Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THAP11_chr16_67837320_67849195	67841010	C C	CATATATA others(13): Show CATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp2 NA20752.hp1 HG01070.hp1 HG01071.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	3	9	0.3333	20	c.-15 others(31): Show c.-1545_-1544insATATATATATATATATATAT	THAP11	ENSG00000168286.3	transcript	ENST00000303596.3	protein_coding		1309		chr16	TogoVar
THAP4_chr2_241579405_241642158	241585912	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG03017.hp2 NA18948.hp2 HG02080.hp1 HG03017.hp2 NA18948.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0302 a0001c0002t0001g0346 a0001c0002t0001g0351 a0001c0002t0001g0302 a0001c0002t0001g0346 a0001c0002t0001g0351	3	268	0.0112	20	c.161 others(39): Show c.1615-1188_1615-1187insTTTTTTTTTTTTTTTTTTTT	THAP4	ENSG00000176946.13	transcript	ENST00000407315.6	protein_coding	5/5			chr2	TogoVar
THAP4_chr2_241579405_241642158	241637872	G G	GGGGCGGT others(13): Show GGGGCGGTGTTGGTGGGTGGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp2 HG01071.hp1 HG02572.hp2 HG00741.hp2 HG01071.hp1 HG02572.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0090 a0002c0003t0001g0093 a0002c0003t0001g0098 a0002c0003t0001g0090 a0002c0003t0001g0093 a0002c0003t0001g0098	3	388	0.0077	20	c.-87 others(29): Show c.-875_-856dupACCACCCACCAACACCGCCC	THAP4	ENSG00000176946.13	transcript	ENST00000407315.6	protein_coding		715		chr2	TogoVar
THAP5_chr7_108557132_108574706	108558377	G G	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02080.hp2 HG06807.hp2 HG02055.hp1 HG02080.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0012 a0001c0001t0008 a0001c0001t0012	a0001c0001t0008g0008 a0001c0001t0012g0011 a0001c0001t0008g0008 a0001c0001t0012g0011	3	336	0.0089	20	c.58 others(31): Show c.5813_*5814insTATATATATATATATACACA	THAP5	ENSG00000177683.14	transcript	ENST00000415914.4	protein_coding		3754		chr7	TogoVar
THAP5_chr7_108557132_108574706	108558377	G G	GTGTGTGT others(13): Show GTGTGTGTATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01361.hp1 HG02056.hp1 others(10): Show HG00741.hp2 HG01361.hp1 HG02056.hp1 HG02683.hp2 HG02723.hp1 HG02738.hp2 HG03195.hp1 HG03669.hp1 HG04228.hp2 NA18940.hp1 NA18948.hp1 NA18955.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0027 a0001c0001t0003 a0001c0001t0027	a0001c0001t0003g0003 a0001c0001t0003g0013 a0001c0001t0027g0033 a0001c0001t0003g0003 a0001c0001t0003g0013 a0001c0001t0027g0033	13	346	0.0376	20	c.58 others(31): Show c.5813_*5814insTATATATATATATACACACA	THAP5	ENSG00000177683.14	transcript	ENST00000415914.4	protein_coding		3754		chr7	TogoVar
THAP5_chr7_108557132_108574706	108558377	G G	GTGTGTGT others(13): Show GTGTGTGTGTATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0003	1	334	0.0030	20	c.58 others(31): Show c.5813_*5814insTATATATATATACACACACA	THAP5	ENSG00000177683.14	transcript	ENST00000415914.4	protein_coding		3754		chr7	TogoVar
THAP5_chr7_108557132_108574706	108558381	G G	GTATATAT others(13): Show GTATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG03471.hp2 HG02970.hp1 HG03471.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0032 a0003c0004t0018 a0001c0001t0032 a0003c0004t0018	a0001c0001t0032g0036 a0003c0004t0018g0063 a0001c0001t0032g0036 a0003c0004t0018g0063	2	51	0.0392	20	c.57 others(31): Show c.5790_*5809dupTATATATATATATATATATA	THAP5	ENSG00000177683.14	transcript	ENST00000415914.4	protein_coding		3750		chr7	TogoVar
THAP8_chr19_36029984_36059285	36037380	A A	ACACACAC others(13): Show ACACACACACACACACACACC	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	437	0.0023	20	c.673 others(37): Show c.673-1789_673-1788insGGTGTGTGTGTGTGTGTGTG	THAP8	ENSG00000161277.11	transcript	ENST00000292894.2	protein_coding	3/3			chr19	TogoVar
