Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTK2_chr8_140652900_141006282	140935702	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02717.hp2 HG03098.hp2 HG02280.hp1 HG02717.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0008 a0001c0001t0007 a0001c0001t0008	a0001c0001t0007g0003 a0001c0001t0007g0005 a0001c0001t0008g0004 a0001c0001t0007g0003 a0001c0001t0007g0005 a0001c0001t0008g0004	3	290	0.0103	28	c.-12 others(47): Show c.-121-9954_-121-9953insAAAAAAAAAAAAAAAAAAAAAAAAAA AA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	1/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	141000087	T T	TCACACAC others(21): Show TCACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0006 a0006	a0006c0013 a0006c0013	a0006c0013t0001 a0006c0013t0001	a0006c0013t0001g0254 a0006c0013t0001g0254	1	290	0.0035	28	c.-12 others(47): Show c.-122+1010_-122+1037dupTGTGTGTGTGTGTGTGTGTGTGTGTG TG	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	1/35			chr8	TogoVar
PTK7_chr6_43071314_43166715	43157364	A A	ATATATAT others(21): Show ATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	272	0.0037	28	c.272 others(47): Show c.2722-1452_2722-1451insATATATATATATATATATTTTTTTTT TT	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
PTN_chr7_137222341_137348733	137280699	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	296	0.0034	28	c.-1- others(45): Show c.-1-25726_-1-25725insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTN_chr7_137222341_137348733	137324433	A A	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03209.hp2 HG03195.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0157 a0001c0001t0001g0158	2	296	0.0068	28	c.-2+ others(45): Show c.-2+19005_-2+19006insATATATATATATATATATATATTTTTTT	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTP4A2_chr1_31901421_31943368	31916345	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0073 a0001c0001t0073	a0001c0001t0073g0013 a0001c0001t0073g0013	1	354	0.0028	28	c.97- others(41): Show c.97-359_97-358insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	2/5			chr1	TogoVar
PTPA_chr9_129106415_129153946	129129118	T T	TGCCACAG others(21): Show TGCCACAGGACAGGCCAGGGACTGGGCTG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0203	1	334	0.0030	28	c.342 others(41): Show c.342+11_342+38dupCACAGGACAGGCCAGGGACTGGGCTGGC	PTPA	ENSG00000119383.21	transcript	ENST00000393370.7	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr9	TogoVar
PTPN12_chr7_77532295_77645069	77534969	A A	AAGACGGG others(21): Show AAGACGGGGTTGGTTTCACCATATTGGCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0242 a0003c0003t0001g0242	1	310	0.0032	28	c.-25 others(39): Show c.-2578_-2577insAGACGGGGTTGGTTTCACCATATTGGCC	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding		2325		chr7	TogoVar
PTPN12_chr7_77532295_77645069	77582084	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	310	0.0032	28	c.285 others(43): Show c.285+582_285+609dupTTTTTTTTTTTTTTTTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77625468	G G	GCTCTCTC others(21): Show GCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02647.hp2 HG02109.hp1 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0164 a0001c0001t0001g0166	2	310	0.0065	28	c.102 others(47): Show c.1026-1234_1026-1233insTCTCTCTCTCTCTCTCTCTCTCTCTC TC	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77625472	G G	GCTCGCGC others(21): Show GCTCGCGCGCGCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02132.hp1 HG02523.hp1 others(1): Show HG02080.hp2 HG02132.hp1 HG02523.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 others(1): Show a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0232	4	310	0.0129	28	c.102 others(47): Show c.1026-1230_1026-1229insGCGCGCGCTCTCTCTCTCTCTCTCTC TC	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77625472	G G	GCTCGCGC others(21): Show GCTCGCGCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	310	0.0032	28	c.102 others(47): Show c.1026-1230_1026-1229insGCGCTCTCTCTCTCTCTCTCTCTCTC TC	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77625520	T T	TCTCTCTC others(21): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCA	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	310	0.0032	28	c.102 others(47): Show c.1026-1182_1026-1181insTCTCTCTCTCTCTCTCTCTCTCTCAC TC	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN14_chr1_214343700_214556602	214385475	A A	AGATTTCT others(21): Show