view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VRK1_chr14_96792382_96886609 | 96809571 | T | TTTC | intron_variant | MODIFIER | HG02145.hp2 HG02896.hp2 HG02897.hp1 others(4): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0086 a0001c0002t0001g0242 a0001c0002t0001g0243 others(4): Show |
7 | 276 | 0.0254 | 3 | c.-6+ others(20): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK1_chr14_96792382_96886609 | 96822402 | A | AGTT | intron_variant | MODIFIER | HG00140.hp2 HG00642.hp1 HG01168.hp1 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0008 a0001c0002t0001g0026 a0001c0002t0001g0027 others(5): Show |
9 | 276 | 0.0326 | 3 | c.-5- others(20): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK1_chr14_96792382_96886609 | 96839084 | G | GTTT | intron_variant | MODIFIER | HG00140.hp2 HG00642.hp1 HG01168.hp1 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0008 a0001c0002t0001g0026 a0001c0002t0001g0027 others(5): Show |
9 | 212 | 0.0425 | 3 | c.216 others(20): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK1_chr14_96792382_96886609 | 96879236 | T | TAAG | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00558.hp2 others(151): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0001 | a0001c0001t0001g0160 a0001c0001t0001g0203 a0001c0001t0001g0204 others(132): Show |
154 | 276 | 0.5580 | 3 | c.116 others(22): Show |
VRK1 | ENSG00000100749.9 | transcript | ENST00000216639.8 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58047749 | C | CAGG | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(81): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0017 a0001c0001t0001g0259 others(79): Show |
84 | 338 | 0.2485 | 3 | c.-6+ others(16): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58075863 | A | ACTT | intron_variant | MODIFIER | HG00423.hp2 HG00735.hp1 HG01243.hp2 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0052 others(22): Show |
25 | 338 | 0.0740 | 3 | c.137 others(20): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 2/12 | chr2 | TogoVar | |||||||
VRK2_chr2_58041806_58164871 | 58098610 | A | AGCC | intron_variant | MODIFIER | HG00099.hp1 HG01069.hp2 HG01071.hp1 others(21): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0061 others(18): Show |
24 | 338 | 0.0710 | 3 | c.543 others(20): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58112576 | G | GAAA | intron_variant | MODIFIER | HG01884.hp1 HG01884.hp2 HG02572.hp1 others(8): Show |
a0001a0002a0006 | a0001c0003a0002c0002a0006c0010 | a0001c0003t0001a0002c0002t0001a0006c0010t0001 | a0001c0003t0001g0261 a0001c0003t0001g0263 a0001c0003t0001g0267 others(8): Show |
11 | 225 | 0.0489 | 3 | c.544 others(22): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58114698 | A | AACC | intron_variant | MODIFIER | HG01891.hp1 HG02572.hp2 HG02647.hp1 others(7): Show |
a0001 | a0001c0003 | a0001c0003t0001a0001c0003t0004 | a0001c0003t0001g0009 a0001c0003t0001g0010 a0001c0003t0001g0012 others(7): Show |
10 | 338 | 0.0296 | 3 | c.544 others(20): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | chr2 | TogoVar | |||||||
VRK2_chr2_58041806_58164871 | 58134617 | C | CAAA | intron_variant | MODIFIER | HG01109.hp1 HG01952.hp2 HG02145.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0114 a0001c0001t0001g0119 a0001c0001t0001g0126 others(3): Show |
