Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
OR3A2_chr17_3271177_3391308	3372847	A A	AGGAGAGG others(17): Show AGGAGAGGGAGAGGGAGAGGGAGAG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp2 HG02015.hp1 others(11): Show HG01109.hp2 HG01891.hp2 HG02015.hp1 HG02109.hp1 HG02293.hp2 HG02630.hp1 HG02647.hp2 HG02895.hp2 HG03453.hp2 HG03710.hp2 HG06807.hp1 NA18968.hp1 NA19002.hp1 NA19066.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0004c0008	a0001c0001t0002 a0001c0001t0027 a0001c0001t0028 others(4): Show a0001c0001t0002 a0001c0001t0027 a0001c0001t0028 a0001c0003t0001 a0001c0005t0002 a0002c0002t0006 a0004c0008t0001	a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0076 others(11): Show a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0027g0078 a0001c0001t0028g0069 a0001c0003t0001g0138 a0001c0003t0001g0162 a0001c0005t0002g0071 a0002c0002t0006g0111 a0004c0008t0001g0139 a0004c0008t0001g0163 a0004c0008t0001g0164	14	318	0.0440	24	c.-37 others(45): Show c.-377+13254_-377+13277dupCTCTCCCTCTCCCTCTCCCTCTCC	OR3A2	ENSG00000221882.5	transcript	ENST00000573901.3	protein_coding	1/4			chr17	TogoVar
OR4A5_chr11_54701832_54712902	54704720	T T	TTTTCTTT others(17): Show TTTTCTTTTCTTTTCTTTTCTTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(128): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00673.hp2 HG00735.hp2 HG00741.hp1 HG01081.hp1 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01516.hp1 HG01891.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02273.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02572.hp2 HG02602.hp2 HG02683.hp1 HG02683.hp2 HG02738.hp2 HG02895.hp1 HG02897.hp2 HG03540.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG04115.hp1 HG04228.hp2 NA18747.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp1 NA18952.hp2 NA18957.hp2 NA18960.hp1 NA18965.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18973.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19054.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19078.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA20805.hp1	a0001 a0006 a0010 others(4): Show a0001 a0006 a0010 a0012 a0013 a0015 a0016	a0001c0001 a0001c0020 a0006c0005 others(5): Show a0001c0001 a0001c0020 a0006c0005 a0010c0012 a0012c0015 a0013c0017 a0015c0019 a0016c0016	a0001c0001t0001 a0001c0020t0001 a0006c0005t0001 others(5): Show a0001c0001t0001 a0001c0020t0001 a0006c0005t0001 a0010c0012t0001 a0012c0015t0001 a0013c0017t0001 a0015c0019t0001 a0016c0016t0001	a0001c0001t0001g0000 a0001c0020t0001g0000 a0006c0005t0001g0000 others(5): Show a0001c0001t0001g0000 a0001c0020t0001g0000 a0006c0005t0001g0000 a0010c0012t0001g0000 a0012c0015t0001g0000 a0013c0017t0001g0000 a0015c0019t0001g0000 a0016c0016t0001g0000	131	466	0.2811	24	c.-21 others(35): Show c.-2165_-2164insTTTCTTTTCTTTTCTTTTCTTTTC	OR4A5	ENSG00000221840.4	transcript	ENST00000319760.8	protein_coding		2111		chr11	TogoVar
OR4E2_chr14_21648835_21672642	21670173	G G	GGAACAGT others(17): Show GGAACAGTGTAAATGCAGTGTCCCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0021 a0001c0003t0021	a0001c0003t0021g0251 a0001c0003t0021g0251	1	458	0.0022	24	c.41 others(35): Show c.4149_*4150insGAACAGTGTAAATGCAGTGTCCCA	OR4E2	ENSG00000221977.3	transcript	ENST00000641524.1	protein_coding		2532		chr14	TogoVar
OR4F17_chr19_102104_118156	107870	T T	TATATAAT others(17): Show TATATAATATAATATATATTATATA	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19012.hp2 NA19011.hp2 NA19012.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0010 a0002c0002t0001g0010	2	227	0.0088	24	c.-55 others(39): Show c.-55+331_-55+354dupTATTATATAATATAATATAATATA	OR4F17	ENSG00000176695.8	transcript	ENST00000585993.3	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
OR4F17_chr19_102104_118156	107889	T T	TATATAAT others(17): Show TATATAATATAATATAATATATATA	intron_variant intron_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0067 a0002c0002t0001g0067	1	227	0.0044	24	c.-55 others(39): Show c.-55+354_-55+355insTATAATATAATATAATATAATATA	OR4F17	ENSG00000176695.8	transcript	ENST00000585993.3	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
