Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRAPPC9_chr8_139722725_140462744	140157347	G G	GAAGCCTC others(14): Show GAAGCCTCCCTTTTCCATTCAA	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0001 a0001c0018t0001	a0001c0018t0001g0096 a0001c0018t0001g0096	1	64	0.0156	21	c.255 others(42): Show c.2556+64111_2556+64112insTTGAATGGAAAAGGGAGGCTT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140157368	G G	GAAGCCTC others(14): Show GAAGCCTCCCTTTTCCATTCAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp2 HG01071.hp1 others(4): Show HG01070.hp1 HG01070.hp2 HG01071.hp1 HG02809.hp2 HG02886.hp1 HG04115.hp2 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0002 a0001c0002t0022 a0001c0004t0001 others(1): Show a0001c0002t0002 a0001c0002t0022 a0001c0004t0001 a0001c0004t0004	a0001c0002t0002g0001 a0001c0002t0002g0009 a0001c0002t0002g0013 others(4): Show a0001c0002t0002g0001 a0001c0002t0002g0009 a0001c0002t0002g0013 a0001c0002t0002g0039 a0001c0002t0022g0006 a0001c0004t0001g0088 a0001c0004t0004g0087	7	34	0.2059	21	c.255 others(42): Show c.2556+64070_2556+64090dupTTGAATGGAAAAGGGAGGCTT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140157389	A A	AAAGCCTC others(14): Show AAAGCCTCCCTTTTCCATTCAG	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0061 a0001c0001t0024g0061	1	96	0.0104	21	c.255 others(42): Show c.2556+64069_2556+64070insCTGAATGGAAAAGGGAGGCTT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140272116	A A	AATGGTGA others(14): Show AATGGTGATGGTGGCGATGGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG04115.hp1 HG00140.hp2 HG00738.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0060 a0001c0002t0002g0003 a0001c0002t0002g0050 a0001c0001t0001g0060 a0001c0002t0002g0003 a0001c0002t0002g0050	3	63	0.0476	21	c.227 others(40): Show c.2278+3521_2278+3541dupCACCATCGCCACCATCACCAT	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	15/22			chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140458378	T T	TGTGACCC others(14): Show TGTGACCCTCACGGTACCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	95	0.0105	21	c.-77 others(30): Show c.-771_-751dupGGGGGGTACCGTGAGGGTCAC	TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding		635		chr8	TogoVar
TRARG1_chr17_1274662_1305978	1286473	G G	GTTATCAG others(14): Show GTTATCAGCCTGTGGGGTGTTT	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0122 a0001c0001t0010g0122	1	399	0.0025	21	c.387 others(38): Show c.387+6106_387+6126dupTTTATCAGCCTGTGGGGTGTT	TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr17	TogoVar
TRAT1_chr3_108817786_108860005	108844843	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0156 a0001c0001t0006g0156	1	206	0.0049	21	c.153 others(38): Show c.153-2219_153-2199dupAAAAAAAAAAAAAAAAAAAAA	TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TREM2_chr6_41153508_41168116	41155375	T T	TCTCTCTC others(14): Show TCTCTCTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	60	0.0167	21	c.33 others(32): Show c.3388_*3389insGAGAGAGAGAGAGAGAGAGAG	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		3132		chr6	TogoVar
TREM2_chr6_41153508_41168116	41165455	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	34	0.0294	21	c.-23 others(32): Show c.-2374_-2373insAAAAAAAAAAAAAAAAAAAAA	TREM2	ENSG00000095970.17	transcript	ENST00000373113.8	protein_coding		2340		chr6	TogoVar
TREML1_chr6_41144337_41159347	41155375	T T	TCTCTCTC others(14): Show TCTCTCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	53	0.0189	21	c.-10 others(32): Show c.-1088_-1087insGAGAGAGAGAGAGAGAGAGAG	TREML1	ENSG00000161911.12	transcript	ENST00000426005.7	protein_coding		1029		chr6	TogoVar
