Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRP2_chr2_169122109_169367534	169326172	C C	CTCCCTCC others(13): Show CTCCCTCCCCCTCTCCCCTCT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03209.hp1 HG03471.hp2 HG01255.hp1 HG03209.hp1 HG03471.hp2	a0053 a0057 a0063 a0053 a0057 a0063	a0053c0134 a0057c0118 a0063c0161 a0053c0134 a0057c0118 a0063c0161	a0053c0134t0001 a0057c0118t0003 a0063c0161t0016 a0053c0134t0001 a0057c0118t0003 a0063c0161t0016	a0053c0134t0001g0137 a0057c0118t0003g0142 a0063c0161t0016g0242 a0053c0134t0001g0137 a0057c0118t0003g0142 a0063c0161t0016g0242	3	250	0.0120	20	c.80- others(35): Show c.80-5289_80-5288insAGAGGGGAGAGGGGGAGGGA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169326179	T T	TCCCTCTC others(13): Show TCCCTCTCCCCTCCCCCTCTC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0004 a0003c0016t0004	a0003c0016t0004g0126 a0003c0016t0004g0126	1	250	0.0040	20	c.80- others(35): Show c.80-5296_80-5295insGAGAGGGGGAGGGGAGAGGG	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169338359	G G	GGAAAGAA others(13): Show GGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG03491.hp1 NA18953.hp1 others(1): Show HG00544.hp1 HG03491.hp1 NA18953.hp1 NA19088.hp2	a0001 a0008 a0009 a0001 a0008 a0009	a0001c0018 a0008c0012 a0009c0052 others(1): Show a0001c0018 a0008c0012 a0009c0052 a0009c0107	a0001c0018t0007 a0008c0012t0011 a0009c0052t0001 others(1): Show a0001c0018t0007 a0008c0012t0011 a0009c0052t0001 a0009c0107t0003	a0001c0018t0007g0084 a0008c0012t0011g0237 a0009c0052t0001g0216 others(1): Show a0001c0018t0007g0084 a0008c0012t0011g0237 a0009c0052t0001g0216 a0009c0107t0003g0109	4	250	0.0160	20	c.80- others(37): Show c.80-17495_80-17476dupTTTCTTTCTTTCTTTCTTTC	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP5_chr11_68307591_68454275	68341059	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02622.hp2 HG02723.hp1 HG02615.hp1 HG02622.hp2 HG02723.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 a0001c0002 a0001c0004 a0001c0005	a0001c0002t0001 a0001c0004t0001 a0001c0005t0001 a0001c0002t0001 a0001c0004t0001 a0001c0005t0001	a0001c0002t0001g0161 a0001c0004t0001g0180 a0001c0005t0001g0209 a0001c0002t0001g0161 a0001c0004t0001g0180 a0001c0005t0001g0209	3	212	0.0142	20	c.92- others(35): Show c.92-6769_92-6768insTTTTTTTTTTTTTTTTTTTT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68397972	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0015 a0015	a0015c0039 a0015c0039	a0015c0039t0001 a0015c0039t0001	a0015c0039t0001g0190 a0015c0039t0001g0190	1	212	0.0047	20	c.158 others(39): Show c.1585-5493_1585-5474dupGTGTGTGTGTGTGTGTGTGT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409071	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0014 a0001c0005t0001g0014	1	212	0.0047	20	c.209 others(37): Show c.2092-842_2092-841insTATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAAATATA others(13): Show AAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03130.hp1 HG02630.hp1 HG03130.hp1	a0001 a0001	a0001c0007 a0001c0020 a0001c0007 a0001c0020	a0001c0007t0001 a0001c0020t0001 a0001c0007t0001 a0001c0020t0001	a0001c0007t0001g0007 a0001c0020t0001g0164 a0001c0007t0001g0007 a0001c0020t0001g0164	2	212	0.0094	20	c.209 others(37): Show c.2092-840_2092-839insAATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP6_chr12_12111025_12272044	12119990	A A	AATATATA others(13): Show AATATATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19067.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0069 a0001c0001t0069	a0001c0001t0069g0172 a0001c0001t0069g0172	1	262	0.0038	20	c.11 others(31): Show c.1116_*1135dupATATATATATATATATATAT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	23/23	1135		chr12	TogoVar
