Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02071.hp2 NA18968.hp1 others(1): Show HG02004.hp1 HG02071.hp2 NA18968.hp1 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0226 a0001c0001t0002g0155 a0001c0001t0002g0319 others(1): Show a0001c0001t0001g0226 a0001c0001t0002g0155 a0001c0001t0002g0319 a0001c0001t0003g0318	4	338	0.0118	20	c.54+ others(35): Show c.54+7069_54+7070insCTCTCTCTCTCTATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01261.hp2 NA19012.hp2 NA19076.hp1 HG01261.hp2 NA19012.hp2 NA19076.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0002 a0002c0004t0013 a0001c0001t0002 a0002c0004t0013	a0001c0001t0002g0080 a0001c0001t0002g0181 a0002c0004t0013g0205 a0001c0001t0002g0080 a0001c0001t0002g0181 a0002c0004t0013g0205	3	338	0.0089	20	c.54+ others(35): Show c.54+7069_54+7070insCTCTCTCTCTATATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02080.hp2 NA18943.hp2 others(1): Show HG01071.hp1 HG02080.hp2 NA18943.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0071 a0001c0001t0001g0223 a0001c0001t0002g0145 others(1): Show a0001c0001t0001g0071 a0001c0001t0001g0223 a0001c0001t0002g0145 a0001c0001t0003g0264	4	338	0.0118	20	c.54+ others(35): Show c.54+7069_54+7070insCTCTCTCTATATATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01515.hp2 HG02897.hp1 others(1): Show HG01358.hp2 HG01515.hp2 HG02897.hp1 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0255 a0001c0001t0002g0190 a0001c0001t0002g0222 others(1): Show a0001c0001t0001g0255 a0001c0001t0002g0190 a0001c0001t0002g0222 a0001c0001t0003g0208	4	338	0.0118	20	c.54+ others(35): Show c.54+7069_54+7070insCTCTCTATATATATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATATATATATAGAG	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02004.hp2 HG02040.hp1 others(1): Show HG01981.hp2 HG02004.hp2 HG02040.hp1 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0220 a0001c0001t0001g0246 a0001c0001t0001g0248 others(1): Show a0001c0001t0001g0220 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0003g0247	4	338	0.0118	20	c.54+ others(35): Show c.54+7069_54+7070insCTCTATATATATATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN1_chr1_31174745_31244887	31232424	T T	TATATATA others(13): Show TATATATATATATATATATAG	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19010.hp2 NA19011.hp2 NA19003.hp1 NA19010.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0218 a0001c0001t0003g0313 a0001c0001t0003g0333 a0001c0001t0001g0218 a0001c0001t0003g0313 a0001c0001t0003g0333	3	338	0.0089	20	c.54+ others(35): Show c.54+7069_54+7070insCTATATATATATATATATAT	NKAIN1	ENSG00000084628.10	transcript	ENST00000373736.7	protein_coding	1/6			chr1	TogoVar
NKAIN2_chr6_123798865_124830640	123955590	T T	TTTTTATT others(13): Show TTTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02895.hp1 NA21309.hp2 HG02615.hp1 HG02895.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0018 a0001c0001t0001g0028 a0001c0001t0001g0002 a0001c0001t0001g0018 a0001c0001t0001g0028	3	66	0.0455	20	c.54+ others(39): Show c.54+151366_54+151385dupATTTTATTTTATTTTATTTT	NKAIN2	ENSG00000188580.16	transcript	ENST00000368417.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
