Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRPV3_chr17_3505502_3562812	3519422	T T	TTGGATGG others(13): Show TTGGATGGATGGATGGATGGA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp2 HG00423.hp1 others(105): Show HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00741.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01496.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp1 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02083.hp2 HG02109.hp1 HG02148.hp2 HG02293.hp2 HG02300.hp1 HG02523.hp2 HG02809.hp2 HG03139.hp1 HG03195.hp2 HG03490.hp2 HG03516.hp1 HG03669.hp2 HG03688.hp2 HG03710.hp2 HG03834.hp2 HG04204.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18952.hp2 NA18962.hp1 NA18964.hp1 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18989.hp2 NA18990.hp1 NA18993.hp1 NA18995.hp1 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19057.hp1 NA19057.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp2 NA19085.hp2 NA20805.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0007 a0008 a0009 a0010 a0013 a0023	a0001c0001 a0001c0018 a0001c0020 others(22): Show a0001c0001 a0001c0018 a0001c0020 a0001c0024 a0001c0058 a0001c0082 a0001c0108 a0002c0007 a0002c0013 a0002c0036 a0002c0043 a0002c0078 a0002c0098 a0003c0004 a0003c0061 a0003c0086 a0004c0011 a0004c0012 a0004c0042 a0007c0089 a0008c0049 a0009c0076 a0010c0028 a0013c0067 a0023c0054	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(37): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0012 a0001c0001t0014 a0001c0001t0031 a0001c0001t0041 a0001c0018t0006 a0001c0018t0010 a0001c0020t0001 a0001c0020t0002 a0001c0024t0014 a0001c0058t0001 a0001c0082t0001 a0001c0108t0012 a0002c0007t0001 a0002c0007t0014 a0002c0007t0039 a0002c0013t0001 a0002c0013t0005 a0002c0036t0001 a0002c0036t0030 a0002c0043t0001 a0002c0078t0001 a0002c0098t0001 a0003c0004t0001 a0003c0004t0002 a0003c0061t0037 a0003c0086t0001 a0004c0011t0001 a0004c0012t0001 a0004c0042t0001 a0007c0089t0011 a0008c0049t0001 a0009c0076t0001 a0010c0028t0001 a0013c0067t0001 a0023c0054t0001	a0001c0001t0001g0011 a0001c0001t0001g0043 a0001c0001t0001g0051 others(104): Show a0001c0001t0001g0011 a0001c0001t0001g0043 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0106 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0242 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0319 a0001c0001t0001g0336 a0001c0001t0001g0339 a0001c0001t0001g0355 a0001c0001t0002g0250 a0001c0001t0004g0239 a0001c0001t0005g0303 a0001c0001t0009g0032 a0001c0001t0012g0116 a0001c0001t0012g0180 a0001c0001t0012g0229 a0001c0001t0012g0259 a0001c0001t0012g0305 a0001c0001t0014g0200 a0001c0001t0014g0211 a0001c0001t0014g0302 a0001c0001t0014g0389 a0001c0001t0031g0267 a0001c0001t0041g0388 a0001c0018t0006g0153 a0001c0018t0010g0155 a0001c0020t0001g0273 a0001c0020t0001g0323 a0001c0020t0002g0285 a0001c0024t0014g0236 a0001c0058t0001g0031 a0001c0082t0001g0219 a0001c0108t0012g0016 a0002c0007t0001g0127 a0002c0007t0001g0148 a0002c0007t0001g0227 a0002c0007t0001g0329 a0002c0007t0001g0386 a0002c0007t0014g0387 a0002c0007t0014g0391 a0002c0007t0039g0134 a0002c0013t0001g0078 a0002c0013t0001g0231 a0002c0013t0001g0253 a0002c0013t0001g0264 a0002c0013t0001g0269 a0002c0013t0005g0139 a0002c0036t0001g0265 a0002c0036t0030g0209 a0002c0043t0001g0349 a0002c0043t0001g0393 a0002c0078t0001g0364 a0002c0098t0001g0309 a0003c0004t0001g0055 a0003c0004t0001g0058 a0003c0004t0001g0060 a0003c0004t0001g0061 a0003c0004t0001g0062 a0003c0004t0001g0063 a0003c0004t0001g0073 a0003c0004t0001g0089 a0003c0004t0001g0093 a0003c0004t0001g0097 a0003c0004t0001g0098 a0003c0004t0001g0103 a0003c0004t0001g0105 a0003c0004t0001g0108 a0003c0004t0001g0110 a0003c0004t0001g0112 a0003c0004t0001g0115 a0003c0004t0001g0149 a0003c0004t0001g0241 a0003c0004t0001g0290 a0003c0004t0001g0318 a0003c0004t0001g0322 a0003c0004t0001g0337 a0003c0004t0001g0369 a0003c0004t0001g0399 a0003c0004t0002g0230 a0003c0061t0037g0220 a0003c0086t0001g0028 a0004c0011t0001g0327 a0004c0011t0001g0342 a0004c0011t0001g0352 a0004c0011t0001g0356 a0004c0012t0001g0003 a0004c0012t0001g0071 a0004c0012t0001g0076 a0004c0012t0001g0256 a0004c0042t0001g0135 a0004c0042t0001g0324 a0007c0089t0011g0126 a0008c0049t0001g0185 a0009c0076t0001g0140 a0010c0028t0001g0346 a0010c0028t0001g0382 a0010c0028t0001g0384 a0013c0067t0001g0368 a0023c0054t0001g0214	108	232	0.4655	20	c.181 others(37): Show c.1811-592_1811-573dupTCCATCCATCCATCCATCCA	TRPV3	ENSG00000167723.15	transcript	ENST00000576742.6	protein_coding	14/17			chr17	TogoVar
