Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

Show

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC32_chr15_40548099_40570042	40569992	G G	GGTTTTGT others(23): Show GGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 HG02922.hp2 HG03453.hp1 HG02155.hp1 HG02922.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0053 a0001c0001t0015 a0001c0001t0053	a0001c0001t0015g0039 a0001c0001t0053g0183 a0001c0001t0015g0039 a0001c0001t0053g0183	3	400	0.0075	30	c.-50 others(41): Show c.-5030_-5029insAAAACAAAACAAAACAAAACAAAACAAAAC	CCDC32	ENSG00000128891.17	transcript	ENST00000416810.7	protein_coding		4951		chr15	TogoVar
CCDC34_chr11_27333512_27368215	27356888	T T	TGGTGGGG others(23): Show TGGTGGGGTGGGGTGGGGTGGGGTTGGGGGT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	358	0.0028	30	c.498 others(45): Show c.498+514_498+515insACCCCCAACCCCACCCCACCCCACCCCACC	CCDC34	ENSG00000109881.17	transcript	ENST00000328697.11	protein_coding	2/5			chr11	TogoVar
CCDC38_chr12_95862048_95947614	95908443	A A	AAGAGGGA others(23): Show AAGAGGGAGAGGGAGAGGGAGAGGGAGAGGG	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG04115.hp2 NA19054.hp2 HG03688.hp2 HG04115.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0005t0001 a0001c0001t0001 a0001c0002t0001 a0001c0005t0001	a0001c0001t0001g0100 a0001c0002t0001g0249 a0001c0005t0001g0203 a0001c0001t0001g0100 a0001c0002t0001g0249 a0001c0005t0001g0203	3	350	0.0086	30	c.305 others(47): Show c.305-2022_305-1993dupCCCTCTCCCTCTCCCTCTCCCTCTCCCT CT	CCDC38	ENSG00000165972.13	transcript	ENST00000344280.8	protein_coding	4/15			chr12	TogoVar
CCDC40_chr17_80031642_80105613	80037690	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0279 a0001c0002t0005g0279	1	378	0.0027	30	c.30- others(43): Show c.30-428_30-427insTATATATATATATATATATATATATATATA	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80056016	A A	ATATATAT others(23): Show ATATATATATATATATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0170 a0001c0005t0001g0170	1	378	0.0027	30	c.116 others(49): Show c.1160-2477_1160-2476insATATATATATATATTTTTTTTTTTTT TTTT	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80061856	T T	TCCCTAAC others(23): Show TCCCTAACCCTAACCCTAACCCTAACCCTAA	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0003 a0001c0014t0003	a0001c0014t0003g0367 a0001c0014t0003g0367	1	378	0.0027	30	c.144 others(49): Show c.1440+2897_1440+2898insTAACCCTAACCCTAACCCTAACCCTA ACCC	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC63_chr12_110841987_110912535	110858110	T T	TATAAAAT others(23): Show TATAAAATAAAATAAAATAAAATAAAATAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02809.hp2 HG02896.hp1 HG02486.hp2 HG02809.hp2 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0250 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0250	3	288	0.0104	30	c.180 others(45): Show c.180-454_180-425dupTAAAATAAAATAAAATAAAATAAAATAAAA	CCDC63	ENSG00000173093.13	transcript	ENST00000308208.10	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGTGTG others(23): Show GGGGTGTGTGTGTGTGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp1 HG02135.hp2 HG02615.hp2 others(3): Show HG00544.hp1 HG02135.hp2 HG02615.hp2 NA18983.hp2 NA19005.hp1 NA19066.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0002c0002t0003 a0001c0001t0001 a0002c0002t0002 a0002c0002t0003	a0001c0001t0001g0200 a0001c0001t0001g0203 a0002c0002t0002g0279 others(3): Show a0001c0001t0001g0200 a0001c0001t0001g0203 a0002c0002t0002g0279 a0002c0002t0002g0299 a0002c0002t0003g0027 a0002c0002t0003g0263	6	372	0.0161	30	c.-40 others(39): Show c.-401_-400insGGGTGTGTGTGTGTGTGTGTGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56556893	G G	GTGTGTGT others(23): Show GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0179 a0001c0001t0001g0181	2	372	0.0054	30	c.-35 others(39): Show c.-350_-349insTGTGTGTGTGTGTCTGTGTGTGTGTGTGTC	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		281		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56566107	C C	CTTTGTTT others(23): Show CTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA19058.hp1 NA19075.hp2 NA18969.hp1 NA19058.hp1 NA19075.