Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SHQ1_chr3_72744277_72853445	72852106	C C	CTCTCTCT others(17): Show CTCTCTCTCTCTCTCTCTCTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0202 a0002c0002t0001g0202	1	136	0.0074	24	c.-37 others(35): Show c.-3767_-3766insTATATAGAGAGAGAGAGAGAGAGA	SHQ1	ENSG00000144736.14	transcript	ENST00000325599.13	protein_coding		3662		chr3	TogoVar
SHROOM2_chrX_9781429_9954443	9784504	C C	CGCTGATT others(17): Show CGCTGATTGGTCCATTTTACAGAGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(157): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18979.hp1 NA18982.hp1 NA18989.hp1 NA19002.hp2 NA19005.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(31): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0013 a0016 a0017 a0020 a0021 a0022 a0023 a0025 a0027 a0028 a0029 a0030 a0032 a0033 a0035 a0037 a0038 a0039 a0040 a0042 a0044 a0045 a0046	a0001c0001 a0001c0003 a0001c0007 others(54): Show a0001c0001 a0001c0003 a0001c0007 a0001c0012 a0001c0013 a0001c0034 a0001c0048 a0002c0002 a0002c0006 a0002c0010 a0002c0011 a0002c0014 a0002c0017 a0002c0019 a0002c0047 a0002c0049 a0003c0004 a0003c0005 a0003c0008 a0003c0009 a0004c0016 a0004c0024 a0004c0065 a0005c0023 a0005c0058 a0006c0018 a0006c0040 a0007c0015 a0008c0025 a0009c0020 a0010c0053 a0010c0054 a0011c0052 a0011c0071 a0013c0050 a0016c0029 a0017c0028 a0020c0060 a0021c0038 a0022c0064 a0023c0059 a0025c0072 a0027c0070 a0028c0061 a0029c0055 a0030c0075 a0032c0056 a0033c0037 a0035c0033 a0037c0044 a0038c0031 a0039c0066 a0040c0042 a0042c0046 a0044c0051 a0045c0073 a0046c0062	a0001c0001t0001 a0001c0001t0012 a0001c0001t0015 others(70): Show a0001c0001t0001 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0003t0001 a0001c0003t0013 a0001c0007t0001 a0001c0012t0001 a0001c0013t0001 a0001c0034t0001 a0001c0048t0001 a0002c0002t0002 a0002c0006t0002 a0002c0006t0003 a0002c0010t0003 a0002c0010t0005 a0002c0010t0008 a0002c0011t0002 a0002c0011t0005 a0002c0014t0002 a0002c0014t0023 a0002c0017t0002 a0002c0017t0007 a0002c0019t0006 a0002c0047t0002 a0002c0049t0002 a0003c0004t0002 a0003c0004t0003 a0003c0004t0004 a0003c0005t0003 a0003c0005t0004 a0003c0008t0003 a0003c0008t0004 a0003c0009t0003 a0003c0009t0004 a0004c0016t0002 a0004c0024t0007 a0004c0065t0010 a0005c0023t0003 a0005c0058t0002 a0006c0018t0006 a0006c0040t0003 a0007c0015t0003 a0008c0025t0002 a0009c0020t0004 a0010c0053t0002 a0010c0054t0002 a0011c0052t0005 a0011c0071t0003 a0013c0050t0001 a0016c0029t0007 a0017c0028t0001 a0020c0060t0002 a0021c0038t0001 a0022c0064t0003 a0023c0059t0001 a0025c0072t0002 a0027c0070t0010 a0028c0061t0001 a0029c0055t0001 a0030c0075t0001 a0032c0056t0008 a0033c0037t0014 a0035c0033t0002 a0037c0044t0002 a0038c0031t0001 a0039c0066t0019 a0040c0042t0003 a0042c0046t0003 a0044c0051t0001 a0045c0073t0001 a0046c0062t0002	a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0111 others(157): Show a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0153 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0229 a0001c0001t0001g0240 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0012g0115 a0001c0001t0015g0225 a0001c0001t0016g0228 a0001c0001t0018g0164 a0001c0003t0001g0104 a0001c0003t0001g0108 a0001c0003t0001g0125 a0001c0003t0001g0129 a0001c0003t0001g0130 a0001c0003t0001g0131 a0001c0003t0001g0148 a0001c0003t0001g0151 a0001c0003t0001g0159 a0001c0003t0001g0171 a0001c0003t0001g0186 a0001c0003t0001g0197 a0001c0003t0001g0214 a0001c0003t0013g0102 a0001c0007t0001g0002 a0001c0007t0001g0008 a0001c0007t0001g0110 a0001c0007t0001g0213 a0001c0012t0001g0158 a0001c0012t0001g0163 a0001c0013t0001g0112 a0001c0013t0001g0182 a0001c0034t0001g0206 a0001c0048t0001g0170 a0002c0002t0002g0103 a0002c0002t0002g0121 a0002c0002t0002g0123 a0002c0002t0002g0127 a0002c0002t0002g0141 a0002c0002t0002g0144 a0002c0002t0002g0190 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0234 a0002c0002t0002g0245 a0002c0002t0002g0256 a0002c0006t0002g0120 a0002c0006t0002g0124 a0002c0006t0002g0149 a0002c0006t0002g0188 a0002c0006t0002g0241 a0002c0006t0003g0005 a0002c0010t0003g0232 a0002c0010t0005g0243 a0002c0010t0008g0010 a0002c0011t0002g0101 a0002c0011t0005g0222 a0002c0014t0002g0105 a0002c0014t0002g0195 