Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C1orf159_chr1_1076823_1121089	1077455	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGAGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG02132.hp2 HG02683.hp2 others(2): Show HG01167.hp2 HG02132.hp2 HG02683.hp2 NA18970.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 others(2): Show a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0165 a0001c0001t0003g0253	5	326	0.0153	30	c.54 others(41): Show c.5437_*5438insACCCCTCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4367		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077481	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp1 HG02280.hp1 HG03540.hp2 HG02080.hp1 HG02280.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0281 a0001c0001t0003g0104 a0001c0001t0003g0286 a0001c0001t0002g0281 a0001c0001t0003g0104 a0001c0001t0003g0286	3	326	0.0092	30	c.54 others(41): Show c.5411_*5412insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4341		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077513	G G	GGTGGCTG others(23): Show GGTGGCTGTGGCTATGGGGACTCCGTGCCGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0126 a0001c0001t0003g0126	1	326	0.0031	30	c.53 others(41): Show c.5379_*5380insTCGGCACGGAGTCCCCATAGCCACAGCCAC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4309		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077515	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	326	0.0031	30	c.53 others(41): Show c.5377_*5378insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4307		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077527	T T	TGGAGACT others(23): Show TGGAGACTCCATGGGGGGAGGCTGAGGCTAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0112 a0001c0001t0005g0112	1	326	0.0031	30	c.53 others(41): Show c.5365_*5366insCTAGCCTCAGCCTCCCCCCATGGAGTCTCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4295		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077781	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	326	0.0031	30	c.51 others(41): Show c.5111_*5112insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		4041		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077840	C C	CCGGGAGG others(23): Show CCGGGAGGCTGAGGCTATGGGGACTCCGTGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG02273.hp1 HG02683.hp1 others(1): Show HG01123.hp1 HG02273.hp1 HG02683.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0001t0001g0089 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0001t0001g0089 a0001c0001t0001g0151	4	326	0.0123	30	c.50 others(41): Show c.5052_*5053insCCACGGAGTCCCCATAGCCTCAGCCTCCCG	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3982		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077845	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18977.hp1 NA19012.hp2 NA18977.hp1 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0193 a0001c0001t0001g0029 a0001c0001t0001g0193	2	326	0.0061	30	c.50 others(41): Show c.5047_*5048insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3977		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077875	A A	TGGCTGAG others(23): Show TGGCTGAGGCTATGGGGACTCCGTGGGGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00597.hp2 HG00673.hp1 others(11): Show HG00280.hp1 HG00597.hp2 HG00673.hp1 HG01943.hp2 HG02015.hp1 HG02129.hp2 HG02165.hp2 HG03017.hp2 NA18940.hp1 NA18943.hp2 NA18944.hp1 NA18952.hp1 NA18986.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0001 a0001c0001t0018	a0001c0001t0001g0002 a0001c0001t0001g0023 a0001c0001t0001g0133 others(11): Show a0001c0001t0001g0002 a0001c0001t0001g0023 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0213 a0001c0001t0001g0264 a0001c0001t0018g0134	14	326	0.0429	30	c.50 others(41): Show c.5018_*5019insCCCCCCACGGAGTCCCCATAGCCTCAGCCA	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3948		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1077991	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG02683.hp1 NA18998.hp1 HG01123.hp1 HG02683.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0089 a0001c0001t0001g0151 a0001c0001t0001g0051 a0001c0001t0001g0089 a0001c0001t0001g0151	3	326	0.0092	30	c.49 others(41): Show c.4901_*4902insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3831		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078033	T T	TCTATGGG others(23): Show TCTATGGGGACTCCGTTGGGGGAGGCTGAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01106.hp1 HG02683.hp2 others(2): Show HG00735.hp2 HG01106.hp1 HG02683.hp2 HG03704.