Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SYT1_chr12_78859774_79457008	79026702	T T	TATATATA others(17): Show TATATATATATATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA18952.hp1 HG01261.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0004 a0001c0001t0001 a0001c0002t0004	a0001c0001t0001g0047 a0001c0002t0004g0028 a0001c0001t0001g0047 a0001c0002t0004g0028	2	52	0.0385	24	c.-83 others(43): Show c.-83-20595_-83-20594insATATATATATATATATATATAAAA	SYT1	ENSG00000067715.15	transcript	ENST00000261205.9	protein_coding	2/10			chr12	TogoVar
SYT1_chr12_78859774_79457008	79193663	G G	GGCTGCAG others(17): Show GGCTGCAGTGAGCTATGATCATGCC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02897.hp1 HG02647.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0019 a0001c0001t0003 a0001c0001t0019	a0001c0001t0003g0035 a0001c0001t0019g0013 a0001c0001t0003g0035 a0001c0001t0019g0013	2	60	0.0333	24	c.-17 others(43): Show c.-17-23839_-17-23816dupGCTGCAGTGAGCTATGATCATGCC	SYT1	ENSG00000067715.15	transcript	ENST00000261205.9	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
SYT2_chr1_202585596_202715454	202704663	T T	TACACACA others(17): Show TACACACATATGCACACACAGGTAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(86): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG01071.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01175.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01358.hp2 HG01515.hp2 HG01516.hp2 HG01891.hp2 HG01975.hp2 HG01978.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02074.hp2 HG02080.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp2 HG02280.hp1 HG02300.hp1 HG02451.hp1 HG02559.hp2 HG02698.hp2 HG02717.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03239.hp1 HG03490.hp2 HG03491.hp1 HG03710.hp1 HG03942.hp2 HG04115.hp2 HG04204.hp2 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18945.hp1 NA18948.hp1 NA18962.hp1 NA18964.hp1 NA18970.hp1 NA18971.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp2 NA18993.hp1 NA18995.hp1 NA19005.hp2 NA19007.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19063.hp1 NA19064.hp2 NA19067.hp1 NA19079.hp1 NA19082.hp1 NA19084.hp1 NA19088.hp2 NA20752.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0002c0008	a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 others(33): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0009 a0001c0001t0016 a0001c0001t0025 a0001c0001t0038 a0001c0001t0039 a0001c0001t0041 a0001c0001t0045 a0001c0001t0046 a0001c0001t0048 a0001c0001t0049 a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0001c0002t0010 a0001c0002t0012 a0001c0002t0013 a0001c0002t0030 a0001c0002t0056 a0001c0002t0057 a0001c0002t0062 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0018 a0001c0003t0050 a0001c0003t0052 a0001c0003t0053 a0001c0003t0063 a0001c0003t0066 a0001c0004t0014 a0001c0004t0015 a0001c0004t0033 a0001c0005t0019 a0002c0008t0020	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(86): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0200 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0267 a0001c0001t0007g0207 a0001c0001t0007g0232 a0001c0001t0007g0234 a0001c0001t0009g0225 a0001c0001t0009g0227 a0001c0001t0016g0038 a0001c0001t0016g0243 a0001c0001t0025g0213 a0001c0001t0025g0231 a0001c0001t0038g0264 a0001c0001t0039g0040 a0001c0001t0041g0265 a0001c0001t0045g0224 a0001c0001t0046g0209 a0001c0001t0048g0262 a0001c0001t0049g0263 a0001c0002t0002g0030 a0001c0002t0002g0229 a0001c0002t0004g0191 a0001c0002t0004g0196 a0001c0002t0004g0214 a0001c0002t0004g0215 a0001c0002t0004g0221 a0001c0002t0004g0222 a0001c0002t0004g0226 a0001c0002t0004g0228 a0001c0002t0004g0233 a0001c0002t0004g0235 a0001c0002t0004g0253 a0001c0002t0004g0260 a0001c0002t0008g0151 a0001c0002t0008g0256 