Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDH11X_chrX_91774375_92628230	92208536	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG06807.hp2 HG03453.hp1 HG06807.hp2	a0001 a0001	a0001c0003 a0001c0009 a0001c0003 a0001c0009	a0001c0003t0012 a0001c0009t0031 a0001c0003t0012 a0001c0009t0031	a0001c0003t0012g0144 a0001c0009t0031g0044 a0001c0003t0012g0144 a0001c0009t0031g0044	2	154	0.0130	20	c.311 others(39): Show c.3114+7082_3114+7083insTATATATATATATATATACA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	7/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92221278	A A	AATACACA others(13): Show AATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01106.hp1 HG01496.hp1 others(2): Show HG01081.hp2 HG01106.hp1 HG01496.hp1 HG02602.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0019 a0001c0001t0001g0064 a0001c0001t0002g0002 others(2): Show a0001c0001t0001g0019 a0001c0001t0001g0064 a0001c0001t0002g0002 a0001c0001t0003g0081 a0001c0001t0004g0082	5	154	0.0325	20	c.311 others(41): Show c.3114+19824_3114+19825insTACACACACACACACACACA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	7/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92252374	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01109.hp1 HG03195.hp1 HG01081.hp1 HG01109.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0020 a0001c0002t0002 a0001c0001t0008 a0001c0001t0020 a0001c0002t0002	a0001c0001t0008g0058 a0001c0001t0020g0149 a0001c0002t0002g0011 a0001c0001t0008g0058 a0001c0001t0020g0149 a0001c0002t0002g0011	3	154	0.0195	20	c.311 others(41): Show c.3115-10735_3115-10716dupACACACACACACACACACAC	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	7/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATAGA others(13): Show TATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0146 a0001c0001t0004g0146	1	154	0.0065	20	c.314 others(41): Show c.3145-61095_3145-61094insTATAGAGAGAGAGAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(13): Show TATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG03710.hp1 NA18977.hp1 HG02027.hp1 HG03710.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0030 a0001c0001t0001 a0001c0001t0030	a0001c0001t0001g0034 a0001c0001t0001g0131 a0001c0001t0030g0070 a0001c0001t0001g0034 a0001c0001t0001g0131 a0001c0001t0030g0070	3	154	0.0195	20	c.314 others(41): Show c.3145-61095_3145-61094insTATATATAGAGAGAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(13): Show TATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG03492.hp1 HG04199.hp1 others(3): Show HG00621.hp1 HG03492.hp1 HG04199.hp1 HG06807.hp1 NA18982.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0018 a0001c0002t0001	a0001c0001t0001g0073 a0001c0001t0001g0104 a0001c0001t0002g0110 others(3): Show a0001c0001t0001g0073 a0001c0001t0001g0104 a0001c0001t0002g0110 a0001c0001t0003g0123 a0001c0001t0018g0087 a0001c0002t0001g0005	6	154	0.0390	20	c.314 others(41): Show c.3145-61095_3145-61094insTATATATATAGAGAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(13): Show TATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG03195.hp1 NA18944.hp1 others(3): Show HG02074.hp1 HG03195.hp1 NA18944.hp1 NA18949.hp1 NA18960.hp1 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0017 a0003c0005t0001	a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0003g0101 others(3): Show a0001c0001t0001g0055 a0001c0001t0002g0002 a0001c0001t0003g0101 a0001c0001t0008g0058 a0001c0001t0017g0033 a0003c0005t0001g0025	6	154	0.0390	20	c.314 others(41): Show c.3145-61095_3145-61094insTATATATATATAGAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(13): Show TATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02083.hp1 HG03239.hp2 others(3): Show HG02071.hp1 HG02083.hp1 HG03239.hp2 HG03471.hp1 NA18959.