a0002c0014t0023g0201 a0002c0017t0002g0140 a0002c0017t0002g0161 a0002c0017t0007g0009 a0002c0019t0006g0198 a0002c0019t0006g0227 a0002c0047t0002g0156 a0002c0049t0002g0143 a0003c0004t0002g0155 a0003c0004t0003g0107 a0003c0004t0003g0116 a0003c0004t0003g0126 a0003c0004t0003g0142 a0003c0004t0003g0162 a0003c0004t0003g0166 a0003c0004t0003g0177 a0003c0004t0003g0180 a0003c0004t0004g0196 a0003c0005t0003g0152 a0003c0005t0003g0160 a0003c0005t0003g0168 a0003c0005t0003g0169 a0003c0005t0003g0172 a0003c0005t0003g0173 a0003c0005t0004g0147 a0003c0008t0003g0194 a0003c0008t0003g0251 a0003c0008t0004g0204 a0003c0008t0004g0210 a0003c0008t0004g0212 a0003c0009t0003g0154 a0003c0009t0004g0242 a0004c0016t0002g0230 a0004c0024t0007g0255 a0004c0065t0010g0233 a0005c0023t0003g0191 a0005c0058t0002g0118 a0006c0018t0006g0145 a0006c0040t0003g0247 a0007c0015t0003g0189 a0007c0015t0003g0192 a0008c0025t0002g0012 a0008c0025t0002g0013 a0009c0020t0004g0239 a0009c0020t0004g0250 a0010c0053t0002g0246 a0010c0054t0002g0011 a0011c0052t0005g0136 a0011c0071t0003g0202 a0013c0050t0001g0178 a0016c0029t0007g0237 a0017c0028t0001g0139 a0020c0060t0002g0244 a0021c0038t0001g0134 a0022c0064t0003g0119 a0023c0059t0001g0157 a0025c0072t0002g0236 a0027c0070t0010g0248 a0028c0061t0001g0205 a0029c0055t0001g0238 a0030c0075t0001g0146 a0032c0056t0008g0138 a0033c0037t0014g0231 a0035c0033t0002g0006 a0037c0044t0002g0209 a0038c0031t0001g0007 a0039c0066t0019g0184 a0040c0042t0003g0137 a0042c0046t0003g0187 a0044c0051t0001g0252 a0045c0073t0001g0249 a0046c0062t0002g0226	160	253	0.6324	24	c.-20 others(35): Show c.-2042_-2041insGCTGATTGGTCCATTTTACAGAGT	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding		1924		chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9784508	G G	GATTGGTC others(17): Show GATTGGTCCATTTTACAGAGTGCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG06807.hp1 HG03209.hp1 HG06807.hp1	a0004 a0036 a0004 a0036	a0004c0016 a0036c0074 a0004c0016 a0036c0074	a0004c0016t0011 a0036c0074t0003 a0004c0016t0011 a0036c0074t0003	a0004c0016t0011g0175 a0036c0074t0003g0176 a0004c0016t0011g0175 a0036c0074t0003g0176	2	254	0.0079	24	c.-20 others(35): Show c.-2038_-2037insATTGGTCCATTTTACAGAGTGCTC	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding		1920		chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9815571	C C	CCTATATC others(17): Show CCTATATCTATATCTATATCTATAT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01346.hp1 others(5): Show HG01070.hp2 HG01071.hp1 HG01346.hp1 NA18944.hp1 NA19063.hp1 NA19066.hp1 NA19067.hp1 NA19088.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0012 a0002c0047 others(3): Show a0001c0001 a0001c0012 a0002c0047 a0002c0049 a0003c0004 a0008c0025	a0001c0001t0001 a0001c0012t0017 a0002c0047t0002 others(3): Show a0001c0001t0001 a0001c0012t0017 a0002c0047t0002 a0002c0049t0002 a0003c0004t0003 a0008c0025t0002	a0001c0001t0001g0174 a0001c0012t0017g0062 a0002c0047t0002g0156 others(5): Show a0001c0001t0001g0174 a0001c0012t0017g0062 a0002c0047t0002g0156 a0002c0049t0002g0143 a0003c0004t0003g0077 a0003c0004t0003g0166 a0008c0025t0002g0012 a0008c0025t0002g0013	8	115	0.0696	24	c.165 others(43): Show c.165+28873_165+28896dupTCTATATCTATATCTATATCTATA	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9816580	C C	CCTGCTGC others(17): Show CCTGCTGCTGCTGCTGCTGCTGCTG	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA19056.hp1 HG00408.hp1 NA19056.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0009 a0001c0001 a0003c0009	a0001c0001t0001 a0003c0009t0003 a0001c0001t0001 a0003c0009t0003	a0001c0001t0001g0089 a0003c0009t0003g0154 a0001c0001t0001g0089 a0003c0009t0003g0154	2	61	0.0328	24	c.165 others(43): Show c.165+29879_165+29902dupGCTGCTGCTGCTGCTGCTGCTGCT	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9875080	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02523.hp1 HG01070.hp1 HG02523.