6 | 184 | 0.0326 | 3 | c.798 others(18): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58136909 | A | ATAT | intron_variant | MODIFIER | HG01167.hp1 HG02258.hp2 HG02280.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017 a0001c0001t0001g0142 a0001c0001t0001g0143 others(12): Show |
15 | 338 | 0.0444 | 3 | c.856 others(20): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58151731 | G | GTTT | intron_variant | MODIFIER | HG00741.hp1 HG01433.hp1 HG02132.hp2 others(9): Show |
a0001a0004 | a0001c0001a0004c0007 | a0001c0001t0001a0001c0001t0002a0004c0007t0002 | a0001c0001t0001g0259 a0001c0001t0001g0312 a0001c0001t0001g0313 others(9): Show |
12 | 37 | 0.3243 | 3 | c.118 others(22): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK3_chr19_49971468_50030372 | 49974871 | A | ACAC | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00609.hp2 HG00642.hp1 others(43): Show |
a0001a0005 | a0001c0001a0001c0011a0005c0012 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0002g0026 a0001c0001t0002g0031 a0001c0001t0002g0032 others(42): Show |
46 | 346 | 0.1329 | 3 | c.*19 others(14): Show |
VRK3 | ENSG00000105053.11 | transcript | ENST00000316763.8 | protein_coding | 1596 | chr19 | TogoVar | |||||||
VRK3_chr19_49971468_50030372 | 49974885 | A | ACCG | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00408.hp2 others(53): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0007 | a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0002g0010 others(45): Show |
56 | 346 | 0.1619 | 3 | c.*19 others(14): Show |
VRK3 | ENSG00000105053.11 | transcript | ENST00000316763.8 | protein_coding | 1582 | chr19 | TogoVar | |||||||
VRK3_chr19_49971468_50030372 | 49998948 | G | GAAA | intron_variant | MODIFIER | HG00438.hp2 HG00609.hp1 HG00738.hp1 others(59): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0006others(2): Show | a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 others(52): Show |
62 | 144 | 0.4306 | 3 | c.613 others(20): Show |
VRK3 | ENSG00000105053.11 | transcript | ENST00000316763.8 | protein_coding | 6/14 | chr19 | TogoVar | |||||||
VRK3_chr19_49971468_50030372 | 50016900 | G | GAGC | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00408.hp1 others(102): Show |
a0001a0005 | a0001c0001a0001c0011a0005c0012 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0083 a0001c0001t0002g0003 a0001c0001t0002g0009 others(93): Show |
105 | 348 | 0.3017 | 3 | c.-1- others(16): Show |
VRK3 | ENSG00000105053.11 | transcript | ENST00000316763.8 | protein_coding | 2/14 | chr19 | TogoVar | |||||||
VRK3_chr19_49971468_50030372 | 50019674 | C | CTTT | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00438.hp2 others(29): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 others(26): Show |
32 | 48 | 0.6667 | 3 | c.-2+ others(16): Show |
VRK3 | ENSG00000105053.11 | transcript | ENST00000316763.8 | protein_coding | 2/14 | chr19 | TogoVar | |||||||
VRTN_chr14_74343471_74365008 | 74344246 | C | CAAA | upstream_gene_variant | MODIFIER | HG01257.hp1 HG01358.hp1 HG01952.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0048 others(1): Show |
7 | 10 | 0.7000 | 3 | c.-44 others(14): Show |
VRTN | ENSG00000133980.5 | transcript | ENST00000256362.5 | protein_coding | 4224 | chr14 | TogoVar | |||||||
VRTN_chr14_74343471_74365008 | 74344407 | C | CAAA | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01192.hp2 HG02683.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0002 a0001c0001t0002g0001 a0001c0001t0002g0013 others(2): Show |
9 | 75 | 0.1200 | 3 | c.-42 others(14): Show |