LRP6_chr12_12111025_12272044	12164919	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01070.hp2 NA20905.hp2 HG00735.hp1 HG01070.hp2 NA20905.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0021 a0002c0002t0108 a0002c0002t0016 a0002c0002t0021 a0002c0002t0108	a0002c0002t0016g0090 a0002c0002t0021g0092 a0002c0002t0108g0086 a0002c0002t0016g0090 a0002c0002t0021g0092 a0002c0002t0108g0086	3	262	0.0115	20	c.176 others(37): Show c.1762+140_1762+159dupTTTTTTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	8/22			chr12	TogoVar
LRP6_chr12_12111025_12272044	12179405	G G	GATATAGA others(13): Show GATATAGATATAGATATAGAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0004 a0003c0006t0004	a0003c0006t0004g0238 a0003c0006t0004g0238	1	262	0.0038	20	c.154 others(37): Show c.1545+404_1545+405insATCTATATCTATATCTATAT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	7/22			chr12	TogoVar
LRP8_chr1_53237364_53333070	53237673	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp1 HG02818.hp2 NA18942.hp2 others(6): Show HG02083.hp1 HG02818.hp2 NA18942.hp2 NA18980.hp1 NA18993.hp2 NA19010.hp1 NA19011.hp1 NA19085.hp1 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0002c0009 a0001c0006 a0002c0009	a0001c0006t0013 a0001c0006t0018 a0001c0006t0026 others(2): Show a0001c0006t0013 a0001c0006t0018 a0001c0006t0026 a0001c0006t0055 a0002c0009t0026	a0001c0006t0013g0205 a0001c0006t0013g0206 a0001c0006t0013g0207 others(6): Show a0001c0006t0013g0205 a0001c0006t0013g0206 a0001c0006t0013g0207 a0001c0006t0013g0208 a0001c0006t0018g0149 a0001c0006t0018g0266 a0001c0006t0026g0153 a0001c0006t0055g0211 a0002c0009t0026g0112	9	296	0.0304	20	c.93 others(31): Show c.9325_*9344dupTTTTTTTTTTTTTTTTTTTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		4690		chr1	TogoVar
LRP8_chr1_53237364_53333070	53242858	T T	TATATATA others(13): Show TATATATATATATATACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0057 a0002c0003t0057	a0002c0003t0057g0082 a0002c0003t0057g0082	1	296	0.0034	20	c.41 others(31): Show c.4159_*4160insGTGTGTATATATATATATAT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	19/19	4159		chr1	TogoVar
LRP8_chr1_53237364_53333070	53283498	T T	TACTTACT others(13): Show TACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02896.hp2 HG02897.hp2 others(4): Show HG02109.hp1 HG02896.hp2 HG02897.hp2 HG03098.hp2 HG03516.hp1 NA20129.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0005 a0001c0001t0021 a0001c0001t0065 others(1): Show a0001c0001t0005 a0001c0001t0021 a0001c0001t0065 a0003c0005t0002	a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0144 others(4): Show a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0144 a0001c0001t0005g0253 a0001c0001t0021g0137 a0001c0001t0065g0283 a0003c0005t0002g0085	7	296	0.0237	20	c.368 others(37): Show c.368-2784_368-2783insGGCCCGGGTATGTAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283550	T T	TACTTACT others(13): Show TACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02258.hp1 HG02280.hp1 others(13): Show HG01943.hp2 HG02258.hp1 HG02280.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG03139.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 others(2): Show a0001c0001 a0001c0004 a0001c0006 a0001c0023 a0001c0026	a0001c0001t0001 a0001c0001t0053 a0001c0004t0037 others(6): Show a0001c0001t0001 a0001c0001t0053 a0001c0004t0037 a0001c0004t0044 a0001c0004t0047 a0001c0006t0036 a0001c0006t0055 a0001c0023t0035 a0001c0026t0024	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0136 others(11): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0136 a0001c0001t0001g0145 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0053g0139 a0001c0004t0037g0025 a0001c0004t0044g0257 a0001c0004t0047g0252 a0001c0006t0036g0012 a0001c0006t0055g0211 a0001c0023t0035g0024 a0001c0026t0024g0255	16	296	0.0541	20	c.368 others(37): Show c.368-2836_368-2835insGGCCCGGGTATGTAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283557	T T	TACATACC others(13): Show TACATACCCGGGCCACTTACA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(67): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00738.hp2 HG01099.hp1 HG01123.hp2 HG01255.hp2 HG01358.hp1 HG02040.hp2 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02165.hp1 HG02523.hp1 HG02683.hp1 HG03704.hp1 HG03831.hp1 HG03927.hp2 HG04199.