Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZYG11B_chr1_52721453_52832336	52803093	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0241 a0001c0002t0003g0241	1	352	0.0028	26	c.169 others(43): Show c.1695+959_1695+960insTATATATATATATATATACACATATA		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	10/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYX_chr7_143376345_143396111	143385660	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	454	0.0022	26	c.102 others(45): Show c.1023+2339_1023+2364dupTTTTTTTTTTTTTTTTTTTTTTTTTT		ZYX	ENSG00000159840.16	transcript	ENST00000322764.10	protein_coding	5/9					INFO_REALIGN_3_PRIME	chr7	TogoVar