Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

Show

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
PCDHA11_chr5_140863957_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0167 a0001c0002t0001g0167	1	260	0.0039	20	c.239 others(41): Show c.2392-32336_2392-32317dupTATATATATATATATATATA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0214 a0001c0002t0001g0214	1	260	0.0039	20	c.239 others(41): Show c.2392-32317_2392-32316insTATATATATATATATACACA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0109 a0001c0001t0005g0109	1	260	0.0039	20	c.239 others(41): Show c.2392-32317_2392-32316insTATATATATATATATATACA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18522.hp1 HG02155.hp2 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0135 a0001c0002t0001g0252 a0001c0002t0001g0135 a0001c0002t0001g0252	2	260	0.0077	20	c.236 others(41): Show c.2368-37740_2368-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02148.hp2 NA18941.hp2 others(3): Show HG02145.hp2 HG02148.hp2 NA18941.hp2 NA19060.hp1 NA19065.hp2 NA19077.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 others(1): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0002c0003t0001	a0001c0002t0001g0179 a0001c0002t0001g0202 a0001c0002t0001g0213 others(3): Show a0001c0002t0001g0179 a0001c0002t0001g0202 a0001c0002t0001g0213 a0001c0002t0002g0198 a0001c0002t0004g0218 a0002c0003t0001g0156	6	260	0.0231	20	c.236 others(41): Show c.2368-37736_2368-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG01517.hp2 others(4): Show HG00280.hp2 HG00323.hp2 HG01517.hp2 HG02109.hp2 HG02293.hp2 NA18977.hp2 NA18991.hp1	a0001 a0011 a0001 a0011	a0001c0002 a0011c0018 a0001c0002 a0011c0018	a0001c0002t0001 a0011c0018t0001 a0001c0002t0001 a0011c0018t0001	a0001c0002t0001g0137 a0001c0002t0001g0166 a0001c0002t0001g0173 others(4): Show a0001c0002t0001g0137 a0001c0002t0001g0166 a0001c0002t0001g0173 a0001c0002t0001g0214 a0001c0002t0001g0257 a0001c0002t0001g0258 a0011c0018t0001g0221	7	260	0.0269	20	c.236 others(41): Show c.2368-37712_2368-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0148 a0001c0002t0001g0148	1	260	0.0039	20	c.236 others(41): Show c.2368-32336_2368-32317dupTATATATATATATATATATA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0204 a0001c0002t0001g0204	1	260	0.0039	20	c.236 others(41): Show c.2368-32317_2368-32316insTATATATATATATATACACA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0115 a0001c0001t0005g0115	1	260	0.0039	20	c.236 others(41): Show c.2368-32317_2368-32316insTATATATATATATATATACA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18522.hp1 HG02155.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0140 a0001c0001t0001g0220 a0001c0001t0001g0140 a0001c0001t0001g0220	2	260	0.0077	20	c.239 others(41): Show c.2395-37740_2395-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02148.hp1 NA18941.hp2 others(3): Show HG02145.hp1 HG02148.hp1 NA18941.hp2 NA19060.hp2 NA19065.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0168 a0001c0001t0001g0193 a0001c0001t0001g0217 others(3): Show a0001c0001t0001g0168 a0001c0001t0001g0193 a0001c0001t0001g0217 a0001c0001t0001g0229 a0001c0001t0002g0211 a0001c0001t0004g0234	6	260	0.0231	20	c.239 others(41): Show c.2395-37736_2395-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG01517.hp1 others(4): Show HG00280.hp1 HG00323.hp2 HG01517.hp1 HG02109.hp2 HG02293.hp2 NA18977.hp2 NA18991.