TRPV3_chr17_3505502_3562812	3540092	T T	TAAATAAA others(13): Show TAAATAAATAAATAAATAAAC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp2 HG02559.hp2 HG03130.hp2	a0009 a0017 a0009 a0017	a0009c0026 a0017c0081 a0009c0026 a0017c0081	a0009c0026t0036 a0017c0081t0003 a0009c0026t0036 a0017c0081t0003	a0009c0026t0036g0373 a0017c0081t0003g0298 a0009c0026t0036g0373 a0017c0081t0003g0298	2	267	0.0075	20	c.643 others(37): Show c.643+2429_643+2430insGTTTATTTATTTATTTATTT	TRPV3	ENSG00000167723.15	transcript	ENST00000576742.6	protein_coding	6/17			chr17	TogoVar
TRRAP_chr7_98873532_99018241	98992560	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0013 a0001c0011t0013	a0001c0011t0013g0190 a0001c0011t0013g0190	1	139	0.0072	20	c.984 others(37): Show c.9847+342_9847+361dupGTGTGTGTGTGTGTGTGTGT	TRRAP	ENSG00000196367.15	transcript	ENST00000456197.2	protein_coding	65/72		INFO_REALIGN_3_PRIME	chr7	TogoVar
TSBP1_chr6_32287698_32376903	32367243	A A	AAGAGAGA others(13): Show AAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01069.hp1 HG01255.hp1 HG00738.hp1 HG01069.hp1 HG01255.hp1	a0006 a0010 a0006 a0010	a0006c0006 a0010c0010 a0006c0006 a0010c0010	a0006c0006t0003 a0010c0010t0010 a0006c0006t0003 a0010c0010t0010	a0006c0006t0003g0286 a0006c0006t0003g0314 a0010c0010t0010g0344 a0006c0006t0003g0286 a0006c0006t0003g0314 a0010c0010t0010g0344	3	52	0.0577	20	c.166 others(35): Show c.166+662_166+681dupCTCTCTCTCTCTCTCTCTCT	TSBP1	ENSG00000204296.13	transcript	ENST00000533191.6	protein_coding	4/25			chr6	TogoVar
TSBP1_chr6_32287698_32376903	32369373	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02132.hp2 NA18946.hp2 NA18951.hp1 others(7): Show HG02132.hp2 NA18946.hp2 NA18951.hp1 NA18960.hp1 NA18961.hp2 NA18972.hp1 NA18977.hp2 NA18979.hp1 NA19067.hp2 NA19091.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0009 a0002c0002t0001 a0002c0002t0003 a0002c0002t0009	a0002c0002t0001g0149 a0002c0002t0003g0318 a0002c0002t0009g0031 others(7): Show a0002c0002t0001g0149 a0002c0002t0003g0318 a0002c0002t0009g0031 a0002c0002t0009g0032 a0002c0002t0009g0033 a0002c0002t0009g0034 a0002c0002t0009g0035 a0002c0002t0009g0038 a0002c0002t0009g0039 a0002c0002t0009g0040	10	41	0.2439	20	c.100 others(35): Show c.100+523_100+524insAAAAAAAAAAAAAAAAAAAA	TSBP1	ENSG00000204296.13	transcript	ENST00000533191.6	protein_coding	2/25			chr6	TogoVar
TSBP1_chr6_32287698_32376903	32370407	G G	GTGTGTGT others(13): Show GTGTGTGTGTATATATATATA	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0361 a0001c0001t0006g0361	1	92	0.0109	20	c.14- others(33): Show c.14-425_14-424insTATATATATATACACACACA	TSBP1	ENSG00000204296.13	transcript	ENST00000533191.6	protein_coding	1/25			chr6	TogoVar
TSC22D1_chr13_44427143_44581330	44517761	G G	GTATATAC others(13): Show GTATATACATATATACACATA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02976.hp1 HG02280.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0020 a0001c0001t0012g0185 a0001c0001t0001g0020 a0001c0001t0012g0185	2	148	0.0135	20	c.291 others(41): Show c.2912+55401_2912+55402insTATGTGTATATATGTATATA	TSC22D1	ENSG00000102804.16	transcript	ENST00000458659.3	protein_coding	1/2			chr13	TogoVar
TSC22D1_chr13_44427143_44581330	44517829	G G	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0002 a0006c0009t0002	a0006c0009t0002g0014 a0006c0009t0002g0014	1	157	0.0064	20	c.291 others(41): Show c.2912+55333_2912+55334insTATATATATATATATACACA	TSC22D1	ENSG00000102804.16	transcript	ENST00000458659.3	protein_coding	1/2			chr13	TogoVar