TRERF1_chr6_42219931_42456926	42277905	G G	GGAAGAAG others(14): Show GGAAGAAGAAGAAGAAGAAGAA	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0158 a0001c0001t0047g0158	1	46	0.0217	21	c.-25 others(40): Show c.-258-8078_-258-8058dupTTCTTCTTCTTCTTCTTCTTC	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	4/17			chr6	TogoVar
TRIM11_chr1_228388676_228411835	228389729	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp2 NA19078.hp2 HG01993.hp2 NA19078.hp2	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0001 a0001c0009t0001 a0001c0002t0001 a0001c0009t0001	a0001c0002t0001g0035 a0001c0009t0001g0092 a0001c0002t0001g0035 a0001c0009t0001g0092	2	99	0.0202	21	c.49 others(32): Show c.4975_*4976insTTTTTTTTTTTTTTTTTTTTT	TRIM11	ENSG00000154370.16	transcript	ENST00000284551.11	protein_coding		3946		chr1	TogoVar
TRIM14_chr9_98079353_98124222	98119798	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0051 a0001c0001t0002g0051	1	240	0.0042	21	c.-61 others(30): Show c.-611_-610insAAAAAAAAAAAAAAAAAAAAA	TRIM14	ENSG00000106785.15	transcript	ENST00000341469.7	protein_coding		577		chr9	TogoVar
TRIM14_chr9_98079353_98124222	98119808	G G	GTTTTTGT others(14): Show GTTTTTGTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0147 a0001c0001t0003g0147	1	187	0.0053	21	c.-62 others(30): Show c.-621_-620insAAAAAAAAAAAAAAACAAAAA	TRIM14	ENSG00000106785.15	transcript	ENST00000341469.7	protein_coding		587		chr9	TogoVar
TRIM14_chr9_98079353_98124222	98119808	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0146 a0001c0001t0003g0146	1	187	0.0053	21	c.-62 others(30): Show c.-621_-620insAAAAAAAAAAAAAAAAAAAAA	TRIM14	ENSG00000106785.15	transcript	ENST00000341469.7	protein_coding		587		chr9	TogoVar
TRIM23_chr5_65584690_65629333	65627131	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	105	0.0095	21	c.-28 others(32): Show c.-2878_-2858dupTTTTTTTTTTTTTTTTTTTTT	TRIM23	ENSG00000113595.15	transcript	ENST00000231524.14	protein_coding		2799		chr5	TogoVar
TRIM24_chr7_138455259_138594996	138463989	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02572.hp2 HG02738.hp1 others(2): Show HG00280.hp1 HG02572.hp2 HG02738.hp1 NA18522.hp2 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0010 a0001c0002 a0001c0005 a0001c0010	a0001c0002t0004 a0001c0005t0013 a0001c0010t0013 a0001c0002t0004 a0001c0005t0013 a0001c0010t0013	a0001c0002t0004g0122 a0001c0002t0004g0123 a0001c0002t0004g0124 others(2): Show a0001c0002t0004g0122 a0001c0002t0004g0123 a0001c0002t0004g0124 a0001c0005t0013g0114 a0001c0010t0013g0113	5	79	0.0633	21	c.364 others(38): Show c.364+3080_364+3100dupTTTTTTTTTTTTTTTTTTTTT	TRIM24	ENSG00000122779.18	transcript	ENST00000343526.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr7	TogoVar
TRIM24_chr7_138455259_138594996	138568379	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0060 a0001c0001t0001g0060	1	76	0.0132	21	c.170 others(38): Show c.1704+735_1704+755dupTTTTTTTTTTTTTTTTTTTTT	TRIM24	ENSG00000122779.18	transcript	ENST00000343526.9	protein_coding	10/18		INFO_REALIGN_3_PRIME	chr7	TogoVar
TRIM26_chr6_30179455_30218406	30193182	A A	ATATATAT others(14): Show ATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02896.hp1 HG02886.hp2 HG02896.hp1	a0001 a0001	a0001c0005 a0001c0009 a0001c0005 a0001c0009	a0001c0005t0001 a0001c0009t0001 a0001c0005t0001 a0001c0009t0001	a0001c0005t0001g0301 a0001c0009t0001g0192 a0001c0005t0001g0301 a0001c0009t0001g0192	2	242	0.0083	21	c.766 others(38): Show c.766-3148_766-3147insAAATATATATATATATATATA	TRIM26	ENSG00000234127.9	transcript	ENST00000454678.7	protein_coding	6/9			chr6	TogoVar
