view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC9A3_chr5_465456_529449 | 507670 | A | ACAGACGC others(292): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00558.hp2 HG01361.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0009a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(5): Show | a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0072 others(14): Show |
17 | 128 | 0.1328 | 299 | c.212 others(318): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | |||||||
SLC9A3_chr5_465456_529449 | 507785 | A | ACAGACGC others(292): Show |
intron_variant | MODIFIER | HG01934.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0109 | 1 | 177 | 0.0056 | 299 | c.212 others(318): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168595194 | C | CTGGCATC others(292): Show |
intron_variant | MODIFIER | HG00609.hp2 HG01069.hp1 HG01256.hp2 others(23): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(2): Show | a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0089 others(23): Show |
26 | 135 | 0.1926 | 299 | c.638 others(316): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | chr6 | TogoVar | |||||||
SNRNP70_chr19_49080451_49113604 | 49092919 | T | TTTGTTTT others(292): Show |
intron_variant | MODIFIER | HG01943.hp1 NA19000.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0176 a0001c0001t0002g0223 |
2 | 317 | 0.0063 | 299 | c.265 others(316): Show |
SNRNP70 | ENSG00000104852.15 | transcript | ENST00000598441.6 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1221694 | T | TCTCTAGC others(292): Show |
intron_variant | MODIFIER | HG02965.hp1 HG03486.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0069 a0001c0002t0001g0141 |
2 | 115 | 0.0174 | 299 | c.719 others(318): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | chr2 | TogoVar | |||||||
SPATA13_chr13_24155720_24312069 | 24190088 | T | TAATGATA others(292): Show |
intron_variant | MODIFIER | NA18971.hp1 | a0001 | a0001c0006 | a0001c0006t0010 | a0001c0006t0010g0240 | 1 | 351 | 0.0028 | 299 | c.-11 others(320): Show |
SPATA13 | ENSG00000182957.16 | transcript | ENST00000382108.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
STOML3_chr13_38960925_38995831 | 38988474 | A | ATATATTA others(292): Show |
intron_variant | MODIFIER | HG00738.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0316 | 1 | 324 | 0.0031 | 299 | c.52+ others(314): Show |
STOML3 | ENSG00000133115.12 | transcript | ENST00000379631.9 | protein_coding | 1/6 | chr13 | TogoVar | |||||||
SUFU_chr10_102498972_102638535 | 102637258 | A | ATATATAT others(292): Show |
downstream_gene_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0081 | 1 | 244 | 0.0041 | 299 | c.*71 others(310): Show |
SUFU | ENSG00000107882.12 | transcript | ENST00000369902.8 | protein_coding | 3724 | chr10 | TogoVar | |||||||
SUZ12_chr17_31932007_32006038 | 31957709 | C | CCAGTTTT others(292): Show |
intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0016 | 1 | 273 | 0.0037 | 299 | c.456 others(316): Show |
SUZ12 | ENSG00000178691.11 | transcript | ENST00000322652.10 | protein_coding | 4/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SYK_chr9_90796819_90903549 | 90884884 | T | TATATACA others(292): Show |
intron_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0185 | 1 | 30 | 0.0333 | 299 | c.158 others(318): Show |
SYK | ENSG00000165025.15 | transcript | ENST00000375754.9 | protein_coding | 11/13 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TBC1D32_chr6_121074494_121339480 | 121160497 | C | CAAGAAGG others(292): Show |
intron_variant | MODIFIER | HG00735.hp2 HG01361.hp2 NA18962.hp1 |
a0003 | a0003c0004 | a0003c0004t0003a0003c0004t0011 | a0003c0004t0003g0028 a0003c0004t0003g0041 a0003c0004t0011g0035 |
3 | 249 | 0.0120 | 299 | c.268 others(316): Show |
TBC1D32 | ENSG00000146350.14 | transcript | ENST00000398212.7 | protein_coding | 23/31 | chr6 | TogoVar | |||||||
TBCE_chr1_235362427_235457443 | 235412163 | T | TCCCCCTC others(292): Show |
intron_variant | MODIFIER | HG03669.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 | 1 | 101 | 0.0099 | 299 | c.186 others(316): Show |
TBCE | ENSG00000284770.2 | transcript | ENST00000642610.2 | protein_coding | 3/16 | chr1 | TogoVar | |||||||
TBCE_chr1_235362427_235457443 | 235412163 | T | TCCCCCTC others(292): Show |
intron_variant | MODIFIER | HG02738.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0125 | 1 | 101 | 0.0099 | 299 | c.186 others(316): Show |