TSC22D1_chr13_44427143_44581330	44517857	A A	ATATATAT others(13): Show ATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02647.hp2 HG02080.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0188 a0001c0001t0001g0019 a0001c0001t0001g0188	2	95	0.0211	20	c.291 others(41): Show c.2912+55305_2912+55306insAAAAAAAAAAAATATATATA	TSC22D1	ENSG00000102804.16	transcript	ENST00000458659.3	protein_coding	1/2			chr13	TogoVar
TSC22D1_chr13_44427143_44581330	44546749	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02976.hp1 HG00733.hp1 HG02976.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0012 a0003c0004t0007 a0001c0001t0012 a0003c0004t0007	a0001c0001t0012g0185 a0003c0004t0007g0227 a0001c0001t0012g0185 a0003c0004t0007g0227	2	3	0.6667	20	c.291 others(41): Show c.2912+26394_2912+26413dupACACACACACACACACACAC	TSC22D1	ENSG00000102804.16	transcript	ENST00000458659.3	protein_coding	1/2			chr13	TogoVar
TSC22D2_chr3_150403298_150471422	150460721	G G	GCTGTGCC others(13): Show GCTGTGCCCCTCCAGTGCTAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp2 HG00609.hp2 HG00735.hp1 others(24): Show HG00140.hp2 HG00609.hp2 HG00735.hp1 HG01109.hp2 HG01168.hp2 HG01261.hp1 HG01433.hp1 HG01496.hp1 HG02055.hp1 HG02602.hp1 HG02698.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03490.hp1 HG03579.hp2 HG03831.hp2 HG03927.hp2 HG04184.hp1 HG04228.hp2 NA18747.hp1 NA18949.hp1 NA18951.hp1 NA19009.hp2 NA19085.hp1 NA19088.hp1 NA20905.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0014 a0001c0003 a0001c0005 a0001c0014	a0001c0003t0004 a0001c0003t0026 a0001c0003t0040 others(5): Show a0001c0003t0004 a0001c0003t0026 a0001c0003t0040 a0001c0003t0041 a0001c0003t0104 a0001c0003t0105 a0001c0005t0082 a0001c0014t0026	a0001c0003t0004g0006 a0001c0003t0004g0037 a0001c0003t0004g0154 others(18): Show a0001c0003t0004g0006 a0001c0003t0004g0037 a0001c0003t0004g0154 a0001c0003t0004g0155 a0001c0003t0004g0156 a0001c0003t0004g0157 a0001c0003t0004g0158 a0001c0003t0004g0159 a0001c0003t0004g0160 a0001c0003t0004g0163 a0001c0003t0004g0164 a0001c0003t0004g0165 a0001c0003t0026g0032 a0001c0003t0026g0143 a0001c0003t0040g0142 a0001c0003t0040g0144 a0001c0003t0041g0036 a0001c0003t0104g0006 a0001c0003t0105g0006 a0001c0005t0082g0167 a0001c0014t0026g0166	27	402	0.0672	20	c.20 others(31): Show c.2091_*2110dupCCCCTCCAGTGCTAACTGTG	TSC22D2	ENSG00000196428.13	transcript	ENST00000688009.1	protein_coding	3/3	2111	INFO_REALIGN_3_PRIME	chr3	TogoVar
TSC22D4_chr7_100461519_100484214	100478350	A A	AGAGTGTG others(13): Show AGAGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	89	0.0112	20	c.-26 others(35): Show c.-269-44_-269-43insACACACACACACACACACTC	TSC22D4	ENSG00000166925.9	transcript	ENST00000300181.7	protein_coding	1/4			chr7	TogoVar
TSEN15_chr1_184046730_184079212	184071950	C C	CCCACCCC others(13): Show CCCACCCCACAACAGGCCCTG	intron_variant intron_variant	MODIFIER	NA19055.hp2 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	420	0.0024	20	c.354 others(35): Show c.354-207_354-206insCCACCCCACAACAGGCCCTG	TSEN15	ENSG00000198860.14	transcript	ENST00000645668.2	protein_coding	3/4			chr1	TogoVar
TSEN2_chr3_12479480_12538658	12480528	G G	GGTTTTTT others(13): Show GGTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0004 a0004	a0004c0009 a0004c0009	a0004c0009t0009 a0004c0009t0009	a0004c0009t0009g0044 a0004c0009t0009g0044	1	137	0.0073	20	c.-43 others(31): Show c.-4370_-4369insGTTTTTTTTTTTTTTTTTTT	TSEN2	ENSG00000154743.19	transcript	ENST00000284995.11	protein_coding		3951		chr3	TogoVar
TSEN2_chr3_12479480_12538658	12522363	A A	ATGTACAA others(13): Show ATGTACAATTAATACATTAAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA18949.hp1 HG02280.hp2 NA18949.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0002 a0001c0007t0004 a0001c0001t0002 a0001c0007t0004	a0001c0001t0002g0073 a0001c0007t0004g0050 a0001c0001t0002g0073 a0001c0007t0004g0050	2	282	0.0071	20	c.109 others(39): Show c.1099+3179_1099+3198dupACATTAATTGTACAATTAAT	TSEN2	ENSG00000154743.19	transcript	ENST00000284995.11	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
