Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LOXL2_chr8_23291897_23409120	23354588	C C	CTGTGTGT others(23): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0339 a0001c0001t0001g0339	1	348	0.0029	30	c.531 others(47): Show c.531+5501_531+5502insCACACACACACACACACACACACACACA CA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LPA_chr6_160526482_160669275	160654027	A A	AATATATA others(23): Show AATATATATTATATATAATATATAATATATT	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG04228.hp1 HG03239.hp2 HG04228.hp1	a0002 a0026 a0002 a0026	a0002c0002 a0026c0045 a0002c0002 a0026c0045	a0002c0002t0003 a0026c0045t0003 a0002c0002t0003 a0026c0045t0003	a0002c0002t0003g0132 a0026c0045t0003g0131 a0002c0002t0003g0132 a0026c0045t0003g0131	2	148	0.0135	30	c.50- others(45): Show c.50-3560_50-3531dupAATATATTATATATTATATATAATATATAT	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	1/38			chr6	TogoVar
LPIN2_chr18_2911999_3018144	2956311	G G	GGTGTGTG others(23): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02572.hp1 HG02717.hp1 others(1): Show HG01515.hp2 HG02572.hp1 HG02717.hp1 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0002 a0001c0001t0003 a0001c0001t0125 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0125 a0001c0018t0093	a0001c0001t0002g0252 a0001c0001t0003g0029 a0001c0001t0125g0232 others(1): Show a0001c0001t0002g0252 a0001c0001t0003g0029 a0001c0001t0125g0232 a0001c0018t0093g0140	4	380	0.0105	30	c.193 others(47): Show c.193-1742_193-1713dupACACACACACACACACACACACACACAC AC	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPP_chr3_188149157_188895671	188250966	T T	TCCCTTCC others(23): Show TCCCTTCCCTTCCCTTCCCTTCCCTTCCCTC	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0006 a0006	a0006c0016 a0006c0016	a0006c0016t0043 a0006c0016t0043	a0006c0016t0043g0058 a0006c0016t0043g0058	1	76	0.0132	30	c.-67 others(49): Show c.-67+25453_-67+25454insTCCCTTCCCTTCCCTCCCCTTCCCTT CCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188466804	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0036 a0001c0005t0036	a0001c0005t0036g0075 a0001c0005t0036g0075	1	76	0.0132	30	c.194 others(49): Show c.194-17787_194-17786insTATATATATATATATATATATATATA TATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188485796	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0007 a0007	a0007c0013 a0007c0013	a0007c0013t0003 a0007c0013t0003	a0007c0013t0003g0046 a0007c0013t0003g0046	1	76	0.0132	30	c.306 others(47): Show c.306+1110_306+1111insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188495064	T T	TTTTATAT others(23): Show TTTTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0004 a0004	a0004c0017 a0004c0017	a0004c0017t0044 a0004c0017t0044	a0004c0017t0044g0043 a0004c0017t0044g0043	1	76	0.0132	30	c.306 others(49): Show c.306+10361_306+10362insTTATATATATATATATATATATATAT ATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188592562	T T	TGTTTGTT others(23): Show TGTTTGTTTTTTTTTTTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0035 a0004c0010t0035	a0004c0010t0035g0060 a0004c0010t0035g0060	1	76	0.0132	30	c.430 others(49): Show c.430-16599_430-16598insGTTTGTTTTTTTTTTTTTTTTTTTTT TTTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188602176	T T	TAATATAT others(23): Show TAATATATATATAATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0070 a0002c0003t0009g0070	1	76	0.0132	30	c.430 others(47): Show c.430-6985_430-6984insAATATATATATAATATATATATATATAT AA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188658122	A A	ATTAGTTT others(23): Show ATTAGTTTAGTTTAGTTTAGTTTAGTTTAGT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01081.hp1 HG01081.hp2 others(16): Show HG00438.hp1 HG01081.hp1 HG01081.hp2 HG01167.hp1 HG01175.hp2 HG01256.hp1 HG01358.hp2 HG02486.hp1 HG02738.hp1 HG02886.hp2 HG02896.hp2 HG02970.hp2 HG03017.hp2 HG03195.hp1 HG03195.hp2 HG03239.hp1 HG03453.hp1 HG03540.hp2 NA18522.