OR4F17_chr19_102104_118156	107894	A A	AATATATA others(17): Show AATATATATTATATAAATATAATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02132.hp2 HG01081.hp2 HG02132.hp2	a0003 a0003	a0003c0005 a0003c0006 a0003c0005 a0003c0006	a0003c0005t0004 a0003c0006t0004 a0003c0005t0004 a0003c0006t0004	a0003c0005t0004g0081 a0003c0006t0004g0080 a0003c0005t0004g0081 a0003c0006t0004g0080	2	227	0.0088	24	c.-55 others(39): Show c.-55+344_-55+345insTATTATATAAATATAATATATATA	OR4F17	ENSG00000176695.8	transcript	ENST00000585993.3	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
OR4F6_chr15_101798509_101811887	101802783	A A	ACTTCCTT others(17): Show ACTTCCTTCCTTCCTTCCTTCCTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp1 HG03195.hp2 HG03209.hp1 others(2): Show HG01361.hp1 HG03195.hp2 HG03209.hp1 HG03471.hp2 NA18945.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0004t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0004t0001g0001	5	372	0.0134	24	c.-79 others(33): Show c.-796_-795insCTTCCTTCCTTCCTTCCTTCCTTC	OR4F6	ENSG00000184140.6	transcript	ENST00000328882.6	protein_coding		725		chr15	TogoVar
OR4K2_chr14_19870142_19888932	19872713	T T	TTATATAT others(17): Show TTATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02922.hp2 HG01243.hp1 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0064 a0001c0001t0022 a0001c0001t0064	a0001c0001t0022g0005 a0001c0001t0064g0001 a0001c0001t0022g0005 a0001c0001t0064g0001	2	254	0.0079	24	c.-34 others(35): Show c.-3445_-3444insTATATATATATATATATATATATA	OR4K2	ENSG00000165762.3	transcript	ENST00000641885.1	protein_coding		2428		chr14	TogoVar
OR4K2_chr14_19870142_19888932	19872713	T T	TTTTATAT others(17): Show TTTTATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0002 a0001c0001t0049g0002	1	254	0.0039	24	c.-34 others(35): Show c.-3445_-3444insTTTATATATATATATATATATATA	OR4K2	ENSG00000165762.3	transcript	ENST00000641885.1	protein_coding		2428		chr14	TogoVar
OR4K5_chr14_19915607_19926578	19917169	A A	ATATGTGT others(17): Show ATATGTGTGTGTATATATATGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 NA18747.hp1 NA18950.hp1 others(4): Show HG00558.hp2 NA18747.hp1 NA18950.hp1 NA18963.hp1 NA18981.hp1 NA18991.hp2 NA19068.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	7	236	0.0297	24	c.-34 others(35): Show c.-3438_-3437insTATGTGTGTGTATATATATGTGTG	OR4K5	ENSG00000176281.5	transcript	ENST00000315915.5	protein_coding		3437		chr14	TogoVar
OR4M2B_chr15_21632909_21643992	21634742	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00609.hp2 HG00741.hp2 others(10): Show HG00423.hp1 HG00609.hp2 HG00741.hp2 HG02080.hp1 HG02257.hp1 HG02809.hp2 HG03017.hp2 HG03139.hp1 HG03195.hp2 HG03927.hp1 NA18945.hp1 NA18982.hp2 NA18999.hp2	a0004 a0005 a0006 a0004 a0005 a0006	a0004c0004 a0005c0006 a0006c0007 others(1): Show a0004c0004 a0005c0006 a0006c0007 a0006c0011	a0004c0004t0001 a0005c0006t0001 a0006c0007t0001 others(1): Show a0004c0004t0001 a0005c0006t0001 a0006c0007t0001 a0006c0011t0001	a0004c0004t0001g0000 a0005c0006t0001g0000 a0006c0007t0001g0000 others(1): Show a0004c0004t0001g0000 a0005c0006t0001g0000 a0006c0007t0001g0000 a0006c0011t0001g0000	13	215	0.0605	24	c.-32 others(35): Show c.-3265_-3264insATATATATATATATATATATATAT	OR4M2B	ENSG00000182974.3	transcript	ENST00000332663.3	protein_coding		3166		chr15	TogoVar
OR4M2_chr15_22075527_22086610	22084785	A A	ATATATAT others(17): Show ATATATATACACACATATATATATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0008 a0008	a0008c0007 a0008c0007	a0008c0007t0001 a0008c0007t0001	a0008c0007t0001g0000 a0008c0007t0001g0000	1	50	0.0200	24	c.32 others(35): Show c.3219_*3220insTATATATACACACATATATATATG	OR4M2	ENSG00000274102.3	transcript	ENST00000614722.3	protein_coding		3176		chr15	TogoVar
