105	20	c.192 others(37): Show c.192+2507_192+2508insTTTTTTTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPL_chr8_19934253_19972259	19950879	G G	GAGGAAGG others(13): Show GAGGAAGGAAGGAAGGAATGA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00423.hp2 others(56): Show HG00323.hp2 HG00408.hp1 HG00423.hp2 HG00558.hp1 HG00597.hp1 HG00733.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01106.hp1 HG01123.hp2 HG01257.hp1 HG01358.hp1 HG02027.hp2 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02145.hp2 HG02258.hp2 HG02300.hp2 HG02523.hp2 HG02698.hp2 HG02735.hp1 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03491.hp1 HG04204.hp1 HG04228.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp2 NA18953.hp1 NA18964.hp1 NA18965.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp2 NA18987.hp2 NA18988.hp1 NA18995.hp2 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp2 NA19072.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0009	a0001c0001 a0001c0002 a0001c0003 others(13): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0010 a0001c0011 a0001c0016 a0001c0038 a0001c0053 a0001c0058 a0002c0004 a0002c0007 a0003c0018 a0003c0020 a0003c0026 a0009c0066	a0001c0001t0001 a0001c0002t0002 a0001c0003t0003 others(16): Show a0001c0001t0001 a0001c0002t0002 a0001c0003t0003 a0001c0005t0001 a0001c0005t0008 a0001c0010t0001 a0001c0011t0002 a0001c0016t0008 a0001c0038t0003 a0001c0053t0001 a0001c0058t0005 a0002c0004t0004 a0002c0004t0025 a0002c0007t0004 a0003c0018t0009 a0003c0018t0020 a0003c0020t0007 a0003c0026t0008 a0009c0066t0004	a0001c0001t0001g0049 a0001c0001t0001g0144 a0001c0001t0001g0238 others(42): Show a0001c0001t0001g0049 a0001c0001t0001g0144 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0260 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0002t0002g0235 a0001c0002t0002g0249 a0001c0003t0003g0007 a0001c0003t0003g0209 a0001c0003t0003g0241 a0001c0003t0003g0243 a0001c0003t0003g0258 a0001c0003t0003g0259 a0001c0005t0001g0035 a0001c0005t0001g0261 a0001c0005t0008g0210 a0001c0010t0001g0077 a0001c0011t0002g0019 a0001c0016t0008g0078 a0001c0038t0003g0242 a0001c0053t0001g0266 a0001c0058t0005g0055 a0002c0004t0004g0005 a0002c0004t0004g0245 a0002c0004t0004g0248 a0002c0004t0004g0263 a0002c0004t0025g0250 a0002c0007t0004g0239 a0002c0007t0004g0253 a0002c0007t0004g0254 a0002c0007t0004g0256 a0002c0007t0004g0257 a0003c0018t0009g0075 a0003c0018t0009g0076 a0003c0018t0020g0272 a0003c0020t0007g0052 a0003c0026t0008g0271 a0009c0066t0004g0255	59	384	0.1537	20	c.250 others(35): Show c.250-854_250-835dupAATGAAGGAAGGAAGGAAGG	LPL	ENSG00000175445.17	transcript	ENST00000650287.1	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr8	TogoVar
LPO_chr17_58233584_58273518	58234110	A A	AAATAAAT others(13): Show AAATAAATAAATAAATAAATG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp1 NA19240.hp1 HG02818.hp1 NA19240.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0069 a0001c0012t0002g0070 a0001c0012t0002g0069 a0001c0012t0002g0070	2	328	0.0061	20	c.-46 others(31): Show c.-4632_-4631insAATAAATAAATAAATAAATG	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding		4473		chr17	TogoVar
LPO_chr17_58233584_58273518	58254152	T T	TATAGATA others(13): Show TATAGATAGATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	328	0.0031	20	c.110 others(37): Show c.1106-637_1106-618dupTAGATAGATAGATAGATAGA	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