THBS1_chr15_39576079_39604466	39581639	C C	CCTCTCTC others(13): Show CCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0025 a0001c0025	a0001c0025t0023 a0001c0025t0023	a0001c0025t0023g0062 a0001c0025t0023g0062	1	243	0.0041	20	c.-29 others(35): Show c.-29-180_-29-161dupTCTCTCTCTCTCTCTCTCTC	THBS1	ENSG00000137801.11	transcript	ENST00000260356.6	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr15	TogoVar
THBS4_chr5_80030348_80088287	80080579	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01891.hp2 HG02015.hp1 others(15): Show HG00597.hp2 HG01891.hp2 HG02015.hp1 HG02145.hp1 HG02155.hp1 HG02602.hp2 HG02622.hp1 HG03453.hp1 HG03490.hp2 HG03492.hp1 HG03834.hp2 HG04204.hp2 NA18971.hp2 NA18980.hp2 NA18985.hp1 NA18995.hp2 NA19009.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0003t0001	a0001c0001t0001g0018 a0001c0002t0001g0015 a0001c0002t0001g0037 others(11): Show a0001c0001t0001g0018 a0001c0002t0001g0015 a0001c0002t0001g0037 a0001c0002t0001g0259 a0001c0002t0001g0262 a0001c0002t0001g0279 a0001c0002t0001g0284 a0001c0002t0001g0296 a0001c0002t0001g0311 a0001c0002t0001g0313 a0001c0002t0003g0267 a0001c0003t0001g0164 a0001c0003t0001g0166 a0001c0003t0001g0204	18	135	0.1333	20	c.268 others(37): Show c.2684+508_2684+527dupTTTTTTTTTTTTTTTTTTTT	THBS4	ENSG00000113296.14	transcript	ENST00000350881.6	protein_coding	20/21		INFO_REALIGN_3_PRIME	chr5	TogoVar
THBS4_chr5_80030348_80088287	80088232	T T	TTATATAT others(13): Show TTATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	332	0.0030	20	c.50 others(31): Show c.5091_*5092insTATATATATATATATATATA	THBS4	ENSG00000113296.14	transcript	ENST00000350881.6	protein_coding		4946		chr5	TogoVar
THEM4_chr1_151865866_151914511	151878889	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01109.hp1 HG01175.hp1 others(22): Show HG00738.hp1 HG01109.hp1 HG01175.hp1 HG02132.hp2 HG02145.hp1 HG02451.hp1 HG02486.hp2 HG02723.hp2 HG03516.hp2 NA18944.hp1 NA18949.hp2 NA18953.hp2 NA18956.hp2 NA18959.hp2 NA18965.hp1 NA18967.hp1 NA18971.hp2 NA18992.hp2 NA18993.hp1 NA18997.hp1 NA18997.hp2 NA19010.hp1 NA19056.hp1 NA19066.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0021 a0001c0001t0022 a0001c0001t0029 a0001c0001t0033 a0001c0001t0052	a0001c0001t0002g0041 a0001c0001t0002g0183 a0001c0001t0002g0220 others(21): Show a0001c0001t0002g0041 a0001c0001t0002g0183 a0001c0001t0002g0220 a0001c0001t0002g0229 a0001c0001t0003g0131 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0155 a0001c0001t0003g0174 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0004g0111 a0001c0001t0005g0169 a0001c0001t0005g0209 a0001c0001t0006g0129 a0001c0001t0006g0163 a0001c0001t0011g0210 a0001c0001t0012g0126 a0001c0001t0019g0247 a0001c0001t0021g0141 a0001c0001t0022g0166 a0001c0001t0029g0248 a0001c0001t0033g0124 a0001c0001t0052g0060	25	83	0.3012	20	c.558 others(37): Show c.558-1765_558-1764insGTGTGTGTGTGTGTGTGTGT	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding	4/5			chr1	TogoVar
THEM4_chr1_151865866_151914511	151878891	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0254 a0001c0001t0013g0254	1	47	0.0213	20	c.558 others(37): Show c.558-1786_558-1767dupGTGTGTGTGTGTGTGTGTGT	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding	4/5			chr1	TogoVar
THEM4_chr1_151865866_151914511	151883094	T T	TTTTATTT others(13): Show TTTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0216 a0001c0001t0002g0216	1	47	0.0213	20	c.557 others(37): Show c.557+5159_557+5178dupTAAATAAATAAATAAATAAA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding	4/5			chr1	TogoVar
THEM6_chr8_142722223_142741927	142732161	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02559.hp2 HG06807.hp2 others(3): Show HG01361.hp2 HG02559.hp2 HG06807.hp2 NA18522.hp2 NA18954.hp1 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0013 a0001c0001t0014 others(1): Show a0001c0001t0003 a0001c0001t0013 a0001c0001t0014 a0001c0002t0001	a0001c0001t0003g0038 a0001c0001t0003g0086 a0001c0001t0013g0081 others(2): Show a0001c0001t0003g0038 a0001c0001t0003g0086 a0001c0001t0013g0081 a0001c0001t0014g0200 a0001c0002t0001g0115	6	94	0.0638	20	c.514 others(37): Show c.514-3138_514-3119dupATATATATATATATATATAT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr8	TogoVar