OR4N4C_chr15_21646844_21657968	21653406	A A	AATATATT others(17): Show AATATATTTTTATATATTTATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01928.hp1 HG01928.hp2 HG03654.hp1 others(12): Show HG01928.hp1 HG01928.hp2 HG03654.hp1 NA18939.hp1 NA18952.hp2 NA18962.hp2 NA18964.hp2 NA18969.hp2 NA18976.hp1 NA18982.hp2 NA18986.hp2 NA18992.hp1 NA19001.hp2 NA19011.hp1 NA19079.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0001c0004 a0011c0012 a0001c0001 a0001c0004 a0011c0012	a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 a0011c0012t0001	a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0004t0001g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0004t0001g0000 a0011c0012t0001g0000	15	216	0.0694	24	c.52 others(33): Show c.521_*522insATATATTTTTATATATTTATAAAT	OR4N4C	ENSG00000279408.3	transcript	ENST00000623441.1	protein_coding		439		chr15	TogoVar
OR4N4_chr15_22089522_22100862	22095998	A A	AATATATT others(17): Show AATATATTTTTATATATTTATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp2 HG02897.hp1 HG02970.hp2 others(4): Show HG02523.hp2 HG02897.hp1 HG02970.hp2 HG03704.hp2 NA19030.hp1 NA19030.hp2 NA19087.hp1	a0001 a0002 a0007 others(1): Show a0001 a0002 a0007 a0008	a0001c0001 a0002c0007 a0007c0009 others(1): Show a0001c0001 a0002c0007 a0007c0009 a0008c0010	a0001c0001t0001 a0002c0007t0002 a0007c0009t0001 others(1): Show a0001c0001t0001 a0002c0007t0002 a0007c0009t0001 a0008c0010t0001	a0001c0001t0001g0000 a0002c0007t0002g0000 a0007c0009t0001g0000 others(1): Show a0001c0001t0001g0000 a0002c0007t0002g0000 a0007c0009t0001g0000 a0008c0010t0001g0000	7	45	0.1556	24	c.52 others(33): Show c.526_*527insATATATTTTTATATATTTATAAAT	OR4N4	ENSG00000183706.6	transcript	ENST00000328795.6	protein_coding		137		chr15	TogoVar
OR4N4_chr15_22089522_22100862	22096002	T T	CATTTTTA others(17): Show CATTTTTATATATTTATAAATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp2 HG02145.hp2 HG01496.hp2 HG02145.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0000 a0001c0004t0004g0000	2	45	0.0444	24	c.52 others(33): Show c.529_*530insCATTTTTATATATTTATAAATATA	OR4N4	ENSG00000183706.6	transcript	ENST00000328795.6	protein_coding		140		chr15	TogoVar
OR4N4_chr15_22089522_22100862	22096058	T T	TATATTTA others(17): Show TATATTTATAAATATATATTTTTAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0005 a0001c0006t0005	a0001c0006t0005g0000 a0001c0006t0005g0000	1	45	0.0222	24	c.58 others(33): Show c.586_*587insATATTTATAAATATATATTTTTAC	OR4N4	ENSG00000183706.6	transcript	ENST00000328795.6	protein_coding		197		chr15	TogoVar
OR51A4_chr11_4937831_4952605	4942089	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp1 NA18959.hp1 NA18968.hp2 others(1): Show NA18941.hp1 NA18959.hp1 NA18968.hp2 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0008 a0002c0002t0001 a0002c0002t0008	a0002c0002t0001g0001 a0002c0002t0008g0009 a0002c0002t0001g0001 a0002c0002t0008g0009	4	446	0.0090	24	c.40 others(35): Show c.4069_*4070insTTTTTTTTTTTTTTTTTTTTTTTT	OR51A4	ENSG00000205497.5	transcript	ENST00000641898.1	protein_coding		741		chr11	TogoVar
OR51A4_chr11_4937831_4952605	4942110	A A	AAAAAAAA others(17): Show AAAAAAAAAAAAAAAAAAAAAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0006 a0001c0001t0006g0006	1	446	0.0022	24	c.40 others(35): Show c.4048_*4049insCTTTTTTTTTTTTTTTTTTTTTTT	OR51A4	ENSG00000205497.5	transcript	ENST00000641898.1	protein_coding		720		chr11	TogoVar
OR51A7_chr11_4898783_4914462	4907095	T T	TAAAAAAA others(17): Show TAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0070 a0002c0002t0002g0070	1	452	0.0022	24	c.-31 others(39): Show c.-31-224_-31-223insAAAAAAAAAAAAAAAAAAAAAAAA	OR51A7	ENSG00000176895.9	transcript	ENST00000641490.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr11	TogoVar
OR51F1_chr11_4763979_4774938	4766693	T T	TTCCCTCC others(17): Show TTCCCTCCCTCCCTCCCTCCCTCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	342	0.0029	24	c.22 others(35): Show c.2262_*2285dupGGGAGGGAGGGAGGGAGGGAGGGA	OR51F1	ENSG00000280021.3	transcript	ENST00000624103.2	protein_coding		2285		chr11	TogoVar