VRTN | ENSG00000133980.5 | transcript | ENST00000256362.5 | protein_coding | 4063 | chr14 | TogoVar | |||||||
VRTN_chr14_74343471_74365008 | 74363490 | A | ATTT | downstream_gene_variant | MODIFIER | HG00280.hp2 HG01934.hp1 HG02572.hp1 others(10): Show |
a0001a0002a0007 | a0001c0001a0001c0003a0002c0007others(1): Show | a0001c0001t0001a0001c0001t0009a0001c0003t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0030 others(8): Show |
13 | 233 | 0.0558 | 3 | c.*45 others(14): Show |
VRTN | ENSG00000133980.5 | transcript | ENST00000256362.5 | protein_coding | 3483 | chr14 | TogoVar | |||||||
VSIG10L_chr19_51326541_51347139 | 51334846 | C | CAAG | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(343): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0003a0001c0012others(20): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(33): Show | a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0019 others(81): Show |
346 | 450 | 0.7689 | 3 | c.230 others(20): Show |
VSIG10L | ENSG00000186806.6 | transcript | ENST00000335624.5 | protein_coding | 7/9 | chr19 | TogoVar | |||||||
VSIG10L_chr19_51326541_51347139 | 51336763 | A | ATTT | intron_variant | MODIFIER | HG00423.hp2 HG01169.hp2 HG01175.hp1 others(44): Show |
a0001a0003a0009 | a0001c0001a0001c0003a0001c0028others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(4): Show | a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0002g0010 others(8): Show |
47 | 224 | 0.2098 | 3 | c.230 others(20): Show |
VSIG10L | ENSG00000186806.6 | transcript | ENST00000335624.5 | protein_coding | 7/9 | chr19 | TogoVar | |||||||
VSIG10_chr12_118058593_118109011 | 118066245 | C | CAAA | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00544.hp2 others(55): Show |
a0001a0003a0006others(2): Show | a0001c0002a0001c0033a0003c0005others(5): Show | a0001c0002t0002a0001c0002t0091a0001c0002t0092others(15): Show | a0001c0002t0002g0387 a0001c0002t0091g0386 a0001c0002t0092g0385 others(50): Show |
58 | 217 | 0.2673 | 3 | c.*39 others(12): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 9/9 | 393 | chr12 | TogoVar | ||||||
VSIG10_chr12_118058593_118109011 | 118068023 | C | CTTT | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG00673.hp2 others(56): Show |
a0001a0002a0003others(5): Show | a0001c0002a0001c0004a0001c0021others(11): Show | a0001c0002t0002a0001c0002t0009a0001c0002t0013others(32): Show | a0001c0002t0002g0387 a0001c0002t0009g0021 a0001c0002t0009g0329 others(53): Show |
59 | 291 | 0.2027 | 3 | c.156 others(20): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 8/8 | chr12 | TogoVar | |||||||
VSIG10_chr12_118058593_118109011 | 118068045 | T | TTTC | intron_variant | MODIFIER | HG00280.hp1 HG01433.hp1 HG02071.hp2 others(5): Show |
a0003 | a0003c0005a0003c0006a0003c0014 | a0003c0005t0002a0003c0005t0005a0003c0005t0015others(5): Show | a0003c0005t0002g0099 a0003c0005t0005g0316 a0003c0005t0015g0277 others(5): Show |
8 | 354 | 0.0226 | 3 | c.156 others(20): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 8/8 | chr12 | TogoVar | |||||||
VSIG10_chr12_118058593_118109011 | 118068522 | T | TTCC | disruptive_inframe_insertion | MODERATE | HG02257.hp1 HG03453.hp1 HG03471.hp2 |
a0007 | a0007c0017 | a0007c0017t0024a0007c0017t0081 | a0007c0017t0024g0108 a0007c0017t0024g0109 a0007c0017t0081g0110 |
3 | 261 | 0.0115 | 3 | c.141 others(12): Show |
p.Glu others(6): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 8/9 | 1761/5009 | 1421/1623 | 474/540 | chr12 | TogoVar | |||