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0012 a0001c0001 a0008c0012	a0001c0001t0001 a0008c0012t0001 a0001c0001t0001 a0008c0012t0001	a0001c0001t0001g0145 a0001c0001t0001g0178 a0001c0001t0001g0187 others(4): Show a0001c0001t0001g0145 a0001c0001t0001g0178 a0001c0001t0001g0187 a0001c0001t0001g0230 a0001c0001t0001g0237 a0001c0001t0001g0245 a0008c0012t0001g0246	7	260	0.0269	20	c.239 others(41): Show c.2395-37712_2395-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	260	0.0039	20	c.239 others(41): Show c.2395-32336_2395-32317dupTATATATATATATATATATA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	260	0.0039	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATACACA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0006	a0001c0005t0006g0258 a0001c0005t0006g0258	1	260	0.0039	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATATACA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18522.hp2 HG02155.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0007 a0002c0002t0001g0179 a0001c0001t0001g0007 a0002c0002t0001g0179	2	200	0.0100	20	c.239 others(41): Show c.2395-37740_2395-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19077.hp2 HG02145.hp1 NA19077.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0001 a0002c0002t0001 a0003c0003t0001	a0002c0002t0001g0175 a0003c0003t0001g0187 a0002c0002t0001g0175 a0003c0003t0001g0187	2	200	0.0100	20	c.239 others(41): Show c.2395-37736_2395-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp2 HG01517.hp1 others(3): Show HG00280.hp2 HG00621.hp2 HG01517.hp1 HG02293.hp1 NA18977.hp2 NA18991.hp2	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0002c0002 a0012c0014 a0001c0001 a0002c0002 a0012c0014	a0001c0001t0001 a0002c0002t0001 a0012c0014t0001 a0001c0001t0001 a0002c0002t0001 a0012c0014t0001	a0001c0001t0001g0050 a0002c0002t0001g0123 a0002c0002t0001g0133 others(3): Show a0001c0001t0001g0050 a0002c0002t0001g0123 a0002c0002t0001g0133 a0002c0002t0001g0134 a0002c0002t0001g0158 a0012c0014t0001g0141	6	200	0.0300	20	c.239 others(41): Show c.2395-37712_2395-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	200	0.0050	20	c.239 others(41): Show c.2395-32336_2395-32317dupTATATATATATATATATATA	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0146 a0002c0002t0006g0146	1	200	0.0050	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATATACA	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18522.hp2 HG02155.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0028 a0002c0002t0001g0173 a0001c0001t0001g0028 a0002c0002t0001g0173	2	202	0.0099	20	c.238 others(41): Show c.2389-37740_2389-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA19077.hp2 HG02145.hp2 NA19077.hp2	a0004 a0010 a0004 a0010	a0004c0005 a0010c0017 a0004c0005 a0010c0017	a0004c0005t0001 a0010c0017t0001 a0004c0005t0001 a0010c0017t0001	a0004c0005t0001g0065 a0010c0017t0001g0193 a0004c0005t0001g0065 a0010c0017t0001g0193	2	202	0.0099	20	c.238 others(41): Show c.2389-37736_2389-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG01517.hp1 others(4): Show HG00280.hp2 HG00621.hp1 HG01517.hp1 HG02109.hp2 HG02293.hp1 NA18977.hp2 NA18991.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0049 a0002c0002t0001g0121 a0002c0002t0001g0133 others(4): Show a0001c0001t0001g0049 a0002c0002t0001g0121 a0002c0002t0001g0133 a0002c0002t0001g0145 a0002c0002t0001g0146 a0002c0002t0001g0154 a0002c0002t0001g0172	7	202	0.0347	20	c.238 others(41): Show c.2389-37712_2389-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0086 a0001c0001t0001g0086	1	202	0.0050	20	c.238 others(41): Show c.2389-32336_2389-32317dupTATATATATATATATATATA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0159 a0002c0002t0005g0159	1	202	0.0050	20	c.238 others(41): Show c.2389-32317_2389-32316insTATATATATATATATATACA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0174 a0002c0002t0002g0174	1	208	0.0048	20	c.239 others(41): Show c.2395-37740_2395-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA19077.hp2 HG02145.hp2 NA19077.hp2	a0003 a0005 a0003 a0005	a0003c0004 a0005c0008 a0003c0004 a0005c0008	a0003c0004t0001 a0005c0008t0002 a0003c0004t0001 a0005c0008t0002	a0003c0004t0001g0203 a0005c0008t0002g0141 a0003c0004t0001g0203 a0005c0008t0002g0141	2	208	0.0096	20	c.239 others(41): Show c.2395-37736_2395-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG01517.hp1 others(4): Show HG00280.hp2 HG00621.hp1 HG01517.hp1 HG02109.hp2 HG02293.hp2 NA18977.hp2 NA18991.