LPO_chr17_58233584_58273518	58254152	T T	TATAGATA others(13): Show TATAGATATATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG03516.hp1 NA18940.hp2 NA18979.hp2 HG03516.hp1 NA18940.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0084 a0001c0001t0001g0098 a0001c0002t0001g0128 a0001c0001t0001g0084 a0001c0001t0001g0098 a0001c0002t0001g0128	3	328	0.0092	20	c.110 others(37): Show c.1106-652_1106-651insTATAGATAGATAGATAGATA	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
LPO_chr17_58233584_58273518	58254152	T T	TATAGATA others(13): Show TATAGATATATATATAGATAG	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG03486.hp1 HG01099.hp2 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0097 a0001c0002t0001g0116 a0001c0002t0001g0097 a0001c0002t0001g0116	2	328	0.0061	20	c.110 others(37): Show c.1106-652_1106-651insTATATATAGATAGATAGATA	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
LPP_chr3_188149157_188895671	188167501	C C	CACAAAAC others(13): Show CACAAAACAAAACAAAACAAA	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG02922.hp1 NA19043.hp1 HG01978.hp1 HG02922.hp1 NA19043.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0006 a0003c0009 a0004c0017 a0001c0006 a0003c0009 a0004c0017	a0001c0006t0034 a0003c0009t0062 a0004c0017t0044 a0001c0006t0034 a0003c0009t0062 a0004c0017t0044	a0001c0006t0034g0039 a0003c0009t0062g0017 a0004c0017t0044g0043 a0001c0006t0034g0039 a0003c0009t0062g0017 a0004c0017t0044g0043	3	76	0.0395	20	c.-19 others(41): Show c.-190+13270_-190+13289dupACAAAACAAAACAAAACAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188203511	A A	ATTTTTAA others(13): Show ATTTTTAAATATATATATATT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03195.hp1 HG02109.hp1 HG03195.hp1	a0002 a0007 a0002 a0007	a0002c0015 a0007c0012 a0002c0015 a0007c0012	a0002c0015t0037 a0007c0012t0014 a0002c0015t0037 a0007c0012t0014	a0002c0015t0037g0051 a0007c0012t0014g0045 a0002c0015t0037g0051 a0007c0012t0014g0045	2	76	0.0263	20	c.-18 others(41): Show c.-189-21891_-189-21890insTTAAATATATATATATTTTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188248468	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02602.hp2 HG02615.hp2 others(3): Show HG02486.hp2 HG02602.hp2 HG02615.hp2 HG02922.hp1 HG03098.hp2 HG03130.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(3): Show a0001c0001 a0001c0002 a0002c0003 a0002c0007 a0003c0009 a0003c0011	a0001c0001t0001 a0001c0002t0054 a0002c0003t0004 others(3): Show a0001c0001t0001 a0001c0002t0054 a0002c0003t0004 a0002c0007t0007 a0003c0009t0062 a0003c0011t0004	a0001c0001t0001g0035 a0001c0002t0054g0018 a0002c0003t0004g0044 others(3): Show a0001c0001t0001g0035 a0001c0002t0054g0018 a0002c0003t0004g0044 a0002c0007t0007g0049 a0003c0009t0062g0017 a0003c0011t0004g0071	6	76	0.0790	20	c.-67 others(39): Show c.-67+22952_-67+22971dupTATATATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188252170	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0069 a0001c0001t0026g0069	1	76	0.0132	20	c.-67 others(39): Show c.-67+26660_-67+26679dupATATATATATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188276669	G G	GTCTCTCT others(13): Show GTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0002 a0002c0007t0002	a0002c0007t0002g0073 a0002c0007t0002g0073	1	76	0.0132	20	c.-67 others(39): Show c.