Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SNTG1_chr8_49906407_50801692	50660241	G G	GGAAGGAA others(17): Show GGAAGGAAGGAAAGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02055.hp1 HG02723.hp2 others(6): Show HG01071.hp2 HG02055.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG03139.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 others(4): Show a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0013 a0001c0001t0030 a0001c0001t0032 a0001c0001t0048	a0001c0001t0007g0006 a0001c0001t0009g0100 a0001c0001t0009g0101 others(6): Show a0001c0001t0007g0006 a0001c0001t0009g0100 a0001c0001t0009g0101 a0001c0001t0010g0030 a0001c0001t0013g0009 a0001c0001t0013g0067 a0001c0001t0030g0053 a0001c0001t0032g0052 a0001c0001t0048g0105	9	106	0.0849	24	c.103 others(43): Show c.1038+1585_1038+1586insGGAAAGAAGGAAGGAAAGAAGGAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50701579	T T	TTTCTTCT others(17): Show TTTCTTCTTCTTCTTCTTCTTCTTC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02976.hp2 HG01884.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0035 a0001c0001t0023 a0001c0001t0035	a0001c0001t0023g0002 a0001c0001t0035g0031 a0001c0001t0023g0002 a0001c0001t0035g0031	2	73	0.0274	24	c.103 others(43): Show c.1039-3015_1039-3014insTTCTTCTTCTTCTTCTTCTTCTTC	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50734808	G G	GATATCTA others(17): Show GATATCTATATATATGGACATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA18952.hp2 NA18992.hp1 others(1): Show HG00621.hp1 NA18952.hp2 NA18992.hp1 NA19068.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0098 others(1): Show a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0098 a0001c0002t0003g0008	4	101	0.0396	24	c.128 others(45): Show c.1285-17105_1285-17082dupGACATATATATATCTATATATATG	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	17/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	948493	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG02976.hp1 HG02559.hp1 HG02976.hp1	a0004 a0009 a0004 a0009	a0004c0004 a0009c0012 a0004c0004 a0009c0012	a0004c0004t0001 a0009c0012t0001 a0004c0004t0001 a0009c0012t0001	a0004c0004t0001g0047 a0009c0012t0001g0066 a0004c0004t0001g0047 a0009c0012t0001g0066	2	51	0.0392	24	c.-25 others(35): Show c.-2504_-2503insATATATATATATATATATATATAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding		2355		chr2	TogoVar
SNTG2_chr2_945849_1372613	996673	G G	GTTTTTTT others(17): Show GTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02735.hp2 HG00438.hp2 HG02735.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0002c0003t0001 a0001c0002t0001 a0002c0003t0001	a0001c0002t0001g0170 a0002c0003t0001g0099 a0001c0002t0001g0170 a0002c0003t0001g0099	2	3	0.6667	24	c.72+ others(41): Show c.72+45613_72+45636dupTTTTTTTTTTTTTTTTTTTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1031508	T T	TTTTATAT others(17): Show TTTTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0002 a0003c0007t0002	a0003c0007t0002g0077 a0003c0007t0002g0077	1	170	0.0059	24	c.73- others(41): Show c.73-52009_73-52008insTTATATATATATATATATATATAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1031528	A A	ATATATAT others(17): Show ATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG03017.hp1 NA20300.hp2 HG03017.hp1 NA20300.hp2	a0002 a0007 a0002 a0007	a0002c0003 a0007c0024 a0002c0003 a0007c0024	a0002c0003t0001 a0007c0024t0002 a0002c0003t0001 a0007c0024t0002	a0002c0003t0001g0094 a0007c0024t0002g0073 a0002c0003t0001g0094 a0007c0024t0002g0073	2	82	0.0244	24	c.73- others(41): Show c.73-51989_73-51988insATATATATATATATATATTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1031528	A A	ATATATAT others(17): Show ATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02273.hp1 HG01496.hp1 HG02273.hp1	a0002 a0006 a0002 a0006	a0002c0003 a0006c0009 a0002c0003 a0006c0009	a0002c0003t0001 a0006c0009t0001 a0002c0003t0001 a0006c0009t0001	a0002c0003t0001g0029 a0006c0009t0001g0028 a0002c0003t0001g0029 a0006c0009t0001g0028	2	82	0.0244	24	c.73- others(41): Show c.73-51989_73-51988insATATATATATATATATTTTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1031528	A A	ATATATAT others(17): Show ATATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02132.hp1 HG02071.hp2 HG02132.