Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MRPS9_chr2_105033069_105104960	105084247	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02080.hp1 NA18979.hp2 NA18986.hp1 others(4): Show HG02080.hp1 NA18979.hp2 NA18986.hp1 NA18995.hp1 NA19006.hp1 NA19010.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0172 a0001c0001t0001g0181 others(3): Show a0001c0001t0001g0027 a0001c0001t0001g0172 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0001g0201	7	394	0.0178	20	c.489 others(37): Show c.489+4188_489+4207dupATATATATATATATATATAT	MRPS9	ENSG00000135972.9	transcript	ENST00000258455.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
MRPS9_chr2_105033069_105104960	105087800	T T	TTTCCTTC others(13): Show TTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(41): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00597.hp2 HG00621.hp1 HG00642.hp2 HG00741.hp1 HG01074.hp2 HG01106.hp2 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp2 HG01258.hp2 HG01358.hp2 HG01515.hp1 HG01517.hp1 HG01952.hp2 HG02074.hp2 HG02080.hp2 HG02155.hp2 HG02257.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02738.hp2 HG03471.hp2 HG03491.hp2 HG03654.hp2 HG03669.hp2 HG03831.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 NA18954.hp2 NA18970.hp1 NA18973.hp1 NA19030.hp2 NA19043.hp2 NA19067.hp1 NA19074.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0030 a0001c0001t0001g0031 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0170 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0249 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0277 a0001c0001t0001g0302 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0331 a0001c0001t0001g0334	44	394	0.1117	20	c.490 others(37): Show c.490-1169_490-1150dupCCTTCCTTCCTTCCTTCCTT	MRPS9	ENSG00000135972.9	transcript	ENST00000258455.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
MRTFA_chr22_40405289_40641719	40455803	A A	AGTATGTA others(13): Show AGTATGTATGTATGTATGTAT	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18970.hp2 NA19003.hp1 others(1): Show NA18964.hp2 NA18970.hp2 NA19003.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0052 a0001c0001t0002g0057 others(1): Show a0001c0001t0002g0039 a0001c0001t0002g0052 a0001c0001t0002g0057 a0001c0001t0002g0063	4	256	0.0156	20	c.307 others(37): Show c.307+7398_307+7417dupATACATACATACATACATAC	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	4/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40457436	G G	GAGAAAGA others(13): Show GAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03139.hp1 NA19068.hp2 HG03139.hp1 NA19068.hp2	a0001 a0001	a0001c0003 a0001c0008 a0001c0003 a0001c0008	a0001c0003t0001 a0001c0008t0001 a0001c0003t0001 a0001c0008t0001	a0001c0003t0001g0189 a0001c0008t0001g0094 a0001c0003t0001g0189 a0001c0008t0001g0094	2	256	0.0078	20	c.307 others(37): Show c.307+5765_307+5784dupTTCTTTCTTTCTTTCTTTCT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	4/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40459822	C C	CACACACA others(13): Show CACACACATATATACATATAT	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	256	0.0039	20	c.307 others(37): Show c.307+3398_307+3399insATATATGTATATATGTGTGT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	4/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40459830	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02109.hp1 HG03098.hp2 HG01515.hp1 HG02109.hp1 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0020 a0001c0002 a0001c0004 a0001c0020	a0001c0002t0001 a0001c0004t0010 a0001c0020t0001 a0001c0002t0001 a0001c0004t0010 a0001c0020t0001	