TSEN2_chr3_12479480_12538658	12523526	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02886.hp2 HG03831.hp2 HG02559.hp1 HG02886.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0018 a0001c0001t0002 a0001c0001t0018	a0001c0001t0002g0062 a0001c0001t0002g0100 a0001c0001t0018g0064 a0001c0001t0002g0062 a0001c0001t0002g0100 a0001c0001t0018g0064	3	113	0.0265	20	c.109 others(39): Show c.1099+4335_1099+4354dupTTTTTTTTTTTTTTTTTTTT	TSEN2	ENSG00000154743.19	transcript	ENST00000284995.11	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
TSEN34_chr19_54186308_54199532	54188015	C C	CAAAAAGA others(13): Show CAAAAAGAAAGAAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG03486.hp1 HG02258.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0004 a0001c0001t0008g0031 a0001c0001t0008g0004 a0001c0001t0008g0031	2	257	0.0078	20	c.-33 others(31): Show c.-3350_-3349insAAAAAGAAAGAAAGAAAGAA	TSEN34	ENSG00000170892.13	transcript	ENST00000396388.3	protein_coding		3292		chr19	TogoVar
TSEN34_chr19_54186308_54199532	54188015	C C	CAGAAAGA others(13): Show CAGAAAGAAAGAAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp1 NA19012.hp1 HG01074.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	2	257	0.0078	20	c.-33 others(31): Show c.-3350_-3349insAGAAAGAAAGAAAGAAAGAA	TSEN34	ENSG00000170892.13	transcript	ENST00000396388.3	protein_coding		3292		chr19	TogoVar
TSEN54_chr17_75511528_75529735	75519369	T T	TATGCTTA others(13): Show TATGCTTAAATGAAGGACTGG	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0075 a0002c0002t0001g0075	1	422	0.0024	20	c.521 others(35): Show c.521+323_521+342dupATGCTTAAATGAAGGACTGG	TSEN54	ENSG00000182173.14	transcript	ENST00000333213.11	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
TSG101_chr11_18475311_18531942	18499381	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	379	0.0026	20	c.640 others(37): Show c.640+3085_640+3104dupATATATATATATATATATAT	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(13): Show ATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0373 a0001c0001t0001g0373	1	27	0.0370	20	c.640 others(37): Show c.640+3083_640+3084insAATATATATATATATATATA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(13): Show ATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02040.hp1 HG02135.hp2 HG00438.hp2 HG02040.hp1 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0041 a0001c0001t0001g0048 a0001c0001t0001g0030 a0001c0001t0001g0041 a0001c0001t0001g0048	3	29	0.1034	20	c.640 others(37): Show c.640+3083_640+3084insAAAATATATATATATATATA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(13): Show ATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	27	0.0370	20	c.640 others(37): Show c.640+3083_640+3084insAAAAAAAATATATATATATA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(13): Show ATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG04115.hp2 HG00597.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0075 a0001c0001t0001g0058 a0001c0001t0001g0075	2	28	0.0714	20	c.640 others(37): Show c.640+3083_640+3084insAAAAAAAAAATATATATATA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSGA10_chr2_98992261_99159942	99069635	C C	CAATAAAT others(13): Show CAATAAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG03017.hp1 HG01361.hp2 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0227 a0001c0001t0002g0239 a0001c0001t0002g0227 a0001c0001t0002g0239	2	135	0.0148	20	c.110 others(37): Show c.1108-657_1108-638dupTATTTATTTATTTATTTATT	TSGA10	ENSG00000135951.16	transcript	ENST00000393483.8	protein_coding	14/20			chr2	TogoVar