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0014 a0001c0002t0001g0016 a0001c0002t0001g0014 a0001c0002t0001g0016	2	82	0.0244	24	c.73- others(41): Show c.73-51989_73-51988insATATATATATTTTTTTTTTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1222109	C C	CTCTCTGT others(17): Show CTCTCTGTCTCTGTCTCTCTCTCTG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0001 a0003c0008t0001	a0003c0008t0001g0096 a0003c0008t0001g0096	1	137	0.0073	24	c.719 others(43): Show c.719+12890_719+12891insGTCTCTCTCTCTGTCTCTGTCTCT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1255863	A A	AATATATA others(17): Show AATATATATATAAATATATATAAAT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03540.hp1 HG02451.hp2 HG03540.hp1	a0003 a0015 a0003 a0015	a0003c0026 a0015c0025 a0003c0026 a0015c0025	a0003c0026t0001 a0015c0025t0001 a0003c0026t0001 a0015c0025t0001	a0003c0026t0001g0097 a0015c0025t0001g0034 a0003c0026t0001g0097 a0015c0025t0001g0034	2	186	0.0108	24	c.100 others(43): Show c.1006-3498_1006-3497insTAAATATATATAAATATATATATA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	12/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNX10_chr7_26286862_26379383	26325306	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01192.hp1 HG03017.hp1 others(6): Show HG00642.hp2 HG01192.hp1 HG03017.hp1 HG03491.hp1 HG03492.hp2 NA19002.hp2 NA19080.hp1 NA19240.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0136 a0001c0001t0001g0141 others(5): Show a0001c0001t0001g0005 a0001c0001t0001g0136 a0001c0001t0001g0141 a0001c0001t0001g0148 a0001c0001t0001g0157 a0001c0001t0001g0258 a0001c0001t0001g0324 a0001c0001t0001g0325	9	15	0.6000	24	c.-23 others(43): Show c.-23-21092_-23-21091insATATATATATATATATATATATAT	SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX11_chr17_48102766_48128601	48105324	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	50	0.0200	24	c.-25 others(35): Show c.-2528_-2527insTTTTTTTTTTTTTTTTTTTTTTTT	SNX11	ENSG00000002919.15	transcript	ENST00000359238.7	protein_coding		2441		chr17	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGCGTG others(17): Show TGTGCGTGCGTGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0027 a0001c0002t0027	a0001c0002t0027g0300 a0001c0002t0027g0300	1	252	0.0040	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCGCGCACGCACGCAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGCGTGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0204 a0001c0002t0002g0204	1	252	0.0040	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCGCGCACGCACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGTGCGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0209 a0001c0002t0002g0209	1	252	0.0040	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCGCACGCACACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGTGTGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA18974.hp2 HG03225.hp1 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0146 a0001c0001t0004g0186 a0001c0001t0001g0146 a0001c0001t0004g0186	2	253	0.0079	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCGCGCACACACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGTGTGCGTGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0290 a0001c0002t0002g0290	1	252	0.0040	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCACGCACACACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGTGTGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0213 a0001c0002t0002g0213	1	252	0.0040	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCGCGCACACACACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX13_chr7_17785761_17945494	17805250	T T	TGTGTGTG others(17): Show TGTGTGTGTGTGTGTGTGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01243.hp1 NA18979.hp2 HG01243.hp1 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0002 a0001c0001t0004 a0001c0002t0002	a0001c0001t0004g0114 a0001c0002t0002g0059 a0001c0001t0004g0114 a0001c0002t0002g0059	2	253	0.0079	24	c.206 others(43): Show c.2065-1671_2065-1670insGCGCGCGCACACACACACACACAC	SNX13	ENSG00000071189.21	transcript	ENST00000428135.7	protein_coding	20/25			chr7	TogoVar
SNX14_chr6_85500496_85598858	85588575	C C	CTAAATAA others(17): Show CTAAATAAATAAATAAATAAATAAA	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0195	1	186	0.0054	24	c.140 others(41): Show c.140+4980_140+5003dupTTTATTTATTTATTTATTTATTTA	SNX14	ENSG00000135317.14	transcript	ENST00000314673.8	protein_coding	1/28			chr6	TogoVar
