Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
PTPRD_chr9_8309246_10618002	10182259	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0026 a0001c0006t0026	a0001c0006t0026g0034 a0001c0006t0026g0034	1	34	0.0294	20	c.-54 others(43): Show c.-544-148489_-544-148470dupTTTTTTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10202671	G G	GAGATATA others(13): Show GAGATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0009 a0001c0002t0001g0009	1	34	0.0294	20	c.-54 others(43): Show c.-545+138291_-545+138292insATATATATATATATATATCT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10231989	A A	AGAGAGAG others(13): Show AGAGAGAGAGAGAGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0002 a0001c0017t0002	a0001c0017t0002g0005 a0001c0017t0002g0005	1	34	0.0294	20	c.-54 others(43): Show c.-545+108973_-545+108974insACACACACTCTCTCTCTCTC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10231989	A A	AGAGAGAG others(13): Show AGAGAGAGAGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0017 a0001c0010t0017	a0001c0010t0017g0016 a0001c0010t0017g0016	1	34	0.0294	20	c.-54 others(43): Show c.-545+108973_-545+108974insACACACACACACTCTCTCTC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10479658	T T	TAAATAAA others(13): Show TAAATAAATAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	34	0.0294	20	c.-60 others(43): Show c.-600+132739_-600+132740insGTTTGTTTGTTTATTTATTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10479658	T T	TAAATAAA others(13): Show TAAATAAATAAATAAACAAAC	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp2 HG01981.hp1 HG01981.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0008 a0001c0001 a0003c0008	a0001c0001t0019 a0003c0008t0008 a0001c0001t0019 a0003c0008t0008	a0001c0001t0019g0023 a0003c0008t0008g0003 a0001c0001t0019g0023 a0003c0008t0008g0003	2	34	0.0588	20	c.-60 others(43): Show c.-600+132739_-600+132740insGTTTGTTTATTTATTTATTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10504115	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0012 a0001c0013t0012	a0001c0013t0012g0014 a0001c0013t0012g0014	1	34	0.0294	20	c.-60 others(43): Show c.-600+108263_-600+108282dupTTTTTTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10509557	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02683.hp2 HG03139.hp2 others(1): Show HG00642.hp2 HG02683.hp2 HG03139.hp2 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0015	a0001c0001t0014 a0001c0002t0005 a0001c0006t0026 others(1): Show a0001c0001t0014 a0001c0002t0005 a0001c0006t0026 a0002c0015t0010	a0001c0001t0014g0008 a0001c0002t0005g0025 a0001c0006t0026g0034 others(1): Show a0001c0001t0014g0008 a0001c0002t0005g0025 a0001c0006t0026g0034 a0002c0015t0010g0026	4	34	0.1177	20	c.-60 others(43): Show c.-600+102821_-600+102840dupTATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10509557	T T	TTATATTT others(13): Show TTATATTTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0001 a0001c0004t0003g0001	1	34	0.0294	20	c.-60 others(43): Show c.-600+102840_-600+102841insTATATATATATATAAATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10523601	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0012 a0001c0001t0022g0012	1	34	0.0294	20	c.-60 others(41): Show c.-600+88777_-600+88796dupTATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRD_chr9_8309246_10618002	10525727	A A	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0001 a0001c0004t0003g0001	1	34	0.0294	20	c.-60 others(41): Show c.-600+86651_-600+86670dupACACACACACACACACACAC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45		chr9	TogoVar