TSGA10_chr2_98992261_99159942	99074351	C C	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01943.hp2 HG01993.hp1 others(11): Show HG01167.hp1 HG01943.hp2 HG01993.hp1 HG02080.hp2 HG02273.hp2 HG02293.hp1 HG04184.hp1 NA18612.hp2 NA18957.hp2 NA19002.hp2 NA19054.hp1 NA19084.hp1 NA19089.hp1 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0002c0002t0003 a0001c0001t0003 a0002c0002t0003	a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 others(11): Show a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0164 a0001c0001t0003g0166 a0001c0001t0003g0169 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0184 a0001c0001t0003g0187 a0001c0001t0003g0201 a0001c0001t0003g0206 a0001c0001t0003g0213 a0002c0002t0003g0208	14	139	0.1007	20	c.883 others(37): Show c.883-1298_883-1279dupACACACACACACACACACAC	TSGA10	ENSG00000135951.16	transcript	ENST00000393483.8	protein_coding	12/20			chr2	TogoVar
TSGA13_chr7_130663643_130691545	130690395	T T	TTTCTTTC others(13): Show TTTCTTTCTTTCTTTCCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	354	0.0028	20	c.-42 others(31): Show c.-4285_-4284insGGAAGGAAAGAAAGAAAGAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3851		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690399	C C	CTTCCTTC others(13): Show CTTCCTTCCTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	188	0.0053	20	c.-42 others(31): Show c.-4289_-4288insAGAAAGAAAGAAGGAAGGAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3855		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690399	C C	CTTCTTTC others(13): Show CTTCTTTCTTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	188	0.0053	20	c.-42 others(31): Show c.-4289_-4288insAGAAAGAAAGAAAGAAAGAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3855		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690447	T T	TTTCTTTC others(13): Show TTTCTTTCTTTCTTTCTTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	368	0.0027	20	c.-43 others(31): Show c.-4337_-4336insGGAAAGAAAGAAAGAAAGAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3903		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690451	T T	TTTCTTTC others(13): Show TTTCTTTCTTTCTTTCTTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	375	0.0027	20	c.-43 others(31): Show c.-4341_-4340insGGAAAGAAAGAAAGAAAGAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3907		chr7	TogoVar
TSHB_chr1_115024826_115039302	115026279	G G	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00639.hp1 others(59): Show HG00140.hp1 HG00280.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01928.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02056.hp1 HG02273.hp2 HG02647.hp2 HG03540.hp2 HG04199.hp1 HG04199.hp2 NA18940.hp1 NA18941.hp1 NA18945.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp2 NA18954.hp2 NA18962.hp2 NA18968.hp1 NA18968.hp2 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18994.hp1 NA18995.hp2 NA18999.hp2 NA19000.hp1 NA19006.hp2 NA19007.hp1 NA19009.hp1 NA19011.hp2 NA19059.hp1 NA19064.hp2 NA19066.hp2 NA19077.hp1 NA19078.hp1 NA19082.hp1 NA19082.hp2 NA20129.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0040 a0001c0001t0001g0042	62	84	0.7381	20	c.-35 others(31): Show c.-3583_-3582insTTTTTTTTTTTTTTTTTTTT	TSHB	ENSG00000134200.4	transcript	ENST00000256592.3	protein_coding		3546		chr1	TogoVar
TSHR_chr14_80950621_81151306	80973403	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01099.hp1 HG01169.hp2 others(3): Show HG00438.hp1 HG01099.hp1 HG01169.hp2 HG02965.hp1 HG03041.hp2 NA18975.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0002 a0001c0002t0019 a0002c0003t0003	a0001c0001t0001g0225 a0001c0001t0002g0227 a0001c0001t0004g0226 others(3): Show a0001c0001t0001g0225 a0001c0001t0002g0227 a0001c0001t0004g0226 a0001c0002t0002g0228 a0001c0002t0019g0229 a0002c0003t0003g0203	6	31	0.1935	20	c.170 others(39): Show c.170+17560_170+17579dupAAAAAAAAAAAAAAAAAAAA	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHR_chr14_80950621_81151306	81067481	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03516.hp2 NA18906.hp2 HG03516.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0236 a0001c0001t0016g0242 a0001c0001t0001g0236 a0001c0001t0016g0242	2	260	0.0077	20	c.243 others(35): Show c.243-772_243-771insATATATATATATATATATAT	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHR_chr14_80950621_81151306	81067483	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02895.hp2 HG02698.