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18945.hp2 NA18948.hp1 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18960.hp2 NA18969.hp1 NA18969.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp2 NA18993.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19004.hp1 NA19011.hp2 NA19056.hp1 NA19056.hp2 NA19065.hp2 NA19066.hp2 NA19070.hp2 NA19076.hp1 NA19080.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0009	a0001c0001 a0001c0004 a0002c0002 others(6): Show a0001c0001 a0001c0004 a0002c0002 a0002c0003 a0002c0017 a0003c0005 a0004c0007 a0006c0010 a0009c0016	a0001c0001t0001 a0001c0001t0010 a0001c0004t0002 others(18): Show a0001c0001t0001 a0001c0001t0010 a0001c0004t0002 a0001c0004t0006 a0001c0004t0009 a0001c0004t0027 a0001c0004t0029 a0001c0004t0030 a0002c0002t0010 a0002c0003t0002 a0002c0003t0006 a0002c0003t0057 a0002c0003t0063 a0002c0017t0002 a0003c0005t0002 a0003c0005t0009 a0003c0005t0028 a0004c0007t0002 a0004c0007t0009 a0006c0010t0020 a0009c0016t0029	a0001c0001t0001g0174 a0001c0001t0001g0182 a0001c0001t0001g0183 others(67): Show a0001c0001t0001g0174 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0218 a0001c0001t0001g0243 a0001c0001t0010g0146 a0001c0001t0010g0213 a0001c0004t0002g0157 a0001c0004t0002g0169 a0001c0004t0002g0176 a0001c0004t0002g0195 a0001c0004t0002g0197 a0001c0004t0002g0202 a0001c0004t0002g0217 a0001c0004t0002g0225 a0001c0004t0002g0264 a0001c0004t0006g0156 a0001c0004t0006g0188 a0001c0004t0006g0194 a0001c0004t0006g0201 a0001c0004t0009g0209 a0001c0004t0027g0190 a0001c0004t0027g0265 a0001c0004t0029g0150 a0001c0004t0030g0193 a0001c0004t0030g0199 a0002c0002t0010g0043 a0002c0002t0010g0049 a0002c0003t0002g0037 a0002c0003t0002g0040 a0002c0003t0002g0041 a0002c0003t0002g0050 a0002c0003t0002g0051 a0002c0003t0002g0060 a0002c0003t0002g0062 a0002c0003t0002g0063 a0002c0003t0002g0071 a0002c0003t0002g0075 a0002c0003t0002g0088 a0002c0003t0002g0092 a0002c0003t0002g0131 a0002c0003t0002g0132 a0002c0003t0002g0133 a0002c0003t0006g0070 a0002c0003t0006g0091 a0002c0003t0006g0118 a0002c0003t0057g0082 a0002c0003t0063g0083 a0002c0017t0002g0123 a0003c0005t0002g0029 a0003c0005t0002g0046 a0003c0005t0002g0074 a0003c0005t0002g0081 a0003c0005t0002g0084 a0003c0005t0002g0095 a0003c0005t0002g0096 a0003c0005t0002g0113 a0003c0005t0002g0126 a0003c0005t0009g0073 a0003c0005t0028g0076 a0003c0005t0028g0078 a0004c0007t0002g0147 a0004c0007t0009g0233 a0006c0010t0020g0010 a0006c0010t0020g0011 a0009c0016t0029g0056	70	296	0.2365	20	c.368 others(37): Show c.368-2843_368-2842insTGTAAGTGGCCCGGGTATGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283626	T T	TACTTACT others(13): Show TACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03834.hp1 HG03669.hp2 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0025 a0001c0001t0001 a0001c0001t0025	a0001c0001t0001g0224 a0001c0001t0025g0140 a0001c0001t0001g0224 a0001c0001t0025g0140	2	296	0.0068	20	c.368 others(37): Show c.368-2912_368-2911insGGCCCGGGTATGTAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53283702	T T	TACTTACT others(13): Show TACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01433.hp2 HG01516.hp1 others(8): Show HG01261.hp2 HG01433.hp2 HG01516.hp1 HG01516.hp2 HG02602.hp1 HG02630.hp1 HG02738.hp2 HG03669.hp1 HG03927.hp1 NA18946.hp2 NA18948.hp2	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0008 a0013	a0001c0001 a0001c0026 a0002c0002 others(3): Show a0001c0001 a0001c0026 a0002c0002 a0005c0013 a0008c0015 a0013c0028	a0001c0001t0001 a0001c0026t0024 a0002c0002t0001 others(3): Show a0001c0001t0001 a0001c0026t0024 a0002c0002t0001 a0005c0013t0001 a0008c0015t0006 a0013c0028t0001	a0001c0001t0001g0220 a0001c0001t0001g0230 a0001c0001t0001g0232 others(8): Show a0001c0001t0001g0220 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0026t0024g0255 a0002c0002t0001g0034 a0002c0002t0001g0130 a0005c0013t0001g0274 a0008c0015t0006g0129 a0013c0028t0001g0212	11	296	0.0372	20	c.368 others(37): Show c.368-2988_368-2987insGGCCCGGGTATGTAGTAAGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53330501	A A	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp1 HG02451.hp2 NA19030.hp2 others(1): Show HG02280.hp1 HG02451.hp2 NA19030.