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0083 a0001c0001t0003g0121 a0001c0001t0003g0174 others(2): Show a0001c0001t0003g0083 a0001c0001t0003g0121 a0001c0001t0003g0174 a0001c0001t0003g0253 a0001c0001t0003g0298	5	326	0.0153	30	c.48 others(41): Show c.4859_*4860insCCTCAGCCTCCCCCAACGGAGTCCCCATAG	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3789		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078067	T T	TGGGGACT others(23): Show TGGGGACTCCATCGGGGGAGGCTGAGGCTAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0273 a0001c0001t0003g0273	1	326	0.0031	30	c.48 others(41): Show c.4825_*4826insCTAGCCTCAGCCTCCCCCGATGGAGTCCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3755		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078115	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02735.hp1 HG03239.hp1 NA18945.hp1 HG02735.hp1 HG03239.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0021 a0001c0001t0001 a0001c0001t0021	a0001c0001t0001g0084 a0001c0001t0001g0177 a0001c0001t0021g0313 a0001c0001t0001g0084 a0001c0001t0001g0177 a0001c0001t0021g0313	3	326	0.0092	30	c.47 others(41): Show c.4777_*4778insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3707		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078205	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG01081.hp2 HG02109.hp1 others(6): Show HG00438.hp1 HG01081.hp2 HG02109.hp1 HG04115.hp1 NA18966.hp2 NA18971.hp1 NA19056.hp2 NA19079.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0036 a0001c0001t0001g0043 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0036 a0001c0001t0001g0043 a0001c0001t0001g0156 a0001c0001t0001g0182 a0001c0001t0001g0194 a0001c0001t0001g0201 a0001c0001t0001g0204 a0001c0001t0001g0214	9	326	0.0276	30	c.46 others(41): Show c.4687_*4688insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3617		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078233	G G	GGTGGCTG others(23): Show GGTGGCTGTGGCTATGGGGACTCCGTGCCGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG03471.hp2 HG01884.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0065 a0001c0001t0007g0144 a0001c0001t0002g0065 a0001c0001t0007g0144	2	326	0.0061	30	c.46 others(41): Show c.4659_*4660insTCGGCACGGAGTCCCCATAGCCACAGCCAC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3589		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078261	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	326	0.0031	30	c.46 others(41): Show c.4631_*4632insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3561		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078273	T T	TCTATGGG others(23): Show TCTATGGGGACTCCGTGAGGGGTGGCTGAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0310 a0001c0001t0003g0310	1	326	0.0031	30	c.46 others(41): Show c.4619_*4620insCCTCAGCCACCCCTCACGGAGTCCCCATAG	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3549		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078325	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0181	1	326	0.0031	30	c.45 others(41): Show c.4567_*4568insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3497		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078351	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG03927.hp1 NA19005.hp1 HG01192.hp1 HG03927.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0014 a0001c0001t0001g0164 a0001c0001t0016g0020 a0001c0001t0001g0014 a0001c0001t0001g0164 a0001c0001t0016g0020	3	326	0.0092	30	c.45 others(41): Show c.4541_*4542insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3471		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078385	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	326	0.0031	30	c.45 others(41): Show c.4507_*4508insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3437		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078437	G G	GTGGGGGG others(23): Show GTGGGGGGAGGCTGAGGCTATGGGGACTCCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0057 a0001c0001t0003g0057	1	326	0.0031	30	c.44 others(41): Show c.4455_*4456insTGGAGTCCCCATAGCCTCAGCCTCCCCCCA	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3385		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078445	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	326	0.0031	30	c.44 others(41): Show c.4447_*4448insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3377		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078471	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	326	0.0031	30	c.44 others(41): Show c.4421_*4422insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3351		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078505	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp1 HG00673.hp2 others(22): Show HG00438.hp2 HG00544.hp1 HG00673.hp2 HG01346.hp1 HG01928.hp2 HG01943.hp1 HG02071.hp1 HG02132.hp1 HG02273.hp1 HG02559.hp1 HG02647.hp1 HG03927.hp2 HG03942.hp1 NA18944.hp1 NA18945.hp1 NA18955.hp1 NA18960.hp1 NA18983.hp1 NA18990.hp1 NA19012.hp1 NA19074.hp2 NA19079.hp2 NA19085.hp1 NA19091.