THEM6_chr8_142722223_142741927	142732204	A A	ATATATAT others(13): Show ATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0030 a0001c0002t0009g0030	1	399	0.0025	20	c.514 others(37): Show c.514-3119_514-3118insATATATATATATATATGTAT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr8	TogoVar
THEMIS_chr6_127703200_127906058	127730277	T T	TAAAGAAA others(13): Show TAAAGAAAAGAAAAGAAAAGA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01106.hp2 HG01192.hp2 others(7): Show HG01070.hp1 HG01106.hp2 HG01192.hp2 HG01361.hp2 HG02004.hp1 HG03831.hp1 NA18945.hp1 NA18954.hp2 NA19090.hp2 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0001 a0001c0002t0002 a0001c0003t0001	a0001c0002t0002g0090 a0001c0002t0002g0092 a0001c0002t0002g0093 others(7): Show a0001c0002t0002g0090 a0001c0002t0002g0092 a0001c0002t0002g0093 a0001c0002t0002g0149 a0001c0003t0001g0066 a0001c0003t0001g0156 a0001c0003t0001g0157 a0001c0003t0001g0160 a0001c0003t0001g0161 a0001c0003t0001g0162	10	119	0.0840	20	c.175 others(41): Show c.1759-10474_1759-10455dupTCTTTTCTTTTCTTTTCTTT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127785220	T T	TTATCTAT others(13): Show TTATCTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01175.hp2 HG01943.hp2 others(1): Show HG01070.hp1 HG01175.hp2 HG01943.hp2 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0010 a0002c0001 a0001c0002 a0001c0010 a0002c0001	a0001c0002t0002 a0001c0010t0001 a0002c0001t0001 others(1): Show a0001c0002t0002 a0001c0010t0001 a0002c0001t0001 a0002c0001t0007	a0001c0002t0002g0090 a0001c0010t0001g0085 a0002c0001t0001g0039 others(1): Show a0001c0002t0002g0090 a0001c0010t0001g0085 a0002c0001t0001g0039 a0002c0001t0007g0142	4	51	0.0784	20	c.175 others(41): Show c.1758+27643_1758+27662dupGATAGATAGATAGATAGATA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787803	G G	GTAGATAG others(13): Show GTAGATAGATAGATAGATAGA	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02135.hp1 HG01981.hp2 HG02135.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0064 a0002c0001t0001g0074 a0001c0002t0001g0064 a0002c0001t0001g0074	2	57	0.0351	20	c.175 others(41): Show c.1758+25060_1758+25079dupTCTATCTATCTATCTATCTA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787880	T T	TAGATAGA others(13): Show TAGATAGATAGATAGATATAG	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02004.hp1 HG02896.hp2 others(1): Show HG01106.hp2 HG02004.hp1 HG02896.hp2 NA19079.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0006 a0001c0003t0001 a0001c0002t0006 a0001c0003t0001	a0001c0002t0006g0217 a0001c0003t0001g0155 a0001c0003t0001g0161 others(1): Show a0001c0002t0006g0217 a0001c0003t0001g0155 a0001c0003t0001g0161 a0001c0003t0001g0162	4	62	0.0645	20	c.175 others(41): Show c.1758+25002_1758+25003insCTATATCTATCTATCTATCT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127787880	T T	TAGATAGA others(13): Show TAGATAGATAGATATAGATAG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02145.hp1 HG02630.hp1 others(1): Show HG01243.hp2 HG02145.hp1 HG02630.hp1 NA19090.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0003 a0001c0003t0001 a0001c0003t0003 a0001c0002t0003 a0001c0003t0001 a0001c0003t0003	a0001c0002t0003g0012 a0001c0002t0003g0017 a0001c0003t0001g0066 others(1): Show a0001c0002t0003g0012 a0001c0002t0003g0017 a0001c0003t0001g0066 a0001c0003t0003g0008	4	62	0.0645	20	c.175 others(41): Show c.1758+25002_1758+25003insCTATCTATATCTATCTATCT	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127862428	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01346.hp1 HG02717.hp2 others(4): Show HG00408.hp1 HG01346.hp1 HG02717.hp2 HG03239.hp2 NA18612.hp1 NA18945.hp2 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0001t0001	a0001c0002t0001g0049 a0001c0002t0001g0054 a0001c0002t0001g0080 others(4): Show a0001c0002t0001g0049 a0001c0002t0001g0054 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0083 a0001c0003t0001g0066 a0002c0001t0001g0131	7	61	0.1148	20	c.92- others(35): Show c.92-7260_92-7241dupAAAAAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	1/5			chr6	TogoVar