TRIM2_chr4_153199443_153344317	153244253	T T	TTCCTCCT others(14): Show TTCCTCCTCCTCCTCCTCCTCC	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02896.hp1 HG02738.hp2 HG02896.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0002 a0001c0002t0002 a0001c0003t0002	a0001c0002t0002g0050 a0001c0003t0002g0052 a0001c0002t0002g0050 a0001c0003t0002g0052	2	223	0.0090	21	c.31- others(38): Show c.31-26034_31-26014dupCTCCTCCTCCTCCTCCTCCTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM2_chr4_153199443_153344317	153244319	C C	CTCCTCCT others(14): Show CTCCTCCTCCTCCTCCTCTTCT	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03654.hp2 HG03239.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0249 a0001c0002t0001g0220 a0001c0001t0001g0249 a0001c0002t0001g0220	2	171	0.0117	21	c.31- others(38): Show c.31-26014_31-26013insCTCCTCCTCCTCCTCTTCTTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM2_chr4_153199443_153344317	153244319	C C	CTCCTCCT others(14): Show CTCCTCCTCCTCCTCTTCTTCT	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0119 a0001c0004t0003g0119	1	170	0.0059	21	c.31- others(38): Show c.31-26014_31-26013insCTCCTCCTCCTCTTCTTCTTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM2_chr4_153199443_153344317	153244319	C C	CTCCTCCT others(14): Show CTCCTCCTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0257 a0001c0001t0001g0257	1	170	0.0059	21	c.31- others(38): Show c.31-26014_31-26013insCTCCTCTTCTTCTTCTTCTTC	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM2_chr4_153199443_153344317	153273270	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0268 a0001c0002t0002g0268	1	66	0.0152	21	c.216 others(38): Show c.216-2620_216-2600dupTTTTTTTTTTTTTTTTTTTTT	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM31_chr6_30097897_30118090	30111030	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01255.hp2 NA20905.hp1 HG01255.hp2 NA20905.hp1	a0006 a0010 a0006 a0010	a0006c0012 a0010c0019 a0006c0012 a0010c0019	a0006c0012t0001 a0010c0019t0014 a0006c0012t0001 a0010c0019t0014	a0006c0012t0001g0078 a0010c0019t0014g0208 a0006c0012t0001g0078 a0010c0019t0014g0208	2	71	0.0282	21	c.514 others(36): Show c.514-353_514-352insAAAAAAAAAAAAAAAAAAAAA	TRIM31	ENSG00000204616.11	transcript	ENST00000376734.4	protein_coding	3/8			chr6	TogoVar
TRIM33_chr1_114387790_114516203	114387960	A A	ATATATAT others(14): Show ATATATATATATATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0014 a0003c0004t0014	a0003c0004t0014g0005 a0003c0004t0014g0005	1	71	0.0141	21	c.96 others(32): Show c.9687_*9688insAAAAAAATATATATATATATA	TRIM33	ENSG00000197323.12	transcript	ENST00000358465.7	protein_coding		4829		chr1	TogoVar
TRIM33_chr1_114387790_114516203	114413578	A A	AGAAAAGA others(14): Show AGAAAAGAAAAAGACTTTTTCT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	197	0.0051	21	c.206 others(40): Show c.2062-3283_2062-3263dupAGAAAAAGTCTTTTTCTTTTC	TRIM33	ENSG00000197323.12	transcript	ENST00000358465.7	protein_coding	11/19			chr1	TogoVar
TRIM36_chr5_115119772_115174908	115128758	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02015.hp1 HG02135.hp1 others(8): Show HG01069.hp1 HG02015.hp1 HG02135.hp1 HG02145.hp2 HG02257.hp1 HG02738.hp2 HG03704.hp1 HG03927.hp1 NA18975.hp2 NA19010.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0028 a0001c0001t0001 a0001c0001t0028	a0001c0001t0001g0017 a0001c0001t0001g0105 a0001c0001t0001g0109 others(7): Show a0001c0001t0001g0017 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0162 a0001c0001t0001g0336 a0001c0001t0001g0338 a0001c0001t0028g0345	11	40	0.2750	21	c.179 others(40): Show c.1796+1813_1796+1833dupTTTTTTTTTTTTTTTTTTTTT	TRIM36	ENSG00000152503.10	transcript	ENST00000513154.6	protein_coding	9/9			chr5	TogoVar