NKAIN2_chr6_123798865_124830640	124406013	G G	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02622.hp2 HG02965.hp1 others(7): Show HG02055.hp1 HG02622.hp2 HG02965.hp1 HG03139.hp1 HG03540.hp1 HG03579.hp2 HG03688.hp1 NA18522.hp2 NA18906.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0002t0004 a0001c0002t0009	a0001c0001t0001g0003 a0001c0001t0001g0065 a0001c0001t0002g0060 others(7): Show a0001c0001t0001g0003 a0001c0001t0001g0065 a0001c0001t0002g0060 a0001c0001t0002g0066 a0001c0001t0003g0024 a0001c0001t0003g0036 a0001c0001t0004g0061 a0001c0001t0008g0051 a0001c0002t0004g0063 a0001c0002t0009g0050	10	66	0.1515	20	c.273 others(39): Show c.273+50669_273+50688dupGTGTGTGTGTGTGTGTGTGT	NKAIN2	ENSG00000188580.16	transcript	ENST00000368417.6	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
NKAIN2_chr6_123798865_124830640	124815225	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02486.hp2 HG00741.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0056 a0001c0002t0001g0025 a0001c0001t0002g0056 a0001c0002t0001g0025	2	66	0.0303	20	c.536 others(37): Show c.536-3146_536-3145insATATATATATATATATATAT	NKAIN2	ENSG00000188580.16	transcript	ENST00000368417.6	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
NKAIN3_chr8_62243854_62989904	62451286	T T	TCCCTCCC others(13): Show TCCCTCCCCTCCCGTCCCCTC	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG01346.hp2 HG01168.hp1 HG01169.hp1 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0086 a0001c0001t0001 a0001c0001t0086	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0086g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0086g0003	3	144	0.0208	20	c.55- others(39): Show c.55-128242_55-128223dupCCGTCCCCTCCCCTCCCCTC	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62454301	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG01069.hp1 others(5): Show HG00140.hp2 HG00323.hp1 HG01069.hp1 HG01081.hp2 HG01346.hp1 HG02630.hp2 NA18948.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0063 a0001c0001t0097 a0001c0002t0001 others(5): Show a0001c0001t0063 a0001c0001t0097 a0001c0002t0001 a0001c0002t0002 a0001c0002t0052 a0001c0002t0054 a0001c0002t0060 a0001c0002t0061	a0001c0001t0063g0056 a0001c0001t0097g0127 a0001c0002t0001g0073 others(5): Show a0001c0001t0063g0056 a0001c0001t0097g0127 a0001c0002t0001g0073 a0001c0002t0002g0103 a0001c0002t0052g0055 a0001c0002t0054g0021 a0001c0002t0060g0024 a0001c0002t0061g0006	8	144	0.0556	20	c.55- others(39): Show c.55-125235_55-125216dupAAAAAAAAAAAAAAAAAAAA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62462018	A A	ATGGACAC others(13): Show ATGGACACATTATAATTAAAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02970.hp2 HG01109.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0069 a0001c0001t0004 a0001c0001t0069	a0001c0001t0004g0042 a0001c0001t0069g0075 a0001c0001t0004g0042 a0001c0001t0069g0075	2	144	0.0139	20	c.55- others(39): Show c.55-117519_55-117500dupGGACACATTATAATTAAACT	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62581110	T T	TATAAAAT others(13): Show TATAAAATAAAATAAAATAAA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG01346.hp2 others(9): Show HG01168.hp1 HG01169.hp1 HG01346.hp2 HG02004.hp2 HG02109.hp1 HG02451.hp2 HG02630.hp1 HG02809.hp1 HG02965.hp1 HG02976.hp1 HG03209.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0008 a0001c0001t0016 others(6): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0016 a0001c0001t0028 a0001c0001t0029 a0001c0001t0067 a0001c0001t0086 a0001c0001t0096 a0001c0002t0094	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0092 others(9): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0092 a0001c0001t0008g0097 a0001c0001t0016g0026 a0001c0001t0016g0027 a0001c0001t0028g0044 a0001c0001t0029g0053 a0001c0001t0067g0071 a0001c0001t0086g0003 a0001c0001t0096g0128 a0001c0002t0094g0079	12	144	0.0833	20	c.192 others(37): Show c.192+1476_192+1495dupTAAAATAAAATAAAATAAAA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62729023	C C	CAAACCAA others(13): Show CAAACCAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02886.hp2 HG01167.