Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(34): Show AAAAAAAAAAATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA20300.hp2 NA18961.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0062 a0001c0001t0001 a0001c0001t0062	a0001c0001t0001g0100 a0001c0001t0062g0089 a0001c0001t0001g0100 a0001c0001t0062g0089	2	10	0.2000	41	c.952 others(58): Show c.952-3623_952-3622insAAAAAAAAATATATATATATATATATAT ATATATATATATA		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYG11B_chr1_52721453_52832336	52776229	A A	AAAAAAAA others(34): Show AAAAAAAAATATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	9	0.1111	41	c.952 others(58): Show c.952-3623_952-3622insAAAAAAATATATATATATATATATATAT ATATATATATATA		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13					INFO_REALIGN_3_PRIME	chr1	TogoVar