a0001c0002t0001g0107 a0001c0004t0010g0256 a0001c0020t0001g0253 a0001c0002t0001g0107 a0001c0004t0010g0256 a0001c0020t0001g0253	3	256	0.0117	20	c.307 others(37): Show c.307+3371_307+3390dupATATATATATATATATATAT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	4/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40470231	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0119 a0001c0004t0001g0119	1	256	0.0039	20	c.242 others(37): Show c.242-6965_242-6946dupTATATATATATATATATATA	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40470262	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0238 a0001c0001t0002g0238	1	256	0.0039	20	c.242 others(37): Show c.242-6977_242-6976insGTATATATATATATATATAT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40617184	A A	AGGAGGGA others(13): Show AGGAGGGAGGGAGGGAGGGAG	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0139 a0001c0010t0001g0139	1	256	0.0039	20	c.-84 others(39): Show c.-84+19274_-84+19293dupCTCCCTCCCTCCCTCCCTCC	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	1/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40626866	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0074 a0001c0002t0001g0074	1	256	0.0039	20	c.-84 others(37): Show c.-84+9592_-84+9611dupGTGTGTGTGTGTGTGTGTGT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	1/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFB_chr16_14066319_14271773	14243864	G G	GTTTGTTT others(13): Show GTTTGTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02895.hp2 HG02897.hp1 others(3): Show HG02809.hp2 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG03195.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012	a0001c0001t0006g0216 a0001c0001t0006g0217 a0001c0001t0007g0209 others(3): Show a0001c0001t0006g0216 a0001c0001t0006g0217 a0001c0001t0007g0209 a0001c0001t0007g0210 a0001c0001t0012g0116 a0001c0001t0012g0117	6	240	0.0250	20	c.108 others(39): Show c.1080-1661_1080-1660insGTTTTTTTTTTTTTTTTTTT	MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	10/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
MRTFB_chr16_14066319_14271773	14243864	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG02040.hp2 HG02083.hp2 others(30): Show HG00423.hp1 HG02040.hp2 HG02083.hp2 HG02129.hp1 HG02135.hp2 HG02148.hp2 HG02155.hp2 HG02486.hp2 HG02523.hp2 HG03139.hp1 HG03688.hp1 HG03942.hp1 NA18947.hp1 NA18948.hp2 NA18953.hp2 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18989.hp1 NA18993.hp1 NA19000.hp1 NA19003.hp1 NA19006.hp1 NA19065.hp2 NA19070.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA20905.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0005 a0001c0001 a0001c0002 a0006c0005	a0001c0001t0010 a0001c0001t0017 a0001c0002t0001 others(4): Show a0001c0001t0010 a0001c0001t0017 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0011 a0006c0005t0002	a0001c0001t0010g0229 a0001c0001t0017g0225 a0001c0002t0001g0206 others(29): Show a0001c0001t0010g0229 a0001c0001t0017g0225 a0001c0002t0001g0206 a0001c0002t0002g0001 a0001c0002t0002g0005 a0001c0002t0002g0007 a0001c0002t0002g0010 a0001c0002t0002g0011 a0001c0002t0002g0025 a0001c0002t0002g0031 a0001c0002t0002g0033 a0001c0002t0002g0034 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0042 a0001c0002t0002g0043 a0001c0002t0002g0045 a0001c0002t0002g0048 a0001c0002t0002g0050 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0119 a0001c0002t0002g0223 a0001c0002t0005g0006 a0001c0002t0005g0018 a0001c0002t0005g0019 a0001c0002t0005g0023 a0001c0002t0011g0041 a0001c0002t0011g0051 a0006c0005t0002g0065	33	240	0.1375	20	c.108 others(39): Show c.1080-1651_1080-1650insTTTTTTTTTTTTTTTTTTTT	MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	10/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