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0003 a0001c0001 a0002c0002 a0004c0003	a0001c0001t0001 a0002c0002t0002 a0004c0003t0002 a0001c0001t0001 a0002c0002t0002 a0004c0003t0002	a0001c0001t0001g0075 a0002c0002t0002g0114 a0002c0002t0002g0135 others(4): Show a0001c0001t0001g0075 a0002c0002t0002g0114 a0002c0002t0002g0135 a0002c0002t0002g0139 a0002c0002t0002g0148 a0002c0002t0002g0173 a0004c0003t0002g0126	7	208	0.0337	20	c.239 others(41): Show c.2395-37712_2395-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0001 a0001c0013t0001	a0001c0013t0001g0103 a0001c0013t0001g0103	1	208	0.0048	20	c.239 others(41): Show c.2395-32336_2395-32317dupTATATATATATATATATATA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0156 a0002c0002t0009g0156	1	208	0.0048	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATATACA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0183 a0001c0001t0002g0183	1	212	0.0047	20	c.238 others(41): Show c.2386-37740_2386-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19077.hp2 HG02145.hp1 NA19077.hp2	a0001 a0015 a0001 a0015	a0001c0001 a0015c0018 a0001c0001 a0015c0018	a0001c0001t0002 a0015c0018t0001 a0001c0001t0002 a0015c0018t0001	a0001c0001t0002g0144 a0015c0018t0001g0109 a0001c0001t0002g0144 a0015c0018t0001g0109	2	212	0.0094	20	c.238 others(41): Show c.2386-37736_2386-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp2 HG01517.hp1 others(4): Show HG00280.hp2 HG00621.hp2 HG01517.hp1 HG02109.hp2 HG02293.hp2 NA18977.hp1 NA18991.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0117 a0001c0001t0002g0129 a0001c0001t0002g0138 others(4): Show a0001c0001t0002g0117 a0001c0001t0002g0129 a0001c0001t0002g0138 a0001c0001t0002g0142 a0001c0001t0002g0152 a0001c0001t0002g0182 a0002c0002t0001g0078	7	212	0.0330	20	c.238 others(41): Show c.2386-37712_2386-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0079 a0003c0003t0001g0079	1	212	0.0047	20	c.238 others(41): Show c.2386-32336_2386-32317dupTATATATATATATATATATA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0163 a0001c0001t0007g0163	1	212	0.0047	20	c.238 others(41): Show c.2386-32317_2386-32316insTATATATATATATATATACA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0104 a0002c0002t0002g0104	1	220	0.0046	20	c.235 others(41): Show c.2353-37740_2353-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA18941.hp1 NA19077.hp1 HG02145.hp2 NA18941.hp1 NA19077.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0002c0002t0002 a0003c0004t0003 a0001c0001t0001 a0002c0002t0002 a0003c0004t0003	a0001c0001t0001g0153 a0002c0002t0002g0029 a0003c0004t0003g0110 a0001c0001t0001g0153 a0002c0002t0002g0029 a0003c0004t0003g0110	3	220	0.0136	20	c.235 others(41): Show c.2353-37736_2353-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00621.hp1 HG01517.hp1 others(4): Show HG00280.hp1 HG00621.hp1 HG01517.hp1 HG02109.hp1 HG02293.hp2 NA18977.hp1 NA18991.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0192 a0002c0002t0002g0020 a0002c0002t0002g0025 others(4): Show a0001c0001t0001g0192 a0002c0002t0002g0020 a0002c0002t0002g0025 a0002c0002t0002g0040 a0002c0002t0002g0041 a0002c0002t0002g0066 a0002c0002t0002g0101	7	220	0.0318	20	c.235 others(41): Show c.2353-37712_2353-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	220	0.0046	20	c.235 others(41): Show c.2353-32336_2353-32317dupTATATATATATATATATATA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0179	1	220	0.0046	20	c.235 others(41): Show c.2353-32317_2353-32316insTATATATATATATATACACA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0067 a0002c0002t0007g0067	1	220	0.0046	20	c.235 others(41): Show c.2353-32317_2353-32316insTATATATATATATATATACA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18522.hp1 HG02155.