SNX15_chr11_65022439_65045572	65039029	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00642.hp1 HG01361.hp1 others(14): Show HG00423.hp1 HG00642.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp2 HG02109.hp1 HG02135.hp2 HG02257.hp1 HG02683.hp2 HG02895.hp2 HG03209.hp1 NA18981.hp1 NA18982.hp1 NA18999.hp2 NA19002.hp1 NA19060.hp2 NA19066.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0012 a0001c0002t0002 a0001c0002t0012	a0001c0002t0002g0003 a0001c0002t0002g0046 a0001c0002t0002g0119 others(2): Show a0001c0002t0002g0003 a0001c0002t0002g0046 a0001c0002t0002g0119 a0001c0002t0002g0126 a0001c0002t0012g0003	17	173	0.0983	24	c.922 others(39): Show c.922+219_922+220insTTTTTTTTTTTTTTTTTTTTTTTT	SNX15	ENSG00000110025.13	transcript	ENST00000377244.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX18_chr5_54512759_54551586	54513668	T T	TATATATA others(17): Show TATATATAATATATATTATATATAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	384	0.0026	24	c.-42 others(35): Show c.-4285_-4284insATATATAATATATATTATATATAA	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		4090		chr5	TogoVar
SNX1_chr15_64090982_64149231	64124147	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0160 a0001c0001t0014g0160	1	7	0.1429	24	c.510 others(39): Show c.510+610_510+633dupATATATATATATATATATATATAT	SNX1	ENSG00000028528.15	transcript	ENST00000559844.6	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
SNX1_chr15_64090982_64149231	64140983	T T	TGATAGAT others(17): Show TGATAGATAGATAGATAGATAGATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04184.hp1 HG04204.hp1 NA18953.hp2 others(1): Show HG04184.hp1 HG04204.hp1 NA18953.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0002 a0001c0001t0018 a0001c0008t0002 a0001c0001t0002 a0001c0001t0018 a0001c0008t0002	a0001c0001t0002g0097 a0001c0001t0018g0006 a0001c0008t0002g0153 a0001c0001t0002g0097 a0001c0001t0018g0006 a0001c0008t0002g0153	4	29	0.1379	24	c.33 others(35): Show c.3385_*3408dupAGATAGATAGATAGATAGATAGAT	SNX1	ENSG00000028528.15	transcript	ENST00000559844.6	protein_coding	15/15	3409	INFO_REALIGN_3_PRIME	chr15	TogoVar
SNX25_chr4_185204598_185368966	185300839	T T	TCACACAC others(17): Show TCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	273	0.0037	24	c.116 others(43): Show c.1163-9796_1163-9795insCACACACACACACACACACACACA	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	6/18			chr4	TogoVar
SNX25_chr4_185204598_185368966	185300840	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	49	0.0204	24	c.116 others(43): Show c.1163-9783_1163-9760dupCACACACACACACACACACACACA	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	6/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX25_chr4_185204598_185368966	185360930	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0001 a0003c0007t0001	a0003c0007t0001g0184 a0003c0007t0001g0184	1	152	0.0066	24	c.265 others(41): Show c.2652-971_2652-970insTATATATATATATATATATATATA	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	16/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX25_chr4_185204598_185368966	185360950	T T	TATATATA others(17): Show TATATATATATATATATATAGATAG	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0107 a0001c0003t0001g0107	1	250	0.0040	24	c.265 others(41): Show c.2652-971_2652-970insTATATATATATATATAGATAGATA	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	16/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151641598	G G	GATATATA others(17): Show GATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03688.hp1 NA19012.hp1 HG03195.hp2 HG03688.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0036 a0001c0001t0100 a0001c0001t0020 a0001c0001t0036 a0001c0001t0100	a0001c0001t0020g0075 a0001c0001t0036g0305 a0001c0001t0100g0096 a0001c0001t0020g0075 a0001c0001t0036g0305 a0001c0001t0100g0096	3	14	0.2143	24	c.543 others(41): Show c.543+2488_543+2511dupATATATATATATATATATATATAT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151652205	G G	GGGGAGAG others(17): Show GGGGAGAGGGAGAGGGAGAGGGAGA	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0247 a0001c0001t0008g0247	1	134	0.0075	24	c.544 others(41): Show c.544-6011_544-5988dupGGGAGAGGGAGAGGGAGAGGGAGA	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151681235	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02523.hp2 NA18949.hp1 others(4): Show