MS4A13_chr11_60510392_60547721	60522231	G G	GATGTATA others(13): Show GATGTATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18970.hp1 NA18979.hp2 NA18970.hp1 NA18979.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0007 a0002c0003 a0003c0007	a0002c0003t0001 a0003c0007t0001 a0002c0003t0001 a0003c0007t0001	a0002c0003t0001g0205 a0003c0007t0001g0204 a0002c0003t0001g0205 a0003c0007t0001g0204	2	422	0.0047	20	c.130 others(37): Show c.130-1664_130-1663insGTATATATATATATATATAT	MS4A13	ENSG00000204979.8	transcript	ENST00000378186.7	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A13_chr11_60510392_60547721	60527410	C C	CTCTGTGT others(13): Show CTCTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0098 a0001c0001t0001g0098	1	422	0.0024	20	c.307 others(37): Show c.307-1954_307-1953insCTGTGTGTGTGTGTGTGTGT	MS4A13	ENSG00000204979.8	transcript	ENST00000378186.7	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A18_chr11_60719720_60750028	60726717	C C	CTTTTATT others(13): Show CTTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03225.hp2 HG06807.hp2 others(6): Show HG02572.hp2 HG03225.hp2 HG06807.hp2 NA18944.hp1 NA18945.hp2 NA18968.hp1 NA19064.hp1 NA19070.hp1 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0004c0006t0008 a0001c0001t0001 a0004c0006t0008	a0001c0001t0001g0021 a0001c0001t0001g0077 a0001c0001t0001g0078 others(2): Show a0001c0001t0001g0021 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0004c0006t0008g0020	9	416	0.0216	20	c.-13 others(37): Show c.-13+1963_-13+1982dupATTTTATTTTATTTTATTTT	MS4A18	ENSG00000214782.8	transcript	ENST00000529108.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A4E_chr11_60195270_60248137	60232284	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp1 HG00741.hp2 others(20): Show HG00323.hp1 HG00438.hp1 HG00741.hp2 HG01243.hp2 HG01943.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02300.hp1 HG02300.hp2 HG02630.hp2 HG02922.hp2 HG03041.hp2 HG03486.hp1 HG04228.hp2 NA18522.hp2 NA18980.hp1 NA18991.hp2 NA19005.hp1 NA19056.hp1 NA19066.hp1 NA19087.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0005 a0001c0001t0015 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0015 a0001c0001t0017 a0001c0007t0001	a0001c0001t0001g0022 a0001c0001t0001g0029 a0001c0001t0001g0096 others(15): Show a0001c0001t0001g0022 a0001c0001t0001g0029 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0142 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0153 a0001c0001t0005g0111 a0001c0001t0015g0110 a0001c0001t0017g0269 a0001c0001t0017g0270 a0001c0007t0001g0013	23	410	0.0561	20	c.-16 others(37): Show c.-16-2233_-16-2214dupGTGTGTGTGTGTGTGTGTGT	MS4A4E	ENSG00000214787.11	transcript	ENST00000651255.1	protein_coding	1/8			chr11	TogoVar
MS4A5_chr11_60424572_60452792	60447307	G G	GTGCTATG others(13): Show GTGCTATGCTATGCTATGCTA	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18946.hp1 NA18953.hp1 others(9): Show NA18939.hp2 NA18946.hp1 NA18953.hp1 NA18967.hp1 NA18978.hp1 NA18994.hp2 NA18999.hp2 NA19000.hp1 NA19062.hp2 NA19077.hp1 NA19082.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0167 others(2): Show a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0002t0001g0024	12	462	0.0260	20	c.493 others(35): Show c.493-298_493-279dupTATGCTATGCTATGCTATGC	MS4A5	ENSG00000166930.7	transcript	ENST00000300190.