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0015 a0001c0001 a0007c0015	a0001c0001t0001 a0007c0015t0003 a0001c0001t0001 a0007c0015t0003	a0001c0001t0001g0185 a0007c0015t0003g0192 a0001c0001t0001g0185 a0007c0015t0003g0192	2	12	0.1667	24	c.317 others(41): Show c.317+1284_317+1307dupAAAAAAAAAAAAAAAAAAAAAAAA	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	2/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9908944	A A	AAAATAAA others(17): Show AAAATAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02135.hp1 NA18940.hp1 others(5): Show HG02132.hp1 HG02135.hp1 NA18940.hp1 NA18969.hp1 NA19010.hp2 NA19064.hp1 NA19091.hp1 NA20752.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0002c0006 a0012c0021	a0001c0001t0001 a0001c0003t0001 a0001c0003t0013 others(3): Show a0001c0001t0001 a0001c0003t0001 a0001c0003t0013 a0002c0002t0002 a0002c0006t0002 a0012c0021t0001	a0001c0001t0001g0037 a0001c0001t0001g0150 a0001c0003t0001g0197 others(5): Show a0001c0001t0001g0037 a0001c0001t0001g0150 a0001c0003t0001g0197 a0001c0003t0013g0102 a0002c0002t0002g0063 a0002c0006t0002g0014 a0002c0006t0002g0188 a0012c0021t0001g0085	8	147	0.0544	24	c.289 others(45): Show c.2891+10662_2891+10685dupTAAATAAATAAATAAATAAATAAA	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM3_chr4_76430229_76788253	76605956	T T	TATATACA others(17): Show TATATACATATATATACACATATAC	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA18522.hp1 HG03486.hp1 NA18522.hp1	a0011 a0013 a0011 a0013	a0011c0037 a0013c0012 a0011c0037 a0013c0012	a0011c0037t0017 a0013c0012t0006 a0011c0037t0017 a0013c0012t0006	a0011c0037t0017g0176 a0013c0012t0006g0083 a0011c0037t0017g0176 a0013c0012t0006g0083	2	216	0.0093	24	c.323 others(43): Show c.323+50195_323+50218dupTATACATATATATACACATATACA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76646225	A A	AATAAATA others(17): Show AATAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03491.hp1 HG03492.hp2 others(5): Show HG03209.hp2 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG04115.hp1 HG04228.hp1 NA18964.hp1 NA19091.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0014	a0001c0015 a0001c0019 a0002c0003 others(2): Show a0001c0015 a0001c0019 a0002c0003 a0003c0002 a0014c0016	a0001c0015t0009 a0001c0019t0001 a0002c0003t0001 others(3): Show a0001c0015t0009 a0001c0019t0001 a0002c0003t0001 a0003c0002t0003 a0003c0002t0010 a0014c0016t0010	a0001c0015t0009g0111 a0001c0019t0001g0030 a0002c0003t0001g0096 others(5): Show a0001c0015t0009g0111 a0001c0019t0001g0030 a0002c0003t0001g0096 a0002c0003t0001g0172 a0003c0002t0003g0199 a0003c0002t0003g0200 a0003c0002t0010g0215 a0014c0016t0010g0160	8	38	0.2105	24	c.324 others(43): Show c.324-63928_324-63927insAATATATATATATATATATATATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76646225	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0003 a0003c0002t0003	a0003c0002t0003g0209 a0003c0002t0003g0209	1	31	0.0323	24	c.324 others(43): Show c.324-63908_324-63907insTATATATATATATATATATATATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76681625	G G	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTGTGTATGTA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01928.hp2 HG02572.hp2 others(10): Show HG00673.hp2 HG01928.hp2 HG02572.hp2 HG04204.hp2 NA18747.hp1 NA18968.hp2 NA18971.hp2 NA18979.hp2 NA18980.hp1 NA19010.hp1 NA19077.hp2 NA19084.hp2 NA20805.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0025 a0032	a0001c0001 a0002c0003 a0003c0002 others(3): Show a0001c0001 a0002c0003 a0003c0002 a0004c0004 a0025c0047 a0032c0051	a0001c0001t0002 a0002c0003t0001 a0003c0002t0001 others(3): Show a0001c0001t0002 a0002c0003t0001 a0003c0002t0001 a0004c0004t0001 a0025c0047t0002 a0032c0051t0028	a0001c0001t0002g0023 a0001c0001t0002g0110 a0001c0001t0002g0112 others(10): Show a0001c0001t0002g0023 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0002g0142 a0001c0001t0002g0147 a0001c0001t0002g0161 a0001c0001t0002g0165 a0001c0001t0002g0167 a0002c0003t0001g0123 a0003c0002t0001g0100 a0004c0004t0001g0029 a0025c0047t0002g0076 a0032c0051t0028g0004	13	41	0.3171	24	c.324 others(43): Show c.324-28522_324-28521insGTGTGTGTGTATGTATGTGTGTGT	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76704205	T T	TCCTATGA others(17): Show TCCTATGATTCATTCAGCAAATATG	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0140 a0001c0001t0002g0140	1	216	0.0046	24	c.324 others(41): Show c.324-5949_324-5926dupCTATGATTCATTCAGCAAATATGC	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76735868	