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0054 a0001c0003t0001g0055 a0001c0003t0001g0056 a0001c0003t0001g0054 a0001c0003t0001g0055 a0001c0003t0001g0056	3	372	0.0081	30	c.545 others(45): Show c.545-483_545-454dupGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding	4/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCDC66_chr3_56552175_56626837	56597777	G G	GTTTTTCT others(23): Show GTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0004 a0004	a0004c0019 a0004c0019	a0004c0019t0002 a0004c0019t0002	a0004c0019t0002g0243 a0004c0019t0002g0243	1	372	0.0027	30	c.140 others(49): Show c.1404+3754_1404+3755insCTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCDC66_chr3_56552175_56626837	56597777	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01981.hp1 NA18993.hp1 NA18995.hp2 HG01981.hp1 NA18993.hp1 NA18995.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0005 a0002c0002t0003 a0002c0002t0005	a0002c0002t0003g0255 a0002c0002t0003g0266 a0002c0002t0005g0275 a0002c0002t0003g0255 a0002c0002t0003g0266 a0002c0002t0005g0275	3	372	0.0081	30	c.140 others(49): Show c.1404+3764_1404+3765insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCDC68_chr18_54896509_54964461	54950788	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00642.hp2 HG01074.hp1 others(21): Show HG00558.hp1 HG00642.hp2 HG01074.hp1 HG01891.hp1 HG02027.hp2 HG02257.hp1 HG02451.hp1 HG02723.hp1 HG02735.hp2 HG03491.hp1 HG04115.hp1 NA18942.hp2 NA18948.hp1 NA18948.hp2 NA18960.hp1 NA18964.hp2 NA18968.hp1 NA19001.hp1 NA19003.hp2 NA19043.hp1 NA19062.hp2 NA19066.hp2 NA19083.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0025 a0001c0001t0042	a0001c0001t0001g0010 a0001c0001t0001g0108 a0001c0001t0001g0109 others(20): Show a0001c0001t0001g0010 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0123 a0001c0001t0001g0154 a0001c0001t0001g0186 a0001c0001t0001g0200 a0001c0001t0002g0153 a0001c0001t0003g0122 a0001c0001t0003g0152 a0001c0001t0003g0174 a0001c0001t0003g0183 a0001c0001t0003g0205 a0001c0001t0012g0023 a0001c0001t0012g0024 a0001c0001t0012g0025 a0001c0001t0012g0026 a0001c0001t0012g0027 a0001c0001t0012g0038 a0001c0001t0014g0213 a0001c0001t0015g0206 a0001c0001t0025g0176 a0001c0001t0042g0175	24	326	0.0736	30	c.-10 others(49): Show c.-102-5312_-102-5311insTATATATATATATATATATATATATA TATA	CCDC68	ENSG00000166510.14	transcript	ENST00000591504.6	protein_coding	1/11			chr18	TogoVar
CCDC6_chr10_59783747_59911556	59862501	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG03540.hp1 NA18992.hp2 others(1): Show HG02155.hp2 HG03540.hp1 NA18992.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0009 a0001c0001t0002 a0001c0003t0009	a0001c0001t0002g0067 a0001c0001t0002g0082 a0001c0001t0002g0087 others(1): Show a0001c0001t0002g0067 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0003t0009g0193	4	288	0.0139	30	c.304 others(47): Show c.304-9800_304-9799insTATATATATATATATATATATATATATA TA	CCDC6	ENSG00000108091.11	transcript	ENST00000263102.7	protein_coding	1/8			chr10	TogoVar
CCDC77_chr12_396644_447642	416353	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATGTATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0321 a0002c0002t0001g0321	1	432	0.0023	30	c.271 others(47): Show c.271-2140_271-2139insATATATATATATATATATATATATGTAT AT	CCDC77	ENSG00000120647.10	transcript	ENST00000239830.9	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC7_chr10_32441140_32887864	32828461	A A	AGAAGAAG others(23): Show AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAG	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG01517.hp1 NA18947.hp1 others(1): Show HG01515.hp2 HG01517.hp1 NA18947.hp1 NA18965.