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A5_chr11_60424572_60452792	60447429	G G	GCTATGCT others(13): Show GCTATGCTATGCTATCCTATT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01074.hp2 HG01257.hp1 others(4): Show HG00099.hp1 HG01074.hp2 HG01257.hp1 HG01975.hp1 HG02735.hp1 HG03669.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0160 a0001c0001t0001g0165 others(2): Show a0001c0001t0001g0027 a0001c0001t0001g0160 a0001c0001t0001g0165 a0001c0001t0001g0171 a0001c0001t0001g0214	7	462	0.0152	20	c.493 others(35): Show c.493-200_493-181dupTCTATGCTATGCTATCCTAT	MS4A5	ENSG00000166930.7	transcript	ENST00000300190.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
MSANTD4_chr11_106002899_106027240	106022839	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 HG01515.hp2 HG02148.hp2 HG00735.hp1 HG01515.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0030 a0001c0001t0001 a0001c0001t0030	a0001c0001t0001g0001 a0001c0001t0030g0100 a0001c0001t0001g0001 a0001c0001t0030g0100	3	384	0.0078	20	c.-20 others(31): Show c.-2029_-2028insAAAAAAAAAAAAAAAAAAAA	MSANTD4	ENSG00000170903.12	transcript	ENST00000301919.9	protein_coding		600		chr11	TogoVar
MSH2_chr2_47398156_47488223	47400302	T T	TGGCCAGG others(13): Show TGGCCAGGCTGATCTTGACCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	370	0.0027	20	c.-28 others(31): Show c.-2890_-2889insGGCCAGGCTGATCTTGACCC	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding		2853		chr2	TogoVar
MSH2_chr2_47398156_47488223	47413548	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01515.hp2 HG01517.hp1 others(8): Show HG00140.hp2 HG01515.hp2 HG01517.hp1 HG02027.hp1 HG02071.hp2 HG02074.hp2 HG02129.hp1 HG02132.hp2 NA18982.hp1 NA19007.hp2 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0003c0005t0001 a0001c0001t0001 a0003c0005t0001	a0001c0001t0001g0135 a0001c0001t0001g0148 a0001c0001t0001g0149 others(8): Show a0001c0001t0001g0135 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0220 a0003c0005t0001g0221	11	370	0.0297	20	c.793 others(35): Show c.793-707_793-688dupTTTTTTTTTTTTTTTTTTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461912	T T	TTTTTCTT others(13): Show TTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	370	0.0027	20	c.138 others(39): Show c.1387-1080_1387-1061dupTCTTTTCTTTTCTTTTCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461966	T T	TCTTTTCT others(13): Show TCTTTTCTTTCCTTTCCTTTC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01109.hp2 HG02258.hp1 HG00642.hp2 HG01109.hp2 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0073 a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0073	3	370	0.0081	20	c.138 others(39): Show c.1387-1061_1387-1060insTCTTTCCTTTCCTTTCCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461966	T T	TCTTTTCT others(13): Show TCTTTTCTTTTCTTTCCTTTC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0288 a0001c0001t0001g0288	1	370	0.0027	20	c.138 others(39): Show c.1387-1061_1387-1060insTCTTTTCTTTCCTTTCCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461966	T T	TCTTTTCT others(13): Show TCTTTTCTTTTCTTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01258.hp2 HG01978.hp2 others(6): Show HG00544.hp1 HG01258.hp2 HG01978.hp2 HG02135.hp2 NA18955.hp1 NA18969.hp1 NA19010.hp1 NA19060.