A A	AAAAAAAA others(17): Show AAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0086 a0003c0002t0001g0086	1	150	0.0067	24	c.588 others(41): Show c.588-2892_588-2891insAAAAAATATATATATATATATATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76735868	A A	AAAATATA others(17): Show AAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0027 a0027	a0027c0029 a0027c0029	a0027c0029t0003 a0027c0029t0003	a0027c0029t0003g0190 a0027c0029t0003g0190	1	150	0.0067	24	c.588 others(41): Show c.588-2892_588-2891insAATATATATATATATATATATATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76735868	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0116 a0003c0002t0001g0116	1	150	0.0067	24	c.588 others(41): Show c.588-2880_588-2857dupATATATATATATATATATATATAT	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM4_chrX_50581796_50819194	50610352	T T	TCTCTCTC others(17): Show TCTCTCTCTCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0126 a0003c0004t0006g0126	1	101	0.0099	24	c.295 others(43): Show c.2958-2169_2958-2168insTGTGTGTGTGTGTGTGAGAGAGAG	SHROOM4	ENSG00000158352.18	transcript	ENST00000376020.9	protein_coding	5/8			chrX	TogoVar
SHROOM4_chrX_50581796_50819194	50610352	T T	TCTCTCTC others(17): Show TCTCTCTCTCTCACACACACACACA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0005 a0005c0006t0005	a0005c0006t0005g0100 a0005c0006t0005g0100	1	101	0.0099	24	c.295 others(43): Show c.2958-2169_2958-2168insTGTGTGTGTGTGTGAGAGAGAGAG	SHROOM4	ENSG00000158352.18	transcript	ENST00000376020.9	protein_coding	5/8			chrX	TogoVar
SHROOM4_chrX_50581796_50819194	50618277	C C	CTCCTTCC others(17): Show CTCCTTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00609.hp1 HG01074.hp1 others(6): Show HG00408.hp1 HG00609.hp1 HG01074.hp1 HG02027.hp1 HG02300.hp1 NA18612.hp1 NA18967.hp1 NA18989.hp1 NA18990.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0006c0007t0001	a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0065 others(6): Show a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0065 a0001c0001t0001g0122 a0001c0001t0001g0146 a0001c0001t0003g0133 a0001c0001t0003g0154 a0001c0001t0009g0074 a0006c0007t0001g0077	9	49	0.1837	24	c.295 others(43): Show c.2957+9336_2957+9337insAGGAAGGAAGGAAGGAAGGAAGGA	SHROOM4	ENSG00000158352.18	transcript	ENST00000376020.9	protein_coding	5/8			chrX	TogoVar
SHROOM4_chrX_50581796_50819194	50618278	C C	CCCTTCCT others(17): Show CCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02280.hp2 HG01243.hp1 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0063 a0001c0001t0002g0057 a0001c0001t0001g0063 a0001c0001t0002g0057	2	75	0.0267	24	c.295 others(43): Show c.2957+9312_2957+9335dupAAGGAAGGAAGGAAGGAAGGAAGG	SHROOM4	ENSG00000158352.18	transcript	ENST00000376020.9	protein_coding	5/8			chrX	TogoVar
SHROOM4_chrX_50581796_50819194	50723393	G G	GGAGGGAG others(17): Show GGAGGGAGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0016 a0016	a0016c0011 a0016c0011	a0016c0011t0030 a0016c0011t0030	a0016c0011t0030g0002 a0016c0011t0030g0002	1	36	0.0278	24	c.118 others(43): Show c.118-27457_118-27456insTCTCTCTCTCTCTCTCTCTCCCTC	SHROOM4	ENSG00000158352.18	transcript	ENST00000376020.9	protein_coding	1/8			chrX	TogoVar
SHTN1_chr10_116876477_117010187	116893576	G G	GCACACAC others(17): Show GCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00639.hp1 HG00741.hp1 others(57): Show HG00438.hp2 HG00639.hp1 HG00741.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01981.hp1 HG01981.hp2 HG02040.hp1 HG02055.hp1 HG02080.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02572.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03225.hp1 HG03486.hp2 HG03491.hp1 HG03516.hp1 HG03579.hp2 HG03688.hp1 HG03710.hp2 NA18940.hp2 NA18951.