a0001c0002t0010g0192 a0001c0002t0010g0194 a0001c0002t0010g0195 a0001c0002t0012g0271 a0001c0002t0013g0204 a0001c0002t0030g0039 a0001c0002t0056g0250 a0001c0002t0057g0268 a0001c0002t0062g0205 a0001c0003t0003g0043 a0001c0003t0003g0193 a0001c0003t0003g0197 a0001c0003t0003g0198 a0001c0003t0003g0199 a0001c0003t0003g0202 a0001c0003t0003g0216 a0001c0003t0003g0255 a0001c0003t0005g0203 a0001c0003t0005g0217 a0001c0003t0005g0230 a0001c0003t0005g0261 a0001c0003t0011g0201 a0001c0003t0018g0211 a0001c0003t0018g0236 a0001c0003t0050g0266 a0001c0003t0052g0223 a0001c0003t0053g0218 a0001c0003t0063g0031 a0001c0003t0066g0219 a0001c0004t0014g0269 a0001c0004t0014g0270 a0001c0004t0015g0272 a0001c0004t0033g0035 a0001c0005t0019g0220 a0002c0008t0020g0254	89	274	0.3248	24	c.-18 others(41): Show c.-18+5594_-18+5595insGTACCTGTGTGTGCATATGTGTGT	SYT2	ENSG00000143858.12	transcript	ENST00000367268.5	protein_coding	1/8			chr1	TogoVar
SYT5_chr19_55166196_55185289	55168376	C C	CATATATA others(17): Show CATATATATATACATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0012 a0002c0003t0007g0012	1	379	0.0026	24	c.51 others(35): Show c.5107_*5108insATATATATATATGTATATATATAT	SYT5	ENSG00000129990.15	transcript	ENST00000354308.8	protein_coding		2819		chr19	TogoVar
SYT5_chr19_55166196_55185289	55168406	T T	TATATATA others(17): Show TATATATAGAGAGAGAGAGAGAGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0044 a0001c0001t0012g0044	1	155	0.0065	24	c.50 others(35): Show c.5077_*5078insCTCTCTCTCTCTCTCTCTATATAT	SYT5	ENSG00000129990.15	transcript	ENST00000354308.8	protein_coding		2789		chr19	TogoVar
SYT5_chr19_55166196_55185289	55169933	G G	GTATTTAT others(17): Show GTATTTATTTATTTATTTATTTATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG02004.hp2 HG02071.hp1 others(5): Show HG00558.hp1 HG02004.hp2 HG02071.hp1 HG02080.hp1 NA18939.hp2 NA18945.hp2 NA18991.hp2 NA19065.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0014 a0001c0002t0002 a0001c0002t0014	a0001c0002t0002g0002 a0001c0002t0002g0006 a0001c0002t0014g0016 a0001c0002t0002g0002 a0001c0002t0002g0006 a0001c0002t0014g0016	8	229	0.0349	24	c.35 others(35): Show c.3550_*3551insAATAAATAAATAAATAAATAAATA	SYT5	ENSG00000129990.15	transcript	ENST00000354308.8	protein_coding		1262		chr19	TogoVar
SYT5_chr19_55166196_55185289	55170850	T T	TTCTCTCT others(17): Show TTCTCTCTCTCTCTCTCTCTCTCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG00558.hp1 HG00738.hp1 others(19): Show HG00544.hp2 HG00558.hp1 HG00738.hp1 HG00738.hp2 HG01256.hp2 HG01258.hp2 HG01433.hp1 HG01928.hp1 HG01981.hp1 HG02109.hp2 HG02148.hp1 HG02148.hp2 HG02273.hp2 NA18939.hp2 NA18948.hp2 NA18956.hp1 NA18967.hp1 NA18969.hp2 NA18971.hp1 NA18983.hp1 NA19065.hp2 NA19091.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0014 a0001c0002t0002 a0001c0002t0014	a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0006 others(1): Show a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0006 a0001c0002t0014g0016	22	309	0.0712	24	c.26 others(35): Show c.2633_*2634insGAGAGAGAGAGAGAGAGAGAGAGA	SYT5	ENSG00000129990.15	transcript	ENST00000354308.8	protein_coding		345		chr19	TogoVar
SYT6_chr1_114084292_114158869	114122506	T T	TGTGTGTG others(17): Show TGTGTGTGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0050 a0001c0001t0019g0050	1	102	0.0098	24	c.107 others(45): Show c.1071+14988_1071+14989insGCGCGCACACACACACACACACAC	SYT6	ENSG00000134207.17	transcript	ENST00000610222.3	protein_coding	3/7			chr1	TogoVar
