Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THEG_chr19_356747_381026	377137	C C	CCCACCCA others(17): Show CCCACCCAGCCTCTCCCCCCCTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18993.hp2 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0062 a0001c0001t0002g0062	1	317	0.0032	24	c.-11 others(35): Show c.-1168_-1167insCACAGGGGGGGAGAGGCTGGGTGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1112		chr19	TogoVar
THEG_chr19_356747_381026	377137	C C	CCCCACCC others(17): Show CCCCACCCAGCCTCTCCCCCCTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19066.hp1 NA19091.hp2 NA19066.hp1 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0285 a0002c0002t0001g0249 a0001c0001t0001g0285 a0002c0002t0001g0249	2	318	0.0063	24	c.-11 others(35): Show c.-1168_-1167insCACAGGGGGGAGAGGCTGGGTGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1112		chr19	TogoVar
THEG_chr19_356747_381026	377205	C C	CCCCCCTG others(17): Show CCCCCCTGTGCCCCACCCAGCCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0199 a0001c0001t0003g0199	1	368	0.0027	24	c.-12 others(35): Show c.-1236_-1235insAGAGGCTGGGTGGGGCACAGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1180		chr19	TogoVar
THEG_chr19_356747_381026	377282	C C	CCCCCCTG others(17): Show CCCCCCTGTGCCCCACCCAGCCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19002.hp2 NA19002.hp2	a0014 a0014	a0014c0016 a0014c0016	a0014c0016t0032 a0014c0016t0032	a0014c0016t0032g0140 a0014c0016t0032g0140	1	329	0.0030	24	c.-13 others(35): Show c.-1313_-1312insAGAGGCTGGGTGGGGCACAGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1257		chr19	TogoVar
THEG_chr19_356747_381026	377283	C C	CCCCTCTG others(17): Show CCCCTCTGTGCCCCACCCAGCCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 NA18942.hp2 HG00609.hp2 NA18942.hp2	a0001 a0003 a0001 a0003	a0001c0017 a0003c0003 a0001c0017 a0003c0003	a0001c0017t0001 a0003c0003t0001 a0001c0017t0001 a0003c0003t0001	a0001c0017t0001g0141 a0003c0003t0001g0331 a0001c0017t0001g0141 a0003c0003t0001g0331	2	350	0.0057	24	c.-13 others(35): Show c.-1314_-1313insAGAGGCTGGGTGGGGCACAGAGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1258		chr19	TogoVar
THEG_chr19_356747_381026	377320	C C	CCCCACCC others(17): Show CCCCACCCAGCCTCTCCCCCCCGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0119 a0001c0001t0027g0119	1	333	0.0030	24	c.-13 others(35): Show c.-1351_-1350insCACGGGGGGGAGAGGCTGGGTGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1295		chr19	TogoVar
THEG_chr19_356747_381026	377502	C C	CCCCACCC others(17): Show CCCCACCCAGCCTCTCCCCCCTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0024 a0002c0002t0001g0024	1	318	0.0031	24	c.-15 others(35): Show c.-1533_-1532insCACAGGGGGGAGAGGCTGGGTGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1477		chr19	TogoVar
THEM4_chr1_151865866_151914511	151867582	C C	CTCCTCTT others(17): Show CTCCTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02132.hp1 HG03491.hp1 NA18947.hp2 others(3): Show HG02132.hp1 HG03491.hp1 NA18947.hp2 NA19064.hp1 NA19077.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0046 a0001c0001t0001 a0001c0001t0046	a0001c0001t0001g0001 a0001c0001t0046g0063 a0001c0001t0001g0001 a0001c0001t0046g0063	6	146	0.0411	24	c.73 others(35): Show c.7305_*7306insAGAAGAAGAAGAAGAAGAAGAGGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3283		chr1	TogoVar
THEM4_chr1_151865866_151914511	151867588	C C	CTCCTCTT others(17): Show CTCCTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp2 HG02559.hp1 HG03453.hp1 others(9): Show HG02083.hp2 HG02559.hp1 HG03453.hp1 HG03540.hp1 NA18951.hp1 NA18967.hp2 NA18981.hp1 NA18989.hp2 NA18999.hp2 NA19007.hp2 NA19060.hp2 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0053 a0002c0002t0001 a0001c0001t0001 a0001c0001t0053 a0002c0002t0001	a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0024 others(7): Show a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0070 a0001c0001t0001g0082 a0001c0001t0053g0080 a0002c0002t0001g0277	12	62	0.1935	24	c.72 others(35): Show c.7299_*7300insAGAAGAAGAAGAAGAAGAAGAGGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3277		chr1	TogoVar