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0031 a0001c0002t0030 a0001c0001t0031 a0001c0002t0030	a0001c0001t0031g0059 a0001c0002t0030g0066 a0001c0001t0031g0059 a0001c0002t0030g0066	2	144	0.0139	20	c.274 others(39): Show c.274-17909_274-17908insAAACCAAAAAAAAAAAAAAA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	3/6			chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62741370	G G	GGAAGGAA others(13): Show GGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0100 a0001c0001t0018g0100	1	144	0.0069	20	c.274 others(37): Show c.274-5543_274-5542insAGAAGGAAGGAAGGAAGGAA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62796789	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0045 a0001c0002t0045	a0001c0002t0045g0020 a0001c0002t0045g0020	1	144	0.0069	20	c.471 others(39): Show c.471+49668_471+49687dupCACACACACACACACACACA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62819154	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0070 a0001c0001t0020g0070	1	144	0.0069	20	c.471 others(39): Show c.471+72038_471+72039insTATATACATATATATATATA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62845285	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01168.hp2 HG01361.hp2 others(3): Show HG01081.hp2 HG01168.hp2 HG01361.hp2 HG02451.hp1 HG02896.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0063 a0001c0001t0074 others(3): Show a0001c0001t0007 a0001c0001t0063 a0001c0001t0074 a0001c0002t0002 a0001c0002t0003 a0001c0002t0044	a0001c0001t0007g0132 a0001c0001t0063g0056 a0001c0001t0074g0144 others(3): Show a0001c0001t0007g0132 a0001c0001t0063g0056 a0001c0001t0074g0144 a0001c0002t0002g0103 a0001c0002t0003g0034 a0001c0002t0044g0061	6	144	0.0417	20	c.472 others(39): Show c.472-73159_472-73140dupTATATATATATATATATATA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN3_chr8_62243854_62989904	62859508	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp1 HG02451.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0067 a0001c0001t0082 a0001c0001t0067 a0001c0001t0082	a0001c0001t0067g0071 a0001c0001t0082g0078 a0001c0001t0067g0071 a0001c0001t0082g0078	2	144	0.0139	20	c.472 others(39): Show c.472-58932_472-58931insAAAAAAAAAAAAAAAAAAAA	NKAIN3	ENSG00000185942.13	transcript	ENST00000623646.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
NKAIN4_chr20_63235784_63259463	63242405	G G	GTGGATGG others(13): Show GTGGATGGATGGACGGACGGA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02280.hp2 HG02615.hp2 others(7): Show HG01167.hp1 HG02280.hp2 HG02615.hp2 HG02818.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03225.hp1 HG03453.hp2	a0001 a0001	a0001c0004 a0001c0014 a0001c0004 a0001c0014	a0001c0004t0002 a0001c0004t0005 a0001c0004t0013 others(1): Show a0001c0004t0002 a0001c0004t0005 a0001c0004t0013 a0001c0014t0002	a0001c0004t0002g0009 a0001c0004t0005g0030 a0001c0004t0013g0111 others(1): Show a0001c0004t0002g0009 a0001c0004t0005g0030 a0001c0004t0013g0111 a0001c0014t0002g0055	10	354	0.0283	20	c.617 others(35): Show c.617+133_617+134insTCCGTCCGTCCATCCATCCA	NKAIN4	ENSG00000101198.15	transcript	ENST00000370316.8	protein_coding	6/6			chr20	TogoVar