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0005 a0001c0006 others(4): Show a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0004 a0002c0015 a0004c0010	a0001c0002t0010 a0001c0002t0011 a0001c0002t0016 others(16): Show a0001c0002t0010 a0001c0002t0011 a0001c0002t0016 a0001c0002t0019 a0001c0005t0040 a0001c0005t0042 a0001c0005t0063 a0001c0006t0032 a0002c0003t0002 a0002c0003t0029 a0002c0003t0052 a0002c0003t0056 a0002c0003t0059 a0002c0004t0003 a0002c0004t0045 a0002c0004t0067 a0002c0004t0068 a0002c0015t0037 a0004c0010t0035	a0001c0002t0010g0025 a0001c0002t0011g0038 a0001c0002t0016g0028 others(16): Show a0001c0002t0010g0025 a0001c0002t0011g0038 a0001c0002t0016g0028 a0001c0002t0019g0041 a0001c0005t0040g0030 a0001c0005t0042g0037 a0001c0005t0063g0022 a0001c0006t0032g0005 a0002c0003t0002g0004 a0002c0003t0029g0059 a0002c0003t0052g0014 a0002c0003t0056g0016 a0002c0003t0059g0011 a0002c0004t0003g0050 a0002c0004t0045g0026 a0002c0004t0067g0008 a0002c0004t0068g0020 a0002c0015t0037g0051 a0004c0010t0035g0060	19	76	0.2500	30	c.111 others(51): Show c.1113+48292_1113+48293insTTTAGTTTAGTTTAGTTTAGTTTA GTTTAG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188731516	T T	TTTTTGTT others(23): Show TTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01167.hp2 HG01361.hp2 others(1): Show HG01081.hp1 HG01167.hp2 HG01361.hp2 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006	a0001c0001t0018 a0001c0002t0001 a0001c0005t0042 others(1): Show a0001c0001t0018 a0001c0002t0001 a0001c0005t0042 a0001c0006t0032	a0001c0001t0018g0072 a0001c0002t0001g0055 a0001c0005t0042g0037 others(1): Show a0001c0001t0018g0072 a0001c0002t0001g0055 a0001c0005t0042g0037 a0001c0006t0032g0005	4	76	0.0526	30	c.124 others(51): Show c.1240+23148_1240+23149insTTTTGTTTTGTTTTGTTTTGTTTT GTTTTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188893072	A A	ATATATAT others(23): Show ATATATATATATACATTATATATATATACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0015 a0003c0009t0015	a0003c0009t0015g0066 a0003c0009t0015g0066	1	76	0.0132	30	c.18 others(43): Show c.18593_*18594insTATATATATATACATTATATATATATACAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding		2402		chr3	TogoVar
LRBA_chr4_150259435_151020284	150420445	A A	ATATAATA others(23): Show ATATAATATATAAAGTATATATAATACACAT	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA20129.hp2 HG02965.hp1 NA20129.hp2	a0001 a0001	a0001c0007 a0001c0026 a0001c0007 a0001c0026	a0001c0007t0003 a0001c0026t0003 a0001c0007t0003 a0001c0026t0003	a0001c0007t0003g0165 a0001c0026t0003g0059 a0001c0007t0003g0165 a0001c0026t0003g0059	2	180	0.0111	30	c.704 others(49): Show c.7042-4885_7042-4856dupATGTGTATTATATATACTTTATATAT TATA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	46/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150648158	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02129.hp2 NA18941.hp2 HG02129.hp2 NA18941.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0012 a0001c0001 a0003c0012	a0001c0001t0001 a0003c0012t0003 a0001c0001t0001 a0003c0012t0003	a0001c0001t0001g0071 a0003c0012t0003g0078 a0001c0001t0001g0071 a0003c0012t0003g0078	2	180	0.0111	30	c.592 others(51): Show c.5921+35392_5921+35393insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658505	G G	GTCTCCCT others(23): Show GTCTCCCTCTCCCTCCCCCTCTCCCTCTCCC	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0001 a0005c0011t0001	a0005c0011t0001g0168 a0005c0011t0001g0168	1	180	0.0056	30	c.592 others(51): Show c.5921+25045_5921+25046insGGGAGAGGGAGAGGGGGAGGGAGA GGGAGA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150697325	G G	GAAAAAAA others(23): Show GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0005 a0005	a0005c0038 a0005c0038	a0005c0038t0001 a0005c0038t0001	a0005c0038t0001g0083 a0005c0038t0001g0083	1	180	0.0056	30	c.575 others(51): Show c.5755-13609_5755-13608insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150805446	G G	GGGAAAGG others(23): Show GGGAAAGGAAAGGAAAGGAAAGGAAAGGAAA	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0003 a0003	a0003c0035 a0003c0035	a0003c0035t0003 a0003c0035t0003	a0003c0035t0003g0154 a0003c0035t0003g0154	1	180	0.0056	30	c.551 others(47): Show c.5518+795_5518+824dupTTTCCTTTCCTTTCCTTTCCTTTCCTTT CC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	33/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	151008988	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0003 a0003	a0003c0042 a0003c0042	a0003c0042t0003 a0003c0042t0003	a0003c0042t0003g0180 a0003c0042t0003g0180	1	180	0.0056	30	c.216 others(47): Show c.216+5438_216+5439insATATATATATATTTTTTTTTTTTTTTTT TT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	2/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46558572	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00741.hp1 HG01175.hp2 others(6): Show HG00280.hp2 HG00741.