view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TRPC1_chr3_142719034_142812888 | 142763981 | T | TATATATA others(21): Show |
intron_variant | MODIFIER | HG02257.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0117 | 1 | 324 | 0.0031 | 28 | c.633 others(47): Show |
TRPC1 | ENSG00000144935.17 | transcript | ENST00000476941.6 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRPC1_chr3_142719034_142812888 | 142763983 | T | TATATATA others(21): Show |
intron_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0126 | 1 | 315 | 0.0032 | 28 | c.633 others(47): Show |
TRPC1 | ENSG00000144935.17 | transcript | ENST00000476941.6 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRPC4AP_chr20_34997404_35097807 | 35086529 | G | GTGTGTAT others(21): Show |
intron_variant | MODIFIER | HG00544.hp1 HG01106.hp1 HG01884.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0010 a0001c0001t0002g0163 a0001c0001t0002g0164 others(5): Show |
8 | 327 | 0.0245 | 28 | c.168 others(45): Show |
TRPC4AP | ENSG00000100991.12 | transcript | ENST00000252015.3 | protein_coding | 1/18 | chr20 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37650612 | T | TACACACA others(21): Show |
intron_variant | MODIFIER | HG02615.hp1 HG02717.hp1 HG02895.hp1 others(1): Show |
a0001 | a0001c0003 | a0001c0003t0015a0001c0003t0019a0001c0003t0027 | a0001c0003t0015g0125 a0001c0003t0015g0126 a0001c0003t0019g0253 others(1): Show |
4 | 19 | 0.2105 | 28 | c.207 others(45): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 8/10 | chr13 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37698167 | C | CTTTTTTT others(21): Show |
intron_variant | MODIFIER | HG03139.hp1 NA18988.hp1 NA19078.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0034a0001c0002t0003 | a0001c0001t0003g0225 a0001c0001t0034g0204 a0001c0002t0003g0279 |
3 | 8 | 0.3750 | 28 | c.898 others(45): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 3/10 | chr13 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37745457 | T | TACGCATA others(21): Show |
intron_variant | MODIFIER | NA18981.hp1 | a0001 | a0001c0002 | a0001c0002t0007 | a0001c0002t0007g0259 | 1 | 273 | 0.0037 | 28 | c.897 others(43): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 3/10 | chr13 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37745504 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0001 | a0001c0001t0028 | a0001c0001t0028g0002 | 1 | 284 | 0.0035 | 28 | c.897 others(43): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 3/10 | chr13 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37752075 | C | CTATATAT others(21): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01496.hp1 HG01981.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0100 a0001c0001t0002g0190 a0001c0001t0004g0255 others(1): Show |
4 | 25 | 0.1600 | 28 | c.379 others(45): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 2/10 | chr13 | TogoVar | |||||||
TRPC4_chr13_37627063_37874772 | 37812176 | C | CAAAAAAA others(21): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01516.hp2 HG02135.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(3): Show | a0001c0001t0001g0045 a0001c0001t0006g0034 a0001c0001t0007g0024 others(4): Show |
7 | 39 | 0.1795 | 28 | c.-27 others(47): Show |
TRPC4 | ENSG00000133107.15 | transcript | ENST00000379705.8 | protein_coding | 1/10 | chr13 | TogoVar | |||||||
TRPC6_chr11_101446564_101589007 | 101499651 | A | ACACAATA others(21): Show |
intron_variant | MODIFIER | HG01169.hp1 HG01257.hp2 HG01258.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006 | a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0003g0195 others(1): Show |
4 | 250 | 0.0160 | 28 | c.945 others(45): Show |