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0126 a0001c0002t0001g0128 a0001c0002t0001g0176 others(1): Show a0001c0002t0001g0126 a0001c0002t0001g0128 a0001c0002t0001g0176 a0001c0002t0001g0177	4	368	0.0109	30	c.326 others(49): Show c.3268+3862_3268+3863insAGAAGAAGAAGAAGAAGAAGAAGAGG AAGA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32828461	A A	AGAAGAAG others(23): Show AGAAGAAGAAGAAGAAGAAGAAGAGGAAGAG	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA18952.hp1 NA18979.hp2 others(1): Show HG03130.hp2 NA18952.hp1 NA18979.hp2 NA18998.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0008c0010 a0001c0001 a0001c0002 a0008c0010	a0001c0001t0001 a0001c0002t0001 a0008c0010t0001 a0001c0001t0001 a0001c0002t0001 a0008c0010t0001	a0001c0001t0001g0307 a0001c0001t0001g0312 a0001c0002t0001g0127 others(1): Show a0001c0001t0001g0307 a0001c0001t0001g0312 a0001c0002t0001g0127 a0008c0010t0001g0131	4	368	0.0109	30	c.326 others(49): Show c.3268+3862_3268+3863insAGAAGAAGAAGAAGAAGAGGAAGAGG AAGA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32828461	A A	AGAAGAAG others(23): Show AGAAGAAGAAGAAGAAGAGGAAGAGGAAGAG	intron_variant intron_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0335 a0001c0001t0001g0335	1	368	0.0027	30	c.326 others(49): Show c.3268+3862_3268+3863insAGAAGAAGAAGAGGAAGAGGAAGAGG AAGA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32830121	G G	GATATATA others(23): Show GATATATATATACATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02040.hp1 HG01346.hp2 HG02040.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0159 a0001c0002t0001g0192 a0001c0002t0001g0159 a0001c0002t0001g0192	2	368	0.0054	30	c.326 others(49): Show c.3269-4683_3269-4682insCATATATATATATATATATATATATA TATA	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC7_chr10_32441140_32887864	32830121	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp1 HG00673.hp1 others(23): Show HG00099.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG01074.hp1 HG01243.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp1 HG02071.hp1 HG02109.hp1 HG02132.hp1 HG02698.hp1 HG02698.hp2 HG04199.hp2 HG04204.hp1 NA18946.hp1 NA18960.hp1 NA18963.hp1 NA18977.hp1 NA18983.hp2 NA18998.hp1 NA19030.hp2 NA19064.hp1 NA19065.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0006 a0009	a0001c0001 a0003c0004 a0003c0027 others(4): Show a0001c0001 a0003c0004 a0003c0027 a0005c0009 a0006c0008 a0006c0019 a0009c0011	a0001c0001t0001 a0003c0004t0001 a0003c0027t0001 others(4): Show a0001c0001t0001 a0003c0004t0001 a0003c0027t0001 a0005c0009t0003 a0006c0008t0001 a0006c0019t0001 a0009c0011t0001	a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0311 others(23): Show a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0311 a0001c0001t0001g0319 a0001c0001t0001g0328 a0001c0001t0001g0350 a0001c0001t0001g0354 a0001c0001t0001g0357 a0001c0001t0001g0359 a0003c0004t0001g0061 a0003c0004t0001g0083 a0003c0004t0001g0086 a0003c0004t0001g0087 a0003c0004t0001g0088 a0003c0004t0001g0091 a0003c0004t0001g0095 a0003c0004t0001g0096 a0003c0004t0001g0097 a0003c0004t0001g0105 a0003c0004t0001g0115 a0003c0027t0001g0069 a0005c0009t0003g0212 a0005c0009t0003g0215 a0006c0008t0001g0107 a0006c0019t0001g0165 a0009c0011t0001g0120	26	368	0.0707	30	c.326 others(49): Show c.3269-4674_3269-4673insATATATATATATATATATATATATAT ATAT	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	33/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC83_chr11_85850383_85925013	85917158	G G	GAAAGAAA others(23): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	334	0.0030	30	c.108 others(47): Show c.1080+926_1080+927insAAGAAAGAAAGAAAGAAAGAAAGAAAGA AA	CCDC83	ENSG00000150676.13	transcript	ENST00000342404.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC83_chr11_85850383_85925013	85917162	G G	GAAAGAAA others(23): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03492.hp2 HG03491.hp2 HG03492.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0059 a0001c0002t0001g0062 a0001c0002t0001g0059 a0001c0002t0001g0062	2	334	0.0060	30	c.108 others(47): Show c.1080+930_1080+931insAAGAAAGAAAGAAAGAAAGAAAGAAAGA AA	CCDC83	ENSG00000150676.13	transcript	ENST00000342404.