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp2 NA18980.hp2 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18991.hp1 NA18999.hp1 NA19054.hp1 NA19066.hp1 NA19074.hp2 NA19081.hp2 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(15): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0001t0021 a0001c0001t0024 a0001c0001t0025 a0001c0001t0041 a0001c0001t0056 a0001c0002t0016 a0001c0002t0026 a0001c0003t0001	a0001c0001t0001g0002 a0001c0001t0001g0033 a0001c0001t0001g0039 others(53): Show a0001c0001t0001g0002 a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0135 a0001c0001t0001g0236 a0001c0001t0004g0004 a0001c0001t0004g0017 a0001c0001t0004g0134 a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0168 a0001c0001t0008g0007 a0001c0001t0008g0189 a0001c0001t0008g0232 a0001c0001t0009g0026 a0001c0001t0009g0027 a0001c0001t0010g0170 a0001c0001t0012g0051 a0001c0001t0012g0080 a0001c0001t0013g0176 a0001c0001t0014g0094 a0001c0001t0014g0095 a0001c0001t0014g0096 a0001c0001t0014g0131 a0001c0001t0018g0122 a0001c0001t0021g0057 a0001c0001t0021g0074 a0001c0001t0021g0078 a0001c0001t0024g0006 a0001c0001t0025g0152 a0001c0001t0041g0153 a0001c0001t0056g0032 a0001c0002t0016g0142 a0001c0002t0026g0140 a0001c0002t0026g0141 a0001c0003t0001g0101	60	61	0.9836	24	c.167 others(43): Show c.1674-7011_1674-7010insTGTGTGTGTGTGTGTGTGTGTGTG	SHTN1	ENSG00000187164.20	transcript	ENST00000355371.9	protein_coding	16/16			chr10	TogoVar
SHTN1_chr10_116876477_117010187	116893576	G G	GCGCACAC others(17): Show GCGCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18960.hp2 NA18961.hp1 NA18941.hp2 NA18960.hp2 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0055 a0001c0001t0001 a0001c0001t0055	a0001c0001t0001g0003 a0001c0001t0055g0052 a0001c0001t0001g0003 a0001c0001t0055g0052	3	4	0.7500	24	c.167 others(43): Show c.1674-7011_1674-7010insTGTGTGTGTGTGTGTGTGTGTGCG	SHTN1	ENSG00000187164.20	transcript	ENST00000355371.9	protein_coding	16/16			chr10	TogoVar
SHTN1_chr10_116876477_117010187	116946485	T T	TTTTATAT others(17): Show TTTTATATATAAATATATAAAATGA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0024 a0001c0001t0028g0024	1	23	0.0435	24	c.617 others(41): Show c.617-1491_617-1468dupTCATTTTATATATTTATATATAAA	SHTN1	ENSG00000187164.20	transcript	ENST00000355371.9	protein_coding	7/16			chr10	TogoVar
SHTN1_chr10_116876477_117010187	116946652	G G	GATTTATA others(17): Show GATTTATATATAAATATATAAAATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG04228.hp1 HG02145.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0110 a0001c0001t0006g0034 a0001c0001t0001g0110 a0001c0001t0006g0034	2	62	0.0323	24	c.617 others(41): Show c.617-1635_617-1634insTATTTTATATATTTATATATAAAT	SHTN1	ENSG00000187164.20	transcript	ENST00000355371.9	protein_coding	7/16			chr10	TogoVar
SIAE_chr11_124628113_124678739	124636481	A A	ACGCGCCT others(17): Show ACGCGCCTGATCTCATCTGATCTCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18984.hp1 NA19074.hp2 NA18984.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0027 a0001c0001t0014g0027	2	288	0.0069	24	c.44 others(33): Show c.446_*469dupCGAGATCAGATGAGATCAGGCGCG	SIAE	ENSG00000110013.13	transcript	ENST00000263593.8	protein_coding	10/10	469		chr11	TogoVar
SIAH3_chr13_45772242_45856753	45822520	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01069.hp1 HG01975.hp1 others(3): Show HG00423.hp2 HG01069.hp1 HG01975.hp1 HG02300.hp1 NA18969.hp2 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010 a0001c0001t0097	a0001c0001t0003g0303 a0001c0001t0004g0322 a0001c0001t0005g0075 others(3): Show a0001c0001t0003g0303 a0001c0001t0004g0322 a0001c0001t0005g0075 a0001c0001t0005g0091 a0001c0001t0010g0104 a0001c0001t0097g0088	6	18	0.3333	24	c.135 others(43): Show c.135+28951_135+28974dupATATATATATATATATATATATAT	SIAH3	ENSG00000215475.5	transcript	ENST00000400405.4	protein_coding	1/1			chr13	TogoVar
SIAH3_chr13_45772242_45856753	45843030	C C	CTGTGTGT others(17): Show CTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0244 a0001c0001t0001g0244	1	355	0.0028	24	c.135 others(41): Show c.135+8464_135+8465insCACACACACACACACACACACACA	SIAH3	ENSG00000215475.5	transcript	ENST00000400405.4	protein_coding	1/1			chr13	TogoVar