OR51F1_chr11_4763979_4774938	4766715	C C	CCCTCCCT others(17): Show CCCTCCCTCCCTCCCTCCCTCCCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0000 a0002c0007t0001g0000	1	342	0.0029	24	c.22 others(35): Show c.2263_*2264insAAGGGAGGGAGGGAGGGAGGGAGG	OR51F1	ENSG00000280021.3	transcript	ENST00000624103.2	protein_coding		2263		chr11	TogoVar
OR51L1_chr11_4989851_5010536	4996721	T T	TTTTCTTT others(17): Show TTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01358.hp1 HG02647.hp1 others(2): Show HG00673.hp2 HG01358.hp1 HG02647.hp1 NA19056.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0011 a0001c0001t0002 a0001c0002t0001 a0001c0002t0011	a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0002t0001g0056 others(1): Show a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0002t0001g0056 a0001c0002t0011g0080	5	470	0.0106	24	c.-26 others(41): Show c.-261-736_-261-713dupTTTCTTTCTTTCTTTCTTTCTTTC	OR51L1	ENSG00000176798.3	transcript	ENST00000641819.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
OR52N1_chr11_5781471_5796265	5794426	C C	CTCTATAT others(17): Show CTCTATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0009 a0002c0002t0004g0009	1	418	0.0024	24	c.-33 others(35): Show c.-3361_-3360insTATATATATATATATATATATAGA	OR52N1	ENSG00000181001.3	transcript	ENST00000641645.1	protein_coding		3162		chr11	TogoVar
OR52N1_chr11_5781471_5796265	5794426	C C	CTCTCTCT others(17): Show CTCTCTCTCTCTCTCTCTCTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	418	0.0024	24	c.-33 others(35): Show c.-3361_-3360insTATATAGAGAGAGAGAGAGAGAGA	OR52N1	ENSG00000181001.3	transcript	ENST00000641645.1	protein_coding		3162		chr11	TogoVar
OR52N1_chr11_5781471_5796265	5794426	C C	CTCTCTCT others(17): Show CTCTCTCTCTCTCTCTCTCTCTCTA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0002	1	418	0.0024	24	c.-33 others(35): Show c.-3361_-3360insTAGAGAGAGAGAGAGAGAGAGAGA	OR52N1	ENSG00000181001.3	transcript	ENST00000641645.1	protein_coding		3162		chr11	TogoVar
OR56A4_chr11_5994445_6011946	6011202	T T	TTATATAC others(17): Show TTATATACATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0032 a0002c0002t0032	a0002c0002t0032g0107 a0002c0002t0032g0107	1	470	0.0021	24	c.-44 others(35): Show c.-4477_-4476insTATATATATATATATATGTATATA	OR56A4	ENSG00000183389.5	transcript	ENST00000641156.1	protein_coding		4257		chr11	TogoVar
OR5AS1_chr11_56022654_56043191	56039648	T T	TATATATA others(17): Show TATATATATATATATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG01074.hp2 HG01167.hp2 others(33): Show HG00438.hp1 HG01074.hp2 HG01167.hp2 HG01168.hp2 HG01255.hp1 HG01255.hp2 HG01433.hp1 HG01516.hp2 HG02523.hp2 HG02886.hp2 HG03225.hp2 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03710.hp1 HG03942.hp1 HG04204.hp1 NA18973.hp2 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18986.hp1 NA19001.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19054.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19068.hp1 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA20805.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0013 a0001c0001 a0010c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0016 a0001c0001t0020 a0001c0001t0035 a0001c0001t0040 a0001c0001t0055 a0001c0001t0059 a0010c0013t0003	a0001c0001t0001g0001 a0001c0001t0001g0021 a0001c0001t0003g0002 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0021 a0001c0001t0003g0002 a0001c0001t0006g0002 a0001c0001t0006g0031 a0001c0001t0016g0002 a0001c0001t0020g0002 a0001c0001t0035g0002 a0001c0001t0040g0002 a0001c0001t0055g0002 a0001c0001t0059g0001 a0010c0013t0003g0002	36	432	0.0833	24	c.82 others(35): Show c.8255_*8256insATATATATATATATATATATATAC	OR5AS1	ENSG00000181785.3	transcript	ENST00000641320.1	protein_coding		1458		chr11	TogoVar
