Joint Open Genome and Omics Platform (JoGo)

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Regionname

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

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No_samplehapid

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH13_chr16_82621969_83805640	83271422	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0049 a0001c0001t0033g0049	1	110	0.0091	30	c.636 others(49): Show c.636+53926_636+53955dupAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(23): Show TATATATATATAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0039 a0001c0002t0015g0039	1	110	0.0091	30	c.781 others(49): Show c.781+34933_781+34934insTATATATATAGAGAGAGAGAGAGAGA GAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(23): Show TATATATATATATATATAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp2 HG02965.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0019 a0001c0003t0011 a0001c0001t0019 a0001c0003t0011	a0001c0001t0019g0068 a0001c0003t0011g0073 a0001c0001t0019g0068 a0001c0003t0011g0073	2	110	0.0182	30	c.781 others(49): Show c.781+34933_781+34934insTATATATATATATATAGAGAGAGAGA GAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(23): Show TATATATATATATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02717.hp1 HG02257.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0027 a0001c0002t0013 a0001c0001t0027 a0001c0002t0013	a0001c0001t0027g0055 a0001c0002t0013g0092 a0001c0001t0027g0055 a0001c0002t0013g0092	2	110	0.0182	30	c.781 others(49): Show c.781+34933_781+34934insTATATATATATATATATAGAGAGAGA GAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83434904	C C	CTATTTTA others(23): Show CTATTTTATTTATATATATAATATATAAATA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01433.hp1 HG02027.hp2 others(11): Show HG01081.hp2 HG01433.hp1 HG02027.hp2 HG02055.hp1 HG02257.hp1 HG02451.hp1 HG03017.hp2 HG03209.hp1 HG03209.hp2 HG03540.hp2 HG03669.hp2 NA19030.hp2 NA19043.hp1 NA19240.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0009 a0003c0015	a0001c0001t0001 a0001c0001t0013 a0001c0001t0027 others(7): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0027 a0001c0002t0001 a0001c0002t0010 a0001c0002t0041 a0001c0005t0014 a0001c0006t0031 a0002c0009t0002 a0003c0015t0004	a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0087 others(11): Show a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0087 a0001c0001t0001g0104 a0001c0001t0013g0006 a0001c0001t0027g0055 a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0010g0064 a0001c0002t0041g0079 a0001c0005t0014g0040 a0001c0006t0031g0005 a0002c0009t0002g0050 a0003c0015t0004g0088	14	110	0.1273	30	c.782 others(49): Show c.782-51555_782-51526dupTAATATATAAATATATTTTATTTATA TATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83500332	C C	CTTCTTCT others(23): Show CTTCTTCTTCTTTTCTTCTTCTTCTTCTTTT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0002 a0002c0012t0002	a0002c0012t0002g0019 a0002c0012t0002g0019	1	110	0.0091	30	c.960 others(49): Show c.960+13677_960+13678insTTCTTCTTCTTTTCTTCTTCTTCTTC TTTT	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	7/13			chr16	TogoVar
CDH15_chr16_89166748_89200492	89189262	C C	CATGCCCA others(23): Show CATGCCCACACACAGATGCCGGCACACACAG	intron_variant intron_variant	MODIFIER	HG00423.hp1 NA18957.hp2 HG00423.hp1 NA18957.hp2	a0003 a0003	a0003c0013 a0003c0013	a0003c0013t0001 a0003c0013t0001	a0003c0013t0001g0083 a0003c0013t0001g0085 a0003c0013t0001g0083 a0003c0013t0001g0085	2	406	0.0049	30	c.979 others(45): Show c.979-951_979-922dupGATGCCCACACACAGATGCCGGCACACACA	CDH15	ENSG00000129910.8	transcript	ENST00000289746.3	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH15_chr16_89166748_89200492	89189282	G G	GGCACACA others(23): Show GGCACACACAGATGCCCACACACAGATGCCA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00597.hp1 others(98): Show HG00280.hp1 HG00323.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01167.hp2 HG01169.hp2 HG01515.hp2 HG01517.hp1 HG01891.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02486.hp2 HG02523.hp1 HG02572.hp2 HG02683.hp2 HG03098.hp1 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03831.hp2 HG04184.hp1 HG04204.