SYT6_chr1_114084292_114158869	114149223	G G	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTGTGCGCGCA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01975.hp1 HG01978.hp1 others(18): Show HG01243.hp2 HG01975.hp1 HG01978.hp1 HG01993.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02083.hp1 HG02148.hp2 HG02523.hp2 HG02602.hp2 NA18747.hp1 NA18956.hp2 NA18961.hp1 NA18968.hp2 NA18978.hp2 NA18999.hp2 NA19005.hp2 NA19010.hp1 NA19070.hp1 NA19072.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 a0002c0003t0001 a0002c0003t0005	a0001c0001t0001g0006 a0001c0001t0001g0061 a0001c0001t0001g0064 others(17): Show a0001c0001t0001g0006 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0076 a0001c0001t0005g0062 a0001c0001t0006g0075 a0001c0002t0001g0058 a0001c0002t0002g0059 a0002c0003t0001g0063 a0002c0003t0005g0060	21	322	0.0652	24	c.163 others(41): Show c.163+4386_163+4387insTGCGCGCACACACACACACACACA	SYT6	ENSG00000134207.17	transcript	ENST00000610222.3	protein_coding	1/7			chr1	TogoVar
SYT9_chr11_7246904_7474043	7376345	T T	TTTCCTTC others(17): Show TTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02486.hp2 HG00733.hp1 HG02486.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0002 a0003c0005t0007 a0001c0001t0002 a0003c0005t0007	a0001c0001t0002g0162 a0003c0005t0007g0189 a0001c0001t0002g0162 a0003c0005t0007g0189	2	202	0.0099	24	c.104 others(45): Show c.1045-39695_1045-39672dupTCCTTCCTTCCTTCCTTCCTTCCT	SYT9	ENSG00000170743.17	transcript	ENST00000318881.11	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
SYT9_chr11_7246904_7474043	7407360	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0237 a0001c0001t0003g0237	1	131	0.0076	24	c.104 others(43): Show c.1045-8674_1045-8651dupTTTTTTTTTTTTTTTTTTTTTTTT	SYT9	ENSG00000170743.17	transcript	ENST00000318881.11	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
SYT9_chr11_7246904_7474043	7470665	G G	GTATAAGC others(17): Show GTATAAGCTAAAGAAAAGCAACCGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0044 a0001c0002t0003g0044	1	270	0.0037	24	c.38 others(35): Show c.3865_*3866insTATAAGCTAAAGAAAAGCAACCGA	SYT9	ENSG00000170743.17	transcript	ENST00000318881.11	protein_coding		1623		chr11	TogoVar
SYTL2_chr11_85689229_85816141	85716695	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18945.hp2 NA18945.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0192 a0002c0002t0001g0192	1	24	0.0417	24	c.553 others(41): Show c.5530+764_5530+787dupGTGTGTGTGTGTGTGTGTGTGTGT	SYTL2	ENSG00000137501.18	transcript	ENST00000359152.10	protein_coding	11/19			chr11	TogoVar
SYTL2_chr11_85689229_85816141	85789348	A A	ATATATAT others(17): Show ATATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0300 a0001c0001t0001g0300	1	351	0.0028	24	c.-39 others(45): Show c.-390+21605_-390+21606insCATATATATATATATATATATATA	SYTL2	ENSG00000137501.18	transcript	ENST00000359152.10	protein_coding	1/19			chr11	TogoVar
SYTL3_chr6_158645054_158769871	158668226	T T	TTTTATTT others(17): Show TTTTATTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02622.hp2 NA21309.hp2 HG02451.hp1 HG02622.hp2 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0007 a0001c0001 a0005c0007	a0001c0001t0001 a0005c0007t0001 a0001c0001t0001 a0005c0007t0001	a0001c0001t0001g0015 a0001c0001t0001g0020 a0005c0007t0001g0045 a0001c0001t0001g0015 a0001c0001t0001g0020 a0005c0007t0001g0045	3	290	0.0103	24	c.329 others(41): Show c.329+2632_329+2633insATTTATTTATTTATTTATTTATTT	SYTL3	ENSG00000164674.17	transcript	ENST00000611299.5	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYTL3_chr6_158645054_158769871	158715599	T T	TCACACAC others(17): Show TCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02300.hp2 HG02683.hp1 others(4): Show HG00738.hp2 HG02300.hp2 HG02683.hp1 HG02717.hp2 HG02886.hp2 HG03540.hp1 HG03927.