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0031 a0001c0001t0001g0034 a0001c0001t0001g0072 others(6): Show a0001c0001t0001g0031 a0001c0001t0001g0034 a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0295 a0001c0001t0001g0318 a0001c0001t0001g0347 a0001c0004t0001g0045 a0001c0004t0001g0046	9	370	0.0243	20	c.138 others(39): Show c.1387-1061_1387-1060insTCTTTTCTTTTCTTTCCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH3_chr5_80649652_80881815	80692070	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0027 a0007c0008t0027	a0007c0008t0027g0031 a0007c0008t0027g0031	1	362	0.0028	20	c.134 others(41): Show c.1340+12984_1340+13003dupAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692094	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0168	1	362	0.0028	20	c.134 others(41): Show c.1340+13007_1340+13008insAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692122	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00642.hp1 HG01074.hp2 others(6): Show HG00280.hp2 HG00642.hp1 HG01074.hp2 HG01261.hp1 HG01516.hp1 HG02004.hp2 HG03491.hp1 HG03492.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0049 a0001c0001t0002g0067 a0001c0001t0002g0068 others(6): Show a0001c0001t0002g0049 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0084 a0001c0001t0002g0091 a0001c0001t0002g0159 a0001c0001t0002g0172 a0001c0001t0002g0181 a0001c0001t0002g0182	9	362	0.0249	20	c.134 others(41): Show c.1340+13035_1340+13036insAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692150	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0043 a0001c0001t0002g0043	1	362	0.0028	20	c.134 others(41): Show c.1340+13063_1340+13064insAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692250	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02129.hp1 HG03831.hp1 others(3): Show HG02056.hp2 HG02129.hp1 HG03831.hp1 NA19068.hp2 NA19083.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0065 a0001c0001t0002g0080 a0001c0001t0002g0082 others(3): Show a0001c0001t0002g0065 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0002g0093 a0001c0001t0008g0318	6	362	0.0166	20	c.134 others(41): Show c.1340+13163_1340+13164insAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692328	A A	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA19043.hp2 HG02965.hp1 NA19043.hp2	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0005 a0007c0008t0027 a0007c0008t0005 a0007c0008t0027	a0007c0008t0005g0016 a0007c0008t0027g0031 a0007c0008t0005g0016 a0007c0008t0027g0031	2	362	0.0055	20	c.134 others(41): Show c.1340+13241_1340+13242insAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80729430	A A	AAGTGTGT others(13): Show AAGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0045 a0001c0002t0001g0045	1	362	0.0028	20	c.156 others(37): Show c.1568+465_1568+466insAGTGTGTGTGTGTGTGTGTG	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	10/23			chr5	TogoVar
MSH3_chr5_80649652_80881815	80750078	A A	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01993.hp2 HG02280.hp1 others(4): Show HG01099.hp2 HG01993.hp2 HG02280.hp1 HG02809.hp1 HG03491.hp2 HG03654.hp2 NA19030.hp2	a0002 a0007 a0034 a0002 a0007 a0034	a0002c0003 a0007c0008 a0034c0030 a0002c0003 a0007c0008 a0034c0030	a0002c0003t0003 a0002c0003t0014 a0002c0003t0031 others(2): Show a0002c0003t0003 a0002c0003t0014 a0002c0003t0031 a0007c0008t0005 a0034c0030t0009	a0002c0003t0003g0193 a0002c0003t0003g0200 a0002c0003t0003g0204 others(4): Show a0002c0003t0003g0193 a0002c0003t0003g0200 a0002c0003t0003g0204 a0002c0003t0014g0206 a0002c0003t0031g0210 a0007c0008t0005g0017 a0034c0030t0009g0219	7	362	0.0193	20	c.176 others(39): Show c.1763+5478_1763+5497dupGTGTGTGTGTGTGTGTGTGT	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80762790	T T	TTTATGTT others(13): Show TTTATGTTATGTTATGTTATG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02922.hp1 NA19030.hp1 HG00099.hp1 HG02922.hp1 NA19030.hp1	a0002 a0005 a0013 a0002 a0005 a0013	a0002c0003 a0005c0006 a0013c0011 a0002c0003 a0005c0006 a0013c0011	a0002c0003t0030 