Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SVEP1_chr9_110360248_110584741	110403296	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0015 a0015	a0015c0011 a0015c0011	a0015c0011t0002 a0015c0011t0002	a0015c0011t0002g0317 a0015c0011t0002g0317	1	59	0.0169	20	c.966 others(39): Show c.9666+1011_9666+1030dupAAAAAAAAAAAAAAAAAAAA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	39/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110428399	A A	AACACACA others(13): Show AACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0069 a0069	a0069c0073 a0069c0073	a0069c0073t0004 a0069c0073t0004	a0069c0073t0004g0347 a0069c0073t0004g0347	1	258	0.0039	20	c.580 others(37): Show c.5808-661_5808-642dupGTGTGTGTGTGTGTGTGTGT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	35/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110434666	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01261.hp2 HG02300.hp2 others(1): Show HG01070.hp1 HG01261.hp2 HG02300.hp2 NA21309.hp2	a0008 a0039 a0053 others(1): Show a0008 a0039 a0053 a0080	a0008c0013 a0039c0057 a0053c0161 others(1): Show a0008c0013 a0039c0057 a0053c0161 a0080c0105	a0008c0013t0003 a0039c0057t0003 a0053c0161t0011 others(1): Show a0008c0013t0003 a0039c0057t0003 a0053c0161t0011 a0080c0105t0003	a0008c0013t0003g0196 a0039c0057t0003g0258 a0053c0161t0011g0003 others(1): Show a0008c0013t0003g0196 a0039c0057t0003g0258 a0053c0161t0011g0003 a0080c0105t0003g0348	4	39	0.1026	20	c.488 others(37): Show c.4889-180_4889-161dupTTTTTTTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	29/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110466760	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp1 HG00621.hp2 others(19): Show HG00558.hp1 HG00621.hp1 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG01243.hp1 HG01928.hp1 HG01928.hp2 HG02083.hp1 HG02148.hp2 HG02165.hp2 HG02572.hp2 HG03492.hp1 HG06807.hp2 NA18952.hp1 NA18967.hp1 NA18972.hp2 NA18998.hp1 NA19001.hp2 NA19057.hp2 NA19064.hp2 NA20300.hp2	a0003 a0006 a0009 others(7): Show a0003 a0006 a0009 a0011 a0019 a0030 a0044 a0066 a0106 a0112	a0003c0004 a0003c0143 a0006c0003 others(9): Show a0003c0004 a0003c0143 a0006c0003 a0006c0163 a0009c0010 a0011c0009 a0019c0015 a0030c0034 a0044c0052 a0066c0135 a0106c0110 a0112c0104	a0003c0004t0001 a0003c0143t0001 a0006c0003t0001 others(10): Show a0003c0004t0001 a0003c0143t0001 a0006c0003t0001 a0006c0163t0006 a0009c0010t0003 a0011c0009t0001 a0019c0015t0003 a0030c0034t0001 a0030c0034t0005 a0044c0052t0002 a0066c0135t0001 a0106c0110t0001 a0112c0104t0003	a0003c0004t0001g0031 a0003c0004t0001g0118 a0003c0004t0001g0309 others(19): Show a0003c0004t0001g0031 a0003c0004t0001g0118 a0003c0004t0001g0309 a0003c0143t0001g0204 a0006c0003t0001g0112 a0006c0003t0001g0117 a0006c0003t0001g0138 a0006c0003t0001g0143 a0006c0003t0001g0240 a0006c0003t0001g0291 a0006c0163t0006g0014 a0009c0010t0003g0229 a0009c0010t0003g0242 a0011c0009t0001g0217 a0011c0009t0001g0256 a0019c0015t0003g0155 a0030c0034t0001g0086 a0030c0034t0005g0121 a0044c0052t0002g0289 a0066c0135t0001g0061 a0106c0110t0001g0331 a0112c0104t0003g0038	22	50	0.4400	20	c.316 others(37): Show c.3161-735_3161-734insTTTTTTTTTTTTTTTTTTTT	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	17/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTATGT others(13): Show GTGTATGTATGTATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0048 a0048	a0048c0050 a0048c0050	a0048c0050t0004 