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC83_chr11_85850383_85925013	85917166	G G	GAGAGAGG others(23): Show GAGAGAGGGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0015 a0001c0001t0003g0015	1	334	0.0030	30	c.108 others(47): Show c.1080+936_1080+937insGAGGGAAAGAAAGAAAGAAAGAAAGAAA GA	CCDC83	ENSG00000150676.13	transcript	ENST00000342404.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC88A_chr2_55282842_55424856	55367528	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01123.hp2 HG01169.hp1 others(4): Show HG00738.hp1 HG01123.hp2 HG01169.hp1 HG02071.hp2 HG02258.hp2 HG02300.hp1 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0002 a0001c0001t0016 a0003c0004t0038 a0001c0001t0002 a0001c0001t0016 a0003c0004t0038	a0001c0001t0002g0119 a0001c0001t0002g0133 a0001c0001t0002g0154 others(4): Show a0001c0001t0002g0119 a0001c0001t0002g0133 a0001c0001t0002g0154 a0001c0001t0002g0166 a0001c0001t0016g0021 a0001c0001t0016g0022 a0003c0004t0038g0193	7	316	0.0222	30	c.403 others(47): Show c.403-3496_403-3495insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	5/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55386459	G G	GTATTTTA others(23): Show GTATTTTATTTTATTTTATTTTATTTTATTT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02559.hp1 HG02683.hp1 others(3): Show HG01168.hp1 HG02559.hp1 HG02683.hp1 HG02922.hp1 NA19004.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 others(3): Show a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0229 a0001c0001t0001g0266 a0001c0001t0001g0304	6	316	0.0190	30	c.273 others(47): Show c.273+2318_273+2319insAAATAAAATAAAATAAAATAAAATAAAA TA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	3/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55390053	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG03491.hp1 NA18959.hp2 HG03491.hp1 NA18959.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0001 a0001c0001t0001 a0004c0007t0001	a0001c0001t0001g0243 a0004c0007t0001g0284 a0001c0001t0001g0243 a0004c0007t0001g0284	2	316	0.0063	30	c.165 others(47): Show c.165-1168_165-1167insCTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	2/32			chr2	TogoVar
CCDC88B_chr11_64335204_64362534	64336083	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp1 NA18971.hp1 NA19009.hp1 others(1): Show HG01255.hp1 NA18971.hp1 NA19009.hp1 NA19091.hp2	a0003 a0008 a0009 a0003 a0008 a0009	a0003c0003 a0008c0013 a0009c0014 a0003c0003 a0008c0013 a0009c0014	a0003c0003t0001 a0008c0013t0001 a0009c0014t0001 a0003c0003t0001 a0008c0013t0001 a0009c0014t0001	a0003c0003t0001g0025 a0003c0003t0001g0175 a0008c0013t0001g0040 others(1): Show a0003c0003t0001g0025 a0003c0003t0001g0175 a0008c0013t0001g0040 a0009c0014t0001g0038	4	400	0.0100	30	c.-41 others(41): Show c.-4184_-4183insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4120		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336085	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 NA19065.hp2 HG00558.hp1 NA19065.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0007 a0003c0003t0001g0003 a0001c0001t0001g0007 a0003c0003t0001g0003	2	400	0.0050	30	c.-41 others(41): Show c.-4182_-4181insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4118		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336089	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG03209.hp2 HG02818.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0027 a0001c0001t0001g0007 a0001c0001t0001g0027	2	400	0.0050	30	c.-41 others(41): Show c.-4178_-4177insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4114		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336091	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	400	0.0025	30	c.-41 others(41): Show c.-4176_-4175insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4112		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336093	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	400	0.0025	30	c.-41 others(41): Show c.-4174_-4173insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4110		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336112	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0171	1	400	0.0025	30	c.-41 others(41): Show c.-4155_-4154insTATATATATATATATATATATATATATCTC	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4091		chr11	TogoVar