a0005c0006t0003 a0013c0011t0005 a0002c0003t0030 a0005c0006t0003 a0013c0011t0005	a0002c0003t0030g0195 a0005c0006t0003g0354 a0013c0011t0005g0029 a0002c0003t0030g0195 a0005c0006t0003g0354 a0013c0011t0005g0029	3	362	0.0083	20	c.189 others(39): Show c.1896+1137_1896+1156dupGTTATGTTATGTTATGTTAT	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80762790	T T	TTTATTTT others(13): Show TTTATTTTATGTTATGTTATG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00544.hp1 HG00609.hp2 others(17): Show HG00099.hp2 HG00544.hp1 HG00609.hp2 HG00735.hp2 HG01169.hp1 HG01255.hp1 HG02015.hp1 HG02056.hp1 HG02135.hp1 HG02148.hp1 HG02683.hp2 HG02723.hp2 HG03209.hp1 NA18946.hp1 NA18949.hp1 NA18960.hp1 NA18979.hp2 NA18984.hp1 NA18998.hp1 NA19064.hp1	a0003 a0007 a0022 others(2): Show a0003 a0007 a0022 a0023 a0024	a0003c0004 a0007c0008 a0007c0035 others(3): Show a0003c0004 a0007c0008 a0007c0035 a0022c0044 a0023c0043 a0024c0041	a0003c0004t0004 a0003c0004t0021 a0003c0004t0024 others(5): Show a0003c0004t0004 a0003c0004t0021 a0003c0004t0024 a0007c0008t0010 a0007c0035t0010 a0022c0044t0004 a0023c0043t0004 a0024c0041t0028	a0003c0004t0004g0231 a0003c0004t0004g0233 a0003c0004t0004g0234 others(17): Show a0003c0004t0004g0231 a0003c0004t0004g0233 a0003c0004t0004g0234 a0003c0004t0004g0240 a0003c0004t0004g0249 a0003c0004t0004g0253 a0003c0004t0004g0254 a0003c0004t0004g0262 a0003c0004t0004g0265 a0003c0004t0004g0267 a0003c0004t0004g0278 a0003c0004t0004g0298 a0003c0004t0004g0303 a0003c0004t0021g0257 a0003c0004t0024g0245 a0007c0008t0010g0053 a0007c0035t0010g0139 a0022c0044t0004g0256 a0023c0043t0004g0232 a0024c0041t0028g0258	20	362	0.0553	20	c.189 others(39): Show c.1896+1116_1896+1117insTTTATGTTATGTTATGTTAT	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80762825	G G	GTTATGTT others(13): Show GTTATGTTATGTTATGTTATT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02083.hp1 HG02451.hp2 others(6): Show HG01123.hp1 HG02083.hp1 HG02451.hp2 HG02523.hp1 HG03710.hp1 NA18948.hp1 NA18950.hp2 NA19001.hp2 NA19066.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0002c0003 a0004c0005 a0001c0002 a0002c0003 a0004c0005	a0001c0002t0001 a0001c0002t0006 a0002c0003t0003 others(1): Show a0001c0002t0001 a0001c0002t0006 a0002c0003t0003 a0004c0005t0003	a0001c0002t0001g0134 a0001c0002t0001g0142 a0001c0002t0001g0147 others(6): Show a0001c0002t0001g0134 a0001c0002t0001g0142 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0163 a0001c0002t0006g0021 a0002c0003t0003g0003 a0002c0003t0003g0006 a0004c0005t0003g0309	9	362	0.0249	20	c.189 others(39): Show c.1896+1156_1896+1157insGTTATGTTATTTTATGTTAT	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80784212	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01952.hp1 HG01981.hp1 others(14): Show HG00673.hp1 HG01952.hp1 HG01981.hp1 HG02027.hp1 HG02300.hp1 HG02523.hp2 HG04184.hp2 NA18945.hp1 NA18948.hp1 NA18950.hp2 NA18970.hp2 NA19001.hp2 NA19070.hp1 NA19079.hp1 NA19084.hp1 NA19087.hp1 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0095 a0001c0002t0001g0096 a0001c0002t0001g0097 others(14): Show a0001c0002t0001g0095 a0001c0002t0001g0096 a0001c0002t0001g0097 a0001c0002t0001g0100 a0001c0002t0001g0110 a0001c0002t0001g0112 a0001c0002t0001g0122 a0001c0002t0001g0131 a0001c0002t0001g0137 a0001c0002t0001g0140 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0156 a0001c0002t0001g0163 a0001c0002t0001g0174 a0001c0002t0001g0175	17	362	0.0470	20	c.243 others(39): Show c.2436-3345_2436-3326dupAAAAAAAAAAAAAAAAAAAA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80808858	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01891.hp1 