PTPRE_chr10_127902103_128090855	127944500	A A	ATGGATGG others(13): Show ATGGATGGATGGATGGATAAG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00423.hp2 others(64): Show HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00558.hp2 HG00673.hp1 HG00741.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp1 HG01981.hp2 HG02027.hp2 HG02055.hp1 HG02074.hp1 HG02129.hp1 HG02129.hp2 HG02155.hp1 HG02257.hp2 HG02486.hp2 HG02572.hp1 HG02615.hp1 HG02698.hp1 HG02717.hp2 HG02738.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp2 HG03130.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04228.hp1 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18946.hp1 NA18954.hp2 NA18965.hp2 NA18970.hp1 NA18979.hp1 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18985.hp2 NA18994.hp1 NA19000.hp1 NA19000.hp2 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19057.hp2 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0011 a0001c0015 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0022 a0001c0001t0024 a0001c0002t0006 a0001c0002t0011 a0001c0002t0012 a0001c0002t0013 a0001c0002t0014 a0001c0002t0025 a0001c0002t0030 a0001c0003t0002 a0001c0003t0004 a0001c0005t0002 a0001c0005t0003 a0001c0011t0003 a0001c0015t0003 a0002c0004t0004	a0001c0001t0001g0161 a0001c0001t0001g0256 a0001c0001t0001g0267 others(64): Show a0001c0001t0001g0161 a0001c0001t0001g0256 a0001c0001t0001g0267 a0001c0001t0002g0127 a0001c0001t0002g0192 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0220 a0001c0001t0003g0075 a0001c0001t0003g0109 a0001c0001t0003g0117 a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0125 a0001c0001t0003g0144 a0001c0001t0003g0146 a0001c0001t0003g0152 a0001c0001t0004g0060 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0080 a0001c0001t0004g0101 a0001c0001t0004g0118 a0001c0001t0004g0128 a0001c0001t0004g0129 a0001c0001t0004g0134 a0001c0001t0004g0145 a0001c0001t0004g0151 a0001c0001t0005g0241 a0001c0001t0005g0243 a0001c0001t0005g0298 a0001c0001t0007g0072 a0001c0001t0007g0121 a0001c0001t0007g0126 a0001c0001t0008g0003 a0001c0001t0009g0238 a0001c0001t0010g0081 a0001c0001t0010g0088 a0001c0001t0010g0095 a0001c0001t0010g0102 a0001c0001t0010g0113 a0001c0001t0011g0239 a0001c0001t0011g0240 a0001c0001t0015g0094 a0001c0001t0022g0235 a0001c0001t0024g0107 a0001c0002t0006g0203 a0001c0002t0011g0236 a0001c0002t0011g0244 a0001c0002t0011g0301 a0001c0002t0012g0076 a0001c0002t0013g0237 a0001c0002t0014g0068 a0001c0002t0014g0130 a0001c0002t0014g0132 a0001c0002t0014g0133 a0001c0002t0025g0131 a0001c0002t0030g0139 a0001c0003t0002g0219 a0001c0003t0002g0261 a0001c0003t0004g0100 a0001c0005t0002g0274 a0001c0005t0003g0141 a0001c0011t0003g0120 a0001c0015t0003g0119 a0002c0004t0004g0124	67	304	0.2204	20	c.-31 others(39): Show c.-31+37206_-31+37207insATAAGTGGATGGATGGATGG	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	1/20	INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRE_chr10_127902103_128090855	128010545	C C	CCTTTTCT others(13): Show CCTTTTCTTTTCTTTTCTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01257.hp2 HG01975.hp1 others(9): Show HG01175.hp1 HG01257.hp2 HG01975.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02572.hp2 HG02647.hp1 HG02922.hp1 HG03516.hp1 HG03540.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0015 a0001c0001t0017 a0001c0001t0046 a0001c0002t0013 a0001c0002t0030 a0001c0003t0005 a0001c0005t0003	a0001c0001t0001g0285 a0001c0001t0001g0299 a0001c0001t0003g0157 others(9): Show a0001c0001t0001g0285 a0001c0001t0001g0299 a0001c0001t0003g0157 a0001c0001t0004g0145 a0001c0001t0005g0298 a0001c0001t0015g0142 a0001c0001t0017g0194 a0001c0001t0046g0281 a0001c0002t0013g0213 a0001c0002t0030g0139 a0001c0003t0005g0279 a0001c0005t0003g0105	12	304	0.0395	20	c.-8+ others(37): Show c.-8+28279_-8+28298dupTCTTTTCTTTTCTTTTCTTT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20	INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRE_chr10_127902103_128090855	128010590	T T	TCTTTTCT others(13): Show TCTTTTCTTTTCTTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0188 a0001c0001t0008g0188	1	304	0.0033	20	c.-8+ others(37): Show c.-8+28298_-8+28299insTCTTTTCTTTTCTTTCCTTT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20	INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRE_chr10_127902103_128090855	128019633	C C	CCATCCAT others(13): Show CCATCCATCCATCCATCCATT	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG02572.hp1 HG04199.hp1 others(1): Show HG01168.hp2 HG02572.hp1 HG04199.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008	a0001c0001t0002g0183 a0001c0001t0002g0260 a0001c0001t0004g0101 others(1): Show a0001c0001t0002g0183 a0001c0001t0002g0260 a0001c0001t0004g0101 a0001c0001t0008g0258	4	304	0.0132	20	c.