NKAIN4_chr20_63235784_63259463	63242405	G G	GTGGATGG others(13): Show GTGGATGGATGGACGGATGGA	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0187 a0002c0002t0001g0187	1	354	0.0028	20	c.617 others(35): Show c.617+114_617+133dupTCCATCCGTCCATCCATCCA	NKAIN4	ENSG00000101198.15	transcript	ENST00000370316.8	protein_coding	6/6			chr20	TogoVar
NKAIN4_chr20_63235784_63259463	63246714	C C	CAGCCGTG others(13): Show CAGCCGTGCTGCAGTCACATT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01346.hp2 HG02055.hp2 others(8): Show HG00642.hp1 HG01346.hp2 HG02055.hp2 HG02056.hp1 HG02109.hp1 HG02280.hp1 HG02615.hp1 HG02717.hp1 HG02818.hp2 HG02922.hp1 NA19240.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0016 a0002c0002 a0008c0016	a0002c0002t0003 a0002c0002t0012 a0008c0016t0003 a0002c0002t0003 a0002c0002t0012 a0008c0016t0003	a0002c0002t0003g0016 a0002c0002t0003g0042 a0002c0002t0003g0108 others(6): Show a0002c0002t0003g0016 a0002c0002t0003g0042 a0002c0002t0003g0108 a0002c0002t0003g0118 a0002c0002t0003g0122 a0002c0002t0003g0171 a0002c0002t0003g0195 a0002c0002t0012g0043 a0008c0016t0003g0044	11	354	0.0311	20	c.471 others(35): Show c.471+844_471+863dupAATGTGACTGCAGCACGGCT	NKAIN4	ENSG00000101198.15	transcript	ENST00000370316.8	protein_coding	4/6			chr20	TogoVar
NKAPL_chr6_28254297_28265958	28261819	T T	TCACACAC others(13): Show TCACACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0000 a0002c0003t0001g0000	1	420	0.0024	20	c.12 others(31): Show c.1239_*1240insCACACACACACACACACACA	NKAPL	ENSG00000189134.4	transcript	ENST00000343684.4	protein_coding		862		chr6	TogoVar
NKD1_chr16_50543396_50654249	50560823	C C	CATCTATC others(13): Show CATCTATCTATCTATCTATCT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG00597.hp1 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0030 a0001c0001t0001 a0001c0001t0030	a0001c0001t0001g0117 a0001c0001t0030g0150 a0001c0001t0001g0117 a0001c0001t0030g0150	2	212	0.0094	20	c.192 others(39): Show c.192+11290_192+11309dupTCTATCTATCTATCTATCTA	NKD1	ENSG00000140807.7	transcript	ENST00000268459.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr16	TogoVar
NKD1_chr16_50543396_50654249	50589694	T T	TTTCTCTT others(13): Show TTTCTCTTCTCTTCTCTTCTC	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0105 a0001c0001t0029g0105	1	212	0.0047	20	c.193 others(39): Show c.193-18548_193-18529dupTCTCTTCTCTTCTCTTCTCT	NKD1	ENSG00000140807.7	transcript	ENST00000268459.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr16	TogoVar
NKD1_chr16_50543396_50654249	50589761	T T	TCTCTCCT others(13): Show TCTCTCCTCTCCTCTCCTCTC	intron_variant intron_variant	MODIFIER	HG02257.hp2 NA19240.hp1 HG02257.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0037 a0001c0001t0033 a0001c0001t0037	a0001c0001t0033g0016 a0001c0001t0037g0081 a0001c0001t0033g0016 a0001c0001t0037g0081	2	212	0.0094	20	c.193 others(39): Show c.193-18482_193-18463dupCTCTCCTCTCCTCTCCTCTC	NKD1	ENSG00000140807.7	transcript	ENST00000268459.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr16	TogoVar
NKD2_chr5_1003802_1043943	1004191	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0108 a0001c0001t0003g0108	1	319	0.0031	20	c.-48 others(31): Show c.-4867_-4866insGTGTGTGTGTGTGTGTGTGT	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding		4610		chr5	TogoVar