TRPC6 | ENSG00000137672.13 | transcript | ENST00000344327.8 | protein_coding | 2/12 | chr11 | TogoVar | |||||||
TRPC6_chr11_101446564_101589007 | 101499765 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | NA19056.hp1 | a0002 | a0002c0022 | a0002c0022t0001 | a0002c0022t0001g0155 | 1 | 244 | 0.0041 | 28 | c.945 others(45): Show |
TRPC6 | ENSG00000137672.13 | transcript | ENST00000344327.8 | protein_coding | 2/12 | chr11 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 70831967 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0002 | a0001c0002t0020 | a0001c0002t0020g0149 | 1 | 184 | 0.0054 | 28 | c.802 others(45): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 5/25 | chr9 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 70969756 | T | TTATATAT others(21): Show |
intron_variant | MODIFIER | NA18948.hp1 | a0001 | a0001c0002 | a0001c0002t0014 | a0001c0002t0014g0040 | 1 | 85 | 0.0118 | 28 | c.178 others(49): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 1/25 | chr9 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 70980067 | G | GCACACAC others(21): Show |
intron_variant | MODIFIER | HG01496.hp2 HG02622.hp2 HG02717.hp2 |
a0001a0003 | a0001c0002a0003c0034 | a0001c0002t0002a0001c0002t0020a0003c0034t0053 | a0001c0002t0002g0092 a0001c0002t0020g0152 a0003c0034t0053g0154 |
3 | 13 | 0.2308 | 28 | c.178 others(49): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 1/25 | chr9 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 71032139 | G | GATTATAT others(21): Show |
intron_variant | MODIFIER | HG00738.hp2 HG01496.hp2 HG02257.hp1 others(8): Show |
a0001a0003a0004 | a0001c0002a0001c0004a0001c0006others(3): Show | a0001c0002t0002a0001c0002t0020a0001c0004t0002others(4): Show | a0001c0002t0002g0151 a0001c0002t0002g0160 a0001c0002t0002g0162 others(8): Show |
11 | 201 | 0.0547 | 28 | c.177 others(47): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 1/25 | chr9 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 71096588 | A | ACTCTCTC others(21): Show |
intron_variant | MODIFIER | HG02976.hp2 | a0003 | a0003c0015 | a0003c0015t0018 | a0003c0015t0018g0111 | 1 | 203 | 0.0049 | 28 | c.177 others(47): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 1/25 | chr9 | TogoVar | |||||||
TRPM3_chr9_70524060_71126621 | 71096590 | A | ACACACAC others(21): Show |
intron_variant | MODIFIER | HG02717.hp1 HG03195.hp2 |
a0005 | a0005c0014 | a0005c0014t0013 | a0005c0014t0013g0004 a0005c0014t0013g0005 |
2 | 106 | 0.0189 | 28 | c.177 others(47): Show |
TRPM3 | ENSG00000083067.26 | transcript | ENST00000677713.2 | protein_coding | 1/25 | chr9 | TogoVar | |||||||
TRPM4_chr19_49152792_49216836 | 49175067 | C | CTTTTTTT others(21): Show |
intron_variant | MODIFIER | NA19010.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0098 | 1 | 181 | 0.0055 | 28 | c.115 others(47): Show |
TRPM4 | ENSG00000130529.16 | transcript | ENST00000252826.10 | protein_coding | 9/24 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TRPM4_chr19_49152792_49216836 | 49182095 | T | TCCATCCA others(21): Show |
intron_variant | MODIFIER | HG03098.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0040 | 1 | 310 | 0.0032 | 28 | c.126 others(45): Show |
TRPM4 | ENSG00000130529.16 | transcript | ENST00000252826.10 | protein_coding | 10/24 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TRPM4_chr19_49152792_49216836 | 49182099 | T | TCCATCCA others(21): Show |
intron_variant | MODIFIER | HG00140.hp1 HG03017.hp1 HG03704.hp1 |
a0001a0005 | a0001c0001a0005c0015 | a0001c0001t0002a0005c0015t0002 | a0001c0001t0002g0059 a0005c0015t0002g0058 a0005c0015t0002g0082 |
3 | 235 | 0.0128 | 28 | c.126 others(45): Show |
TRPM4 | ENSG00000130529.16 | transcript | ENST00000252826.10 | protein_coding | 10/24 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