-7- others(37): Show c.-7-21239_-7-21238insCCATCCATCCATCCATTCAT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20	INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRG_chr3_61556571_62302609	61600186	A A	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0052 a0002c0003t0002g0052	1	94	0.0106	20	c.85+ others(37): Show c.85+37815_85+37816insGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61676456	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02683.hp2 HG02723.hp1 others(2): Show HG02559.hp2 HG02683.hp2 HG02723.hp1 HG03017.hp2 HG03540.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0015 a0002c0003 others(2): Show a0001c0001 a0001c0015 a0002c0003 a0003c0004 a0004c0006	a0001c0001t0002 a0001c0015t0001 a0002c0003t0001 others(2): Show a0001c0001t0002 a0001c0015t0001 a0002c0003t0001 a0003c0004t0003 a0004c0006t0001	a0001c0001t0002g0035 a0001c0015t0001g0011 a0002c0003t0001g0017 others(2): Show a0001c0001t0002g0035 a0001c0015t0001g0011 a0002c0003t0001g0017 a0003c0004t0003g0008 a0004c0006t0001g0027	5	94	0.0532	20	c.86- others(37): Show c.86-72404_86-72403insAAAAAAAAAAAAAAAAAAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61820603	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0001 a0001c0016t0001	a0001c0016t0001g0059 a0001c0016t0001g0059	1	94	0.0106	20	c.190 others(39): Show c.190+71628_190+71647dupTTTTTTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61833067	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0026 a0001c0001t0004g0026	1	94	0.0106	20	c.190 others(39): Show c.190+84095_190+84114dupGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61926581	T T	TTCCCTCC others(13): Show TTCCCTCCCTCCCTCCCTCCC	intron_variant intron_variant	MODIFIER	HG00738.hp1 NA19240.hp1 HG00738.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0006 a0002c0002t0002 a0001c0001t0006 a0002c0002t0002	a0001c0001t0006g0036 a0002c0002t0002g0021 a0001c0001t0006g0036 a0002c0002t0002g0021	2	94	0.0213	20	c.191 others(39): Show c.191-63032_191-63013dupCTCCCTCCCTCCCTCCCTCC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61926609	C C	CTCCCTCC others(13): Show CTCCCTCCCTCCCTCCCTCCT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02896.hp2 HG03130.hp2 others(2): Show HG01071.hp1 HG02896.hp2 HG03130.hp2 HG03471.hp1 HG03669.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0005 a0002c0002 others(2): Show a0001c0001 a0001c0005 a0002c0002 a0002c0003 a0009c0018	a0001c0001t0002 a0001c0005t0009 a0002c0002t0002 others(2): Show a0001c0001t0002 a0001c0005t0009 a0002c0002t0002 a0002c0003t0001 a0009c0018t0006	a0001c0001t0002g0062 a0001c0005t0009g0022 a0002c0002t0002g0078 others(2): Show a0001c0001t0002g0062 a0001c0005t0009g0022 a0002c0002t0002g0078 a0002c0003t0001g0067 a0009c0018t0006g0039	5	94	0.0532	20	c.191 others(39): Show c.191-63013_191-63012insCTCCCTCCCTCCCTCCTTCC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61956090	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0083 a0001c0001t0007g0083	1	94	0.0106	20	c.191 others(39): Show c.191-33518_191-33517insATATATATATATATATATAT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61995682	G G	GCCCGCCT others(13): Show GCCCGCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0048 a0003c0004t0001g0048	1	94	0.0106	20	c.370 others(37): Show c.370+5880_370+5881insCGCCTTCCTTCCTTCCTTCC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	3/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62010370	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0026 a0001c0001t0004g0026	1	94	0.0106	20	c.519 others(37): Show c.519+6881_519+6900dupGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62026879	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01496.hp2 NA19087.hp1 HG01255.hp1 HG01496.hp2 NA19087.