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(22): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0037 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0092 a0001c0001t0001g0098 a0001c0001t0001g0130 a0001c0001t0001g0136 a0001c0001t0001g0142 a0001c0001t0001g0161 a0001c0001t0001g0179 a0001c0001t0001g0189 a0001c0001t0001g0197 a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0244 a0001c0001t0001g0250 a0001c0001t0009g0229 a0001c0001t0009g0231	25	326	0.0767	30	c.43 others(41): Show c.4387_*4388insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3317		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078565	A A	AGGCTGAG others(23): Show AGGCTGAGTCTATGGGGACTCCGTGAGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0273 a0001c0001t0003g0273	1	326	0.0031	30	c.43 others(41): Show c.4327_*4328insACCCCTCACGGAGTCCCCATAGACTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3257		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078621	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG02056.hp1 NA18971.hp1 others(1): Show HG01081.hp2 HG02056.hp1 NA18971.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0204 others(1): Show a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0204 a0001c0001t0001g0211	4	326	0.0123	30	c.42 others(41): Show c.4271_*4272insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3201		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078651	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG03704.hp1 HG00673.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0200 a0001c0001t0001g0155 a0001c0001t0001g0200	2	326	0.0061	30	c.42 others(41): Show c.4241_*4242insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3171		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078681	C C	CGGGAGGC others(23): Show CGGGAGGCTGAGGCTATGGGGACTCCGTGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00438.hp2 HG00544.hp1 others(41): Show HG00280.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00673.hp2 HG01081.hp1 HG01109.hp1 HG01346.hp1 HG01928.hp2 HG01943.hp2 HG02015.hp1 HG02071.hp1 HG02109.hp1 HG02129.hp2 HG02165.hp2 HG02293.hp1 HG02735.hp1 HG03239.hp1 HG03688.hp1 HG03831.hp1 HG03927.hp1 NA18747.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18952.hp1 NA18955.hp2 NA18960.hp1 NA18967.hp1 NA18977.hp1 NA18983.hp1 NA18986.hp1 NA18990.hp1 NA19012.hp1 NA19012.hp2 NA19079.hp2 NA19085.hp1 NA19091.hp2 NA20129.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0008 a0001c0001 a0004c0008	a0001c0001t0001 a0001c0001t0018 a0001c0001t0021 others(1): Show a0001c0001t0001 a0001c0001t0018 a0001c0001t0021 a0004c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(40): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0037 a0001c0001t0001g0044 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0090 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0154 a0001c0001t0001g0161 a0001c0001t0001g0173 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0186 a0001c0001t0001g0193 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0219 a0001c0001t0001g0244 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0255 a0001c0001t0001g0270 a0001c0001t0018g0134 a0001c0001t0021g0313 a0004c0008t0001g0049	44	326	0.1350	30	c.42 others(41): Show c.4211_*4212insCCCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3141		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078701	G G	GACTCCGT others(23): Show GACTCCGTGGGGGGAGGCTGAGGCTATGGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0121 a0001c0001t0003g0121	1	326	0.0031	30	c.41 others(41): Show c.4191_*4192insGCCCATAGCCTCAGCCTCCCCCCACGGAGT	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3121		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078723	G G	GCTATGGG others(23): Show GCTATGGGGACTCCGTGCCGGGAGGCTGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0261 a0001c0001t0001g0261	1	326	0.0031	30	c.41 others(41): Show c.4169_*4170insACTCAGCCTCCCGGCACGGAGTCCCCATAG	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3099		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078739	G G	GGGGGGGA others(23): Show GGGGGGGAGGCTGAGGCTATGGGGACTCCGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	326	0.0031	30	c.41 others(41): Show c.4153_*4154insACGGAGTCCCCATAGCCTCAGCCTCCCCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3083		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078741	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0181	1	326	0.0031	30	c.41 others(41): Show c.4151_*4152insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3081		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078787	T T	TGGGGGAC others(23): Show TGGGGGACTCCGTGGGGGAGGCTGAGGCTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	326	0.0031	30	c.41 others(41): Show c.4105_*4106insATAGCCTCAGCCTCCCCCACGGAGTCCCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3035		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078801	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG01192.hp1 HG00423.