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0065 a0001c0002t0005g0106 a0001c0002t0005g0065 a0001c0002t0005g0106	2	11	0.1818	20	c.243 others(35): Show c.243-768_243-749dupTATATATATATATATATATA	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHR_chr14_80950621_81151306	81067927	C C	CTATATAT others(13): Show CTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp1 HG02559.hp1 others(4): Show HG01257.hp1 HG01258.hp1 HG02559.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG03471.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0001c0002 a0004c0007 others(1): Show a0001c0001 a0001c0002 a0004c0007 a0005c0011	a0001c0001t0005 a0001c0002t0004 a0001c0002t0005 others(2): Show a0001c0001t0005 a0001c0002t0004 a0001c0002t0005 a0004c0007t0007 a0005c0011t0003	a0001c0001t0005g0135 a0001c0001t0005g0248 a0001c0002t0004g0154 others(4): Show a0001c0001t0005g0135 a0001c0001t0005g0248 a0001c0002t0004g0154 a0001c0002t0004g0155 a0001c0002t0005g0121 a0004c0007t0007g0081 a0005c0011t0003g0109	7	48	0.1458	20	c.243 others(35): Show c.243-319_243-300dupATATATATATATATATATAT	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHR_chr14_80950621_81151306	81094679	A A	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0044 a0002c0003t0003g0044	1	2	0.5000	20	c.546 others(37): Show c.546-1955_546-1936dupTTTTTTTTTTTTTTTTTTTT	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHR_chr14_80950621_81151306	81096923	G G	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02809.hp1 HG02922.hp1 others(4): Show HG01884.hp1 HG02809.hp1 HG02922.hp1 HG02965.hp2 HG03098.hp2 HG03195.hp1 HG03579.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0002c0003 a0004c0007 a0001c0002 a0002c0003 a0004c0007	a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 others(2): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0002c0003t0003 a0004c0007t0007	a0001c0002t0001g0095 a0001c0002t0003g0059 a0001c0002t0003g0247 others(4): Show a0001c0002t0001g0095 a0001c0002t0003g0059 a0001c0002t0003g0247 a0001c0002t0005g0252 a0002c0003t0003g0085 a0002c0003t0003g0086 a0004c0007t0007g0090	7	64	0.1094	20	c.614 others(35): Show c.614+227_614+246dupGTGTGTGTGTGTGTGTGTGT	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHZ1_chr18_75205797_75294944	75246403	G G	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01978.hp1 HG02004.hp2 others(18): Show HG01099.hp2 HG01978.hp1 HG02004.hp2 HG02056.hp1 HG02109.hp2 HG02135.hp1 HG02293.hp2 HG02615.hp1 HG02698.hp1 HG02922.hp1 HG03139.hp2 HG03225.hp2 HG03654.hp1 HG03654.hp2 HG04228.hp1 NA18962.hp1 NA18978.hp2 NA18980.hp2 NA19000.hp1 NA19064.hp1 NA19074.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0005 others(5): Show a0001c0001 a0001c0004 a0001c0005 a0001c0021 a0001c0022 a0002c0002 a0002c0003 a0003c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0013 a0001c0001t0014 a0001c0004t0028 a0001c0005t0015 a0001c0021t0006 a0001c0022t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0012 a0002c0003t0002 a0003c0007t0002	a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0245 others(18): Show a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0245 a0001c0001t0001g0292 a0001c0001t0002g0082 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0003g0059 a0001c0001t0005g0283 a0001c0001t0013g0038 a0001c0001t0014g0067 a0001c0004t0028g0099 a0001c0005t0015g0300 a0001c0021t0006g0125 a0001c0022t0001g0076 a0002c0002t0001g0255 a0002c0002t0002g0084 a0002c0002t0002g0109 a0002c0002t0012g0101 a0002c0003t0002g0203 a0003c0007t0002g0298	21	28	0.7500	20	c.40+ others(37): Show c.40+34510_40+34529dupGTGTGTGTGTGTGTGTGTGT	TSHZ1	ENSG00000179981.11	transcript	ENST00000580243.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr18	TogoVar