a0048c0050t0004	a0048c0050t0004g0120 a0048c0050t0004g0120	1	120	0.0083	20	c.965 others(39): Show c.965-14051_965-14050insTATATATATACATACATACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 NA19077.hp2 HG00642.hp2 NA19077.hp2	a0038 a0064 a0038 a0064	a0038c0023 a0064c0066 a0038c0023 a0064c0066	a0038c0023t0001 a0064c0066t0003 a0038c0023t0001 a0064c0066t0003	a0038c0023t0001g0189 a0064c0066t0003g0042 a0038c0023t0001g0189 a0064c0066t0003g0042	2	121	0.0165	20	c.965 others(39): Show c.965-14051_965-14050insTATATATATATATATACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01952.hp2 HG01071.hp2 HG01952.hp2	a0023 a0029 a0023 a0029	a0023c0036 a0029c0021 a0023c0036 a0029c0021	a0023c0036t0001 a0029c0021t0001 a0023c0036t0001 a0029c0021t0001	a0023c0036t0001g0130 a0029c0021t0001g0248 a0023c0036t0001g0130 a0029c0021t0001g0248	2	121	0.0165	20	c.965 others(39): Show c.965-14051_965-14050insTATATATATATATACACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTGT others(13): Show GTGTGTGTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02273.hp1 HG01516.hp1 HG02273.hp1	a0043 a0044 a0043 a0044	a0043c0147 a0044c0052 a0043c0147 a0044c0052	a0043c0147t0004 a0044c0052t0002 a0043c0147t0004 a0044c0052t0002	a0043c0147t0004g0052 a0044c0052t0002g0247 a0043c0147t0004g0052 a0044c0052t0002g0247	2	121	0.0165	20	c.965 others(39): Show c.965-14051_965-14050insTATATATATATACACACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVEP1_chr9_110360248_110584741	110528156	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01516.hp2 HG01517.hp1 HG01106.hp2 HG01516.hp2 HG01517.hp1	a0001 a0001	a0001c0002 a0001c0123 a0001c0002 a0001c0123	a0001c0002t0004 a0001c0123t0004 a0001c0002t0004 a0001c0123t0004	a0001c0002t0004g0160 a0001c0002t0004g0161 a0001c0123t0004g0021 a0001c0002t0004g0160 a0001c0002t0004g0161 a0001c0123t0004g0021	3	122	0.0246	20	c.965 others(39): Show c.965-14051_965-14050insTATATATATACACACACACA	SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	3/47			chr9	TogoVar
SVIL_chr10_29452338_29639971	29509330	G G	GGAGAGAG others(13): Show GGAGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG03927.hp2 HG02155.hp1 HG03927.hp2	a0001 a0001	a0001c0002 a0001c0077 a0001c0002 a0001c0077	a0001c0002t0001 a0001c0077t0001 a0001c0002t0001 a0001c0077t0001	a0001c0002t0001g0114 a0001c0077t0001g0053 a0001c0002t0001g0114 a0001c0077t0001g0053	2	74	0.0270	20	c.351 others(39): Show c.3516+3385_3516+3404dupTCTCTCTCTCTCTCTCTCTC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVIL_chr10_29452338_29639971	29509330	G G	GGAGGGAG others(13): Show GGAGGGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA18990.hp2	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0001 a0003c0010t0001	a0003c0010t0001g0251 a0003c0010t0001g0251	1	73	0.0137	20	c.351 others(39): Show c.3516+3404_3516+3405insTCTCTCTCTCTCTCTCCCTC	SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	17/37			chr10	TogoVar
SVIP_chr11_22813927_22834801	22831605	A A	AGGAGGGG others(13): Show AGGAGGGGAGGGGAGGGGAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG03540.hp1 HG02818.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0013 a0001c0001t0007g0013	2	244	0.0082	20	c.-18 others(31): Show c.-1858_-1857insCCTCCCCTCCCCTCCCCTCC	SVIP	ENSG00000198168.9	transcript	ENST00000354193.5	protein_coding		1805		chr11	TogoVar