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0016 a0001c0008t0002	a0001c0001t0001g0098 a0001c0001t0003g0119 a0001c0001t0003g0132 others(3): Show a0001c0001t0001g0098 a0001c0001t0003g0119 a0001c0001t0003g0132 a0001c0001t0006g0046 a0001c0001t0016g0118 a0001c0008t0002g0038	6	154	0.0390	20	c.314 others(41): Show c.3145-61095_3145-61094insTATATATATATATAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(13): Show TATATATATATATATATAGAG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01496.hp1 HG02132.hp1 others(2): Show HG01167.hp1 HG01496.hp1 HG02132.hp1 HG03579.hp1 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008	a0001c0001t0001g0068 a0001c0001t0001g0108 a0001c0001t0002g0103 others(2): Show a0001c0001t0001g0068 a0001c0001t0001g0108 a0001c0001t0002g0103 a0001c0001t0003g0081 a0001c0001t0008g0148	5	154	0.0325	20	c.314 others(41): Show c.3145-61095_3145-61094insTATATATATATATATAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92332386	G G	GTGTGTGC others(13): Show GTGTGTGCATGCATGCACACA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02615.hp1 HG02809.hp1 others(3): Show HG02486.hp1 HG02615.hp1 HG02809.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0006 a0001c0002t0002 others(2): Show a0001c0001t0002 a0001c0001t0006 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006	a0001c0001t0002g0001 a0001c0001t0002g0049 a0001c0001t0006g0022 others(3): Show a0001c0001t0002g0001 a0001c0001t0002g0049 a0001c0001t0006g0022 a0001c0002t0002g0008 a0001c0002t0005g0009 a0001c0002t0006g0007	6	154	0.0390	20	c.314 others(41): Show c.3145-55339_3145-55320dupGCATGCACACATGTGTGCAT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92375142	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0024 a0001c0001t0029g0024	1	154	0.0065	20	c.314 others(41): Show c.3145-12587_3145-12568dupATATATATATATATATATAT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92375166	A A	ATATATAT others(13): Show ATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0141 a0001c0001t0002g0141	1	154	0.0065	20	c.314 others(41): Show c.3145-12568_3145-12567insATATATATATATATATATTT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92375166	A A	ATATATAT others(13): Show ATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0075 a0001c0001t0005g0075	1	154	0.0065	20	c.314 others(41): Show c.3145-12568_3145-12567insATATATATATATATTTTTTT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92375166	A A	ATATATAT others(13): Show ATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0115 a0001c0001t0001g0115	1	154	0.0065	20	c.314 others(41): Show c.3145-12568_3145-12567insATATATATATTTTTTTTTTT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92399192	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02818.hp1 HG02630.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0021 a0001c0001t0005g0050 a0001c0001t0005g0021 a0001c0001t0005g0050	2	154	0.0130	20	c.334 others(41): Show c.3343+11275_3343+11276insAAAAAAAAAAAAAAAAAAAA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92452463	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0043 a0001c0001t0010g0043	1	154	0.0065	20	c.334 others(41): Show c.3344-15835_3344-15834insGTGTGTATATATATATATAT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11Y_chrY_4995296_5747224	5160038	T T	TATATAAT others(13): Show TATATAATATAATATAATATA	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA18944.hp1 NA18948.hp1 others(5): Show HG02129.hp1 NA18944.hp1 NA18948.hp1 NA18967.hp1 NA18983.hp1 NA18988.hp1 NA19068.