TSHZ2_chr20_52967358_53500330	52999093	T T	TACTCTTC others(13): Show TACTCTTCACTGCCACATTCC	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG03041.hp2 HG00673.hp2 HG03041.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0051 a0004c0004t0005 a0001c0001t0051 a0004c0004t0005	a0001c0001t0051g0026 a0004c0004t0005g0024 a0001c0001t0051g0026 a0004c0004t0005g0024	2	111	0.0180	20	c.40+ others(37): Show c.40+25782_40+25801dupCTCTTCACTGCCACATTCCA	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53001210	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0009 a0001c0001t0014g0009	1	174	0.0057	20	c.40+ others(37): Show c.40+27896_40+27897insATGTGTGTGTGTGTGTGTGT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53001212	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0019 a0002c0003t0005g0019	1	174	0.0057	20	c.40+ others(37): Show c.40+27898_40+27899insATGTGTGTGTGTGTGTGTGT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53001218	G G	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTATA	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02109.hp1 HG02809.hp1 others(1): Show HG01106.hp2 HG02109.hp1 HG02809.hp1 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0011 a0001c0001 a0001c0011	a0001c0001t0014 a0001c0001t0041 a0001c0001t0067 others(1): Show a0001c0001t0014 a0001c0001t0041 a0001c0001t0067 a0001c0011t0035	a0001c0001t0014g0004 a0001c0001t0041g0092 a0001c0001t0067g0033 others(1): Show a0001c0001t0014g0004 a0001c0001t0041g0092 a0001c0001t0067g0033 a0001c0011t0035g0174	4	171	0.0234	20	c.40+ others(37): Show c.40+27902_40+27903insATATGTGTGTGTGTGTGTGT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53008980	C C	CCTCTCTC others(13): Show CCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0025 a0001c0016t0025	a0001c0016t0025g0135 a0001c0016t0025g0135	1	24	0.0417	20	c.40+ others(37): Show c.40+35679_40+35698dupTCTCTCTCTCTCTCTCTCTC	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53050103	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03195.hp2 NA19240.hp2 HG02886.hp1 HG03195.hp2 NA19240.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0010 a0001c0001 a0006c0010	a0001c0001t0001 a0001c0001t0011 a0006c0010t0033 a0001c0001t0001 a0001c0001t0011 a0006c0010t0033	a0001c0001t0001g0148 a0001c0001t0011g0146 a0006c0010t0033g0138 a0001c0001t0001g0148 a0001c0001t0011g0146 a0006c0010t0033g0138	3	52	0.0577	20	c.40+ others(37): Show c.40+76773_40+76792dupTATATATATATATATATATA	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53050130	T T	TATATATA others(13): Show TATATATATATATACATATAC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02622.hp2 HG02886.hp2 others(3): Show HG02572.hp2 HG02622.hp2 HG02886.hp2 HG02897.hp1 HG02976.hp1 HG04115.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0003 a0001c0001 a0001c0009 a0002c0003	a0001c0001t0001 a0001c0001t0037 a0001c0009t0036 others(3): Show a0001c0001t0001 a0001c0001t0037 a0001c0009t0036 a0002c0003t0038 a0002c0003t0044 a0002c0003t0048	a0001c0001t0001g0055 a0001c0001t0037g0030 a0001c0009t0036g0029 others(3): Show a0001c0001t0001g0055 a0001c0001t0037g0030 a0001c0009t0036g0029 a0002c0003t0038g0031 a0002c0003t0044g0101 a0002c0003t0048g0002	6	131	0.0458	20	c.40+ others(37): Show c.40+76805_40+76806insATATACATATACATATATAT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53182234	C C	CTCCTTCC others(13): Show CTCCTTCCTTCCTTCTTTCCG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0128 a0001c0001t0003g0128	1	89	0.0112	20	c.41- others(37): Show c.41-71250_41-71249insTTCCGTCCTTCCTTCCTTCT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53182234	C C	CTCCTTCC others(13): Show CTCCTTCCTTCCTTCTTTCCT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00544.hp1 HG00544.hp2 others(80): Show HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00621.hp1 HG00621.hp2 HG00673.hp2 HG00741.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp2 HG01496.hp1 HG01928.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02109.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp2 HG02647.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp2 HG03688.hp2 HG03704.hp2 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 NA18940.hp1 NA18940.hp2 NA18948.hp1 NA18948.hp2 NA18954.