OR5B3_chr11_58397464_58411874	58410280	T T	TTTCCTTC others(17): Show TTTCCTTCCTTCCTTCCTTCCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01496.hp1 HG02486.hp1 HG06807.hp1 others(3): Show HG01496.hp1 HG02486.hp1 HG06807.hp1 NA18985.hp2 NA19005.hp1 NA19065.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0001 a0001c0001t0001 a0004c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0010 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0010 a0004c0004t0001g0013 a0004c0004t0001g0015	6	386	0.0155	24	c.-35 others(35): Show c.-3507_-3506insGGAAGGAAGGAAGGAAGGAAGGAA	OR5B3	ENSG00000172769.4	transcript	ENST00000641865.1	protein_coding		3407		chr11	TogoVar
OR5C1_chr9_122783933_122794895	122786925	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	442	0.0023	24	c.-20 others(35): Show c.-2008_-2007insATATATATATATATATATATATAT	OR5C1	ENSG00000148215.4	transcript	ENST00000373680.3	protein_coding		2007		chr9	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATAGA others(17): Show TATATAGAGAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp1 NA18939.hp1 HG04204.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	434	0.0046	24	c.26 others(35): Show c.2675_*2676insATATAGAGAGAGAGAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATAGAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp2 HG01433.hp2 HG01943.hp2 others(1): Show HG01256.hp2 HG01433.hp2 HG01943.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	4	434	0.0092	24	c.26 others(35): Show c.2675_*2676insATATATAGAGAGAGAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATATAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	434	0.0023	24	c.26 others(35): Show c.2675_*2676insATATATATAGAGAGAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATATATAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG01123.hp2 HG03834.hp1 others(2): Show HG00438.hp2 HG01123.hp2 HG03834.hp1 NA18960.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	5	434	0.0115	24	c.26 others(35): Show c.2675_*2676insATATATATATAGAGAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATATATATAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19057.hp1 NA19083.hp2 NA19057.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	434	0.0046	24	c.26 others(35): Show c.2675_*2676insATATATATATATAGAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATATATATATAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	434	0.0023	24	c.26 others(35): Show c.2675_*2676insATATATATATATATAGAGAGAGAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55823246	T T	TATATATA others(17): Show TATATATATATATATATATATATAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02683.hp1 HG02809.hp1 HG02683.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	434	0.0046	24	c.26 others(35): Show c.2675_*2676insATATATATATATATATATATATAG	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		2676		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATAGA others(17): Show TATATAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 NA18939.hp1 HG04204.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	448	0.0045	24	c.-39 others(35): Show c.-3973_-3972insATATAGAGAGAGAGAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp2 HG01433.hp2 HG01943.hp1 others(2): Show HG01256.hp2 HG01433.hp2 HG01943.hp1 HG02055.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	5	448	0.0112	24	c.-39 others(35): Show c.-3973_-3972insATATATAGAGAGAGAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATATAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	448	0.0022	24	c.-39 others(35): Show c.-3973_-3972insATATATATAGAGAGAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATATATAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG01123.hp1 HG01256.hp1 others(2): Show HG00438.hp1 HG01123.hp1 HG01256.hp1 NA18960.hp2 NA19010.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0011 a0001c0001 a0009c0011	a0001c0001t0001 a0009c0011t0001 a0001c0001t0001 a0009c0011t0001	a0001c0001t0001g0000 a0009c0011t0001g0000 a0001c0001t0001g0000 a0009c0011t0001g0000	5	448	0.0112	24	c.-39 others(35): Show c.-3973_-3972insATATATATATAGAGAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATATATATAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19057.hp1 NA19083.hp2 NA19057.