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0069 others(5): Show a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0079	8	115	0.0696	20	c.285 others(41): Show c.2853+59357_2853+59376dupATATAATATAATATAATATA	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373124	C C	CTTCTTTC others(13): Show CTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0056 a0001c0001t0005g0056	1	115	0.0087	20	c.285 others(43): Show c.2854-127932_2854-127931insTCTTTCTTTCTTTCTTTCTT	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCCT others(13): Show CCCTCCCTCCCTCCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	115	0.0087	20	c.285 others(43): Show c.2854-127930_2854-127929insCTCCCTCCCTCCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCCT others(13): Show CCCTCCCTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18995.hp1 NA18988.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0068 a0001c0001t0001g0069	2	115	0.0174	20	c.285 others(43): Show c.2854-127930_2854-127929insCTCCCTTCTTTCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCTT others(13): Show CCCTCCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18966.hp1 NA19000.hp1 others(3): Show NA18943.hp1 NA18966.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0014 others(3): Show a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0067 a0001c0001t0001g0080	6	115	0.0522	20	c.285 others(43): Show c.2854-127930_2854-127929insCTCCTTTCTTTCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTTCTT others(13): Show CCCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03579.hp1 HG04228.hp1 others(1): Show HG02647.hp1 HG03579.hp1 HG04228.hp1 NA19009.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0005 a0002c0002t0002 a0001c0001t0001 a0001c0001t0005 a0002c0002t0002	a0001c0001t0001g0096 a0001c0001t0001g0110 a0001c0001t0005g0055 others(1): Show a0001c0001t0001g0096 a0001c0001t0001g0110 a0001c0001t0005g0055 a0002c0002t0002g0031	4	115	0.0348	20	c.285 others(43): Show c.2854-127930_2854-127929insCTTCTTTCTTTCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5486686	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0047 a0002c0002t0001g0047	1	115	0.0087	20	c.285 others(41): Show c.2854-14354_2854-14353insCACATATATATATATATATA	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH15_chr10_53797771_54806231	53855904	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG03139.hp2 HG01192.hp2 HG03139.hp2	a0033 a0037 a0033 a0037	a0033c0023 a0037c0018 a0033c0023 a0037c0018	a0033c0023t0026 a0037c0018t0001 a0033c0023t0026 a0037c0018t0001	a0033c0023t0026g0082 a0037c0018t0001g0004 a0033c0023t0026g0082 a0037c0018t0001g0004	2	102	0.0196	20	c.380 others(39): Show c.3806+1270_3806+1271insTATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	28/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	53855920	A A	ATATATAT others(13): Show ATATATATATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG03710.hp2 NA19088.hp2 HG03710.hp2 NA19088.hp2	a0004 a0023 a0004 a0023	a0004c0004 a0023c0041 a0004c0004 a0023c0041	a0004c0004t0006 a0023c0041t0006 a0004c0004t0006 a0023c0041t0006	a0004c0004t0006g0026 a0023c0041t0006g0052 a0004c0004t0006g0026 a0023c0041t0006g0052	2	102	0.0196	20	c.380 others(39): Show c.3806+1254_3806+1255insCACACACATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	28/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	53888299	T T	TATGTATA others(13): Show TATGTATATGTATATATATAC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0002 a0002	a0002c0021 a0002c0021	a0002c0021t0021 a0002c0021t0021	a0002c0021t0021g0047 a0002c0021t0021g0047	1	102	0.0098	20	c.350 others(41): Show c.3501+14943_3501+14944insGTATATATATACATATACAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	26/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	53888300	A A	ATGTATAT others(13): Show ATGTATATGTATATATATACG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00741.hp2 HG01175.hp1 others(11): Show HG00735.hp2 HG00741.hp2 HG01175.hp1 HG01884.hp2 HG02258.hp1 HG02896.hp2 HG03486.hp2 HG03492.hp1 HG03942.hp1 HG04184.hp2 HG06807.hp1 NA18945.hp1 NA19088.hp1 NA20905.