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0004 a0001c0008t0001 a0001c0001t0001 a0001c0001t0004 a0001c0008t0001	a0001c0001t0001g0247 a0001c0001t0004g0007 a0001c0008t0001g0248 a0001c0001t0001g0247 a0001c0001t0004g0007 a0001c0008t0001g0248	4	296	0.0135	20	c.-25 others(31): Show c.-2590_-2589insCCTTCCTTCCTTCCTTCCTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		2432		chr1	TogoVar
LRP8_chr1_53237364_53333070	53330505	A A	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0047 a0001c0004t0047	a0001c0004t0047g0252 a0001c0004t0047g0252	1	296	0.0034	20	c.-25 others(31): Show c.-2594_-2593insCCTTCCTTCCTTCCTTCCTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		2436		chr1	TogoVar
LRP8_chr1_53237364_53333070	53330505	A A	AAAGGAAG others(13): Show AAAGGAAGGAAGGTAGGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp1 NA20129.hp1 HG02630.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0026 a0001c0001 a0001c0026	a0001c0001t0005 a0001c0026t0024 a0001c0001t0005 a0001c0026t0024	a0001c0001t0005g0253 a0001c0026t0024g0255 a0001c0001t0005g0253 a0001c0026t0024g0255	2	296	0.0068	20	c.-25 others(31): Show c.-2594_-2593insCCTTCCTACCTTCCTTCCTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		2436		chr1	TogoVar
LRPPRC_chr2_43881224_44000989	43884376	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG01257.hp1 others(34): Show HG00099.hp2 HG00438.hp1 HG01257.hp1 HG01361.hp1 HG01515.hp1 HG01928.hp2 HG01934.hp2 HG02074.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02148.hp2 HG02300.hp1 HG02523.hp1 HG03195.hp1 HG03540.hp1 HG03704.hp1 HG03942.hp1 NA18955.hp2 NA18965.hp2 NA18974.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18993.hp1 NA18993.hp2 NA18998.hp1 NA19005.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp1 NA19058.hp2 NA19066.hp2 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA20905.hp2	a0001 a0002 a0007 others(1): Show a0001 a0002 a0007 a0015	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0009 a0002c0006 a0002c0007 a0007c0012 a0015c0020	a0001c0001t0001 a0001c0001t0006 a0001c0001t0032 others(9): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0032 a0001c0002t0001 a0001c0002t0003 a0001c0002t0026 a0001c0003t0007 a0001c0009t0056 a0002c0006t0065 a0002c0007t0010 a0007c0012t0001 a0015c0020t0066	a0001c0001t0001g0308 a0001c0001t0006g0171 a0001c0001t0032g0284 others(34): Show a0001c0001t0001g0308 a0001c0001t0006g0171 a0001c0001t0032g0284 a0001c0002t0001g0101 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0135 a0001c0002t0001g0199 a0001c0002t0001g0205 a0001c0002t0001g0208 a0001c0002t0001g0213 a0001c0002t0001g0214 a0001c0002t0001g0215 a0001c0002t0001g0216 a0001c0002t0001g0219 a0001c0002t0001g0220 a0001c0002t0001g0226 a0001c0002t0001g0262 a0001c0002t0001g0270 a0001c0002t0001g0300 a0001c0002t0001g0301 a0001c0002t0001g0310 a0001c0002t0001g0330 a0001c0002t0003g0202 a0001c0002t0003g0235 a0001c0002t0003g0281 a0001c0002t0003g0312 a0001c0002t0026g0258 a0001c0003t0007g0051 a0001c0009t0056g0168 a0002c0006t0065g0165 a0002c0007t0010g0012 a0007c0012t0001g0343 a0007c0012t0001g0344 a0015c0020t0066g0158	37	358	0.1034	20	c.42 others(31): Show c.4223_*4224insATTTATTTATTTATTTATTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding		1847		chr2	TogoVar