NKD2_chr5_1003802_1043943	1036851	A A	AGCAGGCA others(13): Show AGCAGGCAGTGTGGATGGCAG	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02523.hp2 HG02602.hp1 others(6): Show HG02071.hp1 HG02523.hp2 HG02602.hp1 HG03540.hp1 HG04115.hp1 NA18962.hp1 NA19064.hp2 NA19074.hp2 NA19091.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0013 a0001c0001 a0009c0013	a0001c0001t0007 a0009c0013t0017 a0001c0001t0007 a0009c0013t0017	a0001c0001t0007g0027 a0001c0001t0007g0077 a0001c0001t0007g0256 others(5): Show a0001c0001t0007g0027 a0001c0001t0007g0077 a0001c0001t0007g0256 a0001c0001t0007g0257 a0001c0001t0007g0258 a0001c0001t0007g0259 a0001c0001t0007g0260 a0009c0013t0017g0098	9	319	0.0282	20	c.787 others(35): Show c.787+486_787+505dupAGGCAGGCAGTGTGGATGGC	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
NKD2_chr5_1003802_1043943	1042612	A A	ATTAGTGT others(13): Show ATTAGTGTGTGAATGAGTGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(285): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19057.hp1 NA19057.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009	a0001c0001 a0001c0002 a0001c0005 others(14): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0008 a0001c0010 a0001c0012 a0001c0016 a0001c0017 a0002c0003 a0003c0004 a0004c0007 a0005c0009 a0006c0015 a0007c0014 a0008c0011 a0009c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(34): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0026 a0001c0002t0001 a0001c0002t0003 a0001c0005t0011 a0001c0006t0009 a0001c0008t0023 a0001c0008t0024 a0001c0010t0001 a0001c0012t0001 a0001c0016t0002 a0001c0017t0002 a0002c0003t0001 a0002c0003t0002 a0003c0004t0001 a0003c0004t0025 a0004c0007t0006 a0005c0009t0002 a0006c0015t0001 a0007c0014t0018 a0008c0011t0016 a0009c0013t0017	a0001c0001t0001g0001 a0001c0001t0001g0010 a0001c0001t0001g0011 others(247): Show a0001c0001t0001g0001 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0062 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0137 a0001c0001t0001g0144 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0168 a0001c0001t0001g0177 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0002g0005 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0031 a0001c0001t0002g0042 a0001c0001t0002g0045 a0001c0001t0002g0103 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0192 a0001c0001t0002g0212 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0002g0261 a0001c0001t0002g0264 a0001c0001t0003g0002 a0001c0001t0003g0013 a0001c0001t0003g0107 a0001c0001t0003g0108 a0001c0001t0003g0109 a0001c0001t0003g0115 a0001c0001t0003g0118 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0005g0003 a0001c0001t0005g0080 a0001c0001t0005g0081 a0001c0001t0005g0089 a0001c0001t0005g0090 a0001c0001t0005g0091 a0001c0001t0005g0093 a0001c0001t0005g0095 a0001c0001t0006g0265 a0001c0001t0006g0266 a0001c0001t0006g0267 a0001c0001t0006g0268 a0001c0001t0006g0269 a0001c0001t0006g0270 a0001c0001t0006g0271 a0001c0001t0007g0027 a0001c0001t0007g0077 a0001c0001t0007g0256 a0001c0001t0007g0257 a0001c0001t0007g0258 a0001c0001t0007g0259 a0001c0001t0007g0260 a0001c0001t0008g0082 a0001c0001t0008g0086 a0001c0001t0008g0087 a0001c0001t0008g0088 a0001c0001t0009g0083 a0001c0001t0009g0084 a0001c0001t0009g0085 a0001c0001t0009g0096 a0001c0001t0010g0116 a0001c0001t0012g0119 a0001c0001t0012g0120 a0001c0001t0012g0123 a0001c0001t0013g0073 a0001c0001t0013g0074 a0001c0001t0013g0075 a0001c0001t0014g0148 a0001c0001t0014g0149 a0001c0001t0015g0117 a0001c0001t0020g0202 a0001c0001t0021g0010 a0001c0001t0022g0199 a0001c0001t0026g0024 a0001c0002t0001g0185 a0001c0002t0001g0194 a0001c0002t0003g0006 a0001c0002t0003g0054 a0001c0002t0003g0055 a0001c0002t0003g0056 