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0245 a0001c0001t0016g0020 a0001c0001t0001g0245 a0001c0001t0016g0020	2	326	0.0061	30	c.40 others(41): Show c.4091_*4092insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		3021		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078895	A A	AGGCTGAG others(23): Show AGGCTGAGGCTATGGGGACTCCGTGGGGGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG01099.hp2 HG01192.hp2 others(19): Show HG01081.hp2 HG01099.hp2 HG01192.hp2 HG01261.hp1 HG02056.hp1 HG02071.hp2 HG02559.hp1 HG02572.hp1 HG02647.hp1 HG02683.hp1 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18971.hp1 NA18975.hp1 NA18983.hp2 NA18998.hp1 NA18999.hp2 NA19054.hp2 NA19068.hp1 NA19077.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0033 others(19): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0087 a0001c0001t0001g0109 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0163 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0199 a0001c0001t0001g0204 a0001c0001t0001g0211 a0001c0001t0001g0220 a0001c0001t0001g0303 a0001c0001t0009g0052 a0001c0001t0009g0229 a0001c0001t0009g0231	22	326	0.0675	30	c.39 others(41): Show c.3997_*3998insACCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		2927		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078955	T T	TGGCTGAG others(23): Show TGGCTGAGGCTATGGGGACTCCGTGGGGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00423.hp2 others(37): Show HG00099.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01192.hp1 HG01192.hp2 HG01261.hp1 HG01358.hp1 HG01934.hp1 HG02056.hp1 HG02071.hp2 HG02257.hp1 HG02273.hp1 HG02559.hp1 HG02572.hp1 HG02647.hp1 HG02683.hp1 HG02895.hp1 HG02922.hp2 HG03927.hp2 HG03942.hp1 NA18612.hp1 NA18951.hp2 NA18960.hp2 NA18971.hp1 NA18975.hp1 NA18983.hp2 NA18998.hp1 NA18999.hp2 NA19005.hp1 NA19010.hp2 NA19054.hp2 NA19056.hp2 NA19074.hp1 NA19077.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0010 others(36): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0137 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0182 a0001c0001t0001g0199 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0211 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0245 a0001c0001t0001g0247 a0001c0001t0001g0303 a0001c0001t0001g0309 a0001c0001t0009g0052 a0001c0001t0009g0229 a0001c0001t0009g0231 a0001c0001t0016g0020 a0001c0001t0017g0167	40	326	0.1227	30	c.39 others(41): Show c.3937_*3938insTCCCCCCACGGAGTCCCCATAGCCTCAGCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		2867		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1078985	A A	TGGCTGAG others(23): Show TGGCTGAGGCTATGGGGACTCCGTGGGGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	326	0.0031	30	c.39 others(41): Show c.3908_*3909insCCCCCCACGGAGTCCCCATAGCCTCAGCCA	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		2838		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1079010	C C	CGGGGAGG others(23): Show CGGGGAGGCTGAGGCTATGGGGACTCCGTGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0260 a0001c0001t0003g0260	1	326	0.0031	30	c.38 others(41): Show c.3882_*3883insCCACGGAGTCCCCATAGCCTCAGCCTCCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		2812		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1079371	G G	GGGGAGGC others(23): Show GGGGAGGCTGAGGCTATGGGGACTCCGTGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp2 HG03195.hp2 HG02965.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0276 a0001c0001t0008g0278 a0001c0001t0008g0276 a0001c0001t0008g0278	2	326	0.0061	30	c.35 others(41): Show c.3521_*3522insGGCACGGAGTCCCCATAGCCTCAGCCTCCC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding		2451		chr1	TogoVar
C1orf159_chr1_1076823_1121089	1108908	G G	GGCACCGT others(23): Show GGCACCGTTCACCACAGCCACCATGTCTGCA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0237 a0001c0001t0008g0237	1	326	0.0031	30	c.-13 others(49): Show c.-136+7151_-136+7152insTGCAGACATGGTGGCTGTGGTGAACG GTGC	C1orf159	ENSG00000131591.18	transcript	ENST00000421241.7	protein_coding	1/9			chr1	TogoVar
