Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTPN21_chr14_88460778_88560007	88488341	A A	AGGCGAAC others(15): Show AGGCGAACACTGCCCACTGTAGT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01192.hp1 HG01243.hp1 others(34): Show HG00741.hp1 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01258.hp2 HG01891.hp1 HG02055.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02723.hp2 HG02738.hp1 HG02818.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG04228.hp1 NA18953.hp2 NA18960.hp2 NA18970.hp1 NA19240.hp1 NA20752.hp1	a0002 a0004 a0014 a0002 a0004 a0014	a0002c0002 a0002c0004 a0002c0008 others(2): Show a0002c0002 a0002c0004 a0002c0008 a0004c0003 a0014c0023	a0002c0002t0008 a0002c0002t0009 a0002c0002t0012 others(10): Show a0002c0002t0008 a0002c0002t0009 a0002c0002t0012 a0002c0002t0023 a0002c0004t0006 a0002c0004t0009 a0002c0008t0006 a0004c0003t0006 a0004c0003t0019 a0004c0003t0024 a0004c0003t0025 a0004c0003t0045 a0014c0023t0006	a0002c0002t0008g0075 a0002c0002t0008g0076 a0002c0002t0009g0026 others(34): Show a0002c0002t0008g0075 a0002c0002t0008g0076 a0002c0002t0009g0026 a0002c0002t0009g0035 a0002c0002t0009g0036 a0002c0002t0009g0073 a0002c0002t0009g0074 a0002c0002t0009g0077 a0002c0002t0012g0037 a0002c0002t0012g0038 a0002c0002t0012g0039 a0002c0002t0012g0040 a0002c0002t0023g0004 a0002c0004t0006g0079 a0002c0004t0006g0081 a0002c0004t0006g0082 a0002c0004t0006g0083 a0002c0004t0006g0084 a0002c0004t0006g0085 a0002c0004t0006g0086 a0002c0004t0006g0087 a0002c0004t0006g0088 a0002c0004t0009g0042 a0002c0008t0006g0089 a0002c0008t0006g0090 a0002c0008t0006g0091 a0004c0003t0006g0093 a0004c0003t0006g0094 a0004c0003t0006g0095 a0004c0003t0006g0096 a0004c0003t0006g0098 a0004c0003t0019g0099 a0004c0003t0019g0100 a0004c0003t0024g0008 a0004c0003t0025g0007 a0004c0003t0045g0335 a0014c0023t0006g0080	37	348	0.1063	22	c.933 others(39): Show c.933-2521_933-2500dupACTACAGTGGGCAGTGTTCGCC	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	10/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88517661	C C	CAGGTGTA others(15): Show CAGGTGTATATATACATATATAT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0013 a0013	a0013c0027 a0013c0027	a0013c0027t0027 a0013c0027t0027	a0013c0027t0027g0029 a0013c0027t0027g0029	1	348	0.0029	22	c.181 others(37): Show c.181-401_181-400insATATATATGTATATATACACCT	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518386	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0070 a0001c0001t0008g0070	1	348	0.0029	22	c.181 others(39): Show c.181-1147_181-1126dupTATATATATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518386	G G	GTGTATAT others(15): Show GTGTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0012 a0001c0001t0011g0012	1	348	0.0029	22	c.181 others(39): Show c.181-1126_181-1125insTATATATATATATATATATACA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	A A	ATATATAT others(15): Show ATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0009 a0001c0001t0011g0009	1	348	0.0029	22	c.181 others(39): Show c.181-1154_181-1153insAAAATATATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	A A	ATATATAT others(15): Show ATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0149 a0001c0001t0034g0149	1	348	0.0029	22	c.181 others(39): Show c.181-1154_181-1153insAAAAAAAATATATATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN23_chr3_47376021_47418435	47417894	G G	GGGTGAGA others(15): Show GGGTGAGAGGGGGCGGGGGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp1 HG02738.hp1 HG01981.hp1 HG02738.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0167 a0004c0004t0001g0238 a0004c0004t0001g0167 a0004c0004t0001g0238	2	332	0.0060	22	c.47 others(33): Show c.4709_*4710insGGTGAGAGGGGGCGGGGGAGAA	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4460		chr3	TogoVar