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp2 HG01934.hp2 HG02280.hp1 HG06807.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0018 others(1): Show a0001c0001 a0001c0002 a0001c0018 a0001c0020	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0002t0011 a0001c0018t0029 a0001c0020t0003	a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(6): Show a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0002t0001g0112 a0001c0002t0001g0114 a0001c0002t0003g0116 a0001c0002t0011g0117 a0001c0018t0029g0113 a0001c0020t0003g0115	9	274	0.0329	30	c.307 others(47): Show c.307+4895_307+4896insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46560140	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01346.hp2 HG01981.hp1 others(6): Show HG01256.hp1 HG01346.hp2 HG01981.hp1 HG02148.hp1 HG03490.hp2 HG03704.hp1 NA18953.hp2 NA19009.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0016 a0001c0001t0001g0050 a0001c0001t0001g0065 others(6): Show a0001c0001t0001g0016 a0001c0001t0001g0050 a0001c0001t0001g0065 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0255 a0001c0001t0002g0063	9	274	0.0329	30	c.307 others(47): Show c.307+6446_307+6447insTATATATATATATATATATATATATATA TA	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02148.hp1 NA18953.hp2 others(1): Show HG02015.hp1 HG02148.hp1 NA18953.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0001 a0001c0001t0018	a0001c0001t0001g0018 a0001c0001t0001g0080 a0001c0001t0001g0085 others(1): Show a0001c0001t0001g0018 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0018g0026	4	274	0.0146	30	c.307 others(49): Show c.307+20164_307+20165insATATATATATATATATATATATATAT ATTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01517.hp1 HG01934.hp1 others(1): Show HG01175.hp1 HG01517.hp1 HG01934.hp1 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0011 a0001c0001t0001 a0001c0001t0002 a0001c0001t0011	a0001c0001t0001g0036 a0001c0001t0001g0069 a0001c0001t0002g0037 others(1): Show a0001c0001t0001g0036 a0001c0001t0001g0069 a0001c0001t0002g0037 a0001c0001t0011g0077	4	274	0.0146	30	c.307 others(49): Show c.307+20164_307+20165insATATATATATATATATATATATATAT TTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH1_chr13_46548170_46749898	46573866	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02602.hp2 HG01123.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0072 a0001c0001t0001g0076	2	274	0.0073	30	c.307 others(49): Show c.307+20164_307+20165insATATATATATATATATATATATATTT TTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH3_chr3_197786254_197893436	197792577	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01069.hp2 HG01167.hp2 others(21): Show HG00438.hp2 HG01069.hp2 HG01167.hp2 HG01361.hp1 HG01891.hp1 HG01928.hp1 HG01981.hp1 HG02293.hp1 HG02451.hp1 HG02683.hp2 HG02922.hp2 HG02976.hp2 HG03017.hp2 HG03130.hp2 HG03195.hp1 HG03492.hp1 HG03579.hp2 HG03654.hp1 HG03710.hp1 HG03942.hp1 HG03942.hp2 HG04204.hp2 NA18994.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0002c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(12): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 a0001c0001t0014 a0001c0001t0024 a0001c0001t0032 a0001c0001t0040 a0001c0001t0067 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0007t0006 a0002c0003t0002 a0002c0003t0013	a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0197 others(21): Show a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0004g0188 a0001c0001t0008g0077 a0001c0001t0011g0078 a0001c0001t0014g0195 a0001c0001t0024g0201 a0001c0001t0032g0204 a0001c0001t0040g0191 a0001c0001t0067g0192 a0001c0002t0001g0187 a0001c0002t0001g0200 a0001c0002t0004g0193 a0001c0002t0004g0194 a0001c0002t0005g0186 a0001c0002t0005g0202 a0001c0007t0006g0196 a0002c0003t0002g0079 a0002c0003t0013g0185	24	292	0.0822	30	c.262 others(47): Show