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0020 a0032 a0036	a0001c0001 a0002c0002 a0003c0003 others(6): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0020c0027 a0032c0024 a0036c0019	a0001c0001t0003 a0002c0002t0007 a0002c0002t0024 others(8): Show a0001c0001t0003 a0002c0002t0007 a0002c0002t0024 a0003c0003t0003 a0003c0003t0006 a0004c0004t0025 a0005c0005t0005 a0006c0006t0005 a0020c0027t0001 a0032c0024t0001 a0036c0019t0015	a0001c0001t0003g0010 a0001c0001t0003g0015 a0002c0002t0007g0038 others(11): Show a0001c0001t0003g0010 a0001c0001t0003g0015 a0002c0002t0007g0038 a0002c0002t0024g0069 a0003c0003t0003g0033 a0003c0003t0003g0056 a0003c0003t0003g0092 a0003c0003t0006g0051 a0004c0004t0025g0032 a0005c0005t0005g0036 a0006c0006t0005g0055 a0020c0027t0001g0080 a0032c0024t0001g0053 a0036c0019t0015g0001	14	102	0.1373	20	c.350 others(41): Show c.3501+14942_3501+14943insCGTATATATATACATATACA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	26/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	53888308	A A	ATATATAT others(13): Show ATATATATATATATATGTACG	intron_variant intron_variant	MODIFIER	HG01243.hp2 NA19043.hp2 NA20129.hp1 HG01243.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0002c0002 a0012c0016 a0001c0001 a0002c0002 a0012c0016	a0001c0001t0001 a0002c0002t0023 a0012c0016t0001 a0001c0001t0001 a0002c0002t0023 a0012c0016t0001	a0001c0001t0001g0090 a0002c0002t0023g0034 a0012c0016t0001g0028 a0001c0001t0001g0090 a0002c0002t0023g0034 a0012c0016t0001g0028	3	102	0.0294	20	c.350 others(41): Show c.3501+14934_3501+14935insCGTACATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	26/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54113639	G G	GACACACA others(13): Show GACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03492.hp1 NA19240.hp2 HG03492.hp1 NA19240.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0004 a0003c0003t0003 a0003c0003t0004	a0003c0003t0003g0033 a0003c0003t0004g0005 a0003c0003t0003g0033 a0003c0003t0004g0005	2	102	0.0196	20	c.191 others(41): Show c.1917+19216_1917+19235dupGTGTGTGTGTGTGTGTGTGT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	15/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54122002	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0027 a0027	a0027c0031 a0027c0031	a0027c0031t0010 a0027c0031t0010	a0027c0031t0010g0066 a0027c0031t0010g0066	1	102	0.0098	20	c.191 others(41): Show c.1917+10853_1917+10872dupGTGTGTGTGTGTGTGTGTGT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	15/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54194650	C C	CTCTATCT others(13): Show CTCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0009 a0009	a0009c0008 a0009c0008	a0009c0008t0001 a0009c0008t0001	a0009c0008t0001g0048 a0009c0008t0001g0048	1	102	0.0098	20	c.130 others(39): Show c.1305+1013_1305+1032dupTAGATAGATAGATAGATAGA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	11/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54347846	A A	ATTATTTA others(13): Show ATTATTTATTTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01192.hp2 HG02965.hp2 others(2): Show HG00735.hp1 HG01192.hp2 HG02965.hp2 HG03486.hp1 NA19240.hp1	a0003 a0016 a0033 