VSIG10_chr12_118058593_118109011 | 118069422 | C | CTTT | intron_variant | MODIFIER | HG02738.hp1 NA18959.hp1 NA18985.hp1 |
a0001 | a0001c0002a0001c0004a0001c0021 | a0001c0002t0013a0001c0004t0013a0001c0021t0003 | a0001c0002t0013g0047 a0001c0004t0013g0254 a0001c0021t0003g0395 |
3 | 223 | 0.0135 | 3 | c.134 others(20): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 7/8 | chr12 | TogoVar | |||||||
VSIG10_chr12_118058593_118109011 | 118075766 | A | ACAG | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(67): Show |
a0001a0002a0003others(3): Show | a0001c0002a0001c0004a0001c0021others(6): Show | a0001c0002t0003a0001c0002t0013a0001c0002t0018others(27): Show | a0001c0002t0003g0033 a0001c0002t0003g0048 a0001c0002t0003g0060 others(67): Show |
70 | 410 | 0.1707 | 3 | c.926 others(20): Show |
VSIG10 | ENSG00000176834.14 | transcript | ENST00000359236.10 | protein_coding | 4/8 | chr12 | TogoVar | |||||||
VSIG4_chrX_66016738_66045080 | 66036946 | T | TATA | intron_variant | MODIFIER | HG03041.hp2 HG03195.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0148 a0001c0001t0001g0149 |
2 | 216 | 0.0093 | 3 | c.55+ others(18): Show |
VSIG4 | ENSG00000155659.15 | transcript | ENST00000374737.9 | protein_coding | 1/7 | chrX | TogoVar | |||||||
VSIG4_chrX_66016738_66045080 | 66037099 | A | ATAG | intron_variant | MODIFIER | HG02615.hp1 HG02976.hp2 HG03710.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0098 a0001c0001t0005g0035 a0001c0001t0005g0036 |
3 | 216 | 0.0139 | 3 | c.55+ others(18): Show |
VSIG4 | ENSG00000155659.15 | transcript | ENST00000374737.9 | protein_coding | 1/7 | chrX | TogoVar | |||||||
VSIG4_chrX_66016738_66045080 | 66037163 | A | ATAG | intron_variant | MODIFIER | NA18906.hp2 NA19005.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0112 a0001c0001t0001g0120 |
2 | 216 | 0.0093 | 3 | c.55+ others(18): Show |
VSIG4 | ENSG00000155659.15 | transcript | ENST00000374737.9 | protein_coding | 1/7 | chrX | TogoVar | |||||||
VSIG4_chrX_66016738_66045080 | 66043156 | C | CACA | upstream_gene_variant | MODIFIER | HG02293.hp1 HG04199.hp1 NA18990.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0087 a0001c0001t0001g0147 |
3 | 212 | 0.0142 | 3 | c.-31 others(14): Show |
VSIG4 | ENSG00000155659.15 | transcript | ENST00000374737.9 | protein_coding | 3077 | chrX | TogoVar | |||||||
VSIG4_chrX_66016738_66045080 | 66044855 | C | CAAA | upstream_gene_variant | MODIFIER | HG00733.hp2 HG00735.hp1 HG00738.hp1 others(35): Show |
a0001a0003a0005 | a0001c0001a0001c0004a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(3): Show | a0001c0001t0001g0004 a0001c0001t0001g0022 a0001c0001t0001g0033 others(31): Show |
38 | 189 | 0.2011 | 3 | c.-48 others(14): Show |
VSIG4 | ENSG00000155659.15 | transcript | ENST00000374737.9 | protein_coding | 4776 | chrX | TogoVar | |||||||
VSIG8_chr1_159849316_159867657 | 159857575 | C | CAAA | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00544.hp1 others(120): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0016 a0001c0001t0001g0042 a0001c0001t0001g0052 others(27): Show |
123 | 372 | 0.3306 | 3 | c.652 others(18): Show |
VSIG8 | ENSG00000243284.1 | transcript | ENST00000368100.1 | protein_coding | 4/6 | chr1 | TogoVar | |||||||
VSIR_chr10_71742556_71778520 | 71754314 | A | ATAG | intron_variant | MODIFIER | HG00099.hp2 HG00621.hp1 HG00621.hp2 others(61): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0002a0001c0001t0010a0001c0001t0018others(30): Show | a0001c0001t0002g0156 a0001c0001t0002g0274 a0001c0001t0010g0143 others(43): Show |