SVOPL_chr7_138589285_138706362	138602441	C C	CTATATAT others(13): Show CTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03139.hp1 NA19043.hp1 HG03139.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0330 a0001c0001t0001g0011 a0001c0001t0001g0330	2	19	0.1053	20	c.135 others(39): Show c.1354-5931_1354-5912dupTATATATATATATATATATA	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	14/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138615560	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0042 a0002c0003t0001g0042	1	294	0.0034	20	c.135 others(39): Show c.1353+5466_1353+5485dupTTTTTTTTTTTTTTTTTTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	14/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138631960	T T	TCACACAC others(13): Show TCACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01943.hp1 HG02055.hp1 others(10): Show HG01515.hp1 HG01943.hp1 HG02055.hp1 HG02145.hp2 HG03704.hp2 HG03710.hp1 NA18944.hp1 NA18969.hp2 NA18998.hp1 NA19007.hp2 NA19062.hp1 NA19066.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0003 a0001c0005t0001 a0001c0005t0002 a0001c0026t0003	a0001c0001t0001g0188 a0001c0001t0002g0141 a0001c0001t0002g0158 others(10): Show a0001c0001t0001g0188 a0001c0001t0002g0141 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0003g0035 a0001c0002t0001g0050 a0001c0002t0003g0263 a0001c0005t0001g0166 a0001c0005t0002g0022 a0001c0005t0002g0037 a0001c0005t0002g0308 a0001c0005t0002g0334 a0001c0026t0003g0207	13	209	0.0622	20	c.790 others(37): Show c.790-1858_790-1839dupTGTGTGTGTGTGTGTGTGTG	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138637463	T T	TATATATA others(13): Show TATATATAGATATAGATATAG	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0144 a0002c0003t0001g0144	1	350	0.0029	20	c.789 others(37): Show c.789+7253_789+7254insCTATATCTATATCTATATAT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138641814	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02572.hp1 NA19091.hp1 HG00733.hp1 HG02572.hp1 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0003 a0002c0006 a0001c0005 a0002c0003 a0002c0006	a0001c0005t0001 a0002c0003t0001 a0002c0006t0002 a0001c0005t0001 a0002c0003t0001 a0002c0006t0002	a0001c0005t0001g0063 a0002c0003t0001g0030 a0002c0006t0002g0258 a0001c0005t0001g0063 a0002c0003t0001g0030 a0002c0006t0002g0258	3	74	0.0405	20	c.789 others(37): Show c.789+2883_789+2902dupTATATATATATATATATATA	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138642831	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 NA18973.hp2 NA19010.hp1 others(2): Show HG02895.hp2 NA18973.hp2 NA19010.hp1 NA19058.hp1 NA19083.hp2	a0003 a0004 a0003 a0004	a0003c0007 a0003c0011 a0004c0013 a0003c0007 a0003c0011 a0004c0013	a0003c0007t0001 a0003c0011t0001 a0003c0011t0002 others(1): Show a0003c0007t0001 a0003c0011t0001 a0003c0011t0002 a0004c0013t0001	a0003c0007t0001g0223 a0003c0007t0001g0261 a0003c0011t0001g0310 others(2): Show a0003c0007t0001g0223 a0003c0007t0001g0261 a0003c0011t0001g0310 a0003c0011t0002g0008 a0004c0013t0001g0069	5	307	0.0163	20	c.789 others(37): Show c.789+1885_789+1886insTTTTTTTTTTTTTTTTTTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	9/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138693529	A A	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01175.hp2 HG02280.hp2 others(6): Show HG01070.hp2 HG01175.hp2 HG02280.hp2 HG02630.hp2 HG02647.hp1 HG03098.hp1 NA18747.hp1 NA18950.hp1 NA18966.