TBCE | ENSG00000284770.2 | transcript | ENST00000642610.2 | protein_coding | 3/16 | chr1 | TogoVar | |||||||
TCF3_chr19_1604292_1657615 | 1628564 | G | GGGGTGAG others(292): Show |
intron_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0325 | 1 | 334 | 0.0030 | 299 | c.299 others(316): Show |
TCF3 | ENSG00000071564.19 | transcript | ENST00000262965.12 | protein_coding | 5/18 | chr19 | TogoVar | |||||||
TERT_chr5_1248167_1300068 | 1272985 | C | CGCCATCC others(292): Show |
intron_variant | MODIFIER | HG02523.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0162 | 1 | 82 | 0.0122 | 299 | c.228 others(316): Show |
TERT | ENSG00000164362.21 | transcript | ENST00000310581.10 | protein_coding | 6/15 | chr5 | TogoVar | |||||||
TH_chr11_2158929_2176815 | 2161578 | A | AGACCCCT others(292): Show |
downstream_gene_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0011 | a0001c0011t0001 | a0001c0011t0001g0063 | 1 | 206 | 0.0049 | 299 | c.*26 others(310): Show |
TH | ENSG00000180176.15 | transcript | ENST00000352909.8 | protein_coding | 2350 | chr11 | TogoVar | |||||||
TMPRSS2_chr21_41459305_41513158 | 41474830 | A | AGGGAGTG others(292): Show |
intron_variant | MODIFIER | NA19085.hp1 | a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0120 | 1 | 241 | 0.0041 | 299 | c.728 others(316): Show |
TMPRSS2 | ENSG00000184012.14 | transcript | ENST00000332149.10 | protein_coding | 8/13 | chr21 | TogoVar | |||||||
TNNT1_chr19_55127698_55154206 | 55134768 | A | AGGAGAAG others(292): Show |
intron_variant | MODIFIER | NA18960.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0105 | 1 | 214 | 0.0047 | 299 | c.612 others(314): Show |
TNNT1 | ENSG00000105048.18 | transcript | ENST00000588981.6 | protein_coding | 11/13 | chr19 | TogoVar | |||||||
TNPO3_chr7_128949185_129060111 | 129059138 | T | TATTTTTA others(292): Show |
upstream_gene_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0181 | 1 | 333 | 0.0030 | 299 | c.-43 others(310): Show |
TNPO3 | ENSG00000064419.14 | transcript | ENST00000265388.10 | protein_coding | 4028 | chr7 | TogoVar | |||||||
TPPP_chr5_654862_698352 | 682358 | T | TACTAGGG others(292): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(211): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(52): Show | a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0017 others(185): Show |
214 | 329 | 0.6505 | 299 | c.-4- others(314): Show |
TPPP | ENSG00000171368.12 | transcript | ENST00000360578.7 | protein_coding | 1/3 | chr5 | TogoVar | |||||||
TPPP_chr5_654862_698352 | 682358 | T | TACTAGGG others(292): Show |
intron_variant | MODIFIER | HG01099.hp2 HG01978.hp1 HG02273.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0004t0001 | a0001c0001t0003g0356 a0001c0001t0003g0361 a0001c0004t0001g0139 |
3 | 118 | 0.0254 | 299 | c.-4- others(314): Show |
TPPP | ENSG00000171368.12 | transcript | ENST00000360578.7 | protein_coding | 1/3 | chr5 | TogoVar | |||||||
TRAPPC12_chr2_3374694_3484565 | 3439546 | G | GTTGTTGA others(292): Show |
intron_variant | MODIFIER | NA18998.hp1 | a0002 | a0002c0010 | a0002c0010t0002 | a0002c0010t0002g0041 | 1 | 334 | 0.0030 | 299 | c.141 others(318): Show |
TRAPPC12 | ENSG00000171853.16 | transcript | ENST00000324266.10 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
TSGA10_chr2_98992261_99159942 | 99121450 | T | TGAAGTAT others(292): Show |
intron_variant | MODIFIER | HG02818.hp2 HG02896.hp2 HG03471.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(1): Show |
4 | 194 | 0.0206 | 299 | c.-49 others(318): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 2/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99121450 | T | TGAAGTAT others(292): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00544.hp1 others(124): Show |
a0001a0004a0005others(1): Show | a0001c0001a0004c0008a0005c0003others(1): Show | a0001c0001t0001a0001c0001t0010a0001c0001t0011others(4): Show | a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 others(124): Show |
127 | 317 | 0.4006 | 299 | c.-49 others(318): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 2/20 | chr2 | TogoVar | |||||||
TSGA10_chr2_98992261_99159942 | 99121450 | T | TGAAGTAT others(292): Show |
intron_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0239 | 1 | 191 | 0.0052 | 299 | c.-49 others(318): Show |
TSGA10 | ENSG00000135951.16 | transcript | ENST00000393483.8 | protein_coding | 2/20 | chr2 | TogoVar | |||||||
TSNARE1_chr8_142207080_142408182 | 142390833 | A | ACAGACGC others(292): Show |