a0001c0002t0003g0110 a0001c0002t0003g0262 a0001c0005t0011g0002 a0001c0005t0011g0114 a0001c0006t0009g0072 a0001c0006t0009g0097 a0001c0008t0023g0021 a0001c0008t0024g0021 a0001c0010t0001g0187 a0001c0010t0001g0210 a0001c0012t0001g0012 a0001c0016t0002g0182 a0001c0017t0002g0016 a0002c0003t0001g0034 a0002c0003t0001g0040 a0002c0003t0001g0041 a0002c0003t0001g0208 a0002c0003t0001g0211 a0002c0003t0002g0019 a0002c0003t0002g0155 a0003c0004t0001g0099 a0003c0004t0001g0100 a0003c0004t0001g0101 a0003c0004t0025g0102 a0004c0007t0006g0078 a0004c0007t0006g0079 a0005c0009t0002g0249 a0006c0015t0001g0231 a0007c0014t0018g0104 a0008c0011t0016g0263 a0009c0013t0017g0098	288	319	0.9028	20	c.42 others(31): Show c.4239_*4240insTTAGTGTGTGAATGAGTGGG	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding		3670		chr5	TogoVar
NKD2_chr5_1003802_1043943	1043644	G G	GTGGGTTA others(13): Show GTGGGTTAGTGTGTGAATGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp1 HG02886.hp1 HG01261.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0062 a0001c0001t0003g0108 a0001c0001t0001g0062 a0001c0001t0003g0108	2	319	0.0063	20	c.52 others(31): Show c.5271_*5272insTGGGTTAGTGTGTGAATGAA	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding		4702		chr5	TogoVar
NKD2_chr5_1003802_1043943	1043647	G G	GGTTAGTG others(13): Show GGTTAGTGTGTGAATGGGTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0004 a0001c0001t0010g0004	1	319	0.0031	20	c.52 others(31): Show c.5274_*5275insGTTAGTGTGTGAATGGGTGA	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding		4705		chr5	TogoVar
NKD2_chr5_1003802_1043943	1043650	T T	TAGTGTGT others(13): Show TAGTGTGTGAATGAATGGGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	319	0.0031	20	c.52 others(31): Show c.5277_*5278insAGTGTGTGAATGAATGGGTG	NKD2	ENSG00000145506.14	transcript	ENST00000296849.10	protein_coding		4708		chr5	TogoVar
NKTR_chr3_42595686_42653735	42604659	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0008 a0008	a0008c0011 a0008c0011	a0008c0011t0026 a0008c0011t0026	a0008c0011t0026g0288 a0008c0011t0026g0288	1	352	0.0028	20	c.58+ others(35): Show c.58+3615_58+3634dupTTTTTTTTTTTTTTTTTTTT	NKTR	ENSG00000114857.19	transcript	ENST00000232978.13	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
NKTR_chr3_42595686_42653735	42607969	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0233 a0001c0001t0002g0233	1	352	0.0028	20	c.58+ others(35): Show c.58+6929_58+6948dupTTTTTTTTTTTTTTTTTTTT	NKTR	ENSG00000114857.19	transcript	ENST00000232978.13	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
NLGN1_chr3_173392744_174299372	173753944	A A	AATAATAT others(13): Show AATAATATAATATAATATAAT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02523.hp2 HG02572.hp1 others(2): Show HG02109.hp1 HG02523.hp2 HG02572.hp1 HG02818.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0025 a0001c0001t0039	a0001c0001t0001g0022 a0001c0001t0004g0024 a0001c0001t0008g0042 others(2): Show a0001c0001t0001g0022 a0001c0001t0004g0024 a0001c0001t0008g0042 a0001c0001t0025g0002 a0001c0001t0039g0006	5	44	0.1136	20	c.554 others(39): Show c.554-53723_554-53704dupAATATAATATAATATAATAT	NLGN1	ENSG00000169760.18	transcript	ENST00000695368.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
NLGN1_chr3_173392744_174299372	173762965	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0002 a0001c0001t0025g0002	1	44	0.0227	20	c.554 others(39): Show c.554-44699_554-44680dupCACACACACACACACACACA	NLGN1	ENSG00000169760.18	transcript	ENST00000695368.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