others(1): Show a0003 a0016 a0033 a0035	a0003c0003 a0016c0012 a0033c0023 others(1): Show a0003c0003 a0016c0012 a0033c0023 a0035c0025	a0003c0003t0001 a0003c0003t0004 a0016c0012t0001 others(2): Show a0003c0003t0001 a0003c0003t0004 a0016c0012t0001 a0033c0023t0026 a0035c0025t0007	a0003c0003t0001g0017 a0003c0003t0004g0088 a0016c0012t0001g0008 others(2): Show a0003c0003t0001g0017 a0003c0003t0004g0088 a0016c0012t0001g0008 a0033c0023t0026g0082 a0035c0025t0007g0079	5	102	0.0490	20	c.475 others(37): Show c.475-1363_475-1362insATAAATAAATAAATAAATAA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	5/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54380643	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03098.hp2 HG02615.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0006 a0001c0001t0008g0003 a0001c0001t0001g0006 a0001c0001t0008g0003	2	102	0.0196	20	c.158 others(37): Show c.158-1721_158-1702dupTATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	3/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54450130	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0031 a0001c0001t0004g0031	1	102	0.0098	20	c.158 others(39): Show c.158-71208_158-71189dupATATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	3/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54655256	A A	AAGAGAGA others(13): Show AAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA20129.hp1 NA18906.hp1 NA20129.hp1	a0002 a0012 a0002 a0012	a0002c0002 a0012c0016 a0002c0002 a0012c0016	a0002c0002t0004 a0012c0016t0001 a0002c0002t0004 a0012c0016t0001	a0002c0002t0004g0041 a0012c0016t0001g0028 a0002c0002t0004g0041 a0012c0016t0001g0028	2	102	0.0196	20	c.91+ others(35): Show c.91+8896_91+8915dupCTCTCTCTCTCTCTCTCTCT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	2/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54697625	A A	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01192.hp2 HG01243.hp1 others(15): Show HG00735.hp1 HG01192.hp2 HG01243.hp1 HG02109.hp1 HG02615.hp2 HG02922.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp1 HG03669.hp1 HG03942.hp2 HG06807.hp2 NA19043.hp2 NA19088.hp1 NA20905.hp2	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0006 a0007 a0013 a0017 a0018 a0021 a0030 a0031 a0033 a0034 a0035	a0001c0001 a0002c0002 a0003c0003 others(11): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0007c0007 a0013c0015 a0017c0011 a0018c0037 a0021c0026 a0030c0036 a0031c0020 a0033c0023 a0034c0022 a0035c0025	a0001c0001t0001 a0001c0001t0008 a0002c0002t0004 others(15): Show a0001c0001t0001 a0001c0001t0008 a0002c0002t0004 a0002c0002t0023 a0003c0003t0002 a0003c0003t0004 a0003c0003t0006 a0006c0006t0005 a0007c0007t0003 a0013c0015t0001 a0017c0011t0012 a0018c0037t0013 a0021c0026t0008 a0030c0036t0004 a0031c0020t0007 a0033c0023t0026 a0034c0022t0001 a0035c0025t0007	a0001c0001t0001g0089 a0001c0001t0008g0003 a0002c0002t0004g0077 others(15): Show a0001c0001t0001g0089 a0001c0001t0008g0003 a0002c0002t0004g0077 a0002c0002t0023g0034 a0003c0003t0002g0020 a0003c0003t0004g0088 a0003c0003t0006g0051 a0006c0006t0005g0055 a0007c0007t0003g0065 a0013c0015t0001g0029 a0017c0011t0012g0086 a0018c0037t0013g0062 a0021c0026t0008g0081 a0030c0036t0004g0061 a0031c0020t0007g0083 a0033c0023t0026g0082 a0034c0022t0001g0054 a0035c0025t0007g0079	18	102	0.1765	20	c.-28 others(39): Show c.-28-33355_-28-33336dupCCTTCCTTCCTTCCTTCCTT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54697685	A A	AAGGGAGG others(13): Show AAGGGAGGAAGGGAGGAAGGG	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02258.hp2 HG02965.hp2 HG02145.hp1 HG02258.hp2 HG02965.