TRPM6_chr9_74717495_74892921 | 74839892 | A | AGGAAGGA others(21): Show |
intron_variant | MODIFIER | HG02559.hp2 HG02970.hp2 |
a0001a0002 | a0001c0016a0002c0034 | a0001c0016t0001a0002c0034t0001 | a0001c0016t0001g0097 a0002c0034t0001g0121 |
2 | 77 | 0.0260 | 28 | c.544 others(43): Show |
TRPM6 | ENSG00000119121.22 | transcript | ENST00000360774.6 | protein_coding | 5/38 | chr9 | TogoVar | |||||||
TRPM6_chr9_74717495_74892921 | 74839892 | A | AGGAAGGA others(21): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG01106.hp2 others(22): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0006others(9): Show | a0001c0001t0001a0001c0001t0005a0001c0002t0001others(11): Show | a0001c0001t0001g0263 a0001c0001t0005g0250 a0001c0002t0001g0232 others(22): Show |
25 | 100 | 0.2500 | 28 | c.544 others(43): Show |
TRPM6 | ENSG00000119121.22 | transcript | ENST00000360774.6 | protein_coding | 5/38 | chr9 | TogoVar | |||||||
TRPM6_chr9_74717495_74892921 | 74839892 | A | AGGAAGGA others(21): Show |
intron_variant | MODIFIER | HG01071.hp2 HG01515.hp2 HG01517.hp1 others(10): Show |
a0001a0004a0010others(1): Show | a0001c0001a0001c0006a0004c0008others(2): Show | a0001c0001t0001a0001c0006t0001a0004c0008t0003others(2): Show | a0001c0001t0001g0261 a0001c0006t0001g0197 a0001c0006t0001g0198 others(10): Show |
13 | 88 | 0.1477 | 28 | c.544 others(43): Show |
TRPM6 | ENSG00000119121.22 | transcript | ENST00000360774.6 | protein_coding | 5/38 | chr9 | TogoVar | |||||||
TRPM6_chr9_74717495_74892921 | 74888393 | C | CTCTTTCT others(21): Show |
upstream_gene_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0106 | 1 | 93 | 0.0108 | 28 | c.-53 others(37): Show |
TRPM6 | ENSG00000119121.22 | transcript | ENST00000360774.6 | protein_coding | 473 | chr9 | TogoVar | |||||||
TRPM8_chr2_233912373_234024522 | 233927908 | T | TTCTTTCT others(21): Show |
intron_variant | MODIFIER | HG01255.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0226 | 1 | 267 | 0.0037 | 28 | c.117 others(45): Show |
TRPM8 | ENSG00000144481.17 | transcript | ENST00000324695.9 | protein_coding | 2/25 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TRPM8_chr2_233912373_234024522 | 233927908 | T | TTCTTTCT others(21): Show |
intron_variant | MODIFIER | HG01496.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0283 | 1 | 267 | 0.0037 | 28 | c.117 others(45): Show |
TRPM8 | ENSG00000144481.17 | transcript | ENST00000324695.9 | protein_coding | 2/25 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TRPS1_chr8_115403496_115673975 | 115408370 | G | GTATATAT others(21): Show |
downstream_gene_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0013 | 1 | 21 | 0.0476 | 28 | c.*56 others(39): Show |
TRPS1 | ENSG00000104447.13 | transcript | ENST00000395715.8 | protein_coding | 125 | chr8 | TogoVar | |||||||
TRPV1_chr17_3560446_3614411 | 3576668 | A | AAAAAAAA others(21): Show |
intron_variant | MODIFIER | HG00733.hp2 | a0005 | a0005c0011 | a0005c0011t0011 | a0005c0011t0011g0193 | 1 | 59 | 0.0169 | 28 | c.178 others(45): Show |
TRPV1 | ENSG00000196689.13 | transcript | ENST00000572705.2 | protein_coding | 13/16 | chr17 | TogoVar | |||||||
TRPV3_chr17_3505502_3562812 | 3519436 | G | GGATGGAT others(21): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00544.hp2 HG00597.hp1 others(37): Show |
a0001a0002a0005others(3): Show | a0001c0002a0001c0005a0001c0008others(9): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0009others(17): Show | a0001c0002t0001g0107 a0001c0002t0001g0178 a0001c0002t0001g0321 others(37): Show |
40 | 319 | 0.1254 | 28 | c.181 others(45): Show |
TRPV3 | ENSG00000167723.15 | transcript | ENST00000576742.6 | protein_coding | 14/17 | chr17 | TogoVar | |||||||