THEM4_chr1_151865866_151914511	151878889	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00597.hp2 HG00741.hp2 others(21): Show HG00544.hp2 HG00597.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01099.hp2 HG01106.hp2 HG01934.hp2 HG01978.hp2 HG02523.hp1 HG02602.hp2 HG03139.hp2 HG03688.hp1 HG03834.hp2 NA18951.hp2 NA18952.hp2 NA18961.hp1 NA18968.hp1 NA18973.hp1 NA18974.hp1 NA19064.hp2 NA19070.hp2 NA19078.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0018 a0001c0001t0022 a0001c0001t0032 a0001c0001t0049 a0001c0007t0003	a0001c0001t0002g0121 a0001c0001t0002g0237 a0001c0001t0002g0238 others(16): Show a0001c0001t0002g0121 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0003g0004 a0001c0001t0003g0036 a0001c0001t0003g0136 a0001c0001t0003g0159 a0001c0001t0003g0161 a0001c0001t0004g0114 a0001c0001t0004g0117 a0001c0001t0005g0172 a0001c0001t0006g0164 a0001c0001t0018g0128 a0001c0001t0022g0245 a0001c0001t0032g0152 a0001c0001t0049g0188 a0001c0007t0003g0167	24	82	0.2927	24	c.558 others(41): Show c.558-1765_558-1764insGTGTGTGTGTGTGTGTGTGTGTGT	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding	4/5			chr1	TogoVar
THEM4_chr1_151865866_151914511	151878891	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0257 a0001c0001t0013g0257	1	47	0.0213	24	c.558 others(41): Show c.558-1790_558-1767dupGTGTGTGTGTGTGTGTGTGTGTGT	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding	4/5			chr1	TogoVar
THEM6_chr8_142722223_142741927	142732161	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02630.hp1 NA19067.hp1 HG00741.hp1 HG02630.hp1 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0013 a0001c0001t0003 a0001c0001t0013	a0001c0001t0003g0036 a0001c0001t0013g0080 a0001c0001t0003g0036 a0001c0001t0013g0080	3	91	0.0330	24	c.514 others(41): Show c.514-3142_514-3119dupATATATATATATATATATATATAT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr8	TogoVar
THEM6_chr8_142722223_142741927	142740984	G G	GGAAGGCA others(17): Show GGAAGGCAGAGGGCGCCCCTGGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0023 a0001c0001t0002g0023	1	412	0.0024	24	c.55 others(35): Show c.5545_*5546insGAAGGCAGAGGGCGCCCCTGGTGT	THEM6	ENSG00000130193.8	transcript	ENST00000336138.4	protein_coding		4058		chr8	TogoVar
THEMIS_chr6_127703200_127906058	127731864	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0205 a0002c0001t0001g0205	1	6	0.1667	24	c.175 others(45): Show c.1759-12042_1759-12041insAAAAAAAAAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127862428	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19076.hp2 NA19076.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0197 a0001c0002t0001g0197	1	55	0.0182	24	c.92- others(39): Show c.92-7241_92-7240insAAAAAAAAAAAAAAAAAAAAAAAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	1/5			chr6	TogoVar
THNSL1_chr10_25011612_25031664	25020238	A A	ATATATCT others(17): Show ATATATCTATATCTATATCTATATC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02976.hp1 HG03225.hp1 others(1): Show HG02109.hp1 HG02976.hp1 HG03225.hp1 HG03486.hp1	a0001 a0010 a0001 a0010	a0001c0003 a0010c0013 a0001c0003 a0010c0013	a0001c0003t0003 a0010c0013t0001 a0001c0003t0003 a0010c0013t0001	a0001c0003t0003g0036 a0001c0003t0003g0079 a0010c0013t0001g0080 a0001c0003t0003g0036 a0001c0003t0003g0079 a0010c0013t0001g0080	4	332	0.0120	24	c.-21 others(43): Show c.-215-1486_-215-1463dupCTATATCTATATCTATATCTATAT	THNSL1	ENSG00000185875.13	transcript	ENST00000376356.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