THNSL1_chr10_25011612_25031664	25027356	T T	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp1 NA18978.hp2 NA18994.hp2 HG00735.hp1 NA18978.hp2 NA18994.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0002 a0003c0005t0002 a0001c0002t0002 a0003c0005t0002	a0001c0002t0002g0039 a0003c0005t0002g0001 a0001c0002t0002g0039 a0003c0005t0002g0001	3	273	0.0110	20	c.19 others(31): Show c.1901_*1902insAAAAAAAAAAAAAAAAAAAA	THNSL1	ENSG00000185875.13	transcript	ENST00000376356.5	protein_coding		693		chr10	TogoVar
THNSL2_chr2_88165346_88191627	88181332	C C	CCTCTCTC others(13): Show CCTCTCTCCTCTCTCTCCTCT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 NA18971.hp2 others(1): Show HG00099.hp1 HG00099.hp2 NA18971.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0012 a0001c0001t0002 a0001c0001t0005 a0001c0001t0012	a0001c0001t0002g0045 a0001c0001t0005g0034 a0001c0001t0005g0035 others(1): Show a0001c0001t0002g0045 a0001c0001t0005g0034 a0001c0001t0005g0035 a0001c0001t0012g0031	4	29	0.1379	20	c.803 others(37): Show c.803-1351_803-1350insCTCTCTCTCTCCTCTCTCTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THOC3_chr5_175954531_175973315	175962421	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03139.hp1 HG03225.hp1 HG01884.hp1 HG03139.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0012 a0001c0001t0003g0012	3	56	0.0536	20	c.630 others(36): Show c.630-1007_630-988dupGTGTGTGTGTGTGTGTGTGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	3/5			chr5	TogoVar
THOC3_chr5_175954531_175973315	175967544	T T	TACCACCA others(13): Show TACCACCACCACCAACGTACC	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0097 a0001c0002t0001g0097	1	70	0.0143	20	c.268 others(35): Show c.268-278_268-277insGGTACGTTGGTGGTGGTGGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	1/5			chr5	TogoVar
THOC3_chr5_175954531_175973315	175967558	T T	TACCACCA others(13): Show TACCACCACCACCAACGTACC	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03139.hp2 HG06807.hp2 HG02818.hp2 HG03139.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0009 a0001c0001t0002g0001 a0001c0001t0001g0009 a0001c0001t0002g0001	3	137	0.0219	20	c.268 others(35): Show c.268-292_268-291insGGTACGTTGGTGGTGGTGGT	THOC3	ENSG00000051596.10	transcript	ENST00000265097.9	protein_coding	1/5			chr5	TogoVar
THRAP3_chr1_36219443_36310357	36220970	A A	AATATATA others(13): Show AATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	242	0.0041	20	c.-36 others(31): Show c.-3670_-3669insATATATATATATATATATAT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding		3472		chr1	TogoVar
THRAP3_chr1_36219443_36310357	36220972	A A	AAAAAAAA others(13): Show AAAAAAAAAAAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0007 a0003c0007t0007	a0003c0007t0007g0064 a0003c0007t0007g0064	1	183	0.0055	20	c.-36 others(31): Show c.-3668_-3667insAAAAAAAAAAAAATATATAT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding		3470		chr1	TogoVar
THRAP3_chr1_36219443_36310357	36253760	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02572.hp1 HG01255.hp2 HG02572.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0008 a0003c0004t0017 a0003c0004t0008 a0003c0004t0017	a0003c0004t0008g0017 a0003c0004t0017g0013 a0003c0004t0008g0017 a0003c0004t0017g0013	2	29	0.0690	20	c.-13 others(39): Show c.-134-5603_-134-5602insTTTTTTTTTTTTTTTTTTTT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36270571	G G	GGTTTTTT others(13): Show GGTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03486.hp1 HG03139.hp2 HG03486.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0014 a0003c0004t0002 a0003c0004t0014	a0003c0004t0002g0002 a0003c0004t0014g0012 a0003c0004t0002g0002 a0003c0004t0014g0012	2	218	0.0092	20	c.-32 others(39): Show c.-32+11087_-32+11088insGTTTTTTTTTTTTTTTTTTT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	2/11			chr1	TogoVar