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0014 a0001c0001t0001 a0002c0003t0014	a0001c0001t0001g0043 a0001c0001t0001g0055 a0002c0003t0014g0007 a0001c0001t0001g0043 a0001c0001t0001g0055 a0002c0003t0014g0007	3	94	0.0319	20	c.519 others(39): Show c.519+23397_519+23398insAAAAAAAAAAAAAAAAAAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62047246	A A	ATTATTTA others(13): Show ATTATTTATTTATTTATTTAT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0036 a0001c0001t0006g0036	1	94	0.0106	20	c.520 others(39): Show c.520-30910_520-30891dupATTTATTTATTTATTTATTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62047263	T T	TTATTTAT others(13): Show TTATTTATTTATTTATTTATG	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02647.hp1 HG02683.hp1 others(3): Show HG01255.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG03239.hp1 HG03831.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 others(1): Show a0001c0001 a0002c0002 a0003c0004 a0003c0012	a0001c0001t0002 a0002c0002t0002 a0003c0004t0001 others(3): Show a0001c0001t0002 a0002c0002t0002 a0003c0004t0001 a0003c0004t0003 a0003c0004t0013 a0003c0012t0012	a0001c0001t0002g0063 a0002c0002t0002g0092 a0003c0004t0001g0048 others(3): Show a0001c0001t0002g0063 a0002c0002t0002g0092 a0003c0004t0001g0048 a0003c0004t0003g0008 a0003c0004t0013g0054 a0003c0012t0012g0049	6	94	0.0638	20	c.520 others(39): Show c.520-30891_520-30890insATTTATTTATGTATTTATTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62069684	T T	TCTCTCTC others(13): Show TCTCTCTCTCTCTCTCACACA	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0004 a0006c0007t0004	a0006c0007t0004g0031 a0006c0007t0004g0031	1	94	0.0106	20	c.520 others(37): Show c.520-8478_520-8477insTCTCTCTCTCTCTCACACAC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	4/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02683.hp2 HG02809.hp1 others(2): Show HG00099.hp2 HG02683.hp2 HG02809.hp1 HG02809.hp2 HG03017.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0008 a0003c0004 a0001c0001 a0001c0008 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0001c0008t0005 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0008t0005 a0003c0004t0003	a0001c0001t0001g0066 a0001c0001t0001g0077 a0001c0001t0003g0024 others(2): Show a0001c0001t0001g0066 a0001c0001t0001g0077 a0001c0001t0003g0024 a0001c0008t0005g0068 a0003c0004t0003g0008	5	94	0.0532	20	c.265 others(39): Show c.2657-1503_2657-1484dupACACACACACACACACACAC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TATATACA others(13): Show TATATACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02970.hp2 HG03041.hp1 others(2): Show HG00639.hp1 HG02970.hp2 HG03041.hp1 HG03139.hp1 HG03453.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(1): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0003c0004t0002	a0001c0001t0002g0010 a0001c0001t0002g0050 a0001c0001t0006g0037 others(2): Show a0001c0001t0002g0010 a0001c0001t0002g0050 a0001c0001t0006g0037 a0001c0001t0007g0084 a0003c0004t0002g0071	5	94	0.0532	20	c.265 others(39): Show c.2657-1513_2657-1512insTATACACACACACACACACA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62281538	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02698.hp2 HG00639.hp1 HG02698.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0008 a0001c0001t0002 a0002c0003t0008	a0001c0001t0002g0050 a0002c0003t0008g0019 a0001c0001t0002g0050 a0002c0003t0008g0019	2	94	0.0213	20	c.376 others(35): Show c.3766-12_3766-11insTTTTTTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	26/29	INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRH_chr19_55176247_55214501	55184805	T T	TAATAAAA others(13): Show TAATAAAATAAAATAAAATAA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0001 a0002c0016t0001	a0002c0016t0001g0151 a0002c0016t0001g0151	1	378	0.0027	20	c.306 others(37): Show c.3062+677_3062+696dupTTATTTTATTTTATTTTATT	PTPRH	ENSG00000080031.10	transcript	ENST00000376350.8	protein_coding	18/19		chr19	TogoVar