AGATTTCTACAATCAGGCCCAACCTGATT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG02258.hp2 HG02622.hp2 others(4): Show HG00140.hp2 HG02258.hp2 HG02622.hp2 HG03195.hp1 HG03209.hp1 NA18522.hp1 NA18906.hp2	a0001 a0005 a0007 a0001 a0005 a0007	a0001c0001 a0001c0027 a0005c0007 others(1): Show a0001c0001 a0001c0027 a0005c0007 a0007c0012	a0001c0001t0010 a0001c0001t0061 a0001c0027t0149 others(3): Show a0001c0001t0010 a0001c0001t0061 a0001c0027t0149 a0005c0007t0029 a0005c0007t0185 a0007c0012t0164	a0001c0001t0010g0064 a0001c0001t0061g0124 a0001c0027t0149g0236 others(4): Show a0001c0001t0010g0064 a0001c0001t0061g0124 a0001c0027t0149g0236 a0005c0007t0029g0244 a0005c0007t0029g0245 a0005c0007t0185g0266 a0007c0012t0164g0249	7	272	0.0257	28	c.106 others(45): Show c.1067-715_1067-688dupAATCAGGTTGGGCCTGATTGTAGAAATC	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	12/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214402655	A A	AAGGGAGG others(21): Show AAGGGAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0013 a0013	a0013c0029 a0013c0029	a0013c0029t0148 a0013c0029t0148	a0013c0029t0148g0234 a0013c0029t0148g0234	1	272	0.0037	28	c.581 others(43): Show c.581+227_581+228insCCCTCCCTCCCTCCCTCCCTCCCTCCCT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	6/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214402659	A A	AAGGGAGG others(21): Show AAGGGAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0007 a0007	a0007c0012 a0007c0012	a0007c0012t0164 a0007c0012t0164	a0007c0012t0164g0249 a0007c0012t0164g0249	1	272	0.0037	28	c.581 others(43): Show c.581+223_581+224insCCCTCCCTCCCTCCCTCCCTCCCTCCCT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	6/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214402663	A A	AAGGGAGG others(21): Show AAGGGAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00741.hp2 HG01071.hp1 others(8): Show HG00642.hp1 HG00741.hp2 HG01071.hp1 HG01256.hp2 HG02451.hp1 HG02735.hp1 HG02922.hp1 HG03098.hp2 HG03130.hp2 HG03834.hp2 NA20129.hp1	a0001 a0007 a0012 a0001 a0007 a0012	a0001c0001 a0001c0028 a0007c0012 others(1): Show a0001c0001 a0001c0028 a0007c0012 a0012c0023	a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 others(7): Show a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0067 a0001c0001t0131 a0001c0001t0160 a0001c0001t0181 a0001c0028t0053 a0007c0012t0117 a0012c0023t0085	a0001c0001t0024g0233 a0001c0001t0026g0192 a0001c0001t0027g0190 others(8): Show a0001c0001t0024g0233 a0001c0001t0026g0192 a0001c0001t0027g0190 a0001c0001t0027g0217 a0001c0001t0067g0017 a0001c0001t0131g0219 a0001c0001t0160g0242 a0001c0001t0181g0267 a0001c0028t0053g0046 a0007c0012t0117g0188 a0012c0023t0085g0080	11	272	0.0404	28	c.581 others(43): Show c.581+219_581+220insCCCTCCCTCCCTCCCTCCCTCCCTCCCT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	6/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214402667	A A	AAGGGAGG others(21): Show AAGGGAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA18969.hp1 HG02145.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0090 a0001c0010t0018 a0001c0001t0090 a0001c0010t0018	a0001c0001t0090g0027 a0001c0010t0018g0108 a0001c0001t0090g0027 a0001c0010t0018g0108	2	272	0.0074	28	c.581 others(43): Show c.581+215_581+216insCCCTCCCTCCCTCCCTCCCTCCCTCCCT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	6/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214506522	A A	AAAATAAA others(21): Show AAAATAAATAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02559.hp2 HG02897.hp1 others(2): Show HG02486.hp1 HG02559.hp2 HG02897.hp1 HG03516.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 others(2): Show a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 a0001c0001t0136 a0001c0015t0154	a0001c0001t0119g0194 a0001c0001t0120g0196 a0001c0001t0121g0199 others(2): Show a0001c0001t0119g0194 a0001c0001t0120g0196 a0001c0001t0121g0199 a0001c0001t0136g0200 a0001c0015t0154g0198	5	272	0.0184	28	c.-15 others(49): Show c.-154-41566_-154-41565insATTTATTTATTTATTTATTTATTT ATTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214520065	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0120 a0001c0001t0054g0120	1	272	0.0037	28	c.-15 others(49): Show c.-155+31117_-155+31118insATATATATATATATATATTTTTTT TTTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN14_chr1_214343700_214556602	214534712	C C	CAATAAAT others(21): Show CAATAAATAAATAAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02615.hp1 HG02630.hp1 others(2): Show HG02145.hp1 HG02615.hp1 HG02630.hp1 NA18522.hp2 NA18979.