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0014 others(2): Show a0001c0001 a0001c0002 a0001c0014 a0002c0003 a0003c0007	a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 others(5): Show a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0014t0001 a0002c0003t0001 a0002c0003t0002 a0003c0007t0001	a0001c0001t0003g0348 a0001c0001t0005g0106 a0001c0002t0001g0210 others(6): Show a0001c0001t0003g0348 a0001c0001t0005g0106 a0001c0002t0001g0210 a0001c0002t0002g0149 a0001c0014t0001g0109 a0002c0003t0001g0121 a0002c0003t0001g0122 a0002c0003t0002g0110 a0003c0007t0001g0077	9	70	0.1286	20	c.-35 others(37): Show c.-35+7629_-35+7648dupCTTTCTTTCTTTCTTTCTTT	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138693564	A A	AGAAAGAA others(13): Show AGAAAGAAAGAAAGAAAAAAG	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp1 HG03041.hp2 others(2): Show HG01884.hp2 HG02922.hp1 HG03041.hp2 NA18906.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0002c0006t0003 a0001c0001t0001 a0002c0006t0003	a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0243 others(2): Show a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0002c0006t0003g0240	5	344	0.0145	20	c.-35 others(37): Show c.-35+7613_-35+7614insCTTTTTTCTTTCTTTCTTTC	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15			chr7	TogoVar
SVOPL_chr7_138589285_138706362	138700715	T T	TGGATGGA others(13): Show TGGATGGATGGATGGATGGCA	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0336 a0001c0001t0001g0336	1	321	0.0031	20	c.-35 others(35): Show c.-35+462_-35+463insTGCCATCCATCCATCCATCC	SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15			chr7	TogoVar
SVOP_chr12_108902741_109026068	108903287	G G	GAGAAAGG others(13): Show GAGAAAGGAAGGAAGGAAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02965.hp1 HG02976.hp2 others(2): Show HG01884.hp2 HG02965.hp1 HG02976.hp2 HG03516.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0037 a0001c0001t0066 a0001c0001t0067 others(2): Show a0001c0001t0037 a0001c0001t0066 a0001c0001t0067 a0001c0002t0006 a0001c0002t0032	a0001c0001t0037g0010 a0001c0001t0066g0154 a0001c0001t0067g0182 others(2): Show a0001c0001t0037g0010 a0001c0001t0066g0154 a0001c0001t0067g0182 a0001c0002t0006g0164 a0001c0002t0032g0177	5	110	0.0455	20	c.92 others(31): Show c.9247_*9248insTCCTTCCTTCCTTCCTTTCT	SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding		4453		chr12	TogoVar
SVOP_chr12_108902741_109026068	108903287	G G	GAGGAAGG others(13): Show GAGGAAGGAAGGAAGGAAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp1 HG02886.hp1 HG02886.hp2 HG02559.hp1 HG02886.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0002t0071 a0001c0001t0008 a0001c0002t0071	a0001c0001t0008g0245 a0001c0001t0008g0246 a0001c0002t0071g0274 a0001c0001t0008g0245 a0001c0001t0008g0246 a0001c0002t0071g0274	3	108	0.0278	20	c.92 others(31): Show c.9247_*9248insTCCTTCCTTCCTTCCTTCCT	SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding		4453		chr12	TogoVar
SVOP_chr12_108902741_109026068	108936023	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03540.hp1 HG02717.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0036 a0001c0002t0002 a0001c0002t0036	a0001c0002t0002g0248 a0001c0002t0036g0049 a0001c0002t0002g0248 a0001c0002t0036g0049	2	101	0.0198	20	c.971 others(37): Show c.971+1221_971+1240dupGTGTGTGTGTGTGTGTGTGT	SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding	10/15			chr12	TogoVar