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0014 a0004c0003 a0001c0001 a0003c0014 a0004c0003	a0001c0001t0001 a0001c0001t0002 a0003c0014t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0003c0014t0001 a0004c0003t0001	a0001c0001t0001g0027 a0001c0001t0001g0148 a0001c0001t0001g0253 others(4): Show a0001c0001t0001g0027 a0001c0001t0001g0148 a0001c0001t0001g0253 a0001c0001t0001g0291 a0001c0001t0002g0006 a0003c0014t0001g0047 a0004c0003t0001g0199	7	132	0.0530	24	c.595 others(41): Show c.595+1738_595+1739insACACACACACACACACACACACAC	SYTL3	ENSG00000164674.17	transcript	ENST00000611299.5	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYTL3_chr6_158645054_158769871	158746453	A A	ATATTATT others(17): Show ATATTATTATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0196 a0001c0001t0001g0197	2	182	0.0110	24	c.103 others(41): Show c.1034+797_1034+798insTTATTATTATTATTATTATTATTA	SYTL3	ENSG00000164674.17	transcript	ENST00000611299.5	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
SYTL5_chrX_38001553_38133816	38043661	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03710.hp1 NA19085.hp1 HG03710.hp1 NA19085.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0001 a0006c0009t0001 a0001c0001t0001 a0006c0009t0001	a0001c0001t0001g0126 a0006c0009t0001g0096 a0001c0001t0001g0126 a0006c0009t0001g0096	2	118	0.0169	24	c.119 others(41): Show c.119+9660_119+9683dupTATATATATATATATATATATATA	SYTL5	ENSG00000147041.12	transcript	ENST00000297875.7	protein_coding	2/16		INFO_REALIGN_3_PRIME	chrX	TogoVar
SYTL5_chrX_38001553_38133816	38118920	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0232 a0001c0002t0002g0232	1	23	0.0435	24	c.159 others(43): Show c.1597-1418_1597-1417insATATATATATATATATATATATAT	SYTL5	ENSG00000147041.12	transcript	ENST00000297875.7	protein_coding	13/16		INFO_REALIGN_3_PRIME	chrX	TogoVar
TAAR1_chr6_132638312_132664182	132647623	G G	GAAAAGAA others(17): Show GAAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0001 a0001c0002t0002g0001	1	111	0.0090	24	c.-12 others(43): Show c.-126-1495_-126-1494insTTTCTTTCTTTCTTTCTTTCTTTT	TAAR1	ENSG00000146399.3	transcript	ENST00000275216.3	protein_coding	1/1			chr6	TogoVar
TAAR9_chr6_132533277_132544336	132543601	A A	AACACACA others(17): Show AACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	47	0.0213	24	c.42 others(35): Show c.4265_*4266insACACACACACACACACACACACAC	TAAR9	ENSG00000237110.3	transcript	ENST00000434551.3	protein_coding		4266		chr6	TogoVar
TAB2_chr6_149312712_149416607	149357430	A A	AAAAAAAA others(17): Show AAAAAAAACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02559.hp1 HG01192.hp2 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0328 a0001c0001t0003g0330 a0001c0001t0003g0328 a0001c0001t0003g0330	2	112	0.0179	24	c.-89 others(43): Show c.-89-12478_-89-12477insAAAAAACACACACACACACACACA	TAB2	ENSG00000055208.20	transcript	ENST00000637181.2	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
TAB2_chr6_149312712_149416607	149358640	C C	CTGTGTGT others(17): Show CTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00642.hp2 HG01243.hp1 others(25): Show HG00597.hp1 HG00642.hp2 HG01243.hp1 HG01433.hp2 HG01891.hp1 HG02055.hp2 HG02293.hp1 HG02602.hp1 HG02622.hp1 HG02922.hp2 HG03516.hp2 HG04184.hp2 NA18522.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp1 NA18977.hp1 NA18979.hp2 NA18993.hp1 NA18995.hp2 NA19030.hp1 NA19062.hp2 NA19072.hp2 NA19079.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0001c0002t0002	a0001c0001t0001g0009 a0001c0001t0001g0088 a0001c0001t0001g0090 others(25): Show a0001c0001t0001g0009 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0277 a0001c0001t0001g0288 a0001c0001t0001g0298 a0001c0001t0003g0320 a0001c0001t0003g0326 a0001c0001t0008g0167 a0001c0001t0011g0137 a0001c0002t0002g0197 a0001c0002t0002g0204 a0001c0002t0002g0241 a0001c0002t0002g0242 a0001c0002t0002g0243	28	100	0.2800	24	c.-89 others(43): Show c.-89-11259_-89-11236dupGTGTGTGTGTGTGTGTGTGTGTGT	TAB2	ENSG00000055208.20	transcript	ENST00000637181.2	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