C1orf21_chr1_184382029_184634019	184386787	G G	GCACACAC others(23): Show GCACACACACACACACACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	232	0.0043	30	c.-70 others(39): Show c.-706_-705insCACACACACACACACACACACACACACACA	C1orf21	ENSG00000116667.15	transcript	ENST00000235307.7	protein_coding		241		chr1	TogoVar
C1orf43_chr1_154201720_154225590	154203172	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0124 a0001c0001t0009g0124	1	374	0.0027	30	c.42 others(41): Show c.4251_*4280dupATATATATATATATATATATATATATATAT	C1orf43	ENSG00000143612.21	transcript	ENST00000368521.10	protein_coding		3547		chr1	TogoVar
C1orf50_chr1_42762249_42784491	42775762	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02027.hp2 HG03239.hp2 HG03688.hp2 HG02027.hp2 HG03239.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0107 a0001c0001t0046 a0001c0001t0107	a0001c0001t0046g0005 a0001c0001t0107g0005 a0001c0001t0046g0005 a0001c0001t0107g0005	3	418	0.0072	30	c.39 others(39): Show c.392_*393insTATATATATATATATATATATATATATATA	C1orf50	ENSG00000164008.17	transcript	ENST00000372525.7	protein_coding	5/5	393	INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf54_chr1_150267790_150285916	150284003	T T	TTTATTAT others(23): Show TTTATTATTATTATTATTATTATTATTATTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	434	0.0023	30	c.31 others(41): Show c.3172_*3173insTTATTATTATTATTATTATTATTATTATTA	C1orf54	ENSG00000118292.9	transcript	ENST00000369099.8	protein_coding		3088		chr1	TogoVar
C20orf141_chr20_2809987_2820830	2810644	T T	TGTATGCC others(23): Show TGTATGCCCCTCTTGCCCCTCCCCTCAACCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	414	0.0024	30	c.-44 others(41): Show c.-4407_-4406insGTATGCCCCTCTTGCCCCTCCCCTCAACCC	C20orf141	ENSG00000258713.3	transcript	ENST00000603872.2	protein_coding		4342		chr20	TogoVar
C20orf203_chr20_32626625_32678941	32666797	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01516.hp2 HG01891.hp2 others(3): Show HG01123.hp1 HG01516.hp2 HG01891.hp2 HG02572.hp2 HG02895.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0014 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0014 a0001c0001t0017	a0001c0001t0002g0250 a0001c0001t0003g0337 a0001c0001t0014g0172 others(3): Show a0001c0001t0002g0250 a0001c0001t0003g0337 a0001c0001t0014g0172 a0001c0001t0014g0173 a0001c0001t0014g0174 a0001c0001t0017g0343	6	360	0.0167	30	c.-26 others(49): Show c.-264+6834_-264+6835insTATATATATATATATATATATATATA TATA	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	1/5			chr20	TogoVar
C20orf203_chr20_32626625_32678941	32666797	T T	TTTTATAT others(23): Show TTTTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03710.hp2 NA19063.hp2 NA19082.hp1 HG03710.hp2 NA19063.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0050 a0001c0001t0002 a0001c0001t0050	a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0050g0278 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0050g0278	3	360	0.0083	30	c.-26 others(49): Show c.-264+6834_-264+6835insTATATATATATATATATATATATATA TAAA	C20orf203	ENSG00000198547.10	transcript	ENST00000608990.6	protein_coding	1/5			chr20	TogoVar
C21orf58_chr21_46296130_46328870	46298434	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp1 HG03491.hp2 HG03669.hp1 others(3): Show HG01516.hp1 HG03491.hp2 HG03669.hp1 NA18522.hp1 NA18970.hp1 NA19005.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0017 a0002c0002t0001 a0002c0002t0017	a0002c0002t0001g0106 a0002c0002t0001g0145 a0002c0002t0001g0174 others(3): Show a0002c0002t0001g0106 a0002c0002t0001g0145 a0002c0002t0001g0174 a0002c0002t0001g0189 a0002c0002t0001g0202 a0002c0002t0017g0124	6	378	0.0159	30	c.35 others(41): Show c.3564_*3565insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C21orf58	ENSG00000160298.18	transcript	ENST00000291691.12	protein_coding		2695		chr21	TogoVar
C21orf62_chr21_32785673_32818703	32804275	T T	TTTTATAT others(23): Show TTTTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0018 a0003c0004t0018	a0003c0004t0018g0147 a0003c0004t0018g0147	1	303	0.0033	30	c.-65 others(47): Show c.-65+3366_-65+3367insTATATATATATATATATATATATATATA AA	C21orf62	ENSG00000205929.11	transcript	ENST00000479548.2	protein_coding	3/3			chr21	TogoVar
C22orf42_chr22_32144006_32164303	32147902	A A	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0002 a0002c0007t0002	a0002c0007t0002g0012 a0002c0007t0002g0012	1	398	0.0025	30	c.16 others(41): Show c.1637_*1638insAAAAAAAAAAAATATATATATATATATATA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		1103		chr22	TogoVar

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