HG00738.hp2 HG02523.hp2 NA18949.hp1 NA18951.hp1 NA18955.hp1 NA18984.hp2 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0061	a0001c0001t0001g0190 a0001c0001t0001g0210 a0001c0001t0001g0223 others(4): Show a0001c0001t0001g0190 a0001c0001t0001g0210 a0001c0001t0001g0223 a0001c0001t0001g0229 a0001c0001t0004g0216 a0001c0001t0008g0248 a0001c0001t0061g0187	7	125	0.0560	24	c.115 others(43): Show c.1150-2120_1150-2097dupTTTTTTTTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151696498	T T	TTTCTTTC others(17): Show TTTCTTTCGTTCTTTCGTTCTTTCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00673.hp1 HG02273.hp1 HG03834.hp1 others(3): Show HG00673.hp1 HG02273.hp1 HG03834.hp1 NA18961.hp1 NA18966.hp2 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0001 a0001c0001t0004 a0001c0001t0008	a0001c0001t0001g0205 a0001c0001t0001g0267 a0001c0001t0001g0273 others(3): Show a0001c0001t0001g0205 a0001c0001t0001g0267 a0001c0001t0001g0273 a0001c0001t0004g0204 a0001c0001t0008g0248 a0001c0001t0008g0250	6	248	0.0242	24	c.20 others(35): Show c.2089_*2112dupGTTCTTTCGTTCTTTCGTTCTTTC	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	12/12	2113	INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151696498	T T	TTTCTTTC others(17): Show TTTCTTTCTTTCTTTCGTTCTTTCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp2 HG01516.hp1 HG01978.hp2 others(4): Show HG00280.hp2 HG01516.hp1 HG01978.hp2 HG02056.hp2 HG02145.hp2 HG02886.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0091 a0001c0001t0001 a0001c0001t0004 a0001c0001t0091	a0001c0001t0001g0195 a0001c0001t0001g0212 a0001c0001t0001g0217 others(4): Show a0001c0001t0001g0195 a0001c0001t0001g0212 a0001c0001t0001g0217 a0001c0001t0001g0269 a0001c0001t0001g0271 a0001c0001t0004g0254 a0001c0001t0091g0331	7	249	0.0281	24	c.20 others(35): Show c.2088_*2089insTTTCTTTCGTTCTTTCGTTCTTTC	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	12/12	2089	INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	12013498	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0161 a0001c0004t0003g0161	1	161	0.0062	24	c.122 others(43): Show c.122+10456_122+10457insTATATATATATATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12013500	A A	AAAAAAAA others(17): Show AAAAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0020	1	54	0.0185	24	c.122 others(43): Show c.122+10458_122+10459insAAAAAAAAAAAATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12063366	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02622.hp2 HG02015.hp2 HG02622.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0002 a0001c0004t0005 a0001c0003t0002 a0001c0004t0005	a0001c0003t0002g0119 a0001c0004t0005g0171 a0001c0003t0002g0119 a0001c0004t0005g0171	2	19	0.1053	24	c.124 others(43): Show c.1243+1723_1243+1746dupTTTTTTTTTTTTTTTTTTTTTTTT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	9/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12464229	C C	CGTGTGTG others(17): Show CGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0087 a0001c0002t0087	a0001c0002t0087g0073 a0001c0002t0087g0073	1	121	0.0083	24	c.203 others(45): Show c.2038-13474_2038-13473insGTGTGTGTGTGTGTGTGTGTGTGT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476397	T T	TATACATA others(17): Show TATACATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0053	a0001c0001t0053g0121 a0001c0001t0053g0121	1	167	0.0060	24	c.203 others(43): Show c.2038-1319_2038-1318insCATATATATATATATATATACATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12483114	G G	GTTTTTTT others(17): Show GTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0086 a0001c0002t0086	a0001c0002t0086g0018 a0001c0002t0086g0018	1	54	0.0185	24	c.217 others(43): Show c.2178+5261_2178+5284dupTTTTTTTTTTTTTTTTTTTTTTTT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX2_chr5_122770080_122839543	122806142	G G	GCGCGCAC others(17): Show GCGCGCACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0152 a0001c0001t0046g0152	1	15	0.0667	24	c.644 others(41): Show c.644-2134_644-2133insGCGCACACACACACACACACACAC	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX2_chr5_122770080_122839543	122806142	G G	GCGCGCAC others(17): Show GCGCGCACGCACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0020 a0001c0007t0020	a0001c0007t0020g0231 a0001c0007t0020g0231	1	15	0.0667	24	c.644 others(41): Show c.644-2134_644-2133insGCGCACGCACACACACACACACAC	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX2_chr5_122770080_122839543	122806142	G G	GCGCGCAC others(17): Show GCGCGCACGCGCACACACACACACA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00738.hp2 HG02280.hp2 others(4): Show HG00558.hp1 HG00738.hp2 HG02280.hp2 HG02622.hp2 HG02630.hp1 HG03017.