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0090 a0001c0002t0006 a0002c0003t0086 others(2): Show a0001c0001t0090 a0001c0002t0006 a0002c0003t0086 a0002c0003t0170 a0002c0003t0171	a0001c0001t0090g0027 a0001c0002t0006g0098 a0002c0003t0086g0026 others(2): Show a0001c0001t0090g0027 a0001c0002t0006g0098 a0002c0003t0086g0026 a0002c0003t0170g0247 a0002c0003t0171g0252	5	272	0.0184	28	c.-15 others(49): Show c.-155+16443_-155+16470dupTATTTATTTATTTATTTATTTATT TATT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN1_chr20_50505383_50590241	50532715	G G	GGGGTGTG others(21): Show GGGGTGTGTGTGTGTGTCTGTCTATGTGT	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	336	0.0030	28	c.63+ others(45): Show c.63+22131_63+22158dupTGTGTGTGTGTCTGTCTATGTGTGGGTG	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN1_chr20_50505383_50590241	50554380	A A	ATCTCTCT others(21): Show ATCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03225.hp1 HG02486.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0310 a0001c0001t0008g0312 a0001c0001t0001g0310 a0001c0001t0008g0312	2	336	0.0060	28	c.64- others(43): Show c.64-6982_64-6955dupTCTCTCTCTCTCTCTCTCTCTCTCTCTC	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN2_chr18_12787152_12889237	12807586	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0344 a0001c0001t0001g0344	1	370	0.0027	28	c.859 others(45): Show c.859-5436_859-5435insATATATATATTTTTTTTTTTTTTTTTTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	7/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12807586	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0335 a0001c0001t0001g0335	1	370	0.0027	28	c.859 others(45): Show c.859-5436_859-5435insATATATATATATATTTTTTTTTTTTTTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	7/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12835382	C C	CTTTCTTT others(21): Show CTTTCTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0053 a0001c0001t0021g0053	1	370	0.0027	28	c.261 others(45): Show c.261+1408_261+1409insAAAAAAAAAAAAAAAAAAAAAAAAGAAA	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	3/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12835382	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp2 NA18951.hp1 HG02071.hp2 NA18951.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0239 a0001c0001t0010g0238 a0001c0001t0001g0239 a0001c0001t0010g0238	2	370	0.0054	28	c.261 others(45): Show c.261+1408_261+1409insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	3/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12870441	G G	GTGTATAT others(21): Show GTGTATATATATGTATATATATGTGTATA	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA18522.hp2 HG02809.hp2 NA18522.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0101 a0002c0002t0001g0102	2	370	0.0054	28	c.70- others(45): Show c.70-11188_70-11187insTATACACATATATATACATATATATACA	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN3_chr9_109370700_109503307	109415052	A A	ATCCGTCC others(21): Show ATCCGTCCGTCCGTCCATCCGTCCATCCG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0067 a0002c0002t0006g0067	1	290	0.0035	28	c.131 others(47): Show c.1314-4638_1314-4637insCGGATGGACGGATGGACGGACGGACG GA	PTPN3	ENSG00000070159.14	transcript	ENST00000374541.4	protein_coding	14/25			chr9	TogoVar
PTPN4_chr2_119754922_119989899	119973655	G G	GTTTTTTT others(21): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03195.hp2 HG02615.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0040 a0001c0001t0034 a0001c0001t0040	a0001c0001t0034g0032 a0001c0001t0040g0107 a0001c0001t0034g0032 a0001c0001t0040g0107	2	252	0.0079	28	c.269 others(47): Show c.2695-3302_2695-3301insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN9_chr15_75458251_75584315	75537753	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01106.hp1 HG04115.hp1 others(1): Show HG00621.hp2 HG01106.hp1 HG04115.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 a0001c0001t0020	a0001c0001t0001g0092 a0001c0001t0006g0318 a0001c0001t0010g0007 others(1): Show a0001c0001t0001g0092 a0001c0001t0006g0318 a0001c0001t0010g0007 a0001c0001t0020g0315	4	326	0.0123	28	c.64- others(45): Show c.64-10493_64-10492insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPRD_chr9_8309246_10618002	8330994	T T	TTACTTGC others(21): Show TTACTTGCTATTTATTTCTATTAACTTCA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0004 a0001c0018t0004	a0001c0018t0004g0020 a0001c0018t0004g0020	1	34	0.0294	28	c.553 others(45): Show c.5534+560_5534+587dupTGAAGTTAATAGAAATAAATAGCAAGTA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	44/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9208020	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0016 a0001c0013t0016	a0001c0013t0016g0028 a0001c0013t0016g0028	1	34	0.0294	28	c.