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18987.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19054.hp2 NA19056.hp2 NA19057.hp2 NA19060.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp2 NA19083.hp1 NA19085.hp1 NA19085.hp2 NA19090.hp1 NA20129.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0002 a0003 a0019 others(1): Show a0002 a0003 a0019 a0023	a0002c0002 a0002c0004 a0002c0012 others(7): Show a0002c0002 a0002c0004 a0002c0012 a0002c0021 a0002c0041 a0003c0008 a0003c0009 a0003c0013 a0019c0040 a0023c0043	a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 others(10): Show a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0008 a0002c0004t0001 a0002c0012t0001 a0002c0021t0001 a0002c0041t0001 a0003c0008t0002 a0003c0009t0001 a0003c0013t0001 a0019c0040t0001 a0023c0043t0001	a0002c0002t0001g0002 a0002c0002t0001g0006 a0002c0002t0001g0011 others(73): Show a0002c0002t0001g0002 a0002c0002t0001g0006 a0002c0002t0001g0011 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0025 a0002c0002t0001g0030 a0002c0002t0001g0089 a0002c0002t0001g0090 a0002c0002t0001g0092 a0002c0002t0001g0093 a0002c0002t0001g0094 a0002c0002t0001g0095 a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0103 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0108 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0112 a0002c0002t0001g0120 a0002c0002t0001g0123 a0002c0002t0001g0126 a0002c0002t0001g0127 a0002c0002t0001g0128 a0002c0002t0001g0129 a0002c0002t0001g0130 a0002c0002t0001g0133 a0002c0002t0001g0135 a0002c0002t0001g0136 a0002c0002t0001g0139 a0002c0002t0001g0140 a0002c0002t0001g0142 a0002c0002t0001g0143 a0002c0002t0001g0144 a0002c0002t0001g0150 a0002c0002t0001g0151 a0002c0002t0001g0155 a0002c0002t0001g0158 a0002c0002t0001g0159 a0002c0002t0001g0278 a0002c0002t0001g0280 a0002c0002t0001g0281 a0002c0002t0001g0286 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0003g0060 a0002c0002t0008g0081 a0002c0004t0001g0132 a0002c0004t0001g0134 a0002c0004t0001g0137 a0002c0004t0001g0138 a0002c0004t0001g0141 a0002c0004t0001g0178 a0002c0012t0001g0002 a0002c0012t0001g0025 a0002c0012t0001g0099 a0002c0021t0001g0152 a0002c0021t0001g0153 a0002c0041t0001g0125 a0003c0008t0002g0009 a0003c0008t0002g0034 a0003c0008t0002g0036 a0003c0008t0002g0219 a0003c0008t0002g0221 a0003c0008t0002g0226 a0003c0008t0002g0227 a0003c0009t0001g0014 a0003c0009t0001g0196 a0003c0013t0001g0084 a0003c0013t0001g0277 a0019c0040t0001g0107 a0023c0043t0001g0131	101	406	0.2488	30	c.979 others(45): Show c.979-932_979-931insAGCACACACAGATGCCCACACACAGATGCC	CDH15	ENSG00000129910.8	transcript	ENST00000289746.3	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH15_chr16_89166748_89200492	89189322	C C	CATGCCGG others(23): Show CATGCCGGCACACACAGATGCCCACACACAG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0002 a0001c0010t0002	a0001c0010t0002g0238 a0001c0010t0002g0238	1	406	0.0025	30	c.979 others(45): Show c.979-900_979-871dupCCACACACAGATGCCGGCACACACAGATGC	CDH15	ENSG00000129910.8	transcript	ENST00000289746.3	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH18_chr5_19466296_19993200	19501176	A A	AATATATA others(23): Show AATATATATAATTACAATTACATATATAAAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03041.hp1 HG03041.hp2 HG02965.hp2 HG03041.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0003 a0001c0001t0024 a0001c0004t0003 a0001c0001t0003 a0001c0001t0024 a0001c0004t0003	a0001c0001t0003g0021 a0001c0001t0024g0029 a0001c0004t0003g0027 a0001c0001t0003g0021 a0001c0001t0024g0029 a0001c0004t0003g0027	3	138	0.0217	30	c.163 others(49): Show c.1630+1786_1630+1815dupGTTTATATATGTAATTGTAATTATAT ATAT	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	11/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTCCTCC others(23): Show CCTCCTCCTCCTCCTCCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0084 a0001c0004t0001g0084	1	138	0.0073	30	c.812 others(47): Show c.812-2464_812-2463insAAGAAGAAGAAGAAGGAGGAGGAGGAGG AG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTCCTCC others(23): Show CCTCCTCCTCCTCCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA18522.hp1 HG02965.