Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZSCAN22_chr19_58321994_58347332	58326596	C C	CCTCACAC others(14): Show CCTCACACAGGCACCCTCAGCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0001 a0001c0004t0001g0001	1	397	0.0025	21	c.-57 others(30): Show c.-570_-569insCTCACACAGGCACCCTCAGCT	ZSCAN22	ENSG00000182318.6	transcript	ENST00000329665.5	protein_coding		397		chr19	TogoVar
ZSCAN25_chr7_99611946_99637408	99632986	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	282	0.0035	21	c.29 others(32): Show c.2966_*2967insTTTTTTTTTTTTTTTTTTTTT	ZSCAN25	ENSG00000197037.11	transcript	ENST00000394152.7	protein_coding		579		chr7	TogoVar
ZSCAN29_chr15_43353175_43376043	43357270	G G	GTTTTTTT others(14): Show GTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0007 a0003c0003t0007	a0003c0003t0007g0010 a0003c0003t0007g0010	1	3	0.3333	21	c.38 others(32): Show c.3802_*3803insAAAAAAAAAAAAAAAAAAAAA	ZSCAN29	ENSG00000140265.14	transcript	ENST00000684362.1	protein_coding		904		chr15	TogoVar
ZSCAN5A_chr19_56216303_56319839	56216589	C C	CTTTTTTT others(14): Show CTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0024 a0001c0001t0002g0024	1	179	0.0056	21	c.49 others(32): Show c.4985_*4986insAAAAAAAAAAAAAAAAAAAAA	ZSCAN5A	ENSG00000131848.10	transcript	ENST00000683990.1	protein_coding		4713		chr19	TogoVar
ZSWIM2_chr2_186822475_186854170	186849765	C C	CTCTCTCT others(14): Show CTCTCTCTCTCTCTCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0116 a0001c0001t0004g0116	1	67	0.0149	21	c.-63 others(30): Show c.-636_-635insAGAGAGAGAGAGAGAGAGAGA	ZSWIM2	ENSG00000163012.4	transcript	ENST00000295131.3	protein_coding		596		chr2	TogoVar
ZSWIM3_chr20_45852614_45884122	45873815	A A	AAATTTGC others(14): Show AAATTTGCTACCCAAAATCTCT	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0102 a0002c0001t0001g0102	1	384	0.0026	21	c.156 others(38): Show c.156-2898_156-2897insATTTGCTACCCAAAATCTCTA	ZSWIM3	ENSG00000132801.7	transcript	ENST00000255152.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr20	TogoVar
ZSWIM4_chr19_13790443_13837254	13794438	T T	TAAAAAAA others(14): Show TAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG01943.hp1 HG02738.hp1 others(7): Show HG01071.hp2 HG01943.hp1 HG02738.hp1 HG02738.hp2 HG03834.hp2 NA18944.hp1 NA18999.hp1 NA19080.hp1 NA19080.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0003t0001 a0002c0003t0003 a0002c0003t0004	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0217 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0217 a0001c0001t0001g0246 a0001c0001t0002g0250 a0001c0001t0004g0142 a0002c0003t0001g0220 a0002c0003t0003g0219 a0002c0003t0004g0231	10	17	0.5882	21	c.-12 others(32): Show c.-1211_-1210insAAAAAAAAAAAAAAAAAAAAA	ZSWIM4	ENSG00000132003.10	transcript	ENST00000590508.6	protein_coding		1004		chr19	TogoVar
ZSWIM7_chr17_15971560_16004704	15976067	G G	GAAAAAAA others(14): Show GAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18983.hp2 NA18994.hp2 NA18983.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0029 a0001c0001t0001g0002 a0001c0001t0001g0029	2	269	0.0074	21	c.19 others(32): Show c.1979_*1980insTTTTTTTTTTTTTTTTTTTTT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		492		chr17	TogoVar
ZSWIM7_chr17_15971560_16004704	15976098	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAAAAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18956.hp2 NA19002.hp2 NA18956.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0135 a0001c0001t0001g0029 a0001c0001t0001g0135	2	186	0.0108	21	c.19 others(32): Show c.1948_*1949insATTTTTTTTTTTTTTTTTTTT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		461		chr17	TogoVar
ZSWIM7_chr17_15971560_16004704	15976098	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAAAAAATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	185	0.0054	21	c.19 others(32): Show c.1948_*1949insATATTTTTTTTTTTTTTTTTT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		461		chr17	TogoVar
ZSWIM7_chr17_15971560_16004704	15976098	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp1 NA18939.hp2 NA18952.hp1 HG03654.hp1 NA18939.hp2 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0110 a0001c0001t0001g0117 a0001c0001t0001g0003 a0001c0001t0001g0110 a0001c0001t0001g0117	3	187	0.0160	21	c.19 others(32): Show c.1948_*1949insATATATATATTTTTTTTTTTT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		461		chr17	TogoVar
ZSWIM9_chr19_48165680_48202620	48192476	A A	ATATATAT others(14): Show ATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0212 a0001c0002t0001g0212	1	144	0.0069	21	c.589 others(38): Show c.589-2177_589-2176insTATATATATATATATATATAT	ZSWIM9	ENSG00000185453.13	transcript	ENST00000614654.2	protein_coding	3/3			chr19	TogoVar
ZWILCH_chr15_66500326_66555130	66544724	T T	TGTGTGTG others(14): Show TGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0292 a0001c0001t0002g0292	1	51	0.0196	21	c.168 others(40): Show c.1688-1867_1688-1866insGTGTGTGTGTGTGTGTGTGTG	ZWILCH	ENSG00000174442.12	transcript	ENST00000307897.10	protein_coding	17/18			chr15	TogoVar
ZYG11B_chr1_52721453_52832336	52773627	A A	ATATATAT others(14): Show ATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03195.hp2 HG02257.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0338 a0001c0001t0014g0339 a0001c0001t0014g0338 a0001c0001t0014g0339	2	157	0.0127	21	c.951 others(38): Show c.951+1854_951+1855insATATATATATATTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52773627	A A	ATATATAT others(14): Show ATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0017 a0001c0001t0016g0017	1	156	0.0064	21	c.951 others(38): Show c.951+1854_951+1855insATATATATATTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0178 a0001c0001t0006g0178	1	9	0.1111	21	c.952 others(38): Show c.952-3623_952-3622insAAAAAAAAAAAAATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG06807.hp2 HG02647.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0187 a0001c0001t0006g0262 a0001c0001t0006g0187 a0001c0001t0006g0262	2	10	0.2000	21	c.952 others(38): Show c.952-3623_952-3622insAAAAAAAAAAATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(14): Show AAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0175 a0001c0001t0008g0175	1	9	0.1111	21	c.952 others(38): Show c.952-3623_952-3622insAAAAAAAAATATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(14): Show AAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0259 a0001c0001t0001g0259	1	9	0.1111	21	c.952 others(38): Show c.952-3623_952-3622insAAAAAAATATATATATATATA	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZZEF1_chr17_3999445_4148030	4142924	G G	GCAGCCGC others(14): Show GCAGCCGCCGCCGCCGCCTCCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0029 a0002c0002t0029	a0002c0002t0029g0258 a0002c0002t0029g0258	1	294	0.0034	21	c.-50 others(28): Show c.-50_-30dupGGGAGGCGGCGGCGGCGGCTG	ZZEF1	ENSG00000074755.15	transcript	ENST00000381638.7	protein_coding	1/55	30		chr17	TogoVar

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