-20 others(49): Show c.-202-24658_-202-24657insAAAAAAAAAAAAAAAAAAAAAAAA AAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9333503	A A	AGTATATA others(21): Show AGTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	34	0.0294	28	c.-20 others(49): Show c.-203+63945_-203+63946insATATATATATATATATATATATAT ATAC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9946057	G G	GTTGGGAA others(21): Show GTTGGGAAAGTCACCCTTCCCTTTCCCAC	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp2 HG01109.hp1 others(21): Show HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01243.hp2 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02257.hp1 HG02257.hp2 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03579.hp1 HG03579.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA21309.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0008 a0001c0011 a0001c0015 a0001c0017 a0001c0018 a0005c0016	a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 others(20): Show a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 a0001c0001t0019 a0001c0001t0022 a0001c0001t0024 a0001c0002t0001 a0001c0002t0005 a0001c0002t0009 a0001c0002t0011 a0001c0002t0015 a0001c0003t0004 a0001c0003t0007 a0001c0003t0023 a0001c0004t0018 a0001c0006t0001 a0001c0007t0026 a0001c0008t0021 a0001c0011t0017 a0001c0015t0025 a0001c0017t0002 a0001c0018t0004 a0005c0016t0020	a0001c0001t0002g0013 a0001c0001t0002g0018 a0001c0001t0013g0022 others(21): Show a0001c0001t0002g0013 a0001c0001t0002g0018 a0001c0001t0013g0022 a0001c0001t0014g0008 a0001c0001t0019g0023 a0001c0001t0022g0012 a0001c0001t0024g0032 a0001c0002t0001g0009 a0001c0002t0005g0025 a0001c0002t0009g0017 a0001c0002t0011g0030 a0001c0002t0015g0010 a0001c0003t0004g0027 a0001c0003t0007g0029 a0001c0003t0023g0031 a0001c0004t0018g0015 a0001c0006t0001g0019 a0001c0007t0026g0034 a0001c0008t0021g0002 a0001c0011t0017g0016 a0001c0015t0025g0033 a0001c0017t0002g0005 a0001c0018t0004g0020 a0005c0016t0020g0011	24	34	0.7059	28	c.-47 others(47): Show c.-471-7448_-471-7447insGTGGGAAAGGGAAGGGTGACTTTCCC AA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10031647	T T	TATATATA others(21): Show TATATATATATATATATACACACACACAC	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp2 HG02683.hp1 HG02683.hp2	a0001 a0001	a0001c0007 a0001c0013 a0001c0007 a0001c0013	a0001c0007t0026 a0001c0013t0016 a0001c0007t0026 a0001c0013t0016	a0001c0007t0026g0034 a0001c0013t0016g0028 a0001c0007t0026g0034 a0001c0013t0016g0028	2	34	0.0588	28	c.-47 others(47): Show c.-472+2070_-472+2071insGTGTGTGTGTGTATATATATATATAT AT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10031647	T T	TATATATA others(21): Show TATATATATATATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0006 a0004c0010t0006	a0004c0010t0006g0007 a0004c0010t0006g0007	1	34	0.0294	28	c.-47 others(47): Show c.-472+2070_-472+2071insGTGTGTGTGTATATATATATATATAT AT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10103377	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp2 HG03225.hp2 HG02257.hp2 HG02559.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0006 a0001c0001 a0001c0003 a0001c0006	a0001c0001t0002 a0001c0003t0004 a0001c0006t0001 a0001c0001t0002 a0001c0003t0004 a0001c0006t0001	a0001c0001t0002g0018 a0001c0003t0004g0027 a0001c0006t0001g0019 a0001c0001t0002g0018 a0001c0003t0004g0027 a0001c0006t0001g0019	3	34	0.0882	28	c.-54 others(49): Show c.-544-69588_-544-69587insTATATATATATATATATATATATA TATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10281355	T T	TAAGGCTG others(21): Show TAAGGCTGGCTCTCACCTTTCACAGTTAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA21309.hp2 HG02622.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0004 a0001c0002t0001g0009 a0001c0001t0001g0004 a0001c0002t0001g0009	2	34	0.0588	28	c.-54 others(49): Show c.-545+59580_-545+59607dupTTAACTGTGAAAGGTGAGAGCCAG CCTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10479652	A A	AATAAATA others(21): Show AATAAATAAATAAATAAATACATAAATAC	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0032 a0001c0001t0024g0032	1	34	0.0294	28	c.-60 others(51): Show c.