PTPN23_chr3_47376021_47418435	47417894	G G	GGTGAGAG others(15): Show GGTGAGAGGGGGCGGGGGGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0004 a0004	a0004c0036 a0004c0036	a0004c0036t0001 a0004c0036t0001	a0004c0036t0001g0028 a0004c0036t0001g0028	1	332	0.0030	22	c.47 others(33): Show c.4709_*4710insGTGAGAGGGGGCGGGGGGAGAA	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4460		chr3	TogoVar
PTPN23_chr3_47376021_47418435	47417894	G G	GGTGAGAG others(15): Show GGTGAGAGGGGGGCGGGGGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0001 a0006c0011t0001	a0006c0011t0001g0147 a0006c0011t0001g0147	1	332	0.0030	22	c.47 others(33): Show c.4709_*4710insGTGAGAGGGGGGCGGGGGAGAA	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4460		chr3	TogoVar
PTPN23_chr3_47376021_47418435	47417900	A A	AGGGGGCG others(15): Show AGGGGGCGGGGGAGAAGTGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0189 a0004c0004t0001g0189	1	332	0.0030	22	c.47 others(33): Show c.4715_*4716insGGGGGCGGGGGAGAAGTGAGAG	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4466		chr3	TogoVar
PTPN23_chr3_47376021_47418435	47417939	T T	TGGGGGGA others(15): Show TGGGGGGAGAGGGTGGTGCGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03139.hp2 HG03098.hp2 HG03139.hp2	a0003 a0004 a0003 a0004	a0003c0002 a0004c0004 a0003c0002 a0004c0004	a0003c0002t0001 a0004c0004t0001 a0003c0002t0001 a0004c0004t0001	a0003c0002t0001g0015 a0004c0004t0001g0169 a0003c0002t0001g0015 a0004c0004t0001g0169	2	332	0.0060	22	c.47 others(33): Show c.4754_*4755insGGGGGGAGAGGGTGGTGCGGGG	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4505		chr3	TogoVar
PTPN2_chr18_12787152_12889237	12807586	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0174 a0001c0001t0001g0174	1	370	0.0027	22	c.859 others(39): Show c.859-5436_859-5435insATATTTTTTTTTTTTTTTTTTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	7/8			chr18	TogoVar
PTPN3_chr9_109370700_109503307	109447884	A A	AACAGCCC others(15): Show AACAGCCCTCTCTATTCTCCTGT	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0015 a0002c0002t0009g0015	1	290	0.0035	22	c.413 others(37): Show c.413+905_413+926dupACAGGAGAATAGAGAGGGCTGT	PTPN3	ENSG00000070159.14	transcript	ENST00000374541.4	protein_coding	6/25			chr9	TogoVar
PTPN4_chr2_119754922_119989899	119973655	G G	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0034 a0001c0001t0036g0034	1	252	0.0040	22	c.269 others(41): Show c.2695-3323_2695-3302dupTTTTTTTTTTTTTTTTTTTTTT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN5_chr11_18722928_18796798	18746192	T T	TATATATA others(15): Show TATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0268 a0002c0002t0001g0268	1	388	0.0026	22	c.98- others(37): Show c.98-1994_98-1993insGTATATATATATATATATATAT	PTPN5	ENSG00000110786.18	transcript	ENST00000358540.7	protein_coding	3/14			chr11	TogoVar
PTPN9_chr15_75458251_75584315	75530711	T T	TATAATAT others(15): Show TATAATATACTATTATATAATTA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0020 a0001c0001t0003g0020	1	326	0.0031	22	c.64- others(37): Show c.64-3451_64-3450insTAATTATATAATAGTATATTAT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75537753	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp2 HG01123.hp1 others(10): Show HG00642.hp1 HG00738.hp2 HG01123.hp1 HG01358.hp1 HG01884.hp1 HG01891.hp2 HG02056.hp2 HG02622.hp1 HG02809.hp1 HG02970.hp1 NA18985.hp2 NA19012.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0021 a0001c0001t0001 a0001c0001t0006 a0001c0001t0021	a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0069 others(10): Show a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0144 a0001c0001t0006g0305 a0001c0001t0006g0306 a0001c0001t0006g0307 a0001c0001t0006g0310 a0001c0001t0006g0311 a0001c0001t0021g0312	13	326	0.0399	22	c.64- others(39): Show c.64-10514_64-10493dupTTTTTTTTTTTTTTTTTTTTTT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPRC_chr1_198634040_198762476	198726860	T T	TCTTCTTC others(15): Show TCTTCTTCTTTTTCTTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00741.hp2 HG01515.hp2 others(1): Show HG00280.hp1 HG00741.hp2 HG01515.hp2 HG03942.