TACC2_chr10_121984163_122259542	122126316	C C	CTGTGTGT others(17): Show CTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0066 a0066	a0066c0097 a0066c0097	a0066c0097t0003 a0066c0097t0003	a0066c0097t0003g0081 a0066c0097t0003g0081	1	32	0.0313	24	c.557 others(43): Show c.5574-6285_5574-6262dupGTGTGTGTGTGTGTGTGTGTGTGT	TACC2	ENSG00000138162.19	transcript	ENST00000369005.6	protein_coding	5/22		INFO_REALIGN_3_PRIME	chr10	TogoVar
TACC2_chr10_121984163_122259542	122132037	A A	AAAGAAAG others(17): Show AAAGAAAGAAAGAAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0022 a0022	a0022c0015 a0022c0015	a0022c0015t0002 a0022c0015t0002	a0022c0015t0002g0105 a0022c0015t0002g0105	1	301	0.0033	24	c.557 others(41): Show c.5574-557_5574-556insGAAGGAAGGAAGAAAGAAAGAAAG	TACC2	ENSG00000138162.19	transcript	ENST00000369005.6	protein_coding	5/22		INFO_REALIGN_3_PRIME	chr10	TogoVar
TACR1_chr2_75041463_75204520	75094859	A A	ATATATAT others(17): Show ATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	133	0.0075	24	c.584 others(43): Show c.584+25714_584+25715insAAAAAATATATATATATATATATA	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	2/4			chr2	TogoVar
TACR1_chr2_75041463_75204520	75094859	A A	ATATATAT others(17): Show ATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0173 a0001c0001t0003g0173	1	133	0.0075	24	c.584 others(43): Show c.584+25714_584+25715insAAAAAAAATATATATATATATATA	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	2/4			chr2	TogoVar
TACR1_chr2_75041463_75204520	75154401	A A	AGCGCGCG others(17): Show AGCGCGCGCGCGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG04199.hp1 HG01255.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0002 a0001c0001t0003 a0001c0002t0002	a0001c0001t0003g0172 a0001c0002t0002g0193 a0001c0001t0003g0172 a0001c0002t0002g0193	2	194	0.0103	24	c.390 others(43): Show c.390-33634_390-33633insGCGCGCGCGCGCGCGCGCGCGCGC	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	1/4			chr2	TogoVar
TACR1_chr2_75041463_75204520	75154401	A A	AGCGCGCT others(17): Show AGCGCGCTCGCGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02809.hp2 HG03098.hp2 others(1): Show HG02647.hp2 HG02809.hp2 HG03098.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0005 a0001c0001t0020 a0001c0003t0004 a0001c0001t0005 a0001c0001t0020 a0001c0003t0004	a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0020g0074 others(1): Show a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0020g0074 a0001c0003t0004g0023	4	196	0.0204	24	c.390 others(43): Show c.390-33634_390-33633insGCGCGCGCGCGCACGCGAGCGCGC	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	1/4			chr2	TogoVar
TACR1_chr2_75041463_75204520	75154410	G G	GCGTGCGC others(17): Show GCGTGCGCGCGCGCGCGCGCGCGCA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0169 a0001c0001t0006g0169	1	218	0.0046	24	c.390 others(43): Show c.390-33643_390-33642insTGCGCGCGCGCGCGCGCGCGCACG	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	1/4			chr2	TogoVar
TACR1_chr2_75041463_75204520	75154488	C C	CCACACAC others(17): Show CCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0187 a0001c0002t0001g0187	1	173	0.0058	24	c.390 others(43): Show c.390-33744_390-33721dupTGTGTGTGTGTGTGTGTGTGTGTG	TACR1	ENSG00000115353.11	transcript	ENST00000305249.10	protein_coding	1/4			chr2	TogoVar
TACR2_chr10_69398903_69421918	69409892	T T	TATATATA others(17): Show TATATATATATATATACATATATAC	intron_variant intron_variant	MODIFIER	HG01123.hp1 NA19058.hp2 HG01123.hp1 NA19058.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0090 a0002c0002t0001g0103 a0002c0002t0001g0090 a0002c0002t0001g0103	2	376	0.0053	24	c.588 others(39): Show c.588-818_588-817insGTATATATGTATATATATATATAT	TACR2	ENSG00000075073.16	transcript	ENST00000373306.5	protein_coding	2/4			chr10	TogoVar