LRPPRC_chr2_43881224_44000989	43887143	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01928.hp1 HG02698.hp1 NA18962.hp1 others(13): Show HG01928.hp1 HG02698.hp1 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18970.hp1 NA18988.hp1 NA19011.hp1 NA19012.hp1 NA19054.hp1 NA19070.hp1 NA19077.hp2 NA19079.hp2 NA19084.hp2 NA19086.hp1	a0001 a0015 a0001 a0015	a0001c0001 a0001c0002 a0015c0020 a0001c0001 a0001c0002 a0015c0020	a0001c0001t0006 a0001c0001t0036 a0001c0002t0006 others(1): Show a0001c0001t0006 a0001c0001t0036 a0001c0002t0006 a0015c0020t0066	a0001c0001t0006g0061 a0001c0001t0006g0144 a0001c0001t0006g0148 others(13): Show a0001c0001t0006g0061 a0001c0001t0006g0144 a0001c0001t0006g0148 a0001c0001t0006g0155 a0001c0001t0006g0171 a0001c0001t0006g0172 a0001c0001t0006g0180 a0001c0001t0006g0181 a0001c0001t0006g0186 a0001c0001t0006g0189 a0001c0001t0006g0277 a0001c0001t0006g0278 a0001c0001t0006g0314 a0001c0001t0036g0286 a0001c0002t0006g0218 a0015c0020t0066g0158	16	358	0.0447	20	c.14 others(31): Show c.1437_*1456dupTTTTTTTTTTTTTTTTTTTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	38/38	1456		chr2	TogoVar
LRPPRC_chr2_43881224_44000989	43956478	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02015.hp2 HG02129.hp2 others(16): Show HG00438.hp2 HG02015.hp2 HG02129.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp2 HG03927.hp2 NA18951.hp2 NA18954.hp2 NA18959.hp1 NA18973.hp2 NA18975.hp1 NA18988.hp1 NA18994.hp1 NA18997.hp1 NA19007.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0024 a0001c0001 a0009c0024	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(15): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0036 a0001c0001t0038 a0001c0001t0040 a0001c0001t0041 a0001c0001t0048 a0001c0001t0051 a0001c0001t0054 a0001c0001t0058 a0001c0001t0063 a0009c0024t0002	a0001c0001t0001g0122 a0001c0001t0004g0150 a0001c0001t0006g0189 others(16): Show a0001c0001t0001g0122 a0001c0001t0004g0150 a0001c0001t0006g0189 a0001c0001t0009g0110 a0001c0001t0009g0146 a0001c0001t0011g0182 a0001c0001t0015g0143 a0001c0001t0016g0289 a0001c0001t0018g0196 a0001c0001t0036g0286 a0001c0001t0038g0134 a0001c0001t0040g0157 a0001c0001t0041g0167 a0001c0001t0048g0192 a0001c0001t0051g0159 a0001c0001t0054g0164 a0001c0001t0058g0062 a0001c0001t0063g0133 a0009c0024t0002g0163	19	358	0.0531	20	c.164 others(37): Show c.1649+887_1649+906dupACACACACACACACACACAC	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	14/37			chr2	TogoVar
LRR1_chr14_49593940_49619672	49618133	G G	GAGTACCT others(13): Show GAGTACCTCCCAGAGTGTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG02572.hp2 HG02630.hp1 others(6): Show HG01891.hp2 HG02572.hp2 HG02630.hp1 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG03209.hp1 HG03225.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0008 a0003c0003t0001g0020 a0003c0003t0001g0117 others(3): Show a0003c0003t0001g0008 a0003c0003t0001g0020 a0003c0003t0001g0117 a0003c0003t0001g0118 a0003c0003t0001g0119 a0003c0003t0001g0120	9	312	0.0289	20	c.36 others(31): Show c.3637_*3638insAGTACCTCCCAGAGTGTTCT	LRR1	ENSG00000165501.17	transcript	ENST00000298288.11	protein_coding		3462		chr14	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(13): Show ATATATATATATATATGTATG	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01192.hp1 HG01516.hp1 others(9): Show HG00323.hp1 HG01192.hp1 HG01516.hp1 HG02602.hp1 HG02818.hp1 HG03831.hp2 HG04184.hp1 NA18943.hp1 NA18947.hp1 NA18969.hp2 NA19000.hp1 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0014 a0002c0002t0001 a0001c0001t0001 a0001c0001t0014 a0002c0002t0001	a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0108 others(7): Show a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0108 a0001c0001t0001g0163 a0001c0001t0001g0194 a0001c0001t0001g0215 a0001c0001t0001g0279 a0001c0001t0014g0266 a0002c0002t0001g0131 a0002c0002t0001g0193	12	420	0.0286	20	c.-77 others(37): Show c.