TRPV5_chr7_142903101_142938746 | 142924341 | T | TATATATA others(21): Show |
intron_variant | MODIFIER | HG01106.hp1 HG01256.hp2 HG02055.hp1 others(20): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0002 | a0002c0002t0001g0049 a0002c0002t0001g0058 a0002c0002t0001g0068 others(15): Show |
23 | 240 | 0.0958 | 28 | c.112 others(47): Show |
TRPV5 | ENSG00000127412.7 | transcript | ENST00000265310.6 | protein_coding | 8/14 | chr7 | TogoVar | |||||||
TRPV6_chr7_142866208_142890745 | 142890440 | A | ACACACAC others(21): Show |
upstream_gene_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0003 | 1 | 25 | 0.0400 | 28 | c.-48 others(39): Show |
TRPV6 | ENSG00000165125.22 | transcript | ENST00000359396.9 | protein_coding | 4696 | WARNING_TRANSCRIPT_NO_START_CODON | chr7 | TogoVar | ||||||
TRPV6_chr7_142866208_142890745 | 142890442 | A | ACACACAC others(21): Show |
upstream_gene_variant | MODIFIER | HG01884.hp1 HG02886.hp1 HG02922.hp2 others(3): Show |
a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0006 a0001c0005t0001g0051 |
6 | 264 | 0.0227 | 28 | c.-48 others(39): Show |
TRPV6 | ENSG00000165125.22 | transcript | ENST00000359396.9 | protein_coding | 4698 | WARNING_TRANSCRIPT_NO_START_CODON | chr7 | TogoVar | ||||||
TSBP1_chr6_32287698_32376903 | 32310761 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | HG03490.hp1 HG03492.hp1 HG03831.hp1 |
a0009 | a0009c0009 | a0009c0009t0003 | a0009c0009t0003g0321 a0009c0009t0003g0322 a0009c0009t0003g0323 |
3 | 325 | 0.0092 | 28 | c.574 others(45): Show |
TSBP1 | ENSG00000204296.13 | transcript | ENST00000533191.6 | protein_coding | 22/25 | chr6 | TogoVar | |||||||
TSBP1_chr6_32287698_32376903 | 32360233 | C | CTTTTTTT others(21): Show |
intron_variant | MODIFIER | HG01192.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0106 | 1 | 420 | 0.0024 | 28 | c.218 others(45): Show |
TSBP1 | ENSG00000204296.13 | transcript | ENST00000533191.6 | protein_coding | 6/25 | chr6 | TogoVar | |||||||
TSBP1_chr6_32287698_32376903 | 32367243 | A | AAGAGAGA others(21): Show |
intron_variant | MODIFIER | HG03492.hp1 | a0009 | a0009c0009 | a0009c0009t0003 | a0009c0009t0003g0321 | 1 | 50 | 0.0200 | 28 | c.166 others(43): Show |
TSBP1 | ENSG00000204296.13 | transcript | ENST00000533191.6 | protein_coding | 4/25 | chr6 | TogoVar | |||||||
TSC1_chr9_132886349_132949616 | 132908901 | C | CTTTTTTT others(21): Show |
intron_variant | MODIFIER | HG02895.hp2 HG03209.hp1 NA18994.hp2 |
a0002a0005 | a0002c0002a0005c0010 | a0002c0002t0003a0002c0002t0058a0005c0010t0043 | a0002c0002t0003g0254 a0002c0002t0058g0259 a0005c0010t0043g0224 |
3 | 282 | 0.0106 | 28 | c.126 others(47): Show |
TSC1 | ENSG00000165699.15 | transcript | ENST00000298552.9 | protein_coding | 12/22 | chr9 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54188015 | C | CAAAAAGA others(21): Show |
upstream_gene_variant | MODIFIER | HG02040.hp1 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0006 | 1 | 256 | 0.0039 | 28 | c.-33 others(39): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 3292 | chr19 | TogoVar | |||||||
TSEN34_chr19_54186308_54199532 | 54188015 | C | CAGAAAGA others(21): Show |
upstream_gene_variant | MODIFIER | HG02895.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0010 | 1 | 256 | 0.0039 | 28 | c.-33 others(39): Show |
TSEN34 | ENSG00000170892.13 | transcript | ENST00000396388.3 | protein_coding | 3292 | chr19 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18499381 | A | AATATATA others(21): Show |
intron_variant | MODIFIER | HG02451.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0370 | 1 | 379 | 0.0026 | 28 | c.640 others(45): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18499402 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | HG03098.hp1 NA18747.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0256 a0001c0001t0001g0388 |