THRAP3_chr1_36219443_36310357	36293640	C C	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG03491.hp1 HG02148.hp2 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0083 a0001c0001t0010g0217 a0001c0001t0001g0083 a0001c0001t0010g0217	2	12	0.1667	20	c.203 others(37): Show c.2031-191_2031-172dupGTGTGTGTGTGTGTGTGTGT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36295545	T T	TTTCCTTC others(13): Show TTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03139.hp1 HG02970.hp2 HG03139.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0051 a0002c0005t0001g0052 a0002c0005t0001g0051 a0002c0005t0001g0052	2	51	0.0392	20	c.211 others(39): Show c.2116-1025_2116-1006dupTTCCTTCCTTCCTTCCTTCC	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRB_chr3_24112153_24499850	24135846	T T	TATATATA others(13): Show TATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03041.hp1 HG02257.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0014 a0001c0001t0004g0130 a0001c0001t0004g0014 a0001c0001t0004g0130	2	170	0.0118	20	c.739 others(37): Show c.739-2385_739-2384insTTATATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	8/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24135847	A A	ATATATAT others(13): Show ATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0121 a0001c0001t0032g0121	1	77	0.0130	20	c.739 others(37): Show c.739-2386_739-2385insAATATATATATATATATATA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	8/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24168489	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0081 a0001c0001t0008g0081	1	164	0.0061	20	c.284 others(39): Show c.284-16000_284-15999insTATATATATATATATATATA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24188858	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03209.hp1 HG03225.hp2 others(2): Show HG02280.hp1 HG03209.hp1 HG03225.hp2 NA18906.hp1 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0011 a0001c0001t0013 others(1): Show a0001c0001t0006 a0001c0001t0011 a0001c0001t0013 a0001c0002t0056	a0001c0001t0006g0023 a0001c0001t0006g0129 a0001c0001t0011g0002 others(2): Show a0001c0001t0006g0023 a0001c0001t0006g0129 a0001c0001t0011g0002 a0001c0001t0013g0005 a0001c0002t0056g0177	5	54	0.0926	20	c.283 others(37): Show c.283+1196_283+1215dupATATATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24269403	G G	GCGCGCGC others(13): Show GCGCGCGCGCGCGCACACACA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0083 a0001c0001t0008g0083	1	75	0.0133	20	c.-43 others(39): Show c.-43+27822_-43+27823insTGTGTGTGCGCGCGCGCGCG	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	3/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24481229	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03654.hp2 HG03579.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0001 a0001c0001t0018	a0001c0001t0001g0008 a0001c0001t0018g0170 a0001c0001t0001g0008 a0001c0001t0018g0170	2	72	0.0278	20	c.-26 others(41): Show c.-261+13403_-261+13422dupAAAAAAAAAAAAAAAAAAAA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	1/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24482538	C C	CCTCTCTC others(13): Show CCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0175 a0001c0001t0047g0175	1	98	0.0102	20	c.-26 others(41): Show c.-261+12094_-261+12113dupAGAGAGAGAGAGAGAGAGAG	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	1/10			chr3	TogoVar