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0021 a0001c0001t0028 a0001c0001t0004 a0001c0001t0021 a0001c0001t0028	a0001c0001t0004g0156 a0001c0001t0004g0159 a0001c0001t0004g0173 others(4): Show a0001c0001t0004g0156 a0001c0001t0004g0159 a0001c0001t0004g0173 a0001c0001t0004g0192 a0001c0001t0021g0201 a0001c0001t0021g0202 a0001c0001t0028g0145	7	21	0.3333	24	c.644 others(41): Show c.644-2134_644-2133insGCGCACGCGCACACACACACACAC	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX2_chr5_122770080_122839543	122806142	G G	GCGCGCGC others(17): Show GCGCGCGCGCACGCGCACACACACA	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0148 a0001c0001t0011g0148	1	15	0.0667	24	c.644 others(41): Show c.644-2134_644-2133insGCGCGCGCACGCGCACACACACAC	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX30_chr9_112745760_112879987	112817401	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03579.hp2 NA18954.hp2 HG02300.hp1 HG03579.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0218 a0001c0001t0003g0302 a0001c0002t0001g0030 a0001c0001t0001g0218 a0001c0001t0003g0302 a0001c0002t0001g0030	3	10	0.3000	24	c.349 others(39): Show c.349-297_349-274dupTTTTTTTTTTTTTTTTTTTTTTTT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112865661	A A	ATATATAT others(17): Show ATATATATATATATATATATGTGTG	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0027 a0001c0002t0027	a0001c0002t0027g0333 a0001c0002t0027g0333	1	76	0.0132	24	c.125 others(43): Show c.1254+1263_1254+1264insATATATATATATATATATGTGTGT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112865661	A A	ATATATAT others(17): Show ATATATATATATATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0324 a0001c0002t0007g0324	1	76	0.0132	24	c.125 others(43): Show c.1254+1263_1254+1264insATATATATATATATATGTGTGTGT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX31_chr8_100567889_100654665	100581319	C C	CTATATAT others(17): Show CTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02896.hp1 HG02897.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0182 a0003c0003t0001g0186 a0003c0003t0001g0182 a0003c0003t0001g0186	2	284	0.0070	24	c.117 others(43): Show c.1170+2791_1170+2792insTATATATATATATATATATATATA	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	12/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100581327	A A	ATATATAT others(17): Show ATATATATATATATATATATATATC	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0177 a0003c0003t0003g0177	1	264	0.0038	24	c.117 others(43): Show c.1170+2783_1170+2784insGATATATATATATATATATATATA	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	12/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100635222	T T	TTTTATTT others(17): Show TTTTATTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01099.hp1 HG01175.hp1 others(14): Show HG00621.hp1 HG01099.hp1 HG01175.hp1 HG01261.hp1 HG02015.hp2 HG02109.hp1 HG02257.hp1 HG02258.hp1 HG02698.hp2 HG02738.hp1 HG02970.hp1 HG03225.hp1 HG03654.hp1 HG03669.hp2 HG03831.hp2 NA18747.hp1 NA18957.hp2	a0003 a0005 a0007 others(1): Show a0003 a0005 a0007 a0011	a0003c0003 a0005c0005 a0007c0007 others(1): Show a0003c0003 a0005c0005 a0007c0007 a0011c0010	a0003c0003t0004 a0003c0003t0005 a0003c0003t0006 others(7): Show a0003c0003t0004 a0003c0003t0005 a0003c0003t0006 a0005c0005t0001 a0005c0005t0002 a0005c0005t0004 a0007c0007t0005 a0007c0007t0006 a0007c0007t0009 a0011c0010t0011	a0003c0003t0004g0145 a0003c0003t0005g0047 a0003c0003t0005g0048 others(13): Show a0003c0003t0004g0145 a0003c0003t0005g0047 a0003c0003t0005g0048 a0003c0003t0006g0122 a0005c0005t0001g0211 a0005c0005t0002g0041 a0005c0005t0002g0044 a0005c0005t0004g0005 a0005c0005t0004g0111 a0005c0005t0004g0128 a0005c0005t0004g0129 a0007c0007t0005g0043 a0007c0007t0006g0144 a0007c0007t0009g0157 a0011c0010t0011g0142 a0011c0010t0011g0143	17	256	0.0664	24	c.256 others(39): Show c.256+674_256+675insTAAATAAATAAATAAATAAATAAA	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	3/13			chr8	TogoVar

Search by Variant

Search

Search Results