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0018 a0001c0004t0003 a0001c0001t0018 a0001c0004t0003	a0001c0001t0018g0125 a0001c0004t0003g0027 a0001c0001t0018g0125 a0001c0004t0003g0027	2	138	0.0145	30	c.812 others(47): Show c.812-2464_812-2463insAAGAAGAAGAAGAAGAAGGAGGAGGAGG AG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTCCTTC others(23): Show CCTCCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG03453.hp2 HG01993.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0016 a0001c0003t0001 a0001c0001t0016 a0001c0003t0001	a0001c0001t0016g0018 a0001c0003t0001g0057 a0001c0001t0016g0018 a0001c0003t0001g0057	2	138	0.0145	30	c.812 others(47): Show c.812-2464_812-2463insAAGAAGAAGAAGAAGAAGAAGAAGAAGG AG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTTCTTC others(23): Show CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 NA20752.hp1 HG00099.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0011 a0001c0003 a0003c0011	a0001c0003t0001 a0003c0011t0001 a0001c0003t0001 a0003c0011t0001	a0001c0003t0001g0060 a0003c0011t0001g0082 a0001c0003t0001g0060 a0003c0011t0001g0082	2	138	0.0145	30	c.812 others(47): Show c.812-2493_812-2464dupAAGAAGAAGAAGAAGAAGAAGAAGAAGA AG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19748112	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0054 a0001c0001t0004g0054	1	138	0.0073	30	c.229 others(45): Show c.229-877_229-876insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	3/12			chr5	TogoVar
CDH19_chr18_66496083_66609090	66595191	A A	AAGCAGTG others(23): Show AAGCAGTGTTAAGAGGAAAGTTTATTAGTCT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0239 a0001c0002t0001g0239	1	354	0.0028	30	c.-11 others(49): Show c.-113+8733_-113+8762dupAGACTAATAAACTTTCCTCTTAACAC TGCT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	1/11			chr18	TogoVar
CDH1_chr16_68732292_68840537	68745611	A A	ATATATAT others(23): Show ATATATATATATGTGTATATATATGTATGTG	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03225.hp1 HG01884.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0134 a0001c0001t0002g0113 a0001c0001t0001g0134 a0001c0001t0002g0113	2	316	0.0063	30	c.163 others(47): Show c.163+7211_163+7212insGTGTATATATATGTATGTGTATATATAT AT	CDH1	ENSG00000039068.20	transcript	ENST00000261769.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH22_chr20_46168739_46313498	46181748	C C	CTTCTTCT others(23): Show CTTCTTCTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0113 a0001c0001t0004g0113	1	318	0.0031	30	c.166 others(49): Show c.1664-3552_1664-3551insAGAAAGAAAGAAAGAAAGAAAGAAGA AGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46197295	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01496.hp2 HG01361.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0029 a0001c0001t0003g0147 a0001c0001t0003g0029 a0001c0001t0003g0147	2	318	0.0063	30	c.142 others(49): Show c.1423+2127_1423+2128insATATATATATATATATATATATATAT ATAT	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	8/11			chr20	TogoVar
CDH23_chr10_71391920_71820947	71427193	A A	AGAGAAGA others(23): Show AGAGAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0006 a0006	a0006c0115 a0006c0115	a0006c0115t0004 a0006c0115t0004	a0006c0115t0004g0072 a0006c0115t0004g0072	1	196	0.0051	30	c.-5- others(47): Show c.-5-12634_-5-12633insGAGAAGAAAGAAAGAAAGAAAGAAAGAA AG	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69			chr10	TogoVar
CDH23_chr10_71391920_71820947	71515394	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCACACACA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03540.hp1 NA18906.hp2 HG02965.hp2 HG03540.hp1 NA18906.hp2	a0021 a0059 a0081 a0021 a0059 a0081	a0021c0158 a0059c0157 a0081c0098 a0021c0158 a0059c0157 a0081c0098	a0021c0158t0001 a0059c0157t0029 a0081c0098t0003 a0021c0158t0001 a0059c0157t0029 a0081c0098t0003	a0021c0158t0001g0171 a0059c0157t0029g0182 a0081c0098t0003g0162 a0021c0158t0001g0171 a0059c0157t0029g0182 a0081c0098t0003g0162	3	196	0.0153	30	c.429 others(47): Show c.429+4183_429+4184insTCTCTCTCTCTCTCTCTCTCTCACACAC AC	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	6/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71515394	