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0007 a0003c0004t0007	a0003c0004t0007g0137 a0003c0004t0007g0138 a0003c0004t0007g0139 others(1): Show a0003c0004t0007g0137 a0003c0004t0007g0138 a0003c0004t0007g0139 a0003c0004t0007g0140	4	296	0.0135	22	c.172 others(41): Show c.1721-1477_1721-1476insCTTCTTTTTCTTTTCTTTCCTT	PTPRC	ENSG00000081237.21	transcript	ENST00000442510.8	protein_coding	15/32		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTPRD_chr9_8309246_10618002	8320657	A A	AAAAAAAT others(15): Show AAAAAAATGGTTAAGAGCCATTG	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02559.hp1 HG02559.hp2 others(3): Show HG01981.hp2 HG02559.hp1 HG02559.hp2 HG02622.hp2 HG03139.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0012	a0001c0001t0001 a0001c0001t0019 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0019 a0001c0002t0001 a0001c0002t0005 a0001c0006t0001 a0001c0012t0005	a0001c0001t0001g0004 a0001c0001t0019g0023 a0001c0002t0001g0009 others(3): Show a0001c0001t0001g0004 a0001c0001t0019g0023 a0001c0002t0001g0009 a0001c0002t0005g0025 a0001c0006t0001g0019 a0001c0012t0005g0021	6	34	0.1765	22	c.553 others(39): Show c.5535-713_5535-692dupCAATGGCTCTTAACCATTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	44/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8329959	G G	GTGGATCG others(15): Show GTGGATCGTATCTTGCTGGGCTC	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	34	0.0294	22	c.553 others(41): Show c.5534+1601_5534+1622dupGAGCCCAGCAAGATACGATCCA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	44/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8556553	A A	ATTTTATA others(15): Show ATTTTATATTTCTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01981.hp2 HG02055.hp1 HG00642.hp2 HG01981.hp2 HG02055.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0011 a0002c0005 a0001c0001 a0001c0011 a0002c0005	a0001c0001t0019 a0001c0011t0017 a0002c0005t0010 a0001c0001t0019 a0001c0011t0017 a0002c0005t0010	a0001c0001t0019g0023 a0001c0011t0017g0016 a0002c0005t0010g0026 a0001c0001t0019g0023 a0001c0011t0017g0016 a0002c0005t0010g0026	3	34	0.0882	22	c.353 others(41): Show c.353-27775_353-27774insAAAAAAAAAAAGAAATATAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	14/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8557455	T T	TATATATA others(15): Show TATATATACACACATACACATAC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	22	c.353 others(41): Show c.353-28677_353-28676insGTATGTGTATGTGTGTATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	14/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8933340	G G	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	22	c.-10 others(43): Show c.-104+85335_-104+85356dupAAAAAAAAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	11/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9208020	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0008 a0003c0009t0008	a0003c0009t0008g0003 a0003c0009t0008g0003	1	34	0.0294	22	c.-20 others(43): Show c.-202-24658_-202-24657insAAAAAAAAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9275174	A A	ATATGTTA others(15): Show ATATGTTATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0021 a0001c0008t0021	a0001c0008t0021g0002 a0001c0008t0021g0002	1	34	0.0294	22	c.-20 others(43): Show c.-202-91812_-202-91811insATATATATATATATATAACATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9325054	T T	TCTGTTTT others(15): Show TCTGTTTTGGTACAAGTACCACG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0001 a0001c0004t0003g0001	1	34	0.0294	22	c.-20 others(43): Show c.-203+72373_-203+72394dupCGTGGTACTTGTACCAAAACAG	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9333500	T T	TATATTTT others(15): Show TATATTTTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0004 a0001c0018t0004	a0001c0018t0004g0020 a0001c0018t0004g0020	1	34	0.0294	22	c.-20 others(43): Show c.