THSD4_chr15_71110471_71788383	71263331	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG03486.hp2 HG00642.hp2 HG03486.hp2	a0001 a0003 a0001 a0003	a0001c0004 a0003c0010 a0001c0004 a0003c0010	a0001c0004t0005 a0003c0010t0027 a0001c0004t0005 a0003c0010t0027	a0001c0004t0005g0109 a0003c0010t0027g0088 a0001c0004t0005g0109 a0003c0010t0027g0088	2	3	0.6667	20	c.101 others(39): Show c.1015+6632_1015+6633insTATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326694	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0025 a0001c0004t0025	a0001c0004t0025g0069 a0001c0004t0025g0069	1	97	0.0103	20	c.101 others(41): Show c.1015+69980_1015+69981insTATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAAAAAAA others(13): Show AAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	22	0.0455	20	c.101 others(41): Show c.1015+69986_1015+69987insAAAAAAAAAAAATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAAATATA others(13): Show AAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0107 a0002c0005t0004g0107	1	22	0.0455	20	c.101 others(41): Show c.1015+69986_1015+69987insAATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 NA19009.hp1 HG03516.hp1 NA19009.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0006 a0002c0005t0004 a0001c0002t0006 a0002c0005t0004	a0001c0002t0006g0026 a0002c0005t0004g0113 a0001c0002t0006g0026 a0002c0005t0004g0113	2	23	0.0870	20	c.101 others(41): Show c.1015+69992_1015+70011dupATATATATATATATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71332892	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp2 HG01346.hp1 others(12): Show HG01081.hp1 HG01081.hp2 HG01346.hp1 HG01361.hp1 HG01884.hp1 HG02683.hp1 HG02809.hp1 HG02965.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG06807.hp1 NA19009.hp1 NA19009.hp2 NA19043.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0005 a0004c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0011 a0001c0001t0020 a0001c0001t0021 a0001c0001t0034 a0001c0001t0037 a0001c0002t0005 a0001c0002t0006 a0001c0002t0043 a0001c0004t0005 a0001c0004t0029 a0002c0005t0004 a0004c0018t0006	a0001c0001t0001g0033 a0001c0001t0002g0075 a0001c0001t0008g0037 others(12): Show a0001c0001t0001g0033 a0001c0001t0002g0075 a0001c0001t0008g0037 a0001c0001t0011g0094 a0001c0001t0020g0036 a0001c0001t0021g0005 a0001c0001t0034g0006 a0001c0001t0037g0106 a0001c0002t0005g0103 a0001c0002t0006g0026 a0001c0002t0043g0076 a0001c0004t0005g0100 a0001c0004t0029g0086 a0002c0005t0004g0107 a0004c0018t0006g0058	15	18	0.8333	20	c.101 others(41): Show c.1015+76193_1015+76194insTTTTTTTTTTTTTTTTTTTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71365131	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01255.hp2 HG01978.hp2 others(2): Show HG01081.hp2 HG01255.hp2 HG01978.hp2 HG02004.hp2 HG03669.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0004 a0005c0022 a0001c0001 a0001c0004 a0005c0022	a0001c0001t0011 a0001c0001t0036 a0001c0004t0026 others(2): Show a0001c0001t0011 a0001c0001t0036 a0001c0004t0026 a0001c0004t0044 a0005c0022t0032	a0001c0001t0011g0094 a0001c0001t0036g0089 a0001c0004t0026g0061 others(2): Show a0001c0001t0011g0094 a0001c0001t0036g0089 a0001c0004t0026g0061 a0001c0004t0044g0029 a0005c0022t0032g0014	5	23	0.2174	20	c.101 others(41): Show c.1016-46540_1016-46521dupGTGTGTGTGTGTGTGTGTGT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71416695	C C	CATTTCAT others(13): Show CATTTCATTTTATTTTATTTT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0102 a0001c0001t0002g0102	1	106	0.0094	20	c.115 others(39): Show c.1152+4876_1152+4877insCATTTTATTTTATTTTATTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442660	G G	GTATGTAT others(13): Show GTATGTATGTATGTATATATA	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0062 a0001c0004t0007g0062	1	59	0.0169	20	c.115 others(41): Show c.1152+30840_1152+30841insGTATGTATGTATATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442660	G G	GTGTGTGT others(13): Show GTGTGTGTATGTATGTATATA	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0011 a0001c0001t0039g0011	1	59	0.0169	20	c.115 others(41): Show c.1152+30838_1152+30839insGTGTGTATGTATGTATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar

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