c.262+1065_262+1066insTATATATATATATATATATATATATATA TA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197792599	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0291 a0001c0001t0001g0291	1	292	0.0034	30	c.262 others(47): Show c.262+1065_262+1066insTATATATATATATATATATATATGTATA TA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197869401	G G	GGTGCACT others(23): Show GGTGCACTGTACCTGCAGGAGGTAGAAAGCC	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0291 a0001c0001t0001g0291	1	292	0.0034	30	c.187 others(47): Show c.1874-729_1874-700dupCGTGCACTGTACCTGCAGGAGGTAGAAA GC	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	17/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197869671	C C	CATGCACT others(23): Show CATGCACTGTACCTGCAGGAGGTAGAAAGCG	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0112 a0002c0003t0002g0112	1	292	0.0034	30	c.187 others(47): Show c.1874-484_1874-483insCTGTACCTGCAGGAGGTAGAAAGCGATG CA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	17/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197869924	T T	TGCAGGAG others(23): Show TGCAGGAGGTAGAAAGCGATGCACTGTACCC	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0070 a0003c0010t0070	a0003c0010t0070g0049 a0003c0010t0070g0049	1	292	0.0034	30	c.187 others(47): Show c.1874-189_1874-160dupGATGCACTGTACCCGCAGGAGGTAGAAA GC	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	17/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH4_chr7_100569011_100591129	100574632	G G	GCGCGCAC others(23): Show GCGCGCACACACACACACACACACACACACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0028 a0001c0007t0028	a0001c0007t0028g0052 a0001c0007t0028g0052	1	370	0.0027	30	c.47 others(39): Show c.474_*475insTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding	18/18	474		chr7	TogoVar
LRCH4_chr7_100569011_100591129	100574632	G G	GCGCGCGC others(23): Show GCGCGCGCGCACACACACACACACACACACA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp2 HG03098.hp1 HG01169.hp2 HG03098.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0012 a0001c0004t0012	a0001c0004t0012g0082 a0001c0004t0012g0181 a0001c0004t0012g0082 a0001c0004t0012g0181	2	370	0.0054	30	c.47 others(39): Show c.474_*475insTGTGTGTGTGTGTGTGTGTGTGCGCGCGCG	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding	18/18	474		chr7	TogoVar
LRFN2_chr6_40386591_40592364	40575271	T T	TGTGCTCC others(23): Show TGTGCTCCTGGGAGCTAAGCCCAGCTCCGAG	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02132.hp2 HG02523.hp2 others(8): Show HG02083.hp1 HG02132.hp2 HG02523.hp2 HG03831.hp1 HG04228.hp1 NA18952.hp2 NA18962.hp2 NA18992.hp1 NA19070.hp2 NA19079.hp2 NA19087.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0003c0010 a0005c0014	a0001c0001t0001 a0001c0002t0001 a0001c0003t0002 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0002 a0001c0007t0003 a0003c0010t0001 a0005c0014t0001	a0001c0001t0001g0112 a0001c0001t0001g0160 a0001c0001t0001g0162 others(8): Show a0001c0001t0001g0112 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0002t0001g0003 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0003t0002g0164 a0001c0007t0003g0161 a0003c0010t0001g0027 a0005c0014t0001g0159	11	228	0.0483	30	c.-19 others(49): Show c.-19+11640_-19+11669dupCTCGGAGCTGGGCTTAGCTCCCAGGA GCAC	LRFN2	ENSG00000156564.10	transcript	ENST00000338305.7	protein_coding	1/2			chr6	TogoVar
LRFN5_chr14_41601876_41909549	41610661	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01070.hp2 HG02004.hp1 others(2): Show HG00140.hp2 HG01070.hp2 HG02004.hp1 HG03195.hp1 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0050 a0001c0002t0002g0020 a0001c0002t0002g0021 others(2): Show a0001c0001t0001g0050 a0001c0002t0002g0020 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0023	5	280	0.0179	30	c.-19 others(49): Show c.-197+2121_-197+2122insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41704448	C C	CTGTGTGT others(23): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0039 a0001c0002t0021g0039	1	280	0.0036	30	c.-19 others(51): Show c.-196-62393_-196-62392insGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41734316	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01099.hp1 HG01106.hp1 others(17): Show HG00673.