CCDC88C_chr14_91266323_91422820	91293201	T T	TCCGCTCA others(23): Show TCCGCTCACCTGCCACGGCCCACCTTCCTGC	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0014 a0014	a0014c0025 a0014c0025	a0014c0025t0001 a0014c0025t0001	a0014c0025t0001g0023 a0014c0025t0001g0023	1	284	0.0035	30	c.411 others(47): Show c.4112+971_4112+972insGCAGGAAGGTGGGCCGTGGCAGGTGAGC GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293493	T T	TCCTCACC others(23): Show TCCTCACCTGCCACAGCCCACCTTCCTGTCC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02280.hp1 HG01891.hp1 HG02280.hp1	a0010 a0010	a0010c0022 a0010c0022	a0010c0022t0001 a0010c0022t0001	a0010c0022t0001g0030 a0010c0022t0001g0031 a0010c0022t0001g0030 a0010c0022t0001g0031	2	284	0.0070	30	c.411 others(47): Show c.4112+679_4112+680insGGACAGGAAGGTGGGCTGTGGCAGGTGA GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293537	G G	GGCCCACC others(23): Show GGCCCACCTTCCTGCCCCCTCGCCTGCCACA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG03453.hp1 HG02895.hp1 HG02897.hp2 HG03453.hp1	a0001 a0001	a0001c0006 a0001c0031 a0001c0006 a0001c0031	a0001c0006t0001 a0001c0031t0001 a0001c0006t0001 a0001c0031t0001	a0001c0006t0001g0110 a0001c0006t0001g0111 a0001c0031t0001g0007 a0001c0006t0001g0110 a0001c0006t0001g0111 a0001c0031t0001g0007	3	284	0.0106	30	c.411 others(47): Show c.4112+635_4112+636insTGTGGCAGGCGAGGGGGCAGGAAGGTGG GC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293558	G G	GCCTGCCA others(23): Show GCCTGCCACGGCCCACCTTCCTGCCCCCTCA	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0015 a0002c0002t0001g0015	1	284	0.0035	30	c.411 others(47): Show c.4112+614_4112+615insTGAGGGGGCAGGAAGGTGGGCCGTGGCA GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293567	G G	GGCCCACC others(23): Show GGCCCACCTTCCTGCCCCCTCGCCTGCCACA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG04115.hp2 NA18957.hp1 others(1): Show HG02723.hp1 HG04115.hp2 NA18957.hp1 NA18979.hp2	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0004 a0001c0006 a0002c0002 others(1): Show a0001c0004 a0001c0006 a0002c0002 a0012c0035	a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 others(1): Show a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 a0012c0035t0001	a0001c0004t0001g0009 a0001c0006t0001g0181 a0002c0002t0001g0147 others(1): Show a0001c0004t0001g0009 a0001c0006t0001g0181 a0002c0002t0001g0147 a0012c0035t0001g0073	4	284	0.0141	30	c.411 others(47): Show c.4112+605_4112+606insTGTGGCAGGCGAGGGGGCAGGAAGGTGG GC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293570	C C	CCACCTTC others(23): Show CCACCTTCCTGCCCCCTCGCCTGCCACAGCT	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18967.hp2 NA19060.hp1 others(2): Show NA18950.hp1 NA18967.hp2 NA19060.hp1 NA19077.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0009 a0001c0001 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0007t0001 a0001c0009t0002 a0001c0001t0001 a0001c0007t0001 a0001c0009t0002	a0001c0001t0001g0053 a0001c0001t0001g0103 a0001c0007t0001g0038 others(2): Show a0001c0001t0001g0053 a0001c0001t0001g0103 a0001c0007t0001g0038 a0001c0007t0001g0186 a0001c0009t0002g0257	5	284	0.0176	30	c.411 others(47): Show c.4112+602_4112+603insAGCTGTGGCAGGCGAGGGGGCAGGAAGG TG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293570	C C	CCACCTTC others(23): Show CCACCTTCCTGTCCCCTCGCCTGCCACAGCT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0185 a0001c0007t0001g0185	1	284	0.0035	30	c.411 others(47): Show c.4112+602_4112+603insAGCTGTGGCAGGCGAGGGGACAGGAAGG TG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293581	T T	TCCCCTCG others(23): Show TCCCCTCGCCTGCCACAGCCCACCTTCCTGC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0025 a0025	a0025c0033 a0025c0033	a0025c0033t0007 a0025c0033t0007	a0025c0033t0007g0004 