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCACACA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0050 a0050	a0050c0156 a0050c0156	a0050c0156t0008 a0050c0156t0008	a0050c0156t0008g0031 a0050c0156t0008g0031	1	196	0.0051	30	c.429 others(47): Show c.429+4183_429+4184insTCTCTCTCTCTCTCTCTCTCTCTCACAC AC	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	6/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71689077	C C	CCAGGGGT others(23): Show CCAGGGGTGGTGGAGTCAGGGGTGGTGGAGT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0002 a0002	a0002c0063 a0002c0063	a0002c0063t0001 a0002c0063t0001	a0002c0063t0001g0151 a0002c0063t0001g0151	1	196	0.0051	30	c.205 others(49): Show c.2059+1372_2059+1373insTCAGGGGTGGTGGAGTCAGGGGTGGT GGAG	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	19/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71759846	C C	CACACACA others(23): Show CACACACACACATATACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02257.hp2 HG02622.hp1 others(2): Show HG01891.hp2 HG02257.hp2 HG02622.hp1 HG02723.hp2 HG02809.hp1	a0036 a0050 a0051 others(2): Show a0036 a0050 a0051 a0070 a0085	a0036c0166 a0050c0156 a0051c0147 others(2): Show a0036c0166 a0050c0156 a0051c0147 a0070c0056 a0085c0103	a0036c0166t0001 a0050c0156t0008 a0051c0147t0009 others(2): Show a0036c0166t0001 a0050c0156t0008 a0051c0147t0009 a0070c0056t0001 a0085c0103t0001	a0036c0166t0001g0187 a0050c0156t0008g0031 a0051c0147t0009g0022 others(2): Show a0036c0166t0001g0187 a0050c0156t0008g0031 a0051c0147t0009g0022 a0070c0056t0001g0179 a0085c0103t0001g0190	5	196	0.0255	30	c.484 others(51): Show c.4846-17833_4846-17832insCACACACACATATACACACACACA CACATA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	38/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71760110	C C	CATATATG others(23): Show CATATATGTGTGTATATATATGTATATACAT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01167.hp1 HG01169.hp1 HG01070.hp1 HG01167.hp1 HG01169.hp1	a0002 a0023 a0002 a0023	a0002c0011 a0023c0008 a0002c0011 a0023c0008	a0002c0011t0004 a0023c0008t0003 a0002c0011t0004 a0023c0008t0003	a0002c0011t0004g0071 a0023c0008t0003g0133 a0023c0008t0003g0136 a0002c0011t0004g0071 a0023c0008t0003g0133 a0023c0008t0003g0136	3	196	0.0153	30	c.484 others(51): Show c.4846-17491_4846-17462dupATGTATATACATATATATGTGTGT ATATAT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	38/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH2_chr18_27945966_28182130	28043463	T T	TATATATA others(23): Show TATATATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0152 a0001c0002t0002g0152	1	268	0.0037	30	c.173 others(49): Show c.173-29555_173-29554insTTATATATATATATATATATATATAT ATAT	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	2/15			chr18	TogoVar
CDH2_chr18_27945966_28182130	28166149	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0253 a0002c0003t0009g0253	1	268	0.0037	30	c.60+ others(47): Show c.60+10813_60+10814insATATATATATATATATATATATATATAT AT	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	1/15			chr18	TogoVar
CDH4_chr20_61247261_61945617	61534665	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19030.hp2 HG02145.hp1 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0007 a0001c0003 a0001c0007	a0001c0003t0037 a0001c0007t0010 a0001c0003t0037 a0001c0007t0010	a0001c0003t0037g0023 a0001c0007t0010g0037 a0001c0003t0037g0023 a0001c0007t0010g0037	2	106	0.0189	30	c.170 others(51): Show c.170-208876_170-208875insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61565062	T T	TTGGTGGT others(23): Show TTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0010 a0001c0007t0010	a0001c0007t0010g0018 a0001c0007t0010g0018	1	106	0.0094	30	c.170 others(51): Show c.170-178475_170-178474insGTGGTGGTGGTGGTGGTGGTGGTG GTGGTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61714021	T T	TTTTTATT others(23): Show TTTTTATTTTATTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03704.hp2 HG03139.hp2 HG03704.hp2	a0001 a0001	a0001c0003 a0001c0021 a0001c0003 a0001c0021	a0001c0003t0017 a0001c0021t0008 a0001c0003t0017 a0001c0021t0008	a0001c0003t0017g0067 a0001c0021t0008g0047 a0001c0003t0017g0067 a0001c0021t0008g0047	2	106	0.0189	30	c.170 others(49): Show c.170-29528_170-29499dupTATTTTATTTTATTTTATTTTATTTT ATTT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61714023	T T	TTTATGTT others(23): Show TTTATGTTATGTTATGTTATGTTATGTTATG	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG03209.hp1 HG02040.