THNSL2_chr2_88165346_88191627	88181228	C C	CCTCTCTC others(17): Show CCTCTCTCTCTCCTCTCTCCTCTCT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01943.hp2 HG02735.hp2 others(2): Show HG00140.hp2 HG01943.hp2 HG02735.hp2 HG03209.hp2 NA19081.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0024 others(2): Show a0002c0002t0001g0019 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0028 a0002c0002t0001g0053	5	25	0.2000	24	c.803 others(41): Show c.803-1453_803-1452insCTCTCTCTCTCTCTCTCCTCTCTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THNSL2_chr2_88165346_88191627	88181528	C C	CCCTCTCT others(17): Show CCCTCTCTCTCTCTCCTCTCTCTCT	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0010 a0001c0001t0005g0010	1	45	0.0222	24	c.803 others(41): Show c.803-1161_803-1160insTCTCCTCTCTCTCTCCTCTCTCTC	THNSL2	ENSG00000144115.18	transcript	ENST00000674334.2	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
THOP1_chr19_2780503_2820807	2820684	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00423.hp2 HG00558.hp1 others(56): Show HG00099.hp1 HG00423.hp2 HG00558.hp1 HG00621.hp1 HG00673.hp1 HG01123.hp2 HG01346.hp2 HG01361.hp2 HG01884.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG02165.hp1 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02895.hp2 HG03225.hp2 HG03239.hp2 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04199.hp2 HG04228.hp1 HG06807.hp2 NA18747.hp2 NA18940.hp1 NA18940.hp2 NA18944.hp1 NA18944.hp2 NA18950.hp1 NA18950.hp2 NA18953.hp2 NA18954.hp1 NA18957.hp1 NA18961.hp1 NA18964.hp1 NA18965.hp1 NA18971.hp2 NA18975.hp2 NA18979.hp1 NA18988.hp1 NA18990.hp2 NA18995.hp1 NA18997.hp1 NA19000.hp2 NA19056.hp1 NA19065.hp1 NA19067.hp1 NA19070.hp2 NA19083.hp1 NA19090.hp1 NA20752.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0023 a0003c0003t0012	a0001c0001t0001g0001 a0001c0001t0001g0117 a0001c0001t0001g0124 others(41): Show a0001c0001t0001g0001 a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0128 a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0008 a0001c0001t0002g0013 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0043 a0001c0001t0002g0165 a0001c0001t0002g0169 a0001c0001t0002g0172 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0193 a0001c0001t0002g0200 a0001c0001t0002g0203 a0001c0001t0002g0207 a0001c0001t0002g0209 a0001c0001t0002g0213 a0001c0001t0002g0225 a0001c0001t0003g0171 a0001c0001t0005g0006 a0001c0001t0007g0002 a0001c0001t0007g0188 a0001c0001t0007g0190 a0001c0001t0007g0202 a0001c0001t0012g0216 a0001c0001t0015g0013 a0001c0001t0016g0198 a0001c0001t0023g0167 a0003c0003t0012g0002	59	249	0.2369	24	c.74 others(35): Show c.7408_*7409insTTTTTTTTTTTTTTTTTTTTTTTT	THOP1	ENSG00000172009.15	transcript	ENST00000307741.11	protein_coding		4878		chr19	TogoVar
THRAP3_chr1_36219443_36310357	36253760	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02080.hp2 HG00558.hp1 HG02080.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0206 a0001c0006t0001g0210 a0001c0006t0001g0206 a0001c0006t0001g0210	2	29	0.0690	24	c.-13 others(43): Show c.-134-5603_-134-5602insTTTTTTTTTTTTTTTTTTTTTTTT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36270570	G G	GGGTTTTT others(17): Show GGGTTTTTTTTTTGTTTGTTTGTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0016 a0006c0009t0016	a0006c0009t0016g0006 a0006c0009t0016g0006	1	242	0.0041	24	c.-32 others(43): Show c.-32+11087_-32+11088insGTTTTTTTTTTGTTTGTTTGTTTG	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36270571	G G	GGTTTTTT others(17): Show GGTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02922.hp2 HG06807.hp2 HG01071.hp1 HG02922.hp2 HG06807.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0025 a0003c0004t0002g0028 a0003c0004t0002g0030 a0003c0004t0002g0025 a0003c0004t0002g0028 a0003c0004t0002g0030	3	219	0.0137	24	c.-32 others(43): Show c.-32+11087_-32+11088insGTTTTTTTTTTTTTTTTTTTTTTT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	2/11			chr1	TogoVar