HG02015.hp1 others(4): Show HG01255.hp1 HG01891.hp1 HG02015.hp1 HG03098.hp2 NA18948.hp2 NA18979.hp2 NA18995.hp2	a0003 a0008 a0015 a0003 a0008 a0015	a0003c0004 a0008c0010 a0015c0021 a0003c0004 a0008c0010 a0015c0021	a0003c0004t0004 a0003c0004t0021 a0008c0010t0009 others(1): Show a0003c0004t0004 a0003c0004t0021 a0008c0010t0009 a0015c0021t0004	a0003c0004t0004g0240 a0003c0004t0004g0254 a0003c0004t0004g0345 others(4): Show a0003c0004t0004g0240 a0003c0004t0004g0254 a0003c0004t0004g0345 a0003c0004t0021g0257 a0008c0010t0009g0216 a0008c0010t0009g0221 a0015c0021t0004g0271	7	362	0.0193	20	c.265 others(39): Show c.2656-4720_2656-4701dupTATATATATATATATATATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80808873	A A	ATATATAT others(13): Show ATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0028 a0028	a0028c0034 a0028c0034	a0028c0034t0005 a0028c0034t0005	a0028c0034t0005g0180 a0028c0034t0005g0180	1	362	0.0028	20	c.265 others(39): Show c.2656-4701_2656-4700insTATATATATGTATATATATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80810168	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0034 a0034	a0034c0030 a0034c0030	a0034c0030t0009 a0034c0030t0009	a0034c0030t0009g0219 a0034c0030t0009g0219	1	362	0.0028	20	c.265 others(39): Show c.2656-3413_2656-3412insTATATATATATATATATATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80810172	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG02055.hp1 HG03579.hp2 others(4): Show HG01516.hp2 HG02055.hp1 HG03579.hp2 HG04115.hp1 HG06807.hp2 NA19058.hp2 NA20805.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0004c0005	a0001c0001t0005 a0001c0002t0005 a0002c0003t0003 others(1): Show a0001c0001t0005 a0001c0002t0005 a0002c0003t0003 a0004c0005t0007	a0001c0001t0005g0025 a0001c0002t0005g0037 a0002c0003t0003g0187 others(4): Show a0001c0001t0005g0025 a0001c0002t0005g0037 a0002c0003t0003g0187 a0004c0005t0007g0279 a0004c0005t0007g0282 a0004c0005t0007g0294 a0004c0005t0007g0308	7	362	0.0193	20	c.265 others(39): Show c.2656-3408_2656-3389dupTATATATATATATATATATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH4_chr1_75791882_75918242	75854007	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG04204.hp1 HG02148.hp1 HG04204.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0081 a0005c0006t0001g0082 a0005c0006t0001g0081 a0005c0006t0001g0082	2	332	0.0060	20	c.123 others(39): Show c.1230+5732_1230+5733insATATATATATATATATATAT	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75854011	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG06807.hp2 NA18977.hp2 others(1): Show HG03579.hp2 HG06807.hp2 NA18977.hp2 NA20752.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0086 a0002c0003t0001g0091 a0002c0003t0001g0108 others(1): Show a0002c0003t0001g0086 a0002c0003t0001g0091 a0002c0003t0001g0108 a0002c0003t0001g0116	4	332	0.0121	20	c.123 others(39): Show c.1230+5736_1230+5737insATATATATATATATATATAT	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75854013	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03491.hp2 NA20752.hp1 HG03139.hp2 HG03491.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0195 a0001c0001t0001g0201 a0002c0003t0001g0129 a0001c0001t0001g0195 a0001c0001t0001g0201 a0002c0003t0001g0129	3	332	0.0090	20	c.123 others(39): Show c.1230+5752_1230+5753insATATATATATATATATATAT	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75885051	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03130.hp2 HG03540.hp1 HG02818.hp1 HG03130.