SIAH3_chr13_45772242_45856753	45843032	C C	CTGTGTGT others(17): Show CTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00438.hp1 others(42): Show HG00099.hp2 HG00408.hp1 HG00438.hp1 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG00733.hp1 HG00741.hp2 HG01099.hp1 HG01099.hp2 HG01168.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01433.hp1 HG01515.hp2 HG01517.hp2 HG01934.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02040.hp1 HG02074.hp2 HG02083.hp2 HG02293.hp1 HG02300.hp2 HG02683.hp2 HG03017.hp2 HG03239.hp2 HG03492.hp1 HG03704.hp1 HG04228.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18994.hp1 NA19001.hp2 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19058.hp1 NA19083.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0014 a0001c0001t0022 a0001c0001t0026 a0001c0001t0032 a0001c0001t0057 a0001c0001t0060 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0092 a0001c0001t0103 a0001c0003t0108 a0001c0004t0004	a0001c0001t0001g0054 a0001c0001t0001g0158 a0001c0001t0001g0166 others(42): Show a0001c0001t0001g0054 a0001c0001t0001g0158 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0196 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0263 a0001c0001t0001g0351 a0001c0001t0002g0163 a0001c0001t0002g0199 a0001c0001t0002g0257 a0001c0001t0003g0056 a0001c0001t0003g0172 a0001c0001t0003g0187 a0001c0001t0003g0349 a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0270 a0001c0001t0004g0271 a0001c0001t0004g0285 a0001c0001t0004g0322 a0001c0001t0005g0324 a0001c0001t0005g0333 a0001c0001t0007g0253 a0001c0001t0007g0254 a0001c0001t0007g0258 a0001c0001t0007g0266 a0001c0001t0008g0055 a0001c0001t0010g0155 a0001c0001t0014g0218 a0001c0001t0014g0219 a0001c0001t0022g0171 a0001c0001t0022g0186 a0001c0001t0026g0350 a0001c0001t0032g0213 a0001c0001t0057g0065 a0001c0001t0060g0194 a0001c0001t0072g0169 a0001c0001t0073g0272 a0001c0001t0074g0340 a0001c0001t0092g0164 a0001c0001t0103g0165 a0001c0003t0108g0207 a0001c0004t0004g0212	45	248	0.1815	24	c.135 others(41): Show c.135+8462_135+8463insCACACACACACACACACACACACA	SIAH3	ENSG00000215475.5	transcript	ENST00000400405.4	protein_coding	1/1			chr13	TogoVar
SIAH3_chr13_45772242_45856753	45843034	C C	CTGTGTGT others(17): Show CTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG03831.hp1 NA18974.hp1 others(1): Show HG02071.hp1 HG03831.hp1 NA18974.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0080 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0080 a0001c0001t0099	a0001c0001t0001g0185 a0001c0001t0002g0342 a0001c0001t0080g0160 others(1): Show a0001c0001t0001g0185 a0001c0001t0002g0342 a0001c0001t0080g0160 a0001c0001t0099g0189	4	77	0.0519	24	c.135 others(41): Show c.135+8437_135+8460dupCACACACACACACACACACACACA	SIAH3	ENSG00000215475.5	transcript	ENST00000400405.4	protein_coding	1/1			chr13	TogoVar
SIDT1_chr3_113527555_113634575	113571486	G G	GCACACAC others(17): Show GCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG04204.hp1 HG02135.hp1 HG04204.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0070 a0001c0002t0001g0201 a0001c0002t0001g0070 a0001c0002t0001g0201	2	37	0.0541	24	c.515 others(41): Show c.515+3777_515+3800dupCACACACACACACACACACACACA	SIDT1	ENSG00000072858.11	transcript	ENST00000264852.9	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SIGIRR_chr11_400716_419999	401785	G G	GGCTCCAC others(17): Show GGCTCCACTGACCCCGGCCCCGCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0036 a0002c0002t0003g0036	1	180	0.0056	24	c.41 others(35): Show c.4110_*4111insGAGCGGGGCCGGGGTCAGTGGAGC	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		3930		chr11	TogoVar
SIGIRR_chr11_400716_419999	402045	C C	CCGCTCAC others(17): Show CCGCTCACCCGGGACCCCGCTCACA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	207	0.0048	24	c.38 others(35): Show c.3850_*3851insTGTGAGCGGGGTCCCGGGTGAGCG	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		3670		chr11	TogoVar
SIGIRR_chr11_400716_419999	402659	G G	GCCCCCGC others(17): Show GCCCCCGCTCACCCCTGCCCCGCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	169	0.0059	24	c.32 others(35): Show c.3236_*3237insGAGCGGGGCAGGGGTGAGCGGGGG	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		3056		chr11	TogoVar
SIGIRR_chr11_400716_419999	402661	C C	CCCGCTCA others(17): Show CCCGCTCACCCCCTGCCTCCGCTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	239	0.0042	24	c.32 others(35): Show c.3234_*3235insTGAGCGGAGGCAGGGGGTGAGCGG	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		3054		chr11	TogoVar