SWAP70_chr11_9659077_9757993	9686344	C C	CTTATTTA others(13): Show CTTATTTATTTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02257.hp1 HG02273.hp1 others(10): Show HG02135.hp1 HG02257.hp1 HG02273.hp1 HG02280.hp1 HG02647.hp1 HG03130.hp1 HG03654.hp2 NA18968.hp2 NA18975.hp1 NA18983.hp2 NA19007.hp2 NA19074.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0002c0004	a0001c0002t0002 a0001c0002t0033 a0001c0003t0010 others(3): Show a0001c0002t0002 a0001c0002t0033 a0001c0003t0010 a0002c0001t0001 a0002c0001t0005 a0002c0004t0001	a0001c0002t0002g0140 a0001c0002t0002g0158 a0001c0002t0002g0243 others(10): Show a0001c0002t0002g0140 a0001c0002t0002g0158 a0001c0002t0002g0243 a0001c0002t0033g0151 a0001c0003t0010g0262 a0002c0001t0001g0065 a0002c0001t0005g0061 a0002c0004t0001g0123 a0002c0004t0001g0143 a0002c0004t0001g0178 a0002c0004t0001g0184 a0002c0004t0001g0192 a0002c0004t0001g0264	13	67	0.1940	20	c.100 others(37): Show c.100-7791_100-7772dupATTTATTTATTTATTTATTT	SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
SWAP70_chr11_9659077_9757993	9725530	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0007 a0002c0005t0007	a0002c0005t0007g0027 a0002c0005t0007g0027	1	249	0.0040	20	c.642 others(35): Show c.642+666_642+685dupATATATATATATATATATAT	SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
SWT1_chr1_185152167_185296781	185228167	G G	GTATGTAT others(13): Show GTATGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03654.hp1 NA19074.hp2 HG03654.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0276 a0001c0001t0002g0280 a0001c0001t0002g0276 a0001c0001t0002g0280	2	228	0.0088	20	c.231 others(39): Show c.2310-3409_2310-3408insATGTATATATATATATATAT	SWT1	ENSG00000116668.13	transcript	ENST00000367500.9	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYCE1L_chr16_77194408_77218215	77200291	T T	TATACATA others(13): Show TATACATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0089 a0002c0003t0001g0089	1	198	0.0051	20	c.61+ others(33): Show c.61+780_61+781insTACATATATATATATATACA	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
SYCE1L_chr16_77194408_77218215	77200291	T T	TATATATA others(13): Show TATATATACATATATATATAC	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0090 a0002c0003t0001g0090	1	198	0.0051	20	c.61+ others(33): Show c.61+780_61+781insTATATACATATATATATACA	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
SYCE1L_chr16_77194408_77218215	77200291	T T	TATATATA others(13): Show TATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01256.hp1 HG01258.hp1 others(10): Show HG00738.hp2 HG01256.hp1 HG01258.hp1 HG02055.hp2 HG02109.hp1 HG02486.hp2 HG02572.hp2 HG02630.hp2 HG02723.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0001 a0001c0001t0003 a0002c0003t0001	a0001c0001t0003g0013 a0001c0001t0003g0051 a0001c0001t0003g0118 others(5): Show a0001c0001t0003g0013 a0001c0001t0003g0051 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0002c0003t0001g0092	13	210	0.0619	20	c.61+ others(33): Show c.61+780_61+781insTATATATATATATATACACA	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
SYCE1L_chr16_77194408_77218215	77200291	T T	TATATATA others(13): Show TATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00597.hp2 others(9): Show HG00099.hp1 HG00280.hp2 HG00597.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01169.hp1 HG01258.hp2 NA18943.hp1 NA18968.hp1 NA18987.hp2 NA19062.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0011 a0002c0003t0001g0041 a0002c0003t0001g0093 others(3): Show a0002c0003t0001g0011 a0002c0003t0001g0041 a0002c0003t0001g0093 a0002c0003t0001g0094 a0002c0003t0001g0095 a0002c0003t0001g0096	12	209	0.0574	20	c.61+ others(33): Show c.61+780_61+781insTATATATATATATATATACA	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