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19030.hp1 NA19056.hp2 NA19057.hp1 NA19063.hp2 NA19077.hp1 NA19077.hp2 NA19085.hp1 NA19085.hp2 NA19090.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0007	a0001c0001 a0001c0002 a0001c0009 others(9): Show a0001c0001 a0001c0002 a0001c0009 a0001c0011 a0001c0012 a0001c0013 a0001c0017 a0002c0003 a0003c0006 a0004c0004 a0005c0007 a0007c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(52): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0029 a0001c0001t0042 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0060 a0001c0001t0068 a0001c0001t0072 a0001c0001t0076 a0001c0001t0078 a0001c0001t0083 a0001c0001t0084 a0001c0001t0087 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0013 a0001c0002t0028 a0001c0002t0057 a0001c0002t0086 a0001c0002t0089 a0001c0009t0030 a0001c0011t0035 a0001c0011t0079 a0001c0012t0008 a0001c0013t0008 a0001c0017t0006 a0002c0003t0005 a0002c0003t0038 a0002c0003t0058 a0003c0006t0015 a0004c0004t0005 a0004c0004t0055 a0005c0007t0001 a0007c0008t0066	a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0064 others(80): Show a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0001g0105 a0001c0001t0001g0152 a0001c0001t0001g0159 a0001c0001t0002g0089 a0001c0001t0002g0115 a0001c0001t0002g0117 a0001c0001t0002g0141 a0001c0001t0003g0090 a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0070 a0001c0001t0004g0075 a0001c0001t0004g0110 a0001c0001t0004g0113 a0001c0001t0004g0119 a0001c0001t0005g0130 a0001c0001t0005g0158 a0001c0001t0007g0046 a0001c0001t0007g0060 a0001c0001t0007g0167 a0001c0001t0008g0082 a0001c0001t0009g0124 a0001c0001t0009g0131 a0001c0001t0009g0166 a0001c0001t0012g0111 a0001c0001t0013g0038 a0001c0001t0014g0004 a0001c0001t0014g0009 a0001c0001t0016g0010 a0001c0001t0016g0015 a0001c0001t0017g0083 a0001c0001t0020g0132 a0001c0001t0020g0163 a0001c0001t0022g0145 a0001c0001t0023g0104 a0001c0001t0023g0116 a0001c0001t0029g0094 a0001c0001t0042g0076 a0001c0001t0049g0011 a0001c0001t0050g0012 a0001c0001t0051g0026 a0001c0001t0060g0022 a0001c0001t0068g0080 a0001c0001t0072g0106 a0001c0001t0076g0155 a0001c0001t0078g0085 a0001c0001t0083g0125 a0001c0001t0084g0073 a0001c0001t0087g0156 a0001c0002t0001g0133 a0001c0002t0002g0042 a0001c0002t0002g0063 a0001c0002t0002g0107 a0001c0002t0002g0121 a0001c0002t0003g0061 a0001c0002t0005g0005 a0001c0002t0005g0017 a0001c0002t0006g0114 a0001c0002t0007g0103 a0001c0002t0008g0140 a0001c0002t0013g0050 a0001c0002t0028g0095 a0001c0002t0057g0016 a0001c0002t0086g0112 a0001c0002t0089g0165 a0001c0009t0030g0136 a0001c0011t0035g0174 a0001c0011t0079g0032 a0001c0012t0008g0096 a0001c0013t0008g0161 a0001c0017t0006g0164 a0002c0003t0005g0014 a0002c0003t0038g0031 a0002c0003t0058g0006 a0003c0006t0015g0020 a0004c0004t0005g0024 a0004c0004t0055g0003 a0005c0007t0001g0126 a0005c0007t0001g0127 a0007c0008t0066g0109	83	171	0.4854	20	c.41- others(37): Show c.41-71250_41-71249insTTCCTTCCTTCCTTCCTTCT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53190086	A A	AATATATA others(13): Show AATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02897.hp2 HG02683.hp2 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0082 a0001c0001t0002 a0002c0003t0082	a0001c0001t0002g0170 a0002c0003t0082g0047 a0001c0001t0002g0170 a0002c0003t0082g0047	2	34	0.0588	20	c.41- others(37): Show c.41-63380_41-63361dupATATATATATATATATATAT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53246040	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02809.hp2 HG02922.hp1 others(1): Show HG01891.hp1 HG02809.hp2 HG02922.hp1 HG03041.hp2	a0003 a0004 a0003 a0004	a0003c0006 a0004c0004 a0003c0006 a0004c0004	a0003c0006t0015 a0004c0004t0005 a0004c0004t0055 a0003c0006t0015 a0004c0004t0005 a0004c0004t0055	a0003c0006t0015g0008 a0003c0006t0015g0020 a0004c0004t0005g0024 others(1): Show a0003c0006t0015g0008 a0003c0006t0015g0020 a0004c0004t0005g0024 a0004c0004t0055g0003	4	106	0.0377	20	c.41- others(35): Show c.41-7446_41-7445insTTTTTTTTTTTTTTTTTTTT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar

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