64 | 460 | 0.1391 | 3 | c.676 others(20): Show |
VSIR | ENSG00000107738.20 | transcript | ENST00000394957.8 | protein_coding | 4/6 | chr10 | TogoVar | |||||||
VSNL1_chr2_17535696_17662018 | 17567353 | C | CTTT | intron_variant | MODIFIER | HG01069.hp2 HG01168.hp1 HG01168.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0043 a0001c0001t0002g0122 a0001c0001t0002g0143 others(16): Show |
21 | 27 | 0.7778 | 3 | c.-5- others(20): Show |
VSNL1 | ENSG00000163032.12 | transcript | ENST00000295156.9 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VSNL1_chr2_17535696_17662018 | 17642309 | C | CTTT | intron_variant | MODIFIER | HG02257.hp1 HG02280.hp2 HG02559.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0020a0001c0001t0022others(1): Show | a0001c0001t0003g0074 a0001c0001t0020g0008 a0001c0001t0020g0117 others(4): Show |
9 | 79 | 0.1139 | 3 | c.163 others(20): Show |
VSNL1 | ENSG00000163032.12 | transcript | ENST00000295156.9 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VSTM1_chr19_54035825_54068897 | 54039488 | C | CAAA | downstream_gene_variant | MODIFIER | HG00609.hp2 HG00738.hp1 HG01433.hp1 others(24): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0023 others(18): Show |
27 | 317 | 0.0852 | 3 | c.*14 others(14): Show |
VSTM1 | ENSG00000189068.11 | transcript | ENST00000338372.7 | protein_coding | 1336 | chr19 | TogoVar | |||||||
VSTM1_chr19_54035825_54068897 | 54040356 | T | TTTG | downstream_gene_variant | MODIFIER | HG00609.hp2 HG01884.hp1 HG02451.hp2 others(11): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0023 others(8): Show |
14 | 440 | 0.0318 | 3 | c.*60 others(12): Show |
VSTM1 | ENSG00000189068.11 | transcript | ENST00000338372.7 | protein_coding | 468 | chr19 | TogoVar | |||||||
VSTM1_chr19_54035825_54068897 | 54049991 | A | ATTT | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00639.hp2 others(14): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0011 | a0001c0001t0002a0001c0001t0003a0002c0002t0001others(3): Show | a0001c0001t0002g0140 a0001c0001t0003g0307 a0002c0002t0001g0014 others(9): Show |
17 | 302 | 0.0563 | 3 | c.394 others(20): Show |
VSTM1 | ENSG00000189068.11 | transcript | ENST00000338372.7 | protein_coding | 4/8 | chr19 | TogoVar | |||||||
VSTM1_chr19_54035825_54068897 | 54056209 | C | CTTT | intron_variant | MODIFIER | HG00621.hp1 HG01952.hp2 HG02015.hp1 others(9): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0002c0004others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0004t0001others(2): Show | a0001c0001t0001g0035 a0001c0001t0001g0111 a0001c0001t0001g0113 others(8): Show |
12 | 412 | 0.0291 | 3 | c.355 others(20): Show |
VSTM1 | ENSG00000189068.11 | transcript | ENST00000338372.7 | protein_coding | 3/8 | chr19 | TogoVar | |||||||
VSTM1_chr19_54035825_54068897 | 54061016 | C | CTTT | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG00423.hp2 others(20): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0271 a0001c0001t0002g0002 a0001c0001t0002g0006 others(13): Show |
23 | 287 | 0.0801 | 3 | c.35- others(18): Show |
VSTM1 | ENSG00000189068.11 | transcript | ENST00000338372.7 | protein_coding | 1/8 | chr19 | TogoVar | |||||||