SYCE1L_chr16_77194408_77218215	77215742	C C	CTCTTTTT others(13): Show CTCTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01261.hp2 others(14): Show HG01167.hp2 HG01169.hp2 HG01261.hp2 HG02071.hp1 HG02165.hp1 HG02165.hp2 NA18612.hp1 NA18949.hp1 NA18975.hp1 NA18988.hp1 NA19005.hp2 NA19009.hp2 NA19064.hp2 NA19070.hp2 NA19074.hp1 NA19081.hp1 NA19083.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0039 a0001c0002t0001g0040 others(3): Show a0001c0002t0001g0002 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0080 a0001c0002t0001g0082 a0001c0002t0001g0085	17	18	0.9444	20	c.28 others(31): Show c.2811_*2812insTCTTTTTTTTTTTTTTTTTT	SYCE1L	ENSG00000205078.6	transcript	ENST00000378644.5	protein_coding		2528		chr16	TogoVar
SYCE2_chr19_12893786_12924293	12920094	T T	TACACACA others(13): Show TACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	373	0.0027	20	c.-83 others(29): Show c.-838_-837insGTGTGTGTGTGTGTGTGTGT	SYCE2	ENSG00000161860.8	transcript	ENST00000293695.8	protein_coding		802		chr19	TogoVar
SYCE2_chr19_12893786_12924293	12920096	T T	TACACACA others(13): Show TACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp1 NA18971.hp2 NA18993.hp1 others(1): Show HG03017.hp1 NA18971.hp2 NA18993.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0218 a0001c0001t0001g0024 a0001c0001t0001g0218	4	265	0.0151	20	c.-84 others(29): Show c.-840_-839insGTGTGTGTGTGTGTGTGTGT	SYCE2	ENSG00000161860.8	transcript	ENST00000293695.8	protein_coding		804		chr19	TogoVar
SYCE3_chr22_50546112_50567919	50553202	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01361.hp1 HG01884.hp1 others(13): Show HG01243.hp2 HG01361.hp1 HG01884.hp1 HG02109.hp1 HG02165.hp2 HG02559.hp1 HG02572.hp2 HG03017.hp2 HG03041.hp1 HG03209.hp2 HG03516.hp1 HG03669.hp1 NA19005.hp2 NA19030.hp2 NA19043.hp1 NA19089.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0018 a0002c0002t0001g0045 a0002c0002t0001g0173 others(9): Show a0002c0002t0001g0018 a0002c0002t0001g0045 a0002c0002t0001g0173 a0002c0002t0001g0174 a0002c0002t0001g0175 a0002c0002t0001g0176 a0002c0002t0001g0178 a0002c0002t0001g0179 a0002c0002t0001g0185 a0002c0002t0001g0186 a0002c0002t0001g0187 a0002c0002t0001g0188	16	397	0.0403	20	c.110 others(37): Show c.110-1820_110-1801dupATTTATTTATTTATTTATTT	SYCE3	ENSG00000217442.4	transcript	ENST00000406915.4	protein_coding	2/2			chr22	TogoVar
SYCP1_chr1_114849863_115000370	114857136	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02280.hp1 HG02572.hp2 HG01891.hp2 HG02280.hp1 HG02572.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0127 a0002c0004t0001g0141 a0002c0004t0001g0142 a0002c0004t0001g0127 a0002c0004t0001g0141 a0002c0004t0001g0142	3	146	0.0205	20	c.194 others(33): Show c.194-94_194-75dupAAAAAAAAAAAAAAAAAAAA	SYCP1	ENSG00000198765.12	transcript	ENST00000369522.8	protein_coding	3/31		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYCP1_chr1_114849863_115000370	114881501	A A	ATCCTTCC others(13): Show ATCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp2 HG01169.hp1 others(22): Show HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01934.hp2 HG02109.hp2 HG02135.hp1 HG02615.hp2 HG02647.hp1 HG02809.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03516.hp2 HG03704.hp2 HG04184.hp1 NA18960.hp2 NA18961.hp1 NA18993.hp2 NA19030.