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0053 a0001c0002t0001g0192 a0001c0001t0001g0053 a0001c0002t0001g0192	2	236	0.0085	20	c.239 others(41): Show c.2395-37740_2395-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02145.hp2 NA18941.hp1 others(1): Show HG02132.hp2 HG02145.hp2 NA18941.hp1 NA19077.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0002t0001 a0003c0004t0001 a0001c0001t0001 a0001c0002t0001 a0003c0004t0001	a0001c0001t0001g0079 a0001c0002t0001g0160 a0001c0002t0001g0188 others(1): Show a0001c0001t0001g0079 a0001c0002t0001g0160 a0001c0002t0001g0188 a0003c0004t0001g0123	4	236	0.0170	20	c.239 others(41): Show c.2395-37736_2395-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00621.hp1 others(5): Show HG00280.hp2 HG00323.hp2 HG00621.hp1 HG01517.hp2 HG02109.hp1 HG02293.hp2 NA18977.hp1 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0045 a0001c0002t0001g0156 a0001c0002t0001g0167 others(5): Show a0001c0001t0001g0045 a0001c0002t0001g0156 a0001c0002t0001g0167 a0001c0002t0001g0176 a0001c0002t0001g0182 a0001c0002t0001g0187 a0001c0002t0001g0225 a0001c0002t0001g0228	8	236	0.0339	20	c.239 others(41): Show c.2395-37712_2395-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946611	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	236	0.0042	20	c.239 others(41): Show c.2395-32336_2395-32317dupTATATATATATATATATATA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	236	0.0042	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATACACA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946631	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0193 a0001c0002t0005g0193	1	236	0.0042	20	c.239 others(41): Show c.2395-32317_2395-32316insTATATATATATATATATACA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18522.hp1 HG02155.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0199 a0002c0001t0001g0022 a0001c0002t0001g0199 a0002c0001t0001g0022	2	248	0.0081	20	c.235 others(41): Show c.2356-37740_2356-37739insCCTTTCTTTCTTTCTTTCTT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941202	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02148.hp1 NA18941.hp1 others(2): Show HG02145.hp2 HG02148.hp1 NA18941.hp1 NA19065.hp1 NA19077.hp1	a0001 a0002 a0017 a0001 a0002 a0017	a0001c0002 a0001c0004 a0002c0001 others(2): Show a0001c0002 a0001c0004 a0002c0001 a0002c0016 a0017c0027	a0001c0002t0001 a0001c0004t0001 a0002c0001t0001 others(2): Show a0001c0002t0001 a0001c0004t0001 a0002c0001t0001 a0002c0016t0004 a0017c0027t0002	a0001c0002t0001g0193 a0001c0004t0001g0132 a0002c0001t0001g0062 others(2): Show a0001c0002t0001g0193 a0001c0004t0001g0132 a0002c0001t0001g0062 a0002c0016t0004g0033 a0017c0027t0002g0161	5	248	0.0202	20	c.235 others(41): Show c.2356-37736_2356-37735insTCTTTCTTTCTTTCTTTCTT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941214	C C	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00621.hp2 others(5): Show HG00280.hp1 HG00323.hp2 HG00621.hp2 HG01517.hp2 HG02109.hp2 HG02293.hp1 NA18977.hp1 NA18991.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0154 a0001c0002t0001g0157 a0001c0002t0001g0158 others(5): Show a0001c0002t0001g0154 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0167 a0001c0002t0001g0177 a0001c0002t0001g0184 a0001c0002t0001g0192 a0002c0001t0001g0006	8	248	0.0323	20	c.235 others(41): Show c.2356-37712_2356-37693dupTTCTTTCTTTCTTTCTTTCT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3	INFO_REALIGN_3_PRIME	chr5	TogoVar

Search by Variant

Search

Search Results