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0004 a0003c0003t0001 a0003c0003t0009 a0001c0001t0004 a0003c0003t0001 a0003c0003t0009	a0001c0001t0004g0031 a0003c0003t0001g0017 a0003c0003t0009g0018 a0001c0001t0004g0031 a0003c0003t0001g0017 a0003c0003t0009g0018	3	102	0.0294	20	c.-28 others(39): Show c.-28-33415_-28-33396dupCCCTTCCTCCCTTCCTCCCT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731541	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0057 a0004c0004t0005g0057	1	102	0.0098	20	c.-28 others(39): Show c.-28-67252_-28-67251insATATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731545	G G	GATATATA others(13): Show GATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03209.hp2 NA20129.hp1 HG02922.hp2 HG03209.hp2 NA20129.hp1	a0012 a0013 a0017 a0012 a0013 a0017	a0012c0016 a0013c0015 a0017c0011 a0012c0016 a0013c0015 a0017c0011	a0012c0016t0001 a0013c0015t0001 a0017c0011t0012 a0012c0016t0001 a0013c0015t0001 a0017c0011t0012	a0012c0016t0001g0028 a0013c0015t0001g0029 a0017c0011t0012g0086 a0012c0016t0001g0028 a0013c0015t0001g0029 a0017c0011t0012g0086	3	102	0.0294	20	c.-28 others(39): Show c.-28-67256_-28-67255insATATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731563	T T	TATATATA others(13): Show TATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0030 a0030	a0030c0036 a0030c0036	a0030c0036t0004 a0030c0036t0004	a0030c0036t0004g0061 a0030c0036t0004g0061	1	102	0.0098	20	c.-28 others(39): Show c.-28-67274_-28-67273insGTGTGTATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731563	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02145.hp1 HG02896.hp2 others(2): Show HG01192.hp1 HG02145.hp1 HG02896.hp2 HG02965.hp2 HG03669.hp1	a0003 a0008 a0020 others(1): Show a0003 a0008 a0020 a0034	a0003c0003 a0008c0010 a0020c0027 others(1): Show a0003c0003 a0008c0010 a0020c0027 a0034c0022	a0003c0003t0001 a0003c0003t0009 a0008c0010t0001 others(2): Show a0003c0003t0001 a0003c0003t0009 a0008c0010t0001 a0020c0027t0001 a0034c0022t0001	a0003c0003t0001g0017 a0003c0003t0009g0018 a0008c0010t0001g0091 others(2): Show a0003c0003t0001g0017 a0003c0003t0009g0018 a0008c0010t0001g0091 a0020c0027t0001g0080 a0034c0022t0001g0054	5	102	0.0490	20	c.-28 others(39): Show c.-28-67274_-28-67273insGTATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731563	T T	TATATATA others(13): Show TATATATATATATATATATGC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00741.hp1 HG03942.hp1 others(1): Show HG00738.hp1 HG00741.hp1 HG03942.hp1 NA19088.hp1	a0001 a0003 a0019 a0001 a0003 a0019	a0001c0001 a0003c0003 a0019c0038 a0001c0001 a0003c0003 a0019c0038	a0001c0001t0001 a0001c0001t0003 a0003c0003t0006 others(1): Show a0001c0001t0001 a0001c0001t0003 a0003c0003t0006 a0019c0038t0001	a0001c0001t0001g0039 a0001c0001t0003g0010 a0003c0003t0006g0051 others(1): Show a0001c0001t0001g0039 a0001c0001t0003g0010 a0003c0003t0006g0051 a0019c0038t0001g0040	4	102	0.0392	20	c.-28 others(39): Show c.-28-67274_-28-67273insGCATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731564	A A	ATATATAT others(13): Show ATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	102	0.0098	20	c.-28 others(39): Show c.-28-67275_-28-67274insCATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54796282	G G	GTATCTAT others(13): Show GTATCTATGTATCTATCTATC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0009 a0003c0003t0001g0009	1	102	0.0098	20	c.-29 others(37): Show c.-29+4642_-29+4643insGATAGATAGATACATAGATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54804927	T T	TTATATAT others(13): Show TTATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 HG03486.hp2 HG03130.hp1 HG03486.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0004 a0004c0004t0025 a0002c0002t0004 a0004c0004t0025	a0002c0002t0004g0097 a0004c0004t0025g0032 a0002c0002t0004g0097 a0004c0004t0025g0032	2	102	0.0196	20	c.-40 others(31): Show c.-4051_-4032dupTATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding		3697		chr10	TogoVar