-67+51148_-67+51167dupCTCTCTCTCTCTCTCTCTCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188466804	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01358.hp1 HG03130.hp2 HG01081.hp1 HG01358.hp1 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0003 a0001c0002 a0001c0006 a0002c0003	a0001c0002t0050 a0001c0006t0032 a0002c0003t0004 a0001c0002t0050 a0001c0006t0032 a0002c0003t0004	a0001c0002t0050g0052 a0001c0006t0032g0005 a0002c0003t0004g0044 a0001c0002t0050g0052 a0001c0006t0032g0005 a0002c0003t0004g0044	3	76	0.0395	20	c.194 others(39): Show c.194-17787_194-17786insTATATATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188474389	A A	AATGCATT others(13): Show AATGCATTGACATGCATTGAC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00639.hp2 others(33): Show HG00438.hp1 HG00438.hp2 HG00639.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01167.hp2 HG01175.hp1 HG01256.hp1 HG01358.hp1 HG01358.hp2 HG01978.hp1 HG02109.hp1 HG02109.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02738.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG03098.hp1 HG03130.hp2 HG03195.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03704.hp1 HG03834.hp2 NA18522.hp1 NA19043.hp1 NA19043.hp2 NA20752.hp1 NA20752.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0002 a0001c0005 others(11): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0004 a0002c0007 a0002c0008 a0003c0009 a0003c0011 a0004c0017 a0005c0016 a0006c0013 a0007c0012	a0001c0001t0001 a0001c0001t0005 a0001c0001t0017 others(32): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0049 a0001c0002t0001 a0001c0002t0011 a0001c0002t0050 a0001c0005t0031 a0001c0005t0036 a0001c0005t0040 a0001c0005t0042 a0001c0006t0032 a0001c0006t0034 a0002c0003t0002 a0002c0003t0004 a0002c0003t0009 a0002c0003t0029 a0002c0003t0056 a0002c0003t0059 a0002c0004t0003 a0002c0004t0012 a0002c0004t0045 a0002c0004t0068 a0002c0007t0002 a0002c0007t0007 a0002c0007t0021 a0002c0008t0060 a0003c0009t0062 a0003c0011t0048 a0004c0017t0044 a0005c0016t0043 a0006c0013t0003 a0007c0012t0014	a0001c0001t0001g0035 a0001c0001t0001g0056 a0001c0001t0005g0024 others(33): Show a0001c0001t0001g0035 a0001c0001t0001g0056 a0001c0001t0005g0024 a0001c0001t0017g0064 a0001c0001t0018g0072 a0001c0001t0020g0067 a0001c0001t0049g0031 a0001c0002t0001g0076 a0001c0002t0011g0038 a0001c0002t0050g0052 a0001c0005t0031g0003 a0001c0005t0036g0075 a0001c0005t0040g0030 a0001c0005t0042g0037 a0001c0006t0032g0005 a0001c0006t0034g0039 a0002c0003t0002g0004 a0002c0003t0004g0044 a0002c0003t0009g0070 a0002c0003t0029g0059 a0002c0003t0056g0016 a0002c0003t0059g0011 a0002c0004t0003g0050 a0002c0004t0012g0040 a0002c0004t0045g0026 a0002c0004t0068g0020 a0002c0007t0002g0073 a0002c0007t0007g0049 a0002c0007t0021g0063 a0002c0008t0060g0015 a0003c0009t0062g0017 a0003c0011t0048g0074 a0004c0017t0044g0043 a0005c0016t0043g0058 a0006c0013t0003g0046 a0007c0012t0014g0045	36	76	0.4737	20	c.194 others(39): Show c.194-10189_194-10170dupCATTGACATGCATTGACATG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188485796	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01978.hp2 HG02074.hp1 others(1): Show HG01361.hp2 HG01978.hp2 HG02074.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0061 a0001c0002t0001 a0001c0002t0058 others(1): Show a0001c0001t0061 a0001c0002t0001 a0001c0002t0058 a0001c0005t0040	a0001c0001t0061g0023 a0001c0002t0001g0055 a0001c0002t0058g0013 others(1): Show a0001c0001t0061g0023 a0001c0002t0001g0055 a0001c0002t0058g0013 a0001c0005t0040g0030	4	76	0.0526	20	c.306 others(37): Show c.306+1110_306+1111insAAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188495064	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01074.hp2 HG02109.hp2 others(1): Show HG00639.hp2 HG01074.hp2 HG02109.hp2 HG03704.