-77-9275_-77-9274insCATACATATATATATATATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC20_chr10_70293975_70387625	70304470	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01255.hp2 HG02109.hp1 others(2): Show HG01069.hp2 HG01255.hp2 HG02109.hp1 HG02273.hp2 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 others(2): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0015	a0001c0001t0002g0119 a0001c0001t0007g0114 a0001c0001t0008g0204 others(2): Show a0001c0001t0002g0119 a0001c0001t0007g0114 a0001c0001t0008g0204 a0001c0001t0009g0163 a0001c0001t0015g0219	5	378	0.0132	20	c.401 others(37): Show c.401-2982_401-2963dupTATATATATATATATATATA	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	4/4			chr10	TogoVar
LRRC20_chr10_70293975_70387625	70304470	T T	TTTTATAT others(13): Show TTTTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp1 HG03490.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	2	378	0.0053	20	c.401 others(37): Show c.401-2963_401-2962insTATATATATATATATATAAA	LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	4/4			chr10	TogoVar
LRRC23_chr12_6899822_6919229	6901494	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01175.hp1 HG01175.hp2 others(16): Show HG00280.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01346.hp1 HG02056.hp1 HG02257.hp1 HG02257.hp2 HG02572.hp2 HG03139.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp1 NA19003.hp2 NA19030.hp2 NA19074.hp2 NA19081.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0006 a0002c0002t0002 a0001c0001t0006 a0002c0002t0002	a0001c0001t0006g0167 a0001c0001t0006g0218 a0002c0002t0002g0015 others(15): Show a0001c0001t0006g0167 a0001c0001t0006g0218 a0002c0002t0002g0015 a0002c0002t0002g0037 a0002c0002t0002g0040 a0002c0002t0002g0132 a0002c0002t0002g0135 a0002c0002t0002g0136 a0002c0002t0002g0138 a0002c0002t0002g0142 a0002c0002t0002g0149 a0002c0002t0002g0154 a0002c0002t0002g0165 a0002c0002t0002g0168 a0002c0002t0002g0209 a0002c0002t0002g0213 a0002c0002t0002g0217 a0002c0002t0002g0225	19	316	0.0601	20	c.-36 others(31): Show c.-3631_-3630insAAAAAAAAAAAAAAAAAAAA	LRRC23	ENSG00000010626.15	transcript	ENST00000443597.7	protein_coding		3327		chr12	TogoVar
LRRC23_chr12_6899822_6919229	6913551	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0047 a0002c0002t0002g0047	1	316	0.0032	20	c.25 others(35): Show c.25-337_*25-336insTTTTTTTTTTTTTTTTTTTT	LRRC23	ENSG00000010626.15	transcript	ENST00000443597.7	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRC25_chr19_18386137_18402622	18387813	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02572.hp2 HG02630.hp1 others(2): Show HG02257.hp2 HG02572.hp2 HG02630.hp1 HG02809.hp2 HG03579.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0004 a0003c0003t0004 a0001c0001t0004 a0003c0003t0004	a0001c0001t0004g0012 a0001c0001t0004g0014 a0003c0003t0004g0037 a0001c0001t0004g0012 a0001c0001t0004g0014 a0003c0003t0004g0037	5	434	0.0115	20	c.41 others(31): Show c.4154_*4173dupAAAAAAAAAAAAAAAAAAAA	LRRC25	ENSG00000175489.10	transcript	ENST00000339007.4	protein_coding		3323		chr19	TogoVar
LRRC27_chr10_132327193_132386508	132364373	C C	CCACACTT others(13): Show CCACACTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0218 a0001c0001t0041g0218	1	290	0.0035	20	c.129 others(39): Show c.1290-1048_1290-1047insACTTACATCTACCTCCACAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364375	A A	ACGCTTAC others(13): Show ACGCTTACATCTACCTCCACG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0004 a0004	a0004c0017 a0004c0017	a0004c0017t0049 a0004c0017t0049	a0004c0017t0049g0277 a0004c0017t0049g0277	1	290	0.0035	20	c.129 others(39): Show c.1290-1048_1290-1047insGCTTACATCTACCTCCACGC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364461	C C	CCACCCTT others(13): Show CCACCCTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0241 a0001c0002t0003g0241	1	290	0.0035	20	c.129 others(37): Show c.1290-958_1290-957insTTACATCTACCTCCACACCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364461	C C	CTACGCTT others(13): Show CTACGCTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0022 a0002c0004t0022	a0002c0004t0022g0012 a0002c0004t0022g0012	1	290	0.0035	20	c.129 others(37): Show c.1290-963_1290-962insTACGCTTACATCTACCTCCA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364477	C C	CCACACTT others(13): Show CCACACTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0214 a0001c0002t0019g0214	1	290	0.0035	20	c.129 others(37): Show c.1290-944_1290-943insACTTACATCTACCTCCACAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364477	C C	CCACCCTT others(13): Show CCACCCTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01261.hp2 HG02723.hp1 others(1): Show HG00280.hp2 HG01261.hp2 HG02723.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 a0001c0002t0004	a0001c0001t0001g0172 a0001c0001t0002g0004 a0001c0001t0014g0125 others(1): Show a0001c0001t0001g0172 a0001c0001t0002g0004 a0001c0001t0014g0125 a0001c0002t0004g0255	4	290	0.0138	20	c.129 others(37): Show c.1290-942_1290-941insTTACATCTACCTCCACACCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364477	C C	CCACGCTT others(13): Show CCACGCTTACATCTACCTCCA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02300.hp1 HG02965.hp2 HG00323.hp2 HG02300.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0047 a0001c0003t0007 a0001c0001t0047 a0001c0003t0007	a0001c0001t0047g0286 a0001c0003t0007g0093 a0001c0003t0007g0094 a0001c0001t0047g0286 a0001c0003t0007g0093 a0001c0003t0007g0094	3	290	0.0103	20	c.129 others(37): Show c.1290-944_1290-943insGCTTACATCTACCTCCACAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364479	A A	ACCCTTAC others(13): Show ACCCTTACATCTACCTCCACG	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03225.hp1 HG02809.hp2 HG03225.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0008 a0001c0005t0015 a0001c0005t0008 a0001c0005t0015	a0001c0005t0008g0225 a0001c0005t0015g0223 a0001c0005t0008g0225 a0001c0005t0015g0223	2	290	0.0069	20	c.129 others(37): Show c.1290-942_1290-941insTTACATCTACCTCCACGCCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364479	A A	ACGCTTAC others(13): Show ACGCTTACATCTACCTCCACG	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0283 a0001c0009t0002g0283	1	290	0.0035	20	c.129 others(37): Show c.1290-944_1290-943insGCTTACATCTACCTCCACGC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC28_chr15_99246481_99395729	99282177	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 NA18980.hp2 NA19002.hp1 others(3): Show HG00099.hp2 NA18980.hp2 NA19002.hp1 NA19006.hp1 NA19064.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0049 a0001c0001t0053 others(1): Show a0001c0001t0007 a0001c0001t0049 a0001c0001t0053 a0001c0001t0059	a0001c0001t0007g0054 a0001c0001t0007g0056 a0001c0001t0007g0057 others(3): Show a0001c0001t0007g0054 a0001c0001t0007g0056 a0001c0001t0007g0057 a0001c0001t0049g0055 a0001c0001t0053g0044 a0001c0001t0059g0062	6	332	0.0181	20	c.210 others(37): Show c.210-5066_210-5065insTTTTTTTTTTTTTTTTTTTT	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC31_chr3_169834172_169874935	169835364	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0146 a0001c0008t0001g0146	1	322	0.0031	20	c.45 others(31): Show c.4598_*4617dupCACACACACACACACACACA	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding		3807		chr3	TogoVar
LRRC31_chr3_169834172_169874935	169835364	C C	CTTTGTGT others(13): Show CTTTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG02922.hp2 HG00639.