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0024 a0001c0007 a0002c0024	a0001c0007t0046 a0002c0024t0047 a0001c0007t0046 a0002c0024t0047	a0001c0007t0046g0066 a0002c0024t0047g0051 a0001c0007t0046g0066 a0002c0024t0047g0051	2	106	0.0189	30	c.170 others(49): Show c.170-29536_170-29535insGTTATGTTATGTTATGTTATGTTATG TTAT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH7_chr18_65746012_65895337	65780971	T T	TCTGATGC others(23): Show TCTGATGCTCATTTATTTGCACTAGCTATGG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0077 a0002c0004t0077	a0002c0004t0077g0100 a0002c0004t0077g0100	1	208	0.0048	30	c.210 others(49): Show c.210+17920_210+17949dupCTGATGCTCATTTATTTGCACTAGCT ATGG	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02451.hp2 HG00280.hp1 HG02451.hp2	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0006 a0002c0004t0080 a0002c0003t0006 a0002c0004t0080	a0002c0003t0006g0141 a0002c0004t0080g0180 a0002c0003t0006g0141 a0002c0004t0080g0180	2	208	0.0096	30	c.123 others(47): Show c.1235+123_1235+124insATATATATATATATATATATATATATAT AT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATTTATA others(23): Show GATTTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03831.hp2 HG03710.hp2 HG03831.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0044 a0002c0002t0097 a0002c0002t0044 a0002c0002t0097	a0002c0002t0044g0038 a0002c0002t0097g0065 a0002c0002t0044g0038 a0002c0002t0097g0065	2	208	0.0096	30	c.123 others(47): Show c.1235+111_1235+112insTTATATATATATATATATATATATATAT AT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH8_chr16_61642250_62041438	61739734	A A	AAAAAGAA others(23): Show AAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0028 a0001c0002t0028	a0001c0002t0028g0008 a0001c0002t0028g0008	1	168	0.0060	30	c.141 others(51): Show c.1415-12520_1415-12519insCTTTTCTTTTCTTTTCTTTTCTTT TCTTTT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	8/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61768367	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA19058.hp1 HG03486.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0030 a0001c0001t0005 a0001c0001t0030	a0001c0001t0005g0059 a0001c0001t0030g0003 a0001c0001t0005g0059 a0001c0001t0030g0003	2	168	0.0119	30	c.141 others(51): Show c.1414+20978_1414+20979insGGAGAGAGAGAGAGAGAGAGAGAG AGAGAG	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	8/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61953895	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0014 a0001c0001t0032g0014	1	168	0.0060	30	c.253 others(49): Show c.253-52452_253-52423dupTATATATATATATATATATATATATA TATA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960089	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18980.hp2 NA19007.hp1 HG02109.hp2 NA18980.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0043 a0001c0002t0004 a0001c0002t0075 a0001c0001t0043 a0001c0002t0004 a0001c0002t0075	a0001c0001t0043g0110 a0001c0002t0004g0140 a0001c0002t0075g0099 a0001c0001t0043g0110 a0001c0002t0004g0140 a0001c0002t0075g0099	3	168	0.0179	30	c.253 others(49): Show c.253-58646_253-58617dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960121	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01496.hp2 NA19002.hp2 HG01071.hp1 HG01496.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0050 a0001c0001t0072 a0001c0001t0011 a0001c0001t0050 a0001c0001t0072	a0001c0001t0011g0125 a0001c0001t0050g0127 a0001c0001t0072g0060 a0001c0001t0011g0125 a0001c0001t0050g0127 a0001c0001t0072g0060	3	168	0.0179	30	c.253 others(49): Show c.253-58678_253-58649dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960153	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	168	0.0060	30	c.253 others(49): Show c.253-58710_253-58681dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960284	C C	CACATATA others(23): Show CACATATATACATGTGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	