PTPRJ_chr11_47975559_48175839	48053182	T T	TATATATA others(13): Show TATATATAAAAATATATAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01071.hp1 HG01099.hp2 others(15): Show HG00597.hp2 HG01071.hp1 HG01099.hp2 HG01257.hp1 HG02602.hp2 HG02698.hp2 HG02723.hp1 HG02809.hp1 HG02895.hp1 HG02897.hp2 HG03209.hp1 HG03453.hp2 HG03540.hp1 HG03579.hp1 NA18522.hp2 NA18962.hp2 NA19085.hp2 NA20752.hp1	a0002 a0009 a0002 a0009	a0002c0001 a0009c0014 a0002c0001 a0009c0014	a0002c0001t0002 a0002c0001t0004 a0002c0001t0007 others(6): Show a0002c0001t0002 a0002c0001t0004 a0002c0001t0007 a0002c0001t0011 a0002c0001t0025 a0002c0001t0035 a0009c0014t0007 a0009c0014t0019 a0009c0014t0063	a0002c0001t0002g0026 a0002c0001t0002g0211 a0002c0001t0004g0052 others(15): Show a0002c0001t0002g0026 a0002c0001t0002g0211 a0002c0001t0004g0052 a0002c0001t0007g0023 a0002c0001t0007g0049 a0002c0001t0007g0050 a0002c0001t0011g0022 a0002c0001t0011g0027 a0002c0001t0011g0028 a0002c0001t0011g0051 a0002c0001t0025g0029 a0002c0001t0025g0030 a0002c0001t0025g0032 a0002c0001t0035g0047 a0002c0001t0035g0048 a0009c0014t0007g0025 a0009c0014t0019g0021 a0009c0014t0063g0024	18	216	0.0833	20	c.97- others(37): Show c.97-56857_97-56856insAATATATAAAAATATATAAA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48053230	T T	TATATATA others(13): Show TATATATAATATATTTATATA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02622.hp2 HG02647.hp2 others(5): Show HG02486.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp2 HG03041.hp2 HG03098.hp2 HG03139.hp1 NA19030.hp2	a0001 a0004 a0001 a0004	a0001c0004 a0004c0007 a0001c0004 a0004c0007	a0001c0004t0008 a0004c0007t0021 a0004c0007t0028 others(3): Show a0001c0004t0008 a0004c0007t0021 a0004c0007t0028 a0004c0007t0029 a0004c0007t0047 a0004c0007t0048	a0001c0004t0008g0134 a0004c0007t0021g0136 a0004c0007t0021g0137 others(5): Show a0001c0004t0008g0134 a0004c0007t0021g0136 a0004c0007t0021g0137 a0004c0007t0028g0133 a0004c0007t0029g0139 a0004c0007t0029g0140 a0004c0007t0047g0138 a0004c0007t0048g0135	8	216	0.0370	20	c.97- others(37): Show c.97-56820_97-56801dupATATATTTATATAATATATA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48159122	G G	GGGGTGTG others(13): Show GGGGTGTGTGTCTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0003 a0001c0003t0003g0003	1	216	0.0046	20	c.343 others(37): Show c.3439-807_3439-806insGGTGTGTGTCTGTGTGTGTG	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	21/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48159122	G G	GGGGTGTG others(13): Show GGGGTGTGTGTGTCTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01496.hp1 HG01517.hp1 others(6): Show HG01243.hp2 HG01496.hp1 HG01517.hp1 HG02280.hp1 HG02615.hp1 HG02818.hp1 HG03654.hp1 NA18906.hp2 NA20129.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0003 a0001c0005 a0002c0001 others(1): Show a0001c0003 a0001c0005 a0002c0001 a0008c0011	a0001c0003t0004 a0001c0003t0013 a0001c0005t0007 others(5): Show a0001c0003t0004 a0001c0003t0013 a0001c0005t0007 a0002c0001t0019 a0002c0001t0062 a0008c0011t0013 a0008c0011t0014 a0008c0011t0022	a0001c0003t0004g0001 a0001c0003t0013g0106 a0001c0005t0007g0205 others(6): Show a0001c0003t0004g0001 a0001c0003t0013g0106 a0001c0005t0007g0205 a0002c0001t0019g0031 a0002c0001t0062g0146 a0008c0011t0013g0131 a0008c0011t0014g0123 a0008c0011t0022g0105 a0008c0011t0022g0114	9	216	0.0417	20	c.343 others(37): Show c.3439-807_3439-806insGGTGTGTGTGTCTGTGTGTG	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	21/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRK_chr6_127963785_128525599	128461309	C C	CACTGTGG others(13): Show CACTGTGGTATAAAGGAATAA	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	53	0.0189	20	c.100 others(39): Show c.100+58930_100+58949dupTTATTCCTTTATACCACAGT	PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding	1/29		chr6	TogoVar
PTPRM_chr18_7562316_8411856	7772244	T T	TTTTTCTT others(13): Show TTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02723.hp2 HG02809.hp1 others(3): Show HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02896.hp1 HG03486.