TRIM37_chr17_58993202_59111880	59012215	C C	CCAGCAGC others(14): Show CCAGCAGCAGCAGCAGCAGCAG	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG02486.hp1 HG03453.hp1 HG01978.hp1 HG02486.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0263 a0001c0001t0002g0107 a0001c0001t0002g0111 a0001c0001t0001g0263 a0001c0001t0002g0107 a0001c0001t0002g0111	3	336	0.0089	21	c.269 others(38): Show c.2695+112_2695+113insCTGCTGCTGCTGCTGCTGCTG	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	22/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59012227	G G	GCAGCAGC others(14): Show GCAGCAGCAGCAGCAGCACCAC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02622.hp2 HG03704.hp2 others(3): Show HG02615.hp1 HG02622.hp2 HG03704.hp2 HG06807.hp2 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0003t0006	a0001c0001t0002g0117 a0001c0001t0003g0086 a0001c0001t0004g0091 others(3): Show a0001c0001t0002g0117 a0001c0001t0003g0086 a0001c0001t0004g0091 a0001c0003t0006g0212 a0001c0003t0006g0217 a0001c0003t0006g0218	6	104	0.0577	21	c.269 others(38): Show c.2695+100_2695+101insGTGGTGCTGCTGCTGCTGCTG	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	22/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59012227	G G	GCAGCAGC others(14): Show GCAGCAGCAGCAGCAGCAGCAC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02055.hp1 others(21): Show HG01243.hp2 HG01884.hp1 HG02055.hp1 HG02280.hp2 HG02486.hp2 HG02572.hp2 HG02622.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 NA18522.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007	a0001c0001t0001g0256 a0001c0001t0002g0112 a0001c0001t0002g0115 others(21): Show a0001c0001t0001g0256 a0001c0001t0002g0112 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0003g0028 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0074 a0001c0001t0007g0213 a0001c0001t0007g0214 a0001c0001t0007g0215 a0001c0001t0007g0216	24	122	0.1967	21	c.269 others(38): Show c.2695+100_2695+101insGTGCTGCTGCTGCTGCTGCTG	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	22/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59042439	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0017 a0001c0001t0008g0017	1	324	0.0031	21	c.166 others(38): Show c.1668-542_1668-541insATATATATATATATATATATA	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	16/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59042443	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18949.hp1 NA18992.hp2 NA18944.hp1 NA18949.hp1 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0339 a0001c0001t0003g0011 a0001c0001t0003g0122 a0001c0001t0001g0339 a0001c0001t0003g0011 a0001c0001t0003g0122	3	299	0.0100	21	c.166 others(38): Show c.1668-546_1668-545insATATATATATATATATATATA	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	16/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59042445	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0045 a0001c0001t0003g0045	1	268	0.0037	21	c.166 others(38): Show c.1668-548_1668-547insATATATATATATATATATATA	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	16/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59042447	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18963.hp2 NA18952.hp1 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0030 a0001c0001t0003g0031	2	231	0.0087	21	c.166 others(38): Show c.1668-550_1668-549insATATATATATATATATATATA	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	16/23			chr17	TogoVar