168	0.0060	30	c.253 others(49): Show c.253-58812_253-58811insATGTGTATACACACACACATGTATAT ATGT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960310	C C	CATACATA others(23): Show CATACATATATACATGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0068 a0001c0001t0068	a0001c0001t0068g0080 a0001c0001t0068g0080	1	168	0.0060	30	c.253 others(49): Show c.253-58838_253-58837insATGTGTATACACACACATGTATATAT GTAT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960336	C C	CACATATA others(23): Show CACATATATACATGTGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0077 a0001c0001t0047g0077	1	168	0.0060	30	c.253 others(49): Show c.253-58893_253-58864dupATGTGTATACACACACACATGTATAT ATGT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960336	C C	CATACATA others(23): Show CATACATATATACATGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG01943.hp2 NA18964.hp2 NA18966.hp2 HG01943.hp2 NA18964.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0001t0002 a0001c0003t0002	a0001c0001t0002g0025 a0001c0003t0002g0143 a0001c0003t0002g0144 a0001c0001t0002g0025 a0001c0003t0002g0143 a0001c0003t0002g0144	3	168	0.0179	30	c.253 others(49): Show c.253-58864_253-58863insATGTGTATACACACACATGTATATAT GTAT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960377	A A	ATGTGTGT others(23): Show ATGTGTGTGTATACACATACATATATACATG	intron_variant intron_variant	MODIFIER	HG02572.hp1 NA19058.hp1 HG02572.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0048 a0001c0001t0005 a0001c0001t0048	a0001c0001t0005g0059 a0001c0001t0048g0044 a0001c0001t0005g0059 a0001c0001t0048g0044	2	168	0.0119	30	c.253 others(49): Show c.253-58905_253-58904insCATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDHR5_chr11_611583_629955	613610	A A	AGCTGTGA others(23): Show AGCTGTGAGTGACGGGGGTGGGCGGGGACAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	409	0.0024	30	c.37 others(41): Show c.3711_*3740dupCTGTCCCCGCCCACCCCCGTCACTCACAGC	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		2972		chr11	TogoVar
CDHR5_chr11_611583_629955	627743	C C	CCGTTCAC others(23): Show CCGTTCACAGACGCTCCCGTCCTCCCAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02559.hp2 HG03471.hp1 others(1): Show HG02080.hp1 HG02559.hp2 HG03471.hp1 NA18522.hp2	a0010 a0025 a0010 a0025	a0010c0017 a0025c0051 a0010c0017 a0025c0051	a0010c0017t0001 a0025c0051t0001 a0010c0017t0001 a0025c0051t0001	a0010c0017t0001g0045 a0010c0017t0001g0131 a0025c0051t0001g0120 a0010c0017t0001g0045 a0010c0017t0001g0131 a0025c0051t0001g0120	4	409	0.0098	30	c.-28 others(41): Show c.-2842_-2841insATTTTGGGAGGACGGGAGCGTCTGTGAACG	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		2789		chr11	TogoVar
CDIN1_chr15_36574626_36815244	36703269	T T	TGATAGAT others(23): Show TGATAGATCTATCAGATATATACATATATCA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01192.hp2 HG01243.hp1 others(3): Show HG00738.hp2 HG01192.hp2 HG01243.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0003 a0002c0002t0004 others(1): Show a0001c0001t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0017	a0001c0001t0002g0068 a0001c0001t0002g0069 a0002c0002t0003g0061 others(3): Show a0001c0001t0002g0068 a0001c0001t0002g0069 a0002c0002t0003g0061 a0002c0002t0004g0106 a0002c0002t0004g0107 a0002c0002t0017g0078	6	238	0.0252	30	c.545 others(47): Show c.545-5880_545-5851dupGATATATACATATATCAGATAGATCTAT CA	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDK12_chr17_39456486_39539544	39476711	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02976.hp2 HG01496.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0017 a0001c0001t0005g0024 a0001c0001t0004g0017 a0001c0001t0005g0024	2	260	0.0077	30	c.193 others(49): Show c.1931+4977_1931+4978insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK12_chr17_39456486_39539544	39532102	T T	TTCTCTCT others(23): Show TTCTCTCTCTCTCTATCTCTCTCTCTCTCTC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0092 a0001c0001t0036g0092	1	260	0.0039	30	c.79 others(39): Show c.799_*800insATCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	14/14	800	INFO_REALIGN_3_PRIME	chr17	TogoVar

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