-203+63948_-203+63949insTATATATATATATATAAAATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9516773	T T	TGATCTGC others(15): Show TGATCTGCCCTCCTCAGCCTCCC	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0026 a0001c0007t0026	a0001c0007t0026g0034 a0001c0007t0026g0034	1	34	0.0294	22	c.-23 others(43): Show c.-237+57937_-237+57958dupGGGAGGCTGAGGAGGGCAGATC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	8/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9629238	G G	GTGTGTAT others(15): Show GTGTGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0010 a0001c0002t0015g0010	1	34	0.0294	22	c.-28 others(43): Show c.-286-54458_-286-54457insTATATATATATATATATACACA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	7/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9976689	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0026 a0001c0007t0026	a0001c0007t0026g0034 a0001c0007t0026g0034	1	34	0.0294	22	c.-47 others(43): Show c.-471-38101_-471-38080dupTTTTTTTTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10031647	T T	TATATATA others(15): Show TATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0021 a0001c0008t0021	a0001c0008t0021g0002 a0001c0008t0021g0002	1	34	0.0294	22	c.-47 others(41): Show c.-472+2070_-472+2071insGTGTATATATATATATATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10103377	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01981.hp2 HG02257.hp1 HG01099.hp2 HG01981.hp2 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0002 a0001c0001t0019 a0001c0018t0004 a0001c0001t0002 a0001c0001t0019 a0001c0018t0004	a0001c0001t0002g0013 a0001c0001t0019g0023 a0001c0018t0004g0020 a0001c0001t0002g0013 a0001c0001t0019g0023 a0001c0018t0004g0020	3	34	0.0882	22	c.-54 others(43): Show c.-544-69588_-544-69587insTATATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10103393	A A	ATATATAT others(15): Show ATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0025 a0001c0015t0025	a0001c0015t0025g0033 a0001c0015t0025g0033	1	34	0.0294	22	c.-54 others(43): Show c.-544-69604_-544-69603insCATATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10313397	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0022 a0001c0001t0013g0022	1	34	0.0294	22	c.-54 others(43): Show c.-545+27565_-545+27566insGTGTGTGTGTGTGTGTGTGTGT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10487966	G G	GTCTCTCT others(15): Show GTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02559.hp2 NA19030.hp1 HG02559.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0024 a0001c0006t0001 a0001c0001t0024 a0001c0006t0001	a0001c0001t0024g0032 a0001c0006t0001g0019 a0001c0001t0024g0032 a0001c0006t0001g0019	2	34	0.0588	22	c.-60 others(45): Show c.-600+124410_-600+124431dupGAGAGAGAGAGAGAGAGAGAGA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10504115	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0016 a0001c0013t0016	a0001c0013t0016g0028 a0001c0013t0016g0028	1	34	0.0294	22	c.-60 others(45): Show c.-600+108261_-600+108282dupTTTTTTTTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10509557	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0016 a0001c0013t0016	a0001c0013t0016g0028 a0001c0013t0016g0028	1	34	0.0294	22	c.-60 others(45): Show c.-600+102819_-600+102840dupTATATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10523601	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01243.hp1 HG02559.hp1 others(9): Show HG01109.hp2 HG01243.hp1 HG02559.hp1 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 NA19030.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0012 a0001c0013 a0001c0017	a0001c0001t0001 a0001c0001t0013 a0001c0002t0003 others(9): Show a0001c0001t0001 a0001c0001t0013 a0001c0002t0003 a0001c0002t0005 a0001c0003t0004 a0001c0003t0007 a0001c0004t0003 a0001c0004t0018 a0001c0007t0026 a0001c0012t0005 a0001c0013t0016 a0001c0017t0002	a0001c0001t0001g0004 a0001c0001t0013g0022 a0001c0002t0003g0024 others(9): Show a0001c0001t0001g0004 a0001c0001t0013g0022 a0001c0002t0003g0024 a0001c0002t0005g0025 a0001c0003t0004g0027 a0001c0003t0007g0029 a0001c0004t0003g0001 a0001c0004t0018g0015 a0001c0007t0026g0034 a0001c0012t0005g0021 a0001c0013t0016g0028 a0001c0017t0002g0005	12	34	0.3529	22	c.