THRAP3_chr1_36219443_36310357	36295554	T T	TTCCTTCC others(17): Show TTCCTTCCTTCCTTCCTTCCTTCCC	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0232 a0001c0001t0001g0232	1	229	0.0044	24	c.211 others(43): Show c.2116-1024_2116-1001dupTCCTTCCTTCCTTCCTTCCCTCCT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRAP3_chr1_36219443_36310357	36295579	T T	TCCTTCCC others(17): Show TCCTTCCCTCCTCCCTTCCTTCCTC	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG03041.hp2 HG01934.hp2 HG03041.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0001 a0006c0009t0016 a0001c0001t0001 a0006c0009t0016	a0001c0001t0001g0079 a0006c0009t0016g0006 a0001c0001t0001g0079 a0006c0009t0016g0006	2	243	0.0082	24	c.211 others(43): Show c.2116-1001_2116-1000insTCCCTCCTCCCTTCCTTCCTCCCT	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRA_chr17_40057965_40098002	40069079	C C	CCTCCCTC others(17): Show CCTCCCTCTCTCCCTCCCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0225 a0001c0002t0006g0225	1	356	0.0028	24	c.-29 others(43): Show c.-297-5105_-297-5082dupTCTCCCTCCCTCTCTCTCTCCCTC	THRA	ENSG00000126351.13	transcript	ENST00000450525.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
THRB_chr3_24112153_24499850	24168490	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02895.hp1 HG01884.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0003 a0001c0001t0004 a0001c0002t0003	a0001c0001t0004g0174 a0001c0002t0003g0032 a0001c0001t0004g0174 a0001c0002t0003g0032	2	128	0.0156	24	c.284 others(43): Show c.284-16001_284-16000insATATATATATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24188858	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02015.hp2 HG02258.hp1 others(5): Show HG00544.hp1 HG02015.hp2 HG02258.hp1 HG02809.hp1 HG03098.hp2 HG03471.hp1 HG03486.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 others(5): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 a0001c0001t0013 a0001c0001t0020 a0001c0001t0041 a0001c0001t0052 a0001c0002t0012	a0001c0001t0001g0042 a0001c0001t0007g0065 a0001c0001t0012g0141 others(5): Show a0001c0001t0001g0042 a0001c0001t0007g0065 a0001c0001t0012g0141 a0001c0001t0013g0004 a0001c0001t0020g0156 a0001c0001t0041g0017 a0001c0001t0052g0007 a0001c0002t0012g0138	8	57	0.1404	24	c.283 others(41): Show c.283+1192_283+1215dupATATATATATATATATATATATAT	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THSD1_chr13_52372167_52411172	52375612	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0038 a0002c0003t0003g0038	1	260	0.0038	24	c.17 others(35): Show c.1798_*1799insTTTTTTTTTTTTTTTTTTTTTTTT	THSD1	ENSG00000136114.17	transcript	ENST00000258613.5	protein_coding		1554		chr13	TogoVar
THSD4_chr15_71110471_71788383	71263331	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03139.hp2 HG01884.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0037 a0001c0001t0008 a0001c0001t0037	a0001c0001t0008g0037 a0001c0001t0037g0106 a0001c0001t0008g0037 a0001c0001t0037g0106	2	3	0.6667	24	c.101 others(43): Show c.1015+6632_1015+6633insTATATATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326684	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	116	0.0086	24	c.101 others(45): Show c.1015+69970_1015+69971insTATATATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326696	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0027 a0003c0010t0027	a0003c0010t0027g0088 a0003c0010t0027g0088	1	92	0.0109	24	c.101 others(45): Show c.1015+69982_1015+69983insTATATATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAAAAAAA others(17): Show AAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0006 a0001c0001t0034g0006	1	22	0.0455	24	c.101 others(45): Show c.1015+69986_1015+69987insAAAAAATATATATATATATATATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71332892	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0033 a0002c0005t0033	a0002c0005t0033g0040 a0002c0005t0033g0040	1	4	0.2500	24	c.101 others(45): Show c.1015+76193_1015+76194insTTTTTTTTTTTTTTTTTTTTTTTT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71365131	T T	TTGTGTGT others(17): Show TTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0007 a0001c0006t0007	a0001c0006t0007g0030 a0001c0006t0007g0030	1	19	0.0526	24	c.101 others(45): Show c.1016-46544_1016-46521dupGTGTGTGTGTGTGTGTGTGTGTGT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71427241	A A	ACACTGGG others(17): Show ACACTGGGCAAGGCACTGGGCAAGG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(34): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00621.hp2 HG00642.hp2 HG01081.hp2 HG01255.hp2 HG01346.hp2 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02145.hp2 HG02451.hp1 HG02451.hp2 HG02683.hp1 HG02738.hp1 HG02818.hp1 HG02970.