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0002t0001 a0001c0006t0003 a0001c0001t0001 a0001c0002t0001 a0001c0006t0003	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0016 others(22): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0034 a0001c0001t0001g0050 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0140 a0001c0001t0001g0270 a0001c0002t0001g0121 a0001c0002t0001g0129 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0006t0003g0308	25	102	0.2451	20	c.910 others(37): Show c.910+3321_910+3340dupCCTTCCTTCCTTCCTTCCTT	SYCP1	ENSG00000198765.12	transcript	ENST00000369522.8	protein_coding	12/31		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYCP1_chr1_114849863_115000370	114954547	T T	TTTTATTT others(13): Show TTTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0004 a0004	a0004c0009 a0004c0009	a0004c0009t0001 a0004c0009t0001	a0004c0009t0001g0310 a0004c0009t0001g0310	1	250	0.0040	20	c.232 others(39): Show c.2322+7243_2322+7262dupATTTATTTATTTATTTATTT	SYCP1	ENSG00000198765.12	transcript	ENST00000369522.8	protein_coding	27/31		INFO_REALIGN_3_PRIME	chr1	TogoVar
SYCP2L_chr6_10882052_10979309	10883180	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19065.hp1 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	46	0.0217	20	c.-39 others(31): Show c.-3947_-3946insTTTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		3871		chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10886106	T T	TGCACGTG others(13): Show TGCACGTGTCACAGCAAGCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0297 a0002c0003t0002g0297	1	352	0.0028	20	c.-10 others(31): Show c.-1021_-1020insGCACGTGTCACAGCAAGCTG	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		945		chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10907892	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01074.hp1 HG01361.hp2 others(13): Show HG00741.hp2 HG01074.hp1 HG01361.hp2 HG01516.hp2 HG02145.hp1 HG02257.hp2 HG02572.hp2 HG02717.hp1 HG02886.hp2 HG02922.hp1 HG03453.hp2 HG03942.hp2 HG04199.hp1 HG06807.hp2 NA18522.hp1 NA18989.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0013	a0001c0001 a0001c0013 a0002c0003 others(3): Show a0001c0001 a0001c0013 a0002c0003 a0003c0004 a0005c0009 a0013c0026	a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 a0002c0003t0002 a0003c0004t0001 a0005c0009t0002 a0013c0026t0001	a0001c0001t0001g0026 a0001c0001t0001g0034 a0001c0001t0001g0107 others(13): Show a0001c0001t0001g0026 a0001c0001t0001g0034 a0001c0001t0001g0107 a0001c0001t0001g0152 a0001c0001t0001g0184 a0001c0001t0001g0244 a0001c0001t0002g0121 a0001c0001t0002g0123 a0001c0001t0002g0159 a0001c0001t0002g0162 a0001c0001t0002g0185 a0001c0013t0001g0040 a0002c0003t0002g0324 a0003c0004t0001g0269 a0005c0009t0002g0081 a0013c0026t0001g0006	16	33	0.4848	20	c.819 others(35): Show c.819+226_819+227insTTTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	10/29		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10911894	C C	CTTTCTTT others(13): Show CTTTCTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03471.hp1 HG03139.hp2 HG03471.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0002 a0004c0005t0002	a0004c0005t0002g0019 a0004c0005t0002g0020 a0004c0005t0002g0019 a0004c0005t0002g0020	2	25	0.0800	20	c.919 others(35): Show c.919-776_919-775insCTTTTTTTTTTTTTTTTTTT	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	12/29		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10967454	G G	GGGGTGTG others(13): Show GGGGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01928.hp2 HG01928.