-60 others(43): Show c.-600+88775_-600+88796dupTATATATATATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10523622	T T	TATATATA others(15): Show TATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	34	0.0294	22	c.-60 others(43): Show c.-600+88775_-600+88776insGTATATATATATATATATATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRG_chr3_61556571_62302609	61600190	A A	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0001 a0001c0019t0001	a0001c0019t0001g0069 a0001c0019t0001g0069	1	94	0.0106	22	c.85+ others(39): Show c.85+37819_85+37820insGTGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61600192	A A	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0008 a0003c0004t0003g0008	1	94	0.0106	22	c.85+ others(39): Show c.85+37824_85+37845dupGTGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61621051	A A	ATATATAT others(15): Show ATATATATATATATATATGTGTG	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0075 a0002c0003t0002g0075	1	94	0.0106	22	c.85+ others(39): Show c.85+58680_85+58681insATATATATATATATATGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61621051	A A	ATATATAT others(15): Show ATATATATATGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0041	1	94	0.0106	22	c.85+ others(39): Show c.85+58680_85+58681insATATATATGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61676456	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 NA18522.hp1 NA18998.hp2 HG02896.hp1 NA18522.hp1 NA18998.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0016 a0002c0003t0002 a0001c0001t0016 a0002c0003t0002	a0001c0001t0016g0029 a0002c0003t0002g0052 a0002c0003t0002g0061 a0001c0001t0016g0029 a0002c0003t0002g0052 a0002c0003t0002g0061	3	94	0.0319	22	c.86- others(39): Show c.86-72404_86-72403insAAAAAAAAAAAAAAAAAAAAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61820603	G G	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp1 HG02647.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0001 a0001c0001t0002 a0001c0005t0001	a0001c0001t0002g0093 a0001c0005t0001g0014 a0001c0001t0002g0093 a0001c0005t0001g0014	2	94	0.0213	22	c.190 others(41): Show c.190+71626_190+71647dupTTTTTTTTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61833067	T T	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0021 a0002c0002t0002g0021	1	94	0.0106	22	c.190 others(41): Show c.190+84093_190+84114dupGTGTGTGTGTGTGTGTGTGTGT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61887123	C C	CATATATA others(15): Show CATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	94	0.0106	22	c.191 others(43): Show c.191-102475_191-102454dupATATATATATATATATATATAT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61956090	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0089 a0001c0001t0002g0089	1	94	0.0106	22	c.191 others(41): Show c.191-33518_191-33517insATATATATATATATATATATAT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02559.hp2 HG00280.hp2 HG02559.hp2	a0001 a0002 a0001 a0002	a0001c0015 a0002c0002 a0001c0015 a0002c0002	a0001c0015t0001 a0002c0002t0002 a0001c0015t0001 a0002c0002t0002	a0001c0015t0001g0011 a0002c0002t0002g0051 a0001c0015t0001g0011 a0002c0002t0002g0051	2	94	0.0213	22	c.265 others(41): Show c.2657-1505_2657-1484dupACACACACACACACACACACAC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TATACACA others(15): Show TATACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA19240.hp1 HG02109.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0004 a0001c0001t0006	a0001c0001t0004g0026 a0001c0001t0006g0036 a0001c0001t0004g0026 a0001c0001t0006g0036	2	94	0.0213	22	c.265 others(41): Show c.2657-1513_2657-1512insTACACACACACACACACACACA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29		INFO_REALIGN_3_PRIME	chr3	TogoVar

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