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03710.hp2 HG06807.hp2 NA19009.hp1 NA19009.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0008 a0001c0009 a0001c0020 a0002c0005 a0002c0011 a0003c0010 a0005c0022	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(28): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0037 a0001c0001t0042 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0009 a0001c0002t0016 a0001c0003t0002 a0001c0003t0014 a0001c0004t0007 a0001c0004t0017 a0001c0004t0026 a0001c0004t0029 a0001c0004t0044 a0001c0006t0001 a0001c0006t0005 a0001c0008t0005 a0001c0008t0007 a0001c0009t0006 a0001c0020t0002 a0002c0005t0002 a0002c0005t0004 a0002c0011t0004 a0003c0010t0027 a0005c0022t0032	a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0033 others(34): Show a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0042 a0001c0001t0006g0080 a0001c0001t0008g0037 a0001c0001t0010g0053 a0001c0001t0010g0074 a0001c0001t0011g0001 a0001c0001t0011g0094 a0001c0001t0012g0049 a0001c0001t0012g0054 a0001c0001t0037g0106 a0001c0001t0042g0104 a0001c0002t0002g0018 a0001c0002t0005g0045 a0001c0002t0006g0026 a0001c0002t0009g0091 a0001c0002t0016g0084 a0001c0003t0002g0079 a0001c0003t0014g0116 a0001c0004t0007g0062 a0001c0004t0017g0032 a0001c0004t0026g0061 a0001c0004t0029g0086 a0001c0004t0044g0029 a0001c0006t0001g0063 a0001c0006t0005g0068 a0001c0008t0005g0083 a0001c0008t0007g0081 a0001c0009t0006g0015 a0001c0020t0002g0082 a0002c0005t0002g0044 a0002c0005t0004g0113 a0002c0011t0004g0048 a0003c0010t0027g0088 a0005c0022t0032g0014	37	82	0.4512	24	c.115 others(45): Show c.1152+15426_1152+15449dupCAAGGCACTGGGCAAGGCACTGGG	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442610	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0107 a0002c0005t0004g0107	1	97	0.0103	24	c.115 others(45): Show c.1152+30788_1152+30789insATATATATATATATATATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442660	G G	GTGTATAT others(17): Show GTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0009 a0001c0001t0028g0009	1	59	0.0169	24	c.115 others(45): Show c.1152+30838_1152+30839insGTATATATATATATATATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71442660	G G	GTGTGTGT others(17): Show GTGTGTGTATGTATGTATATATATA	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG03834.hp2 HG02735.hp1 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0009 a0001c0001t0006 a0001c0001t0009	a0001c0001t0006g0021 a0001c0001t0009g0085 a0001c0001t0006g0021 a0001c0001t0009g0085	2	60	0.0333	24	c.115 others(45): Show c.1152+30838_1152+30839insGTGTGTATGTATGTATATATATAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71532263	T T	TGAGAGAG others(17): Show TGAGAGAGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0085 a0001c0001t0009g0085	1	66	0.0152	24	c.115 others(47): Show c.1152+120461_1152+120462insAGAGAGAGAGAGAGAGAGAGAG AG	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71532283	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGAGAGAGAGT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01346.hp1 HG02300.hp1 HG00280.hp2 HG01346.hp1 HG02300.