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0008	a0001c0001t0017 a0001c0002t0001 a0001c0006t0041 others(1): Show a0001c0001t0017 a0001c0002t0001 a0001c0006t0041 a0002c0008t0060	a0001c0001t0017g0064 a0001c0002t0001g0076 a0001c0006t0041g0002 others(1): Show a0001c0001t0017g0064 a0001c0002t0001g0076 a0001c0006t0041g0002 a0002c0008t0060g0015	4	76	0.0526	20	c.306 others(39): Show c.306+10379_306+10380insATATATATATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188563460	A A	ATATGTGT others(13): Show ATATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp1 HG01175.hp2 others(4): Show HG00438.hp2 HG00673.hp1 HG01175.hp2 HG02486.hp2 HG02886.hp1 HG03834.hp1 NA19043.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0002c0004 a0004c0017	a0001c0001t0055 a0001c0002t0001 a0001c0002t0054 others(4): Show a0001c0001t0055 a0001c0002t0001 a0001c0002t0054 a0001c0005t0036 a0001c0005t0063 a0002c0004t0033 a0004c0017t0044	a0001c0001t0055g0012 a0001c0002t0001g0029 a0001c0002t0054g0018 others(4): Show a0001c0001t0055g0012 a0001c0002t0001g0029 a0001c0002t0054g0018 a0001c0005t0036g0075 a0001c0005t0063g0022 a0002c0004t0033g0062 a0004c0017t0044g0043	7	76	0.0921	20	c.429 others(39): Show c.429+38674_429+38675insATGTGTGTGTGTGTGTGTGT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188563460	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02615.hp1 HG00639.hp1 HG02615.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0010 a0002c0003 a0004c0010	a0002c0003t0022 a0004c0010t0038 a0002c0003t0022 a0004c0010t0038	a0002c0003t0022g0054 a0004c0010t0038g0057 a0002c0003t0022g0054 a0004c0010t0038g0057	2	76	0.0263	20	c.429 others(39): Show c.429+38680_429+38699dupTGTGTGTGTGTGTGTGTGTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188592563	T T	TTTTTTTT others(13): Show TTTTTTTTTTTTTTTTTTTGG	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01978.hp2 NA20752.hp2 HG01175.hp2 HG01978.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0005 a0001c0001t0061 a0001c0005t0063 a0001c0001t0005 a0001c0001t0061 a0001c0005t0063	a0001c0001t0005g0024 a0001c0001t0061g0023 a0001c0005t0063g0022 a0001c0001t0005g0024 a0001c0001t0061g0023 a0001c0005t0063g0022	3	76	0.0395	20	c.430 others(39): Show c.430-16598_430-16597insTTTTTTTTTTTTTTTTTTGG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188624766	C C	CCTTCCTT others(13): Show CCTTCCTTTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02922.hp1 HG03239.hp1 others(3): Show HG02886.hp2 HG02922.hp1 HG03239.hp1 NA19030.hp2 NA19043.hp1 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003 a0003c0009 a0004c0017	a0001c0001t0005 a0001c0002t0047 a0001c0005t0042 others(3): Show a0001c0001t0005 a0001c0002t0047 a0001c0005t0042 a0002c0003t0056 a0003c0009t0062 a0004c0017t0044	a0001c0001t0005g0024 a0001c0002t0047g0033 a0001c0005t0042g0037 others(3): Show a0001c0001t0005g0024 a0001c0002t0047g0033 a0001c0005t0042g0037 a0002c0003t0056g0016 a0003c0009t0062g0017 a0004c0017t0044g0043	6	76	0.0790	20	c.111 others(41): Show c.1113+14922_1113+14923insCTTCCTTTTCCTTCCTTCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188624779	T T	TTTCCTTC others(13): Show TTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0034 a0001c0006t0034	a0001c0006t0034g0039 a0001c0006t0034g0039	1	76	0.0132	20	c.111 others(41): Show c.1113+14947_1113+14966dupCTTCCTTCCTTCCTTCCTTC	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188657258	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01175.hp2 HG02109.hp1 others(16): Show HG00438.hp2 HG01175.hp2 HG02109.hp1 HG02486.hp1 HG02615.hp2 HG02738.hp1 HG02886.hp1 HG02896.hp2 HG02970.