VSTM2B_chr19_29520994_29569551 | 29522984 | C | CAAA | upstream_gene_variant | MODIFIER | HG00738.hp1 HG01070.hp2 HG01071.hp2 others(22): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(3): Show | a0001c0001t0001g0027 a0001c0001t0001g0247 a0001c0001t0001g0269 others(20): Show |
25 | 219 | 0.1142 | 3 | c.-36 others(14): Show |
VSTM2B | ENSG00000187135.8 | transcript | ENST00000335523.8 | protein_coding | 3009 | chr19 | TogoVar | |||||||
VSTM2B_chr19_29520994_29569551 | 29534726 | A | AAAG | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp1 HG00438.hp1 others(136): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(11): Show | a0001c0001t0001g0036 a0001c0001t0001g0075 a0001c0001t0001g0247 others(122): Show |
139 | 405 | 0.3432 | 3 | c.769 others(20): Show |
VSTM2B | ENSG00000187135.8 | transcript | ENST00000335523.8 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
VSTM2B_chr19_29520994_29569551 | 29544525 | C | CAAA | intron_variant | MODIFIER | HG00423.hp2 HG00609.hp2 HG02809.hp1 others(6): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(2): Show | a0001c0001t0001g0260 a0001c0003t0001g0011 a0001c0003t0001g0043 others(5): Show |
9 | 66 | 0.1364 | 3 | c.769 others(22): Show |
VSTM2B | ENSG00000187135.8 | transcript | ENST00000335523.8 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
VSTM2B_chr19_29520994_29569551 | 29563313 | T | TGCA | intron_variant | MODIFIER | HG00544.hp1 HG02056.hp2 HG02132.hp2 others(14): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0009a0001c0003t0002others(2): Show | a0001c0001t0002g0169 a0001c0001t0002g0174 a0001c0001t0002g0227 others(11): Show |
17 | 406 | 0.0419 | 3 | c.770 others(18): Show |
VSTM2B | ENSG00000187135.8 | transcript | ENST00000335523.8 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
VSTM2L_chr20_37898127_37950350 | 37924676 | T | TCAG | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00639.hp2 others(62): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0021 a0001c0001t0001g0060 a0001c0001t0001g0226 others(55): Show |
65 | 342 | 0.1901 | 3 | c.122 others(20): Show |
VSTM2L | ENSG00000132821.12 | transcript | ENST00000373461.9 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
VSTM2L_chr20_37898127_37950350 | 37927353 | G | GTTT | intron_variant | MODIFIER | HG02145.hp2 HG02717.hp1 HG02896.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(1): Show | a0001c0001t0001g0059 a0001c0001t0001g0242 a0001c0001t0001g0243 others(7): Show |
10 | 333 | 0.0300 | 3 | c.122 others(20): Show |
VSTM2L | ENSG00000132821.12 | transcript | ENST00000373461.9 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
VSTM2L_chr20_37898127_37950350 | 37948623 | C | CAAA | downstream_gene_variant | MODIFIER | HG00639.hp1 HG00733.hp2 HG01123.hp1 others(38): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(8): Show | a0001c0001t0001g0032 a0001c0001t0003g0002 a0001c0001t0003g0005 others(34): Show |
41 | 133 | 0.3083 | 3 | c.*43 others(14): Show |
VSTM2L | ENSG00000132821.12 | transcript | ENST00000373461.9 | protein_coding | 3274 | chr20 | TogoVar | |||||||
VSTM4_chr10_49009236_49120522 | 49035669 | C | CAAA | intron_variant | MODIFIER | HG00323.hp1 HG00621.hp2 HG00639.hp2 others(11): Show |
a0001a0002a0005 | a0001c0001a0001c0004a0001c0008others(2): Show | a0001c0001t0002a0001c0004t0006a0001c0008t0006others(5): Show | a0001c0001t0002g0222 a0001c0004t0006g0059 a0001c0008t0006g0023 others(10): Show |
14 | 37 | 0.3784 | 3 | c.837 others(22): Show |
VSTM4 | ENSG00000165633.13 | transcript | ENST00000332853.9 | protein_coding | 7/7 | chr10 | TogoVar |