TACR2_chr10_69398903_69421918	69409894	T T	TATATATA others(17): Show TATATATATATATATACATATATAC	intron_variant intron_variant	MODIFIER	NA19088.hp1 NA19088.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0105 a0002c0002t0001g0105	1	378	0.0026	24	c.588 others(39): Show c.588-820_588-819insGTATATATGTATATATATATATAT	TACR2	ENSG00000075073.16	transcript	ENST00000373306.5	protein_coding	2/4			chr10	TogoVar
TACR3_chr4_103581031_103724985	103722655	G G	GCCCTCTC others(17): Show GCCCTCTCCCTCTCCCTCTCCCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 NA18906.hp2 HG02486.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0274 a0001c0001t0025g0275 a0001c0001t0025g0274 a0001c0001t0025g0275	2	149	0.0134	24	c.-29 others(35): Show c.-2981_-2980insAGAGGGAGAGGGAGAGGGAGAGGG	TACR3	ENSG00000169836.5	transcript	ENST00000304883.3	protein_coding		2671		chr4	TogoVar
TAF11L2_chr5_17493231_17503827	17493385	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00735.hp2 HG01169.hp1 others(9): Show HG00408.hp2 HG00735.hp2 HG01169.hp1 HG02071.hp1 HG02132.hp1 HG02293.hp2 HG02300.hp2 HG03209.hp2 HG04228.hp1 NA18981.hp2 NA19001.hp1 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0001t0001g0000 a0001c0002t0001g0000	12	34	0.3529	24	c.-48 others(35): Show c.-4846_-4845insATATATATATATATATATATATAT	TAF11L2	ENSG00000284373.1	transcript	ENST00000639081.1	protein_coding		4845		chr5	TogoVar
TAF15_chr17_35804484_35852242	35834740	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04115.hp2 NA18906.hp2 HG04115.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0038 a0001c0002t0001g0053 a0001c0002t0001g0038 a0001c0002t0001g0053	2	170	0.0118	24	c.673 others(39): Show c.673+164_673+165insTTTTTTTTTTTTTTTTTTTTTTTT	TAF15	ENSG00000270647.7	transcript	ENST00000605844.6	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr17	TogoVar
TAF3_chr10_7813505_8021631	7863694	T T	TATATATA others(17): Show TATATATATACACATATATATACAC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0282 a0002c0002t0001g0282	1	115	0.0087	24	c.409 others(43): Show c.409+39143_409+39144insCACATATATATACACATATATATA	TAF3	ENSG00000165632.9	transcript	ENST00000344293.6	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
TAF4B_chr18_26221445_26396685	26255603	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0017 a0001c0002t0012g0017	1	85	0.0118	24	c.344 others(41): Show c.344-9552_344-9551insAAAAAAAAAAAAAAAAAAAAAAAA	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26285210	C C	CTTTCCTT others(17): Show CTTTCCTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0006	a0001c0005t0006g0253 a0001c0005t0006g0253	1	225	0.0044	24	c.973 others(39): Show c.973-669_973-668insCCTTTTTTTTTTTTTTTTTTTTTT	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26285222	G G	GTTTTTGT others(17): Show GTTTTTGTTTTTGTTTTTGTTTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0220 a0002c0004t0002g0220	1	70	0.0143	24	c.973 others(39): Show c.973-655_973-654insGTTTTTGTTTTTGTTTTTTTTTTT	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26285222	G G	GTTTTTGT others(17): Show GTTTTTGTTTTTGTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01496.hp2 HG03098.hp1 HG01346.hp1 HG01496.hp2 HG03098.