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	97	0.0103	20	c.37 others(37): Show c.37+3612_*37+3613insGGTGTGTGTGTGTGTGTGTG	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	29/29		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10978306	T T	TATATATA others(13): Show TATATATATATATATATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0309 a0002c0003t0001g0309	1	202	0.0050	20	c.43 others(31): Show c.4392_*4393insATATATATATATATATATAA	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		3998		chr6	TogoVar
SYCP2L_chr6_10882052_10979309	10978310	T T	TATATATA others(13): Show TATATATATATATATATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0003 a0004c0005t0003	a0004c0005t0003g0237 a0004c0005t0003g0237	1	300	0.0033	20	c.43 others(31): Show c.4396_*4397insATATATATATATATATATAA	SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding		4002		chr6	TogoVar
SYCP2_chr20_59858571_59938637	59867105	C C	CGGGGGGG others(13): Show CGGGGGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0107	1	56	0.0179	20	c.412 others(37): Show c.4126-517_4126-516insCCCCCCCCCCCCCCCCCCCC	SYCP2	ENSG00000196074.13	transcript	ENST00000357552.8	protein_coding	39/44			chr20	TogoVar
SYCP3_chr12_101723648_101744462	101735871	A A	ATATATAT others(13): Show ATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG02055.hp1 others(4): Show HG01243.hp2 HG01891.hp1 HG02055.hp1 HG03453.hp1 HG03579.hp1 NA19043.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0203 a0001c0001t0001g0006 a0001c0001t0001g0203	7	126	0.0556	20	c.236 others(35): Show c.236-828_236-827insAAAAAAAAAAAATATATATA	SYCP3	ENSG00000139351.15	transcript	ENST00000392924.2	protein_coding	4/8			chr12	TogoVar
SYK_chr9_90796819_90903549	90802815	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG03195.hp1 HG03486.hp1 HG00741.hp2 HG03195.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0008 a0001c0001 a0001c0002 a0001c0008	a0001c0001t0059 a0001c0002t0021 a0001c0008t0039 a0001c0001t0059 a0001c0002t0021 a0001c0008t0039	a0001c0001t0059g0063 a0001c0002t0021g0061 a0001c0008t0039g0062 a0001c0001t0059g0063 a0001c0002t0021g0061 a0001c0008t0039g0062	3	6	0.5000	20	c.-42 others(35): Show c.-42+934_-42+935insAAAAAAAAAAAAAAAAAAAA	SYK	ENSG00000165025.15	transcript	ENST00000375754.9	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr9	TogoVar
SYK_chr9_90796819_90903549	90884150	T T	TGTATATA others(13): Show TGTATATATATATACACATAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0071 a0001c0001t0071	a0001c0001t0071g0223 a0001c0001t0071g0223	1	257	0.0039	20	c.158 others(39): Show c.1582-3597_1582-3596insATATATATATACACATACGT	SYK	ENSG00000165025.15	transcript	ENST00000375754.9	protein_coding	11/13		INFO_REALIGN_3_PRIME	chr9	TogoVar
SYK_chr9_90796819_90903549	90884157	A A	ATATATAT others(13): Show ATATATATATACACATACGTG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03041.hp2 HG01109.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0357 a0001c0001t0027g0362 a0001c0001t0027g0357 a0001c0001t0027g0362	2	374	0.0053	20	c.158 others(39): Show c.1582-3588_1582-3587insTATATACACATACGTGTATA	SYK	ENSG00000165025.15	transcript	ENST00000375754.9	protein_coding	11/13		INFO_REALIGN_3_PRIME	chr9	TogoVar

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