intron_variant | MODIFIER | HG02622.hp1 HG02896.hp1 |
a0006 | a0006c0006 | a0006c0006t0001a0006c0006t0002 | a0006c0006t0001g0236 a0006c0006t0002g0237 |
2 | 222 | 0.0090 | 299 | c.-40 others(318): Show |
TSNARE1 | ENSG00000171045.16 | transcript | ENST00000524325.6 | protein_coding | 1/13 | chr8 | TogoVar | |||||||
TSPAN9_chr12_3072379_3291559 | 3198707 | G | GTCACACC others(292): Show |
intron_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0001 | a0001c0001t0038 | a0001c0001t0038g0287 | 1 | 280 | 0.0036 | 299 | c.-17 others(316): Show |
TSPAN9 | ENSG00000011105.14 | transcript | ENST00000011898.10 | protein_coding | 2/8 | chr12 | TogoVar | |||||||
ULK1_chr12_131889622_131928150 | 131917104 | C | CGGGTTCG others(292): Show |
intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0306 | 1 | 312 | 0.0032 | 299 | c.218 others(314): Show |
ULK1 | ENSG00000177169.10 | transcript | ENST00000321867.6 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
ULK1_chr12_131889622_131928150 | 131917104 | C | CGGGTTCG others(292): Show |
intron_variant | MODIFIER | NA18963.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0104 | 1 | 312 | 0.0032 | 299 | c.218 others(314): Show |
ULK1 | ENSG00000177169.10 | transcript | ENST00000321867.6 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
ULK1_chr12_131889622_131928150 | 131917123 | G | GTCGGGTG others(292): Show |
intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0091 | 1 | 203 | 0.0049 | 299 | c.218 others(314): Show |
ULK1 | ENSG00000177169.10 | transcript | ENST00000321867.6 | protein_coding | 21/27 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
VCX_chrX_7838171_7849143 | 7844176 | A | AGGGAGGG others(292): Show |
downstream_gene_variant | MODIFIER | NA18967.hp1 | a0007 | a0007c0008 | a0007c0008t0003 | a0007c0008t0003g0002 | 1 | 305 | 0.0033 | 299 | c.*16 others(308): Show |
VCX | ENSG00000182583.13 | transcript | ENST00000688183.1 | protein_coding | 34 | chrX | TogoVar | |||||||
VCX_chrX_7838171_7849143 | 7844472 | G | GGGAGGAA others(292): Show |
downstream_gene_variant | MODIFIER | NA19076.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0001 | 1 | 295 | 0.0034 | 299 | c.*45 others(308): Show |
VCX | ENSG00000182583.13 | transcript | ENST00000688183.1 | protein_coding | 330 | chrX | TogoVar | |||||||
VGLL4_chr3_11551069_11648915 | 11604262 | A | ATGAATTC others(292): Show |
intron_variant | MODIFIER | HG02683.hp2 | a0001 | a0001c0002 | a0001c0002t0033 | a0001c0002t0033g0222 | 1 | 285 | 0.0035 | 299 | c.83- others(314): Show |
VGLL4 | ENSG00000144560.16 | transcript | ENST00000430365.7 | protein_coding | 1/4 | chr3 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 510333 | T | TCGCCCCT others(292): Show |
3_prime_UTR_variant | MODIFIER | HG01255.hp2 | a0001 | a0001c0001 | a0001c0001t0104 | a0001c0001t0104g0212 | 1 | 82 | 0.0122 | 299 | c.*87 others(310): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 22/22 | 8794 | chr17 | TogoVar | ||||||
VPS53_chr17_503668_719839 | 510333 | T | TCGCCCCT others(292): Show |
3_prime_UTR_variant | MODIFIER | HG00741.hp2 HG01081.hp2 HG01175.hp2 others(29): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0002a0001c0001t0011a0001c0001t0017others(13): Show | a0001c0001t0002g0121 a0001c0001t0002g0128 a0001c0001t0002g0133 others(29): Show |
32 | 113 | 0.2832 | 299 | c.*87 others(310): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 22/22 | 8794 | chr17 | TogoVar | ||||||
ZBTB43_chr9_126800040_126843210 | 126814265 | G | GATTTTTA others(292): Show |
intron_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0138 | 1 | 78 | 0.0128 | 299 | c.-24 others(316): Show |
ZBTB43 | ENSG00000169155.10 | transcript | ENST00000373464.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
ZDHHC11B_chr5_705355_789729 | 749002 | A | ACTAAGTG others(292): Show |
intron_variant | MODIFIER | NA18955.hp2 | a0001 | a0001c0002 | a0001c0002t0036 | a0001c0002t0036g0012 | 1 | 170 | 0.0059 | 299 | c.629 others(314): Show |
ZDHHC11B | ENSG00000206077.14 | transcript | ENST00000508859.8 | protein_coding | 7/13 | chr5 | TogoVar | |||||||
ZNF778_chr16_89212703_89242141 | 89215276 | G | GAACATGA others(292): Show |
upstream_gene_variant | MODIFIER | HG02738.hp1 | a0006 | a0006c0007 | a0006c0007t0141 | a0006c0007t0141g0008 | 1 | 376 | 0.0027 | 299 | c.-27 others(310): Show |
ZNF778 | ENSG00000170100.14 | transcript | ENST00000433976.7 | protein_coding | 2426 | chr16 | TogoVar |