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0009 a0004c0018 a0001c0001 a0001c0009 a0004c0018	a0001c0001t0001 a0001c0009t0006 a0004c0018t0006 a0001c0001t0001 a0001c0009t0006 a0004c0018t0006	a0001c0001t0001g0067 a0001c0009t0006g0015 a0004c0018t0006g0058 a0001c0001t0001g0067 a0001c0009t0006g0015 a0004c0018t0006g0058	3	64	0.0469	24	c.115 others(47): Show c.1152+120461_1152+120462insAGAGAGAGAGAGAGAGAGAGAG TG	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71532283	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGAGTGTGTGT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	62	0.0161	24	c.115 others(47): Show c.1152+120461_1152+120462insAGAGAGAGAGAGAGAGTGTGTG TG	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	7/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD7A_chr7_11365365_11837198	11509821	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG03654.hp1 NA20805.hp2 HG02083.hp1 HG03654.hp1 NA20805.hp2	a0005 a0006 a0018 a0005 a0006 a0018	a0005c0025 a0006c0015 a0018c0043 a0005c0025 a0006c0015 a0018c0043	a0005c0025t0048 a0006c0015t0002 a0018c0043t0033 a0005c0025t0048 a0006c0015t0002 a0018c0043t0033	a0005c0025t0048g0040 a0006c0015t0002g0048 a0018c0043t0033g0138 a0005c0025t0048g0040 a0006c0015t0002g0048 a0018c0043t0033g0138	3	60	0.0500	24	c.182 others(45): Show c.1823-27840_1823-27839insTTTTTTTTTTTTTTTTTTTTTTTT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	6/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11512942	G G	GATATATA others(17): Show GATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0062 a0001c0003t0062	a0001c0003t0062g0167 a0001c0003t0062g0167	1	78	0.0128	24	c.182 others(45): Show c.1822+28476_1822+28477insATATATATATATATATATATATAT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	6/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11546195	G G	GGCGTGTG others(17): Show GGCGTGTGTGTGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0008 a0008	a0008c0018 a0008c0018	a0008c0018t0013 a0008c0018t0013	a0008c0018t0013g0133 a0008c0018t0013g0133	1	152	0.0066	24	c.145 others(43): Show c.1454-3079_1454-3078insGCGCGCGCGCGCACACACACACGC	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	4/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11566965	T T	TAGCGGGA others(17): Show TAGCGGGAGGGGGGGGGGGGGCGGG	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0154 a0001c0002t0039g0154	1	17	0.0588	24	c.145 others(45): Show c.1453+23494_1453+23495insCCCGCCCCCCCCCCCCCTCCCGCT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	4/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11566965	T T	TAGCGGGG others(17): Show TAGCGGGGGGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0128 a0003c0004t0002g0128	1	17	0.0588	24	c.145 others(45): Show c.1453+23494_1453+23495insCCCCCCCCCCCCCCCCCCCCCGCT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	4/27			chr7	TogoVar
THSD7B_chr2_136760545_137682718	136767456	A A	AGTGTGTG others(17): Show AGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	35	0.0286	24	c.-36 others(41): Show c.-36+1770_-36+1793dupGTGTGTGTGTGTGTGTGTGTGTGT	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr2	TogoVar
THSD7B_chr2_136760545_137682718	136825718	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0008 a0008	a0008c0042 a0008c0042	a0008c0042t0006 a0008c0042t0006	a0008c0042t0006g0043 a0008c0042t0006g0043	1	32	0.0313	24	c.-35 others(43): Show c.-35-56410_-35-56409insTTTTTTTTTTTTTTTTTTTTTTTT	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr2	TogoVar
THSD7B_chr2_136760545_137682718	136844462	C C	CAGAGAGA others(17): Show CAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0003 a0003	a0003c0018 a0003c0018	a0003c0018t0001 a0003c0018t0001	a0003c0018t0001g0046 a0003c0018t0001g0046	1	43	0.0233	24	c.-35 others(43): Show c.-35-37672_-35-37649dupGAGAGAGAGAGAGAGAGAGAGAGA	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr2	TogoVar
THSD7B_chr2_136760545_137682718	136851933	C C	CTATATAT others(17): Show CTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0003 a0003	a0003c0025 a0003c0025	a0003c0025t0001 a0003c0025t0001	a0003c0025t0001g0006 a0003c0025t0001g0006	1	9	0.1111	24	c.-35 others(43): Show c.-35-30194_-35-30193insATATATATATATATATATATATAT	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr2	TogoVar

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