a0025c0033t0007g0004	1	284	0.0035	30	c.411 others(47): Show c.4112+591_4112+592insGCAGGAAGGTGGGCTGTGGCAGGCGAGG GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC91_chr12_28185456_28555166	28362280	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0242 a0003c0003t0001g0242	1	242	0.0041	30	c.577 others(45): Show c.577-143_577-142insATATATATATATATATATATATATATATAT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28394711	G G	GCTCTCTC others(23): Show GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01243.hp1 HG01255.hp2 others(8): Show HG01071.hp1 HG01243.hp1 HG01255.hp2 HG02683.hp2 NA18956.hp1 NA18969.hp2 NA18973.hp2 NA18977.hp1 NA18983.hp2 NA19079.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0008 a0003c0003 a0003c0008	a0003c0003t0001 a0003c0008t0001 a0003c0003t0001 a0003c0008t0001	a0003c0003t0001g0208 a0003c0003t0001g0216 a0003c0003t0001g0222 others(8): Show a0003c0003t0001g0208 a0003c0003t0001g0216 a0003c0003t0001g0222 a0003c0003t0001g0226 a0003c0003t0001g0227 a0003c0003t0001g0231 a0003c0003t0001g0238 a0003c0003t0001g0239 a0003c0003t0001g0240 a0003c0003t0001g0242 a0003c0008t0001g0225	11	242	0.0455	30	c.762 others(47): Show c.762+3321_762+3322insTCTCTCTCTCTCTCTCTCTCTCTCTCTC TC	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28510236	C C	CGTGTGTG others(23): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0240 a0003c0003t0001g0240	1	242	0.0041	30	c.121 others(51): Show c.1215+26071_1215+26072insGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	12/12			chr12	TogoVar
CCDC9B_chr15_40326452_40345939	40333566	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0087 a0001c0001t0041g0087	1	422	0.0024	30	c.15 others(41): Show c.1591_*1592insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CCDC9B	ENSG00000188549.13	transcript	ENST00000397536.7	protein_coding	11/11	1591		chr15	TogoVar
CCKBR_chr11_6254838_6277127	6261462	T T	TATATATA others(23): Show TATATATATATACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0066 a0002c0002t0001g0066	1	426	0.0024	30	c.151 others(47): Show c.151+1384_151+1385insTATATATATACACACACACACACACACA CA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCL25_chr19_8047760_8067650	8059153	T T	TATATAAA others(23): Show TATATAAATATATATAAATATATATTATATA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03486.hp2 HG02896.hp2 HG03486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0058 a0002c0002t0001g0166 a0002c0002t0001g0058 a0002c0002t0001g0166	2	428	0.0047	30	c.445 others(47): Show c.445+1238_445+1239insAATATATATAAATATATATTATATAATA TA	CCL25	ENSG00000131142.14	transcript	ENST00000315626.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr19	TogoVar
CCL4_chr17_36098827_36110614	36101028	G G	GACATATA others(23): Show GACATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp1 HG06807.hp2 HG01358.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0025 a0001c0001t0001g0010 a0001c0001t0001g0025	2	413	0.0048	30	c.-28 others(41): Show c.-2878_-2877insACATATATATATATATATATATATATATAT	CCL4	ENSG00000275302.2	transcript	ENST00000615863.2	protein_coding		2798		chr17	TogoVar
CCN4_chr8_133186039_133236690	133217936	C C	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	396	0.0025	30	c.350 others(47): Show c.350-2620_350-2619insACACACACACACACACACACACACACAC AC	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCNB1_chr5_69162150_69183245	69164026	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0156 a0001c0002t0001g0156	1	420	0.0024	30	c.-32 others(41): Show c.-3237_-3236insAAAAAAAAAAAAATATATATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3123		chr5	TogoVar
CCNB1_chr5_69162150_69183245	69175982	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA19082.hp1 NA19083.hp2 HG01496.hp2 NA19082.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	3	420	0.0071	30	c.108 others(47): Show c.1083+449_1083+478dupTATATATATATATATATATATATATATA TA	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr5	TogoVar

Search by Variant

Search

Search Results