TRIM38_chr6_25957802_25996231	25988496	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0022 a0001c0001t0054g0022	1	22	0.0455	21	c.48 others(32): Show c.4826_*4827insTTTTTTTTTTTTTTTTTTTTT	TRIM38	ENSG00000112343.11	transcript	ENST00000357085.5	protein_coding	8/8	4827	INFO_REALIGN_3_PRIME	chr6	TogoVar
TRIM3_chr11_6443613_6478941	6468520	G G	GAACCCAG others(14): Show GAACCCAGAGAAATGGTAGGAA	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0237 a0001c0001t0003g0237	1	382	0.0026	21	c.-37 others(38): Show c.-37-2809_-37-2789dupTTCCTACCATTTCTCTGGGTT	TRIM3	ENSG00000110171.21	transcript	ENST00000345851.8	protein_coding	1/11			chr11	TogoVar
TRIM49B_chr11_49023823_49043155	49035339	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0108 a0002c0002t0001g0108	1	43	0.0233	21	c.761 others(36): Show c.761+240_761+260dupTTTTTTTTTTTTTTTTTTTTT	TRIM49B	ENSG00000182053.13	transcript	ENST00000332682.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
TRIM54_chr2_27277429_27312435	27309371	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	89	0.0112	21	c.24 others(32): Show c.2486_*2487insAAAAAAAAAAAAAAAAAAAAA	TRIM54	ENSG00000138100.14	transcript	ENST00000380075.7	protein_coding		1937		chr2	TogoVar
TRIM62_chr1_33140399_33187043	33186805	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0018 a0001c0002t0018	a0001c0002t0018g0230 a0001c0002t0018g0230	1	331	0.0030	21	c.-53 others(32): Show c.-5374_-5373insTTTTTTTTTTTTTTTTTTTTT	TRIM62	ENSG00000116525.14	transcript	ENST00000291416.10	protein_coding		4763		chr1	TogoVar
TRIM64B_chr11_89865438_89883487	89878742	A A	ATTTTTTT others(14): Show ATTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19001.hp1 NA19076.hp1 NA19001.hp1 NA19076.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0007 a0006c0006t0001g0007	2	52	0.0385	21	c.-37 others(30): Show c.-376_-375insAAAAAAAAAAAAAAAAAAAAA	TRIM64B	ENSG00000189253.8	transcript	ENST00000329862.7	protein_coding		256		chr11	TogoVar
TRIM66_chr11_8607040_8687665	8628636	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0327 a0004c0004t0001g0327	1	180	0.0056	21	c.231 others(40): Show c.2311-3409_2311-3408insCTCTCTCTTTTTTTTTTTTTT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	15/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8649716	G G	GGCAGGGA others(14): Show GGCAGGGAGAGGTGGGATTGGT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02486.hp2 HG02559.hp2 others(4): Show HG02258.hp2 HG02486.hp2 HG02559.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG03209.hp1	a0011 a0023 a0025 a0011 a0023 a0025	a0011c0012 a0023c0029 a0025c0033 a0011c0012 a0023c0029 a0025c0033	a0011c0012t0007 a0023c0029t0007 a0025c0033t0007 a0011c0012t0007 a0023c0029t0007 a0025c0033t0007	a0011c0012t0007g0209 a0011c0012t0007g0210 a0011c0012t0007g0211 others(4): Show a0011c0012t0007g0209 a0011c0012t0007g0210 a0011c0012t0007g0211 a0011c0012t0007g0221 a0011c0012t0007g0222 a0023c0029t0007g0203 a0025c0033t0007g0107	7	388	0.0180	21	c.592 others(33): Show c.592+3_592+23dupACCAATCCCACCTCTCCCTGC	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	8/24			chr11	TogoVar
TRIM67_chr1_231157058_231226565	231167319	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp1 HG00544.hp2 others(43): Show HG00323.hp1 HG00423.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp2 HG01168.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp2 HG01361.hp1 HG01433.hp2 HG01516.hp2 HG01952.hp1 HG02040.hp1 HG02080.hp2 HG02135.hp1 HG02257.hp2 HG02451.hp2 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp2 HG03540.hp1 HG03942.hp2 HG06807.hp1 NA18955.hp1 NA18959.hp2 NA18962.hp1 NA18967.hp2 NA18985.hp1 NA18985.hp2 NA19066.hp1 NA19066.hp2 NA19090.