NLGN1_chr3_173392744_174299372	173917841	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02572.hp2 HG02717.hp1 HG02055.hp1 HG02572.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0001t0028 a0001c0005t0035 a0001c0001t0003 a0001c0001t0028 a0001c0005t0035	a0001c0001t0003g0026 a0001c0001t0028g0029 a0001c0005t0035g0016 a0001c0001t0003g0026 a0001c0001t0028g0029 a0001c0005t0035g0016	3	44	0.0682	20	c.706 others(41): Show c.706+110019_706+110038dupGTGTGTGTGTGTGTGTGTGT	NLGN1	ENSG00000169760.18	transcript	ENST00000695368.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
NLGN1_chr3_173392744_174299372	174255435	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02615.hp1 HG02602.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0019 a0001c0001t0005 a0001c0001t0019	a0001c0001t0005g0033 a0001c0001t0019g0003 a0001c0001t0005g0033 a0001c0001t0019g0003	2	44	0.0455	20	c.707 others(39): Show c.707-19878_707-19859dupAAAAAAAAAAAAAAAAAAAA	NLGN1	ENSG00000169760.18	transcript	ENST00000695368.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
NLGN4X_chrX_5885042_6233867	5921391	C C	CAGAGAGA others(13): Show CAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0005 a0001c0001t0004g0005	1	128	0.0078	20	c.626 others(39): Show c.626-12172_626-12153dupCTCTCTCTCTCTCTCTCTCT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	3/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6030394	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	128	0.0078	20	c.473 others(35): Show c.473-982_473-963dupCACACACACACACACACACA	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6042730	T T	TATATATA others(13): Show TATATATACATACACACACAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0037 a0001c0001t0004g0037	1	128	0.0078	20	c.473 others(39): Show c.473-13299_473-13298insGTGTGTGTGTATGTATATAT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6042730	T T	TATATATA others(13): Show TATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	128	0.0078	20	c.473 others(39): Show c.473-13299_473-13298insGTGTGTGTATATATATATAT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6042730	T T	TATATATA others(13): Show TATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0080 a0001c0001t0005g0080	1	128	0.0078	20	c.473 others(39): Show c.473-13299_473-13298insGTGTGTATATATATATATAT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6044106	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00597.hp2 others(33): Show HG00140.hp1 HG00408.hp1 HG00597.hp2 HG00673.hp1 HG01517.hp2 HG02074.hp1 HG02132.hp1 HG02258.hp1 HG02572.hp1 HG02897.hp2 HG03139.hp1 HG03688.hp1 HG04204.hp1 NA18612.hp1 NA18945.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18966.hp1 NA18969.hp2 NA18971.hp1 NA18977.hp1 NA18980.hp1 NA18984.hp1 NA18988.hp1 NA18990.hp1 NA19004.hp1 NA19011.hp2 NA19056.hp1 NA19063.hp1 NA19065.hp1 NA19079.hp1 NA19082.hp1 NA19085.hp1 NA19089.