PCDH15_chr10_53816099_54806231	53855904	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG03139.hp2 HG01192.hp2 HG03139.hp2	a0002 a0033 a0002 a0033	a0002c0006 a0033c0022 a0002c0006 a0033c0022	a0002c0006t0005 a0033c0022t0001 a0002c0006t0005 a0033c0022t0001	a0002c0006t0005g0074 a0033c0022t0001g0004 a0002c0006t0005g0074 a0033c0022t0001g0004	2	94	0.0213	20	c.380 others(39): Show c.3806+1270_3806+1271insTATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	28/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53855920	A A	ATATATAT others(13): Show ATATATATATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG03710.hp1 NA19088.hp2 HG03710.hp1 NA19088.hp2	a0004 a0019 a0004 a0019	a0004c0004 a0019c0047 a0004c0004 a0019c0047	a0004c0004t0001 a0019c0047t0001 a0004c0004t0001 a0019c0047t0001	a0004c0004t0001g0023 a0019c0047t0001g0050 a0004c0004t0001g0023 a0019c0047t0001g0050	2	94	0.0213	20	c.380 others(39): Show c.3806+1254_3806+1255insCACACACATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	28/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53888299	T T	TATGTATA others(13): Show TATGTATATGTATATATATAC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0030 a0030	a0030c0028 a0030c0028	a0030c0028t0001 a0030c0028t0001	a0030c0028t0001g0044 a0030c0028t0001g0044	1	94	0.0106	20	c.350 others(41): Show c.3501+14943_3501+14944insGTATATATATACATATACAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53888300	A A	ATGTATAT others(13): Show ATGTATATGTATATATATACG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00741.hp2 HG01175.hp2 others(10): Show HG00735.hp2 HG00741.hp2 HG01175.hp2 HG01884.hp2 HG02258.hp1 HG03486.hp2 HG03492.hp1 HG03942.hp1 HG04184.hp1 HG06807.hp2 NA18945.hp1 NA19088.hp1 NA20905.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0028 a0029 a0032	a0001c0001 a0002c0002 a0003c0003 others(7): Show a0001c0001 a0002c0002 a0003c0003 a0003c0024 a0004c0004 a0005c0009 a0006c0008 a0028c0031 a0029c0030 a0032c0023	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(7): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0003c0024t0001 a0004c0004t0005 a0005c0009t0001 a0006c0008t0001 a0028c0031t0001 a0029c0030t0001 a0032c0023t0006	a0001c0001t0001g0010 a0001c0001t0001g0015 a0002c0002t0001g0063 others(10): Show a0001c0001t0001g0010 a0001c0001t0001g0015 a0002c0002t0001g0063 a0003c0003t0001g0030 a0003c0003t0001g0054 a0003c0003t0001g0084 a0003c0024t0001g0049 a0004c0004t0005g0029 a0005c0009t0001g0033 a0006c0008t0001g0053 a0028c0031t0001g0051 a0029c0030t0001g0035 a0032c0023t0006g0001	13	94	0.1383	20	c.350 others(41): Show c.3501+14942_3501+14943insCGTATATATATACATATACA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53888308	A A	ATATATAT others(13): Show ATATATATATATATATGTACG	intron_variant intron_variant	MODIFIER	HG01243.hp1 NA19043.hp1 NA20129.hp1 HG01243.hp1 NA19043.hp1 NA20129.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0002c0002 a0012c0020 a0001c0001 a0002c0002 a0012c0020	a0001c0001t0001 a0002c0002t0009 a0012c0020t0001 a0001c0001t0001 a0002c0002t0009 a0012c0020t0001	a0001c0001t0001g0082 a0002c0002t0009g0031 a0012c0020t0001g0025 a0001c0001t0001g0082 a0002c0002t0009g0031 a0012c0020t0001g0025	3	94	0.0319	20	c.350 others(41): Show c.3501+14934_3501+14935insCGTACATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar

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