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0270 a0001c0001t0001g0118 a0001c0001t0001g0270	2	322	0.0062	20	c.46 others(31): Show c.4617_*4618insCACACACACACACACACAAA	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding		3807		chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857318	C C	CTATATAT others(13): Show CTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	322	0.0031	20	c.488 others(35): Show c.488-466_488-447dupTATATATATATATATATATA	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857345	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01361.hp2 HG01978.hp1 others(6): Show HG01192.hp2 HG01361.hp2 HG01978.hp1 HG02735.hp1 HG02738.hp2 HG03927.hp2 NA18944.hp1 NA18949.hp2 NA18997.hp2	a0002 a0006 a0002 a0006	a0002c0003 a0002c0009 a0006c0010 a0002c0003 a0002c0009 a0006c0010	a0002c0003t0001 a0002c0009t0001 a0006c0010t0003 a0002c0003t0001 a0002c0009t0001 a0006c0010t0003	a0002c0003t0001g0140 a0002c0003t0001g0195 a0002c0003t0001g0258 others(6): Show a0002c0003t0001g0140 a0002c0003t0001g0195 a0002c0003t0001g0258 a0002c0003t0001g0259 a0002c0003t0001g0261 a0002c0003t0001g0265 a0002c0009t0001g0283 a0006c0010t0003g0026 a0006c0010t0003g0028	9	322	0.0280	20	c.488 others(35): Show c.488-474_488-473insGTGTATATATATATATATAT	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857415	C C	CATATATA others(13): Show CATATATACATATATATATAT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00738.hp2 HG01106.hp1 others(20): Show HG00544.hp1 HG00738.hp2 HG01106.hp1 HG01256.hp2 HG01258.hp2 HG01358.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp1 HG01975.hp2 HG01978.hp1 HG02071.hp2 HG02145.hp1 HG02735.hp1 HG02738.hp2 HG03710.hp2 HG03927.hp2 NA18944.hp1 NA18949.hp2 NA18997.hp2 NA19060.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0008 a0002c0003 a0002c0009 others(2): Show a0001c0008 a0002c0003 a0002c0009 a0002c0014 a0006c0010	a0001c0008t0001 a0002c0003t0001 a0002c0009t0001 others(2): Show a0001c0008t0001 a0002c0003t0001 a0002c0009t0001 a0002c0014t0001 a0006c0010t0003	a0001c0008t0001g0273 a0002c0003t0001g0090 a0002c0003t0001g0091 others(20): Show a0001c0008t0001g0273 a0002c0003t0001g0090 a0002c0003t0001g0091 a0002c0003t0001g0140 a0002c0003t0001g0175 a0002c0003t0001g0195 a0002c0003t0001g0197 a0002c0003t0001g0198 a0002c0003t0001g0251 a0002c0003t0001g0253 a0002c0003t0001g0256 a0002c0003t0001g0258 a0002c0003t0001g0260 a0002c0003t0001g0261 a0002c0003t0001g0262 a0002c0003t0001g0264 a0002c0003t0001g0265 a0002c0003t0001g0266 a0002c0009t0001g0277 a0002c0009t0001g0283 a0002c0014t0001g0263 a0006c0010t0003g0026 a0006c0010t0003g0028	23	322	0.0714	20	c.488 others(35): Show c.488-544_488-543insATATATATATATGTATATAT	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857415	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	322	0.0031	20	c.488 others(35): Show c.488-544_488-543insATATATATATATATATATAT	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC34_chr3_169788003_169817904	169814479	G G	GTGTTTGT others(13): Show GTGTTTGTTTGTTTGTTTGTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0096 a0003c0003t0002g0096	1	322	0.0031	20	c.-19 others(31): Show c.-1951_-1932dupAACAAACAAACAAACAAACA	LRRC34	ENSG00000171757.17	transcript	ENST00000446859.7	protein_coding		1576		chr3	TogoVar
LRRC36_chr16_67321815_67390204	67331069	A A	AAGAGAGA others(13): Show AAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0044 a0002c0002t0002g0044	1	194	0.0052	20	c.70+ others(35): Show c.70+4163_70+4182dupGAGAGAGAGAGAGAGAGAGA	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC37A2_chr17_46507468_46560646	46528737	A A	AAAAAAAA others(13): Show AAAAAAAAAAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0003	a0004c0004t0003g0102 a0004c0004t0003g0102	1	109	0.0092	20	c.290 others(39): Show c.2906+4857_2906+4858insAAAAAAAGAAAGAAAGAAAA	LRRC37A2	ENSG00000238083.10	transcript	ENST00000576629.6	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
LRRC37B_chr17_32002383_32058487	32054647	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18954.hp2 NA18955.hp2 NA19090.hp1 NA18954.hp2 NA18955.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0156 a0001c0001t0001g0171 a0001c0001t0001g0173	3	242	0.0124	20	c.13 others(31): Show c.1319_*1320insTGTGTGTGTGTGTGTGTGTG	LRRC37B	ENSG00000185158.13	transcript	ENST00000543378.7	protein_coding		1161		chr17	TogoVar

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