-600+132745_-600+132746insGTATTTATGTATTTATTTATTT ATTTAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10509557	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0017 a0001c0002t0009g0017	1	34	0.0294	28	c.-60 others(51): Show c.-600+102840_-600+102841insTATATATATATATATATATATA TATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10564171	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01981.hp2 HG02683.hp2 others(1): Show HG01109.hp1 HG01981.hp2 HG02683.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0015 others(1): Show a0001c0001 a0001c0007 a0001c0015 a0001c0017	a0001c0001t0019 a0001c0007t0026 a0001c0015t0025 others(1): Show a0001c0001t0019 a0001c0007t0026 a0001c0015t0025 a0001c0017t0002	a0001c0001t0019g0023 a0001c0007t0026g0034 a0001c0015t0025g0033 others(1): Show a0001c0001t0019g0023 a0001c0007t0026g0034 a0001c0015t0025g0033 a0001c0017t0002g0005	4	34	0.1177	28	c.-60 others(49): Show c.-600+48226_-600+48227insAAAAAAAAAAAAAAAAAAAAAAAA AAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRE_chr10_127902103_128090855	127944500	A A	ATGGATGG others(21): Show ATGGATGGATGGATGGATGGATGGATAAG	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG03098.hp1 HG03225.hp2 others(1): Show HG02976.hp2 HG03098.hp1 HG03225.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0022 a0001c0003t0020 a0001c0001t0002 a0001c0001t0022 a0001c0003t0020	a0001c0001t0002g0293 a0001c0001t0022g0292 a0001c0003t0020g0007 others(1): Show a0001c0001t0002g0293 a0001c0001t0022g0292 a0001c0003t0020g0007 a0001c0003t0020g0291	4	304	0.0132	28	c.-31 others(47): Show c.-31+37206_-31+37207insATGGATGGATAAGTGGATGGATGGAT GG	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRG_chr3_61556571_62302609	61672804	A A	AGAGAGAG others(21): Show AGAGAGAGGGAGAGAGGGGGAGAGAGAGG	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19240.hp1 HG02145.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0090 a0001c0001t0006g0036 a0001c0001t0001g0090 a0001c0001t0006g0036	2	94	0.0213	28	c.86- others(45): Show c.86-76059_86-76058insGGGGAGAGAGAGGGAGAGAGGGAGAGAG	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61676471	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0002 a0005c0011t0002	a0005c0011t0002g0080 a0005c0011t0002g0080	1	94	0.0106	28	c.86- others(45): Show c.86-72404_86-72403insAAAAAAAAAAAAAAAAAAAAAAAAGAAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61921117	C C	CTCCTTCC others(21): Show CTCCTTCCTTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG02258.hp2 HG01169.hp2 HG02258.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0001 a0006c0007t0004 a0001c0001t0001 a0006c0007t0004	a0001c0001t0001g0009 a0006c0007t0004g0060 a0001c0001t0001g0009 a0006c0007t0004g0060	2	94	0.0213	28	c.191 others(47): Show c.191-68489_191-68462dupCTTCCTTCCTTCCTTCCTTCCTTCCT TC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61926581	T T	TTCCCTCC others(21): Show TTCCCTCCCTCCCTCCCTCCCTCCCTCCC	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA18522.hp1 HG02809.hp2 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0002 a0001c0001t0001 a0002c0003t0002	a0001c0001t0001g0066 a0002c0003t0002g0061 a0001c0001t0001g0066 a0002c0003t0002g0061	2	94	0.0213	28	c.191 others(47): Show c.191-63040_191-63013dupCTCCCTCCCTCCCTCCCTCCCTCCCT CC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61926609	C C	CTCCCTCC others(21): Show CTCCCTCCCTCCCTCCCTCCCTCCCTCCT	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	94	0.0106	28	c.191 others(47): Show c.191-63013_191-63012insCTCCCTCCCTCCCTCCCTCCCTCCTT CC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61926609	C C	CTCCCTCC others(21): Show CTCCCTCCCTCCCTCCCTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0017 a0002c0003t0001g0017	1	94	0.0106	28	c.191 others(47): Show c.191-63013_191-63012insCTCCCTCCCTCCCTCCTTCCTTCCTT CC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TACACACA others(21): Show TACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02145.hp2 HG02109.hp1 HG02145.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0017 a0001c0001 a0007c0017	a0001c0001t0003 a0007c0017t0002 a0001c0001t0003 a0007c0017t0002	a0001c0001t0003g0012 a0007c0017t0002g0013 a0001c0001t0003g0012 a0007c0017t0002g0013	2	94	0.0213	28	c.265 others(47): Show c.2657-1511_2657-1484dupACACACACACACACACACACACACAC AC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29		INFO_REALIGN_3_PRIME	chr3	TogoVar

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