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0003t0008 a0001c0004t0001 a0001c0008t0001	a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0023 others(33): Show a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0048 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0083 a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0049 a0001c0001t0004g0037 a0001c0001t0005g0044 a0001c0001t0005g0058 a0001c0001t0007g0091 a0001c0003t0008g0052 a0001c0004t0001g0101 a0001c0008t0001g0032	36	128	0.2813	20	c.473 others(39): Show c.473-14694_473-14675dupATTTATTTATTTATTTATTT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6050776	C C	CATCTATC others(13): Show CATCTATCTATCTATCTATCT	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0067 a0001c0002t0003g0067	1	128	0.0078	20	c.473 others(39): Show c.473-21364_473-21345dupAGATAGATAGATAGATAGAT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	2/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6179099	A A	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA19086.hp1 NA18950.hp1 NA19086.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0002c0007t0001 a0001c0001t0001 a0002c0007t0001	a0001c0001t0001g0071 a0002c0007t0001g0124 a0001c0001t0001g0071 a0002c0007t0001g0124	2	128	0.0156	20	c.-30 others(41): Show c.-305-27348_-305-27329dupCCTTCCTTCCTTCCTTCCTT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	1/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6193493	A A	AAAAAAAA others(13): Show AAAAAAAAAAAAGAAAAAAGG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	128	0.0078	20	c.-30 others(41): Show c.-306+35047_-306+35048insCCTTTTTTCTTTTTTTTTTT	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	1/5			chrX	TogoVar
NLGN4X_chrX_5885042_6233867	6221391	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	128	0.0078	20	c.-30 others(39): Show c.-306+7130_-306+7149dupTATATATATATATATATATA	NLGN4X	ENSG00000146938.16	transcript	ENST00000381095.8	protein_coding	1/5			chrX	TogoVar
NLRC3_chr16_3534033_3582403	3551094	T T	TGTCCATC others(13): Show TGTCCATCCACTCATCCACCC	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0045 a0001c0045	a0001c0045t0046 a0001c0045t0046	a0001c0045t0046g0387 a0001c0045t0046g0387	1	396	0.0025	20	c.235 others(37): Show c.2352-617_2352-598dupGGGTGGATGAGTGGATGGAC	NLRC3	ENSG00000167984.18	transcript	ENST00000359128.10	protein_coding	10/19			chr16	TogoVar
NLRC4_chr2_32219453_32269886	32259262	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00423.hp1 others(49): Show HG00099.hp2 HG00140.hp1 HG00423.hp1 HG00621.hp2 HG00673.hp1 HG00735.hp2 HG01081.hp2 HG01123.hp2 HG01255.hp1 HG01258.hp2 HG01496.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02129.hp2 HG02257.hp1 HG02273.hp2 HG02559.hp1 HG02572.hp1 HG02647.hp2 HG02738.hp1 HG02886.hp2 HG02895.hp2 HG03239.hp2 HG03471.hp2 HG03492.hp2 HG04199.hp2 NA18942.hp2 NA18951.hp2 NA18952.hp2 NA18955.hp1 NA18956.hp1 NA18959.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp2 NA18985.hp2 NA18995.hp1 NA18998.hp1 NA18999.hp2 NA19004.hp2 NA19012.hp2 NA19030.hp2 NA19068.hp2 NA19077.hp2 NA19083.hp1 NA19085.hp2 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0007 a0001c0001 a0001c0004 a0003c0007	a0001c0001t0001 a0001c0004t0001 a0003c0007t0001 a0001c0001t0001 a0001c0004t0001 a0003c0007t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0167 others(47): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0167 a0001c0001t0001g0191 a0001c0001t0001g0198 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0267 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0274 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0316 a0001c0001t0001g0335 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0004t0001g0331 a0001c0004t0001g0332 a0003c0007t0001g0289	52	394	0.1320	20	c.-11 others(39): Show c.-118-2389_-118-2370dupAAAAAAAAAAAAAAAAAAAA	NLRC4	ENSG00000091106.19	transcript	ENST00000402280.6	protein_coding	1/8			chr2	TogoVar

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