SIGIRR_chr11_400716_419999	402665	C C	CTCACCCC others(17): Show CTCACCCCTGCCCCGCTCACCCCGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	163	0.0061	24	c.32 others(35): Show c.3230_*3231insCCGGGGTGAGCGGGGCAGGGGTGA	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		3050		chr11	TogoVar
SIGIRR_chr11_400716_419999	404262	C C	CAGCATCC others(17): Show CAGCATCCAGCCTCCTGGCCAACCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	240	0.0042	24	c.16 others(35): Show c.1610_*1633dupAGGTTGGCCAGGAGGCTGGATGCT	SIGIRR	ENSG00000185187.13	transcript	ENST00000431843.7	protein_coding		1453		chr11	TogoVar
SIGLEC10_chr19_51405020_51422642	51405400	C C	CTTTTCTT others(17): Show CTTTTCTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0004 a0003c0005t0004	a0003c0005t0004g0111 a0003c0005t0004g0111	1	171	0.0058	24	c.56 others(35): Show c.5698_*5699insAAAAAAAAAAAAAAAAAAAGAAAA	SIGLEC10	ENSG00000142512.15	transcript	ENST00000339313.10	protein_coding		4619		chr19	TogoVar
SIGLEC8_chr19_51445997_51463454	51447589	C C	CTGCTGAT others(17): Show CTGCTGATTGGTCCATTTTACAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	450	0.0022	24	c.47 others(35): Show c.4789_*4790insCTCTGTAAAATGGACCAATCAGCA	SIGLEC8	ENSG00000105366.15	transcript	ENST00000321424.7	protein_coding		3407		chr19	TogoVar
SIK2_chr11_111597449_111735855	111612915	G G	GATATATA others(17): Show GATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0152 a0001c0001t0004g0152	1	17	0.0588	24	c.136 others(41): Show c.136-3319_136-3296dupATATATATATATATATATATATAT	SIK2	ENSG00000170145.5	transcript	ENST00000304987.4	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr11	TogoVar
SIK2_chr11_111597449_111735855	111628416	A A	ATCTTTCT others(17): Show ATCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG01358.hp1 others(20): Show HG00621.hp1 HG00621.hp2 HG01358.hp1 HG01358.hp2 HG01884.hp2 HG01978.hp1 HG01978.hp2 HG02056.hp1 HG02129.hp1 HG02280.hp1 HG03654.hp2 HG06807.hp1 NA18939.hp2 NA18951.hp1 NA18965.hp1 NA18965.hp2 NA18974.hp1 NA18974.hp2 NA18983.hp1 NA18988.hp2 NA18989.hp2 NA18994.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0028 a0001c0001t0034 a0001c0001t0045	a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0054 others(20): Show a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0054 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0002g0024 a0001c0001t0002g0053 a0001c0001t0002g0056 a0001c0001t0002g0065 a0001c0001t0003g0057 a0001c0001t0006g0085 a0001c0001t0006g0087 a0001c0001t0006g0090 a0001c0001t0010g0077 a0001c0001t0010g0078 a0001c0001t0010g0082 a0001c0001t0028g0097 a0001c0001t0034g0063 a0001c0001t0045g0055	23	45	0.5111	24	c.316 others(41): Show c.316+8028_316+8051dupCTTTCTTTCTTTCTTTCTTTCTTT	SIK2	ENSG00000170145.5	transcript	ENST00000304987.4	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr11	TogoVar
SIK3_chr11_116838402_117103428	116842618	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02015.hp1 HG02717.hp1 others(10): Show HG01884.hp2 HG02015.hp1 HG02717.hp1 HG03041.hp1 HG03139.hp2 HG03225.hp2 HG03669.hp2 HG04184.hp2 NA18950.hp2 NA18953.hp1 NA19009.hp1 NA19030.hp1 NA20752.hp2	a0002 a0004 a0013 others(1): Show a0002 a0004 a0013 a0014	a0002c0003 a0004c0006 a0013c0019 others(1): Show a0002c0003 a0004c0006 a0013c0019 a0014c0027	a0002c0003t0001 a0002c0003t0006 a0002c0003t0007 others(3): Show a0002c0003t0001 a0002c0003t0006 a0002c0003t0007 a0004c0006t0001 a0013c0019t0006 a0014c0027t0001	a0002c0003t0001g0355 a0002c0003t0006g0311 a0002c0003t0006g0314 others(10): Show a0002c0003t0001g0355 a0002c0003t0006g0311 a0002c0003t0006g0314 a0002c0003t0006g0319 a0002c0003t0006g0326 a0002c0003t0006g0327 a0002c0003t0006g0334 a0002c0003t0006g0352 a0002c0003t0006g0354 a0002c0003t0007g0318 a0004c0006t0001g0348 a0013c0019t0006g0317 a0014c0027t0001g0340	13	143	0.0909	24	c.30 others(35): Show c.3024_*3025insAAAAAAAAAAAAAAAAAAAAAAAA	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding		783		chr11	TogoVar
SIK3_chr11_116838402_117103428	116844584	A A	ATATATAT others(17): Show ATATATATATATTTTATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0218 a0001c0001t0015g0218	1	363	0.0028	24	c.10 others(35): Show c.1035_*1058dupATATATATATAAAATATATATATA	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	25/25	1811		chr11	TogoVar