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0028 a0002c0004t0002 a0002c0004t0028	a0002c0004t0002g0217 a0002c0004t0002g0241 a0002c0004t0028g0216 a0002c0004t0002g0217 a0002c0004t0002g0241 a0002c0004t0028g0216	3	72	0.0417	24	c.973 others(39): Show c.973-655_973-654insGTTTTTGTTTTTTTTTTTTTTTTT	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26300307	T T	TTTATTAT others(17): Show TTTATTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0009 a0009	a0009c0017 a0009c0017	a0009c0017t0029 a0009c0017t0029	a0009c0017t0029g0156 a0009c0017t0029g0156	1	168	0.0060	24	c.183 others(43): Show c.1832+6783_1832+6806dupTTATTATTATTATTATTATTATTA	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26346759	G G	GTGTATAT others(17): Show GTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0084 a0001c0001t0014g0084	1	213	0.0047	24	c.231 others(45): Show c.2317-10930_2317-10929insGTATATATATATATATATATATAT	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF4B_chr18_26221445_26396685	26346901	G G	GTGTATAT others(17): Show GTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0006 a0001c0002t0007g0006	1	145	0.0069	24	c.231 others(45): Show c.2317-10786_2317-10785insATATATATATATATATATATATGT	TAF4B	ENSG00000141384.13	transcript	ENST00000269142.10	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr18	TogoVar
TAF6L_chr11_62766396_62792342	62779952	C C	CTACATAT others(17): Show CTACATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0108 a0001c0001t0002g0108	1	304	0.0033	24	c.531 others(39): Show c.531+991_531+992insCATATATATATATATATATATATA	TAF6L	ENSG00000162227.8	transcript	ENST00000294168.8	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
TAF6L_chr11_62766396_62792342	62779976	A A	ATATATAT others(17): Show ATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02132.hp2 HG02040.hp1 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0001t0002g0003 a0001c0001t0002g0011	2	160	0.0125	24	c.531 others(41): Show c.531+1014_531+1015insATATATATATATATATTTTTTTTT	TAF6L	ENSG00000162227.8	transcript	ENST00000294168.8	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
TAF6L_chr11_62766396_62792342	62779976	A A	ATATATAT others(17): Show ATATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0103 a0001c0001t0002g0103	1	159	0.0063	24	c.531 others(41): Show c.531+1014_531+1015insATATATATATATTTTTTTTTTTTT	TAF6L	ENSG00000162227.8	transcript	ENST00000294168.8	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
TAFA1_chr3_67999247_68550621	68254133	G G	GTATGTAT others(17): Show GTATGTATGTATGTATGTATCTATC	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02293.hp2 HG02965.hp2 others(5): Show HG02129.hp1 HG02293.hp2 HG02965.hp2 HG03834.hp1 HG04184.hp2 HG04228.hp1 NA18994.hp1 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0011	a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0086 others(5): Show a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0002g0056 a0001c0001t0003g0077 a0001c0001t0003g0136 a0001c0001t0009g0153 a0001c0001t0011g0115	8	124	0.0645	24	c.119 others(45): Show c.119-163144_119-163143insGTATGTATGTATGTATCTATCTAT	TAFA1	ENSG00000183662.12	transcript	ENST00000478136.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
TAFA1_chr3_67999247_68550621	68439412	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03486.hp2 HG03239.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0119 a0001c0001t0005g0062 a0001c0001t0004g0119 a0001c0001t0005g0062	2	7	0.2857	24	c.259 others(43): Show c.259+22001_259+22024dupATATATATATATATATATATATAT	TAFA1	ENSG00000183662.12	transcript	ENST00000478136.6	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
TAFA1_chr3_67999247_68550621	68461360	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03195.hp1 NA18964.hp1 others(2): Show HG02300.hp1 HG03195.hp1 NA18964.hp1 NA18964.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0079 a0001c0001t0002g0014 a0001c0001t0002g0037 others(2): Show a0001c0001t0001g0079 a0001c0001t0002g0014 a0001c0001t0002g0037 a0001c0001t0002g0059 a0001c0001t0005g0027	5	32	0.1563	24	c.259 others(43): Show c.259+43960_259+43961insATATATATATATATATATATATAT	TAFA1	ENSG00000183662.12	transcript	ENST00000478136.6	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr3	TogoVar

Search by Variant

Search

Search Results