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0036 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0036 a0001c0002t0001g0042 a0001c0002t0001g0043	3	332	0.0090	20	c.210 others(39): Show c.2107+1231_2107+1232insATATATATATATATATATAT	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	15/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75885059	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0001	a0003c0005t0001g0177 a0003c0005t0001g0177	1	332	0.0030	20	c.210 others(39): Show c.2107+1254_2107+1255insTATATATATATATATATATA	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	15/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75907684	C C	CTCTCTAT others(13): Show CTCTCTATACATATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00423.hp2 others(19): Show HG00099.hp2 HG00280.hp2 HG00423.hp2 HG00642.hp1 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01433.hp1 HG01978.hp1 HG02055.hp1 HG02257.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp2 HG02809.hp1 HG02818.hp2 HG03453.hp1 HG03516.hp1 HG03704.hp1 NA18522.hp2 NA19043.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0003 a0002c0003t0001g0085 a0002c0003t0001g0089 others(19): Show a0002c0003t0001g0003 a0002c0003t0001g0085 a0002c0003t0001g0089 a0002c0003t0001g0092 a0002c0003t0001g0093 a0002c0003t0001g0094 a0002c0003t0001g0102 a0002c0003t0001g0104 a0002c0003t0001g0107 a0002c0003t0001g0112 a0002c0003t0001g0115 a0002c0003t0001g0117 a0002c0003t0001g0118 a0002c0003t0001g0121 a0002c0003t0001g0126 a0002c0003t0001g0133 a0002c0003t0001g0134 a0002c0003t0001g0136 a0002c0003t0001g0137 a0002c0003t0001g0143 a0002c0003t0001g0145 a0002c0003t0001g0147	22	332	0.0663	20	c.262 others(39): Show c.2620-5011_2620-5010insCTCTATACATATATATATAT	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH5_chr6_31735005_31767676	31746080	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01074.hp2 others(23): Show HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01109.hp1 HG01168.hp1 HG01256.hp1 HG01258.hp2 HG01891.hp1 HG02040.hp1 HG02148.hp1 HG02273.hp2 HG02486.hp1 HG02523.hp1 HG02738.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG03098.hp1 HG03486.hp1 NA18959.hp1 NA19000.hp2 NA19005.hp2 NA19064.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0002c0003t0001 a0001c0002t0001 a0002c0003t0001	a0001c0002t0001g0004 a0001c0002t0001g0012 a0001c0002t0001g0021 others(14): Show a0001c0002t0001g0004 a0001c0002t0001g0012 a0001c0002t0001g0021 a0001c0002t0001g0065 a0001c0002t0001g0067 a0001c0002t0001g0098 a0001c0002t0001g0178 a0001c0002t0001g0317 a0001c0002t0001g0322 a0002c0003t0001g0010 a0002c0003t0001g0042 a0002c0003t0001g0044 a0002c0003t0001g0046 a0002c0003t0001g0054 a0002c0003t0001g0089 a0002c0003t0001g0104 a0002c0003t0001g0107	26	397	0.0655	20	c.766 others(35): Show c.766+776_766+795dupTGTGTGTGTGTGTGTGTGTG	MSH5	ENSG00000204410.16	transcript	ENST00000375750.9	protein_coding	9/24		INFO_REALIGN_3_PRIME	chr6	TogoVar
MSH6_chr2_47778145_47811953	47788906	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTGTTTTT	intron_variant intron_variant	MODIFIER	NA18977.hp2 NA19089.hp2 NA18977.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0205 a0002c0003t0001g0207 a0002c0003t0001g0205 a0002c0003t0001g0207	2	390	0.0051	20	c.261 others(37): Show c.261-2021_261-2020insTTTTTTTTTTTTTTGTTTTT	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9			chr2	TogoVar
MSH6_chr2_47778145_47811953	47788906	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0318 a0002c0003t0001g0318	1	390	0.0026	20	c.261 others(37): Show c.261-2021_261-2020insTTTTTTTTTTTTTTTTTTTT	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9			chr2	TogoVar

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