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0002c0009	a0001c0002t0001 a0001c0002t0002 a0001c0003t0002 others(3): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0002c0009t0001	a0001c0002t0001g0065 a0001c0002t0002g0013 a0001c0003t0002g0003 others(3): Show a0001c0002t0001g0065 a0001c0002t0002g0013 a0001c0003t0002g0003 a0001c0004t0001g0055 a0001c0004t0002g0021 a0002c0009t0001g0067	6	80	0.0750	20	c.74- others(35): Show c.74-1881_74-1862dupTCTTTTCTTTTCTTTTCTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	1/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7772349	C C	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0063 a0001c0004t0001g0063	1	80	0.0125	20	c.74- others(35): Show c.74-1754_74-1735dupCTTTCTTTCTTTCTTTCTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	1/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7772444	C C	CCCTTCCT others(13): Show CCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0009 a0001c0005t0001g0009	1	80	0.0125	20	c.74- others(35): Show c.74-1663_74-1644dupCTTCCTTCCTTCCTTCCTTC	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	1/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7834528	A A	ACACACAC others(13): Show ACACACACACACACACACACT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0003 a0001c0018t0003	a0001c0018t0003g0079 a0001c0018t0003g0079	1	80	0.0125	20	c.197 others(39): Show c.197-53577_197-53576insACACACACACACACACACTC	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842930	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0024 a0001c0005t0002g0024	1	80	0.0125	20	c.197 others(39): Show c.197-45175_197-45174insGTGTGTATATATATATATAT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842930	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTATATA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	80	0.0125	20	c.197 others(39): Show c.197-45175_197-45174insGTGTGTGTGTGTGTATATAT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842947	T T	TATATAGA others(13): Show TATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0054 a0002c0007t0001g0054	1	80	0.0125	20	c.197 others(39): Show c.197-45158_197-45157insTATAGAGAGAGAGAGAGAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842947	T T	TATATATA others(13): Show TATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03540.hp1 NA19043.hp1 HG03195.hp1 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0005 a0001c0002t0001 a0001c0004t0001 a0001c0001t0005 a0001c0002t0001 a0001c0004t0001	a0001c0001t0005g0036 a0001c0002t0001g0042 a0001c0004t0001g0066 a0001c0001t0005g0036 a0001c0002t0001g0042 a0001c0004t0001g0066	3	80	0.0375	20	c.197 others(39): Show c.197-45158_197-45157insTATATATATAGAGAGAGAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842947	T T	TATATATA others(13): Show TATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02559.hp2 HG02622.hp2 HG00639.hp2 HG02559.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 a0001c0001 a0001c0004 a0001c0006	a0001c0001t0002 a0001c0004t0002 a0001c0006t0004 a0001c0001t0002 a0001c0004t0002 a0001c0006t0004	a0001c0001t0002g0027 a0001c0004t0002g0028 a0001c0006t0004g0070 a0001c0001t0002g0027 a0001c0004t0002g0028 a0001c0006t0004g0070	3	80	0.0375	20	c.197 others(39): Show c.197-45158_197-45157insTATATATATATAGAGAGAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7842947	T T	TATATATA others(13): Show TATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0001 a0002c0010t0001	a0002c0010t0001g0047 a0002c0010t0001g0047	1	80	0.0125	20	c.197 others(39): Show c.197-45158_197-45157insTATATATATATATAGAGAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	2/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7960480	T T	TATATATA others(13): Show TATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0035 a0001c0012t0002g0035	1	80	0.0125	20	c.113 others(39): Show c.1132+5067_1132+5068insTATATATATATACACACACA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7960480	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02145.hp2 HG01884.hp1 HG02145.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0005 a0001c0003t0002g0022 a0001c0003t0001g0005 a0001c0003t0002g0022	2	80	0.0250	20	c.113 others(39): Show c.1132+5067_1132+5068insTATATATATATATATACACA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32	INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7984572	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0002 a0001c0012t0002	a0001c0012t0002g0035 a0001c0012t0002g0035	1	80	0.0125	20	c.113 others(41): Show c.1132+29170_1132+29189dupTATATATATATATATATATA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32	INFO_REALIGN_3_PRIME	chr18	TogoVar

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