SIK3_chr11_116838402_117103428	116915124	A A	ATGTGTGT others(17): Show ATGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03195.hp2 NA18984.hp1 HG03195.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0163 a0001c0001t0003g0172 a0001c0001t0003g0163 a0001c0001t0003g0172	2	172	0.0116	24	c.616 others(43): Show c.616+12071_616+12094dupCACACACACACACACACACACACA	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	4/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117013903	G G	GGTGTGTG others(17): Show GGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0018 a0001c0002t0002g0018	1	241	0.0041	24	c.274 others(43): Show c.274-56840_274-56839insACACACACACACACACACACACAC	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117013910	G G	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01243.hp1 NA18957.hp2 others(5): Show HG01074.hp2 HG01243.hp1 NA18957.hp2 NA18968.hp2 NA19054.hp2 NA19056.hp2 NA19072.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0070 a0001c0001t0001g0150 a0001c0001t0001g0157 others(5): Show a0001c0001t0001g0070 a0001c0001t0001g0150 a0001c0001t0001g0157 a0001c0001t0003g0147 a0001c0001t0003g0151 a0001c0001t0003g0156 a0001c0001t0003g0161 a0001c0001t0003g0281	8	364	0.0220	24	c.274 others(43): Show c.274-56847_274-56846insTACACACACACACACACACACACA	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117016394	G G	GGGAAGGA others(17): Show GGGAAGGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01433.hp1 HG02486.hp1 others(5): Show HG01175.hp2 HG01433.hp1 HG02486.hp1 HG02630.hp2 HG02895.hp1 HG02897.hp2 HG03540.hp1 NA21309.hp1	a0001 a0005 a0008 a0001 a0005 a0008	a0001c0001 a0005c0007 a0008c0024 a0001c0001 a0005c0007 a0008c0024	a0001c0001t0001 a0005c0007t0008 a0008c0024t0001 a0001c0001t0001 a0005c0007t0008 a0008c0024t0001	a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 others(5): Show a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0005c0007t0008g0038 a0005c0007t0008g0061 a0005c0007t0008g0077 a0005c0007t0008g0083 a0008c0024t0001g0091	8	67	0.1194	24	c.274 others(43): Show c.274-59354_274-59331dupTTCCTTCCTTCCTTCCTTCCTTCC	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117016394	G G	GGGAGGGA others(17): Show GGGAGGGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 NA18906.hp1 HG02896.hp2 NA18906.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0004 a0003c0005t0004 a0001c0002t0004 a0003c0005t0004	a0001c0002t0004g0350 a0003c0005t0004g0351 a0001c0002t0004g0350 a0003c0005t0004g0351	2	61	0.0328	24	c.274 others(43): Show c.274-59331_274-59330insTTCCTTCCTTCCTTCCTTCCCTCC	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117016394	G G	GGGAGGGA others(17): Show GGGAGGGAGGGAGGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19043.hp2 HG03579.hp2 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0045 a0001c0002t0004g0055 a0001c0002t0004g0045 a0001c0002t0004g0055	2	61	0.0328	24	c.274 others(43): Show c.274-59331_274-59330insTTCCTTCCTTCCCTCCCTCCCTCC	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117016394	G G	GGGAGGGA others(17): Show GGGAGGGAGGGAGGGAGGGAGGGAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01243.hp1 NA18975.hp2 others(2): Show HG01074.hp2 HG01243.hp1 NA18975.hp2 NA18983.hp1 NA19064.hp1	a0001 a0018 a0001 a0018	a0001c0001 a0018c0022 a0001c0001 a0018c0022	a0001c0001t0001 a0001c0001t0003 a0018c0022t0003 a0001c0001t0001 a0001c0001t0003 a0018c0022t0003	a0001c0001t0001g0155 a0001c0001t0003g0147 a0001c0001t0003g0149 others(2): Show a0001c0001t0001g0155 a0001c0001t0003g0147 a0001c0001t0003g0149 a0001c0001t0003g0161 a0018c0022t0003g0148	5	64	0.0781	24	c.274 others(43): Show c.274-59331_274-59330insTTCCCTCCCTCCCTCCCTCCCTCC	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar
SIK3_chr11_116838402_117103428	117020246	T T	TATATATA others(17): Show TATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0004 a0003c0005t0004	a0003c0005t0004g0041 a0003c0005t0004g0041	1	229	0.0044	24	c.274 others(43): Show c.274-63183_274-63182insGTGTATATATATATATATATATAT	SIK3	ENSG00000160584.17	transcript	ENST00000445177.6	protein_coding	1/24			chr11	TogoVar

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