2 | 28 | 0.0714 | 28 | c.640 others(45): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18499402 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | NA19079.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0032 a0001c0001t0001g0381 |
2 | 28 | 0.0714 | 28 | c.640 others(45): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18499402 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | NA19060.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0285 | 1 | 27 | 0.0370 | 28 | c.640 others(45): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSG101_chr11_18475311_18531942 | 18499402 | A | ATATATAT others(21): Show |
intron_variant | MODIFIER | NA18955.hp2 NA18973.hp2 NA19078.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0258 a0001c0001t0001g0270 a0001c0001t0001g0286 |
3 | 29 | 0.1034 | 28 | c.640 others(45): Show |
TSG101 | ENSG00000074319.13 | transcript | ENST00000251968.4 | protein_coding | 7/9 | chr11 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130690375 | T | TTTCTTTC others(21): Show |
upstream_gene_variant | MODIFIER | HG01106.hp1 HG01261.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0003 a0001c0001t0002g0071 |
2 | 380 | 0.0053 | 28 | c.-42 others(39): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 3831 | chr7 | TogoVar | |||||||
TSGA13_chr7_130663643_130691545 | 130690379 | T | TTTCTTTC others(21): Show |
upstream_gene_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 | 1 | 373 | 0.0027 | 28 | c.-42 others(39): Show |
TSGA13 | ENSG00000213265.9 | transcript | ENST00000356588.8 | protein_coding | 3835 | chr7 | TogoVar | |||||||
TSHB_chr1_115024826_115039302 | 115026279 | G | GTTTTTTT others(21): Show |
upstream_gene_variant | MODIFIER | NA18972.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 23 | 0.0435 | 28 | c.-35 others(39): Show |
TSHB | ENSG00000134200.4 | transcript | ENST00000256592.3 | protein_coding | 3546 | chr1 | TogoVar | |||||||
TSHR_chr14_80950621_81151306 | 80973403 | C | CAAAAAAA others(21): Show |
intron_variant | MODIFIER | HG01981.hp1 HG02109.hp2 NA18982.hp2 |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0014a0002c0003t0003 | a0001c0001t0001g0239 a0001c0002t0014g0169 a0002c0003t0003g0111 |
3 | 28 | 0.1071 | 28 | c.170 others(47): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81067483 | T | TTATATAT others(21): Show |
intron_variant | MODIFIER | HG03688.hp1 | a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0064 | 1 | 10 | 0.1000 | 28 | c.243 others(43): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHR_chr14_80950621_81151306 | 81067927 | C | CTATATAT others(21): Show |
intron_variant | MODIFIER | HG01891.hp1 HG01981.hp1 HG02809.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0014a0001c0001t0020others(5): Show | a0001c0001t0001g0104 a0001c0001t0014g0003 a0001c0001t0020g0173 others(6): Show |
9 | 50 | 0.1800 | 28 | c.243 others(43): Show |
TSHR | ENSG00000165409.18 | transcript | ENST00000298171.7 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
TSHZ1_chr18_75205797_75294944 | 75246403 | G | GGTGTGTG others(21): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01433.hp2 HG02257.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0005others(2): Show | a0001c0001t0002a0001c0001t0009a0001c0004t0001others(3): Show | a0001c0001t0002g0020 a0001c0001t0002g0173 a0001c0001t0002g0195 others(6): Show |
9 | 16 | 0.5625 | 28 | c.40+ others(45): Show |
TSHZ1 | ENSG00000179981.11 | transcript | ENST00000580243.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr18 | TogoVar |