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	448	0.0045	24	c.-39 others(35): Show c.-3973_-3972insATATATATATATAGAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATATATATATAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0000 a0001c0007t0001g0000	1	448	0.0022	24	c.-39 others(35): Show c.-3973_-3972insATATATATATATATAGAGAGAGAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5L2_chr11_55822219_55833154	55823246	T T	TATATATA others(17): Show TATATATATATATATATATATATAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp1 HG02809.hp1 HG02683.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	448	0.0045	24	c.-39 others(35): Show c.-3973_-3972insATATATATATATATATATATATAG	OR5L2	ENSG00000205030.1	transcript	ENST00000378397.1	protein_coding		3972		chr11	TogoVar
OR5M11_chr11_56537340_56548257	56543547	C C	CATCTATC others(17): Show CATCTATCTATCTATCTATCTATCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG02165.hp1 NA18942.hp1 others(2): Show HG00558.hp2 HG02165.hp1 NA18942.hp1 NA18954.hp1 NA19010.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0000 a0002c0002t0001g0000 a0001c0001t0001g0000 a0002c0002t0001g0000	5	428	0.0117	24	c.-29 others(33): Show c.-291_-290insAGATAGATAGATAGATAGATAGAT	OR5M11	ENSG00000255223.5	transcript	ENST00000528616.5	protein_coding		291		chr11	TogoVar
OR5M11_chr11_56537340_56548257	56543574	C C	CTATCTAT others(17): Show CTATCTATCTATCTATCTATCTATT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	428	0.0023	24	c.-31 others(33): Show c.-318_-317insAATAGATAGATAGATAGATAGATA	OR5M11	ENSG00000255223.5	transcript	ENST00000528616.5	protein_coding		318		chr11	TogoVar
OR5T3_chr11_56247254_56258222	56255816	A A	AACACACA others(17): Show AACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 NA19063.hp1 HG02451.hp2 NA19063.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0000 a0002c0002t0001g0000 a0001c0001t0001g0000 a0002c0002t0001g0000	2	371	0.0054	24	c.25 others(35): Show c.2594_*2595insACACACACACACACACACACACAC	OR5T3	ENSG00000172489.7	transcript	ENST00000313033.4	protein_coding		2595		chr11	TogoVar
OR5V1_chr6_29348749_29373865	29364797	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01943.hp1 NA18978.hp2 others(2): Show HG01167.hp2 HG01943.hp1 NA18978.hp2 NA19065.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0034 a0001c0001t0003g0106 a0001c0001t0003g0113 others(1): Show a0001c0001t0003g0034 a0001c0001t0003g0106 a0001c0001t0003g0113 a0001c0001t0003g0114	5	427	0.0117	24	c.-83 others(41): Show c.-83+3811_-83+3834dupTTTTTTTTTTTTTTTTTTTTTTTT	OR5V1	ENSG00000243729.5	transcript	ENST00000641768.1	protein_coding	1/1			chr6	TogoVar
OR6A2_chr11_6786736_6804689	6788907	A A	AAAATAAA others(17): Show AAAATAAATAAATAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0004 a0001c0003t0003g0004	1	460	0.0022	24	c.57 others(35): Show c.5794_*5817dupATTTATTTATTTATTTATTTATTT	OR6A2	ENSG00000184933.6	transcript	ENST00000641196.1	protein_coding		2828		chr11	TogoVar
OR6J1_chr14_22625929_22649352	22636225	G G	GCCCTCTC others(17): Show GCCCTCTCCCTCTCCCTCTCCCTCT	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG04115.hp1 NA19064.hp1 HG01943.hp2 HG04115.hp1 NA19064.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0013 a0002c0002t0002g0200 a0002c0002t0002g0241 a0002c0002t0002g0013 a0002c0002t0002g0200 a0002c0002t0002g0241	3	362	0.0083	24	c.-27 others(41): Show c.-27-1411_-27-1388dupAGAGGGAGAGGGAGAGGGAGAGGG	OR6J1	ENSG00000255804.2	transcript	ENST00000540461.2	protein_coding	1/1			chr14	TogoVar
OR6J1_chr14_22625929_22649352	22636430	C C	CTCTCCCT others(17): Show CTCTCCCTCTCCGTCTCCCTCTCCG	intron_variant intron_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0283 a0001c0001t0006g0283	1	362	0.0028	24	c.-27 others(41): Show c.-27-1593_-27-1592insCGGAGAGGGAGACGGAGAGGGAGA	OR6J1	ENSG00000255804.2	transcript	ENST00000540461.2	protein_coding	1/1			chr14	TogoVar

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