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0001c0018 a0002c0007 a0005c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0050 a0001c0002t0003 a0001c0002t0005 a0001c0002t0009 a0001c0002t0037 a0001c0006t0001 a0001c0018t0003 a0002c0007t0019 a0005c0015t0003	a0001c0001t0001g0006 a0001c0001t0001g0115 a0001c0001t0001g0116 others(41): Show a0001c0001t0001g0006 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0308 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0315 a0001c0001t0002g0217 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0302 a0001c0001t0002g0307 a0001c0001t0002g0316 a0001c0001t0002g0317 a0001c0001t0004g0294 a0001c0001t0005g0223 a0001c0001t0005g0227 a0001c0001t0005g0228 a0001c0001t0050g0346 a0001c0002t0003g0007 a0001c0002t0003g0298 a0001c0002t0005g0297 a0001c0002t0009g0114 a0001c0002t0009g0206 a0001c0002t0037g0062 a0001c0006t0001g0306 a0001c0006t0001g0309 a0001c0018t0003g0314 a0002c0007t0019g0313 a0005c0015t0003g0301	46	141	0.3262	21	c.104 others(40): Show c.1044+3307_1044+3327dupTTTTTTTTTTTTTTTTTTTTT	TRIM67	ENSG00000119283.16	transcript	ENST00000366653.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
TRIM67_chr1_231157058_231226565	231176906	C C	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19057.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0216 a0001c0001t0014g0216	1	96	0.0104	21	c.104 others(42): Show c.1044+12910_1044+12911insAAAAAAAAAAAAAAAAAAAAA	TRIM67	ENSG00000119283.16	transcript	ENST00000366653.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
TRIM6_chr11_5591637_5617952	5596520	T T	TTCCCCCC others(14): Show TTCCCCCCTTCCCCCTTCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG01081.hp1 HG00280.hp2 HG01081.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0011 a0001c0007t0001g0011	2	476	0.0042	21	c.-37 others(30): Show c.-378_-377insTCCCCCCTTCCCCCTTCCCCC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		116		chr11	TogoVar
TRIM6_chr11_5591637_5617952	5596522	C C	CCCCCCTT others(14): Show CCCCCCTTCCCCCTTCCCCCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00673.hp1 HG02647.hp2 others(1): Show HG00558.hp2 HG00673.hp1 HG02647.hp2 NA18943.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0009 a0001c0001 a0001c0004 a0003c0009	a0001c0001t0005 a0001c0004t0002 a0003c0009t0031 a0001c0001t0005 a0001c0004t0002 a0003c0009t0031	a0001c0001t0005g0153 a0001c0001t0005g0154 a0001c0004t0002g0001 others(1): Show a0001c0001t0005g0153 a0001c0001t0005g0154 a0001c0004t0002g0001 a0003c0009t0031g0084	4	378	0.0106	21	c.-37 others(30): Show c.-376_-375insCCCCCTTCCCCCTTCCCCCTT	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		114		chr11	TogoVar
TRIM6_chr11_5591637_5617952	5596542	T T	TCCCCCCT others(14): Show TCCCCCCTTCCCCCTTCCCCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0186 a0001c0007t0001g0186	1	477	0.0021	21	c.-35 others(30): Show c.-356_-355insCCCCCCTTCCCCCTTCCCCTC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		94		chr11	TogoVar
TRIM6_chr11_5591637_5617952	5596543	T T	TCCCCCCT others(14): Show TCCCCCCTTCCCCCTTCCCCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	251	0.0040	21	c.-35 others(30): Show c.-355_-354insCCCCCCTTCCCCCTTCCCCTC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		93		chr11	TogoVar
TRIM6_chr11_5591637_5617952	5596543	T T	TCCCCCTT others(14): Show TCCCCCTTCCCCCTTCCCCCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0201 a0001c0003t0008g0201	1	251	0.0040	21	c.-35 others(30): Show c.-355_-354insCCCCCTTCCCCCTTCCCCCTC	TRIM6	ENSG00000121236.21	transcript	ENST00000380097.8	protein_coding		93		chr11	TogoVar

Search by Variant

Search

Search Results