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03453.hp1 HG03453.hp2 HG03834.hp2 NA19030.hp2 NA19043.hp1 NA20752.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0002 a0001c0005 others(8): Show a0001c0001 a0001c0002 a0001c0005 a0002c0003 a0002c0004 a0002c0007 a0003c0011 a0004c0017 a0005c0016 a0006c0013 a0007c0012	a0001c0001t0005 a0001c0001t0049 a0001c0002t0016 others(16): Show a0001c0001t0005 a0001c0001t0049 a0001c0002t0016 a0001c0002t0019 a0001c0002t0047 a0001c0005t0036 a0001c0005t0040 a0001c0005t0063 a0002c0003t0006 a0002c0003t0013 a0002c0003t0029 a0002c0004t0033 a0002c0004t0045 a0002c0007t0007 a0003c0011t0004 a0004c0017t0044 a0005c0016t0043 a0006c0013t0003 a0007c0012t0014	a0001c0001t0005g0024 a0001c0001t0049g0031 a0001c0002t0016g0028 others(16): Show a0001c0001t0005g0024 a0001c0001t0049g0031 a0001c0002t0016g0028 a0001c0002t0019g0041 a0001c0002t0047g0033 a0001c0005t0036g0075 a0001c0005t0040g0030 a0001c0005t0063g0022 a0002c0003t0006g0034 a0002c0003t0013g0027 a0002c0003t0029g0059 a0002c0004t0033g0062 a0002c0004t0045g0026 a0002c0007t0007g0049 a0003c0011t0004g0071 a0004c0017t0044g0043 a0005c0016t0043g0058 a0006c0013t0003g0046 a0007c0012t0014g0045	19	76	0.2500	20	c.111 others(41): Show c.1113+47418_1113+47437dupATATATATATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188657258	G G	GTGTATAT others(13): Show GTGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	76	0.0132	20	c.111 others(41): Show c.1113+47415_1113+47416insGTATATATATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188658122	A A	ATTAGTTT others(13): Show ATTAGTTTAGTTTAGTTTAGT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00673.hp2 HG01361.hp2 others(8): Show HG00639.hp2 HG00673.hp2 HG01361.hp2 HG02074.hp1 HG02602.hp2 HG02738.hp2 HG02896.hp1 HG03834.hp1 NA19030.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0007	a0001c0001t0001 a0001c0001t0057 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0057 a0001c0002t0001 a0001c0002t0058 a0001c0005t0030 a0001c0005t0031 a0001c0006t0066 a0002c0003t0023 a0002c0007t0021	a0001c0001t0001g0035 a0001c0001t0057g0006 a0001c0002t0001g0029 others(8): Show a0001c0001t0001g0035 a0001c0001t0057g0006 a0001c0002t0001g0029 a0001c0002t0001g0055 a0001c0002t0001g0076 a0001c0002t0058g0013 a0001c0005t0030g0047 a0001c0005t0031g0003 a0001c0006t0066g0021 a0002c0003t0023g0001 a0002c0007t0021g0063	11	76	0.1447	20	c.111 others(41): Show c.1113+48292_1113+48293insTTTAGTTTAGTTTAGTTTAG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188731516	T T	TTTTTGTT others(13): Show TTTTTGTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp2 HG02615.hp1 others(2): Show HG02109.hp1 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG03453.hp1	a0002 a0004 a0007 a0002 a0004 a0007	a0002c0003 a0002c0004 a0002c0008 others(2): Show a0002c0003 a0002c0004 a0002c0008 a0004c0010 a0007c0012	a0002c0003t0029 a0002c0004t0039 a0002c0008t0060 others(2): Show a0002c0003t0029 a0002c0004t0039 a0002c0008t0060 a0004c0010t0038 a0007c0012t0014	a0002c0003t0029g0059 a0002c0004t0039g0053 a0002c0008t0060g0015 others(2): Show a0002c0003t0029g0059 a0002c0004t0039g0053 a0002c0008t0060g0015 a0004c0010t0038g0057 a0007c0012t0014g0045	5	76	0.0658	20	c.124 others(41): Show c.1240+23129_1240+23148dupTTTTGTTTTGTTTTGTTTTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar

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