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01255.hp1 HG01891.hp1 HG01952.hp1 HG02015.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG03098.hp2 HG03710.hp1 NA18949.hp1 NA18960.hp2 NA18971.hp2 NA18998.hp2 NA19006.hp1 NA19056.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0027 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0027 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006	a0001c0001t0001g0005 a0001c0001t0001g0044 a0001c0001t0001g0061 others(17): Show a0001c0001t0001g0005 a0001c0001t0001g0044 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0121 a0001c0001t0001g0130 a0001c0001t0001g0147 a0001c0001t0001g0158 a0001c0001t0001g0165 a0001c0001t0001g0183 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0075 a0001c0001t0027g0043 a0001c0002t0001g0222 a0001c0002t0002g0051 a0001c0002t0002g0078 a0001c0002t0006g0274	20	280	0.0714	30	c.-19 others(51): Show c.-196-32509_-196-32508insATATATATATATATATATATATAT ATATAT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41734344	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG03225.hp1 NA18954.hp1 others(2): Show HG00673.hp1 HG03225.hp1 NA18954.hp1 NA18995.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0109 a0001c0002t0003g0251 a0001c0002t0003g0256 others(2): Show a0001c0001t0001g0109 a0001c0002t0003g0251 a0001c0002t0003g0256 a0001c0002t0003g0257 a0001c0002t0003g0260	5	280	0.0179	30	c.-19 others(51): Show c.-196-32509_-196-32508insATATATATATATATATATATATAT ATATTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(23): Show ATTATTATTATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18998.hp1 NA18984.hp2 NA18998.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0245 a0001c0002t0003g0247 a0001c0002t0003g0245 a0001c0002t0003g0247	2	280	0.0071	30	c.-20 others(49): Show c.-20-29929_-20-29928insATTATTATTTTTTTTTTTTTTTTTTT TTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(23): Show ATTATTATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0240 a0001c0002t0003g0240	1	280	0.0036	30	c.-20 others(49): Show c.-20-29929_-20-29928insATTATTTTTTTTTTTTTTTTTTTTTT TTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRGUK_chr7_134122340_134269595	134263403	C C	CTGTGTGT others(23): Show CTGTGTGTGTGTGTGTGTCTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01123.hp2 HG02451.hp1 others(3): Show HG00323.hp2 HG01123.hp2 HG02451.hp1 HG03579.hp1 NA18957.hp2 NA20752.hp2	a0001 a0003 a0012 a0001 a0003 a0012	a0001c0001 a0003c0004 a0012c0015 a0001c0001 a0003c0004 a0012c0015	a0001c0001t0002 a0003c0004t0002 a0012c0015t0002 a0001c0001t0002 a0003c0004t0002 a0012c0015t0002	a0001c0001t0002g0031 a0001c0001t0002g0145 a0001c0001t0002g0146 others(3): Show a0001c0001t0002g0031 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0003c0004t0002g0097 a0012c0015t0002g0022	6	220	0.0273	30	c.234 others(47): Show c.2348-427_2348-426insGTCTGTGTGTGTGTGTGTGTGTGTGTGT GT	LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRIF1_chr1_110942190_110968922	110957470	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02698.hp1 NA18947.hp2 others(1): Show HG02523.hp1 HG02698.hp1 NA18947.hp2 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0025 a0001c0001t0004g0211 a0001c0001t0004g0025 a0001c0001t0004g0211	4	446	0.0090	30	c.69- others(45): Show c.69-4656_69-4655insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRIF1	ENSG00000121931.16	transcript	ENST00000369763.5	protein_coding	1/3			chr1	TogoVar
LRIG1_chr3_66373797_66506022	66408913	A A	AGTGTGTG others(23): Show AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18943.hp2 NA18943.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0048 a0002c0001t0001g0048	1	264	0.0038	30	c.935 others(47): Show c.935+1186_935+1215dupACACACACACACACACACACACACACAC AC	LRIG1	ENSG00000144749.14	transcript	ENST00000273261.8	protein_coding	7/18			chr3	TogoVar
LRIT3_chr4_109843107_109877315	109850414	C C	CTTCCTTC others(23): Show CTTCCTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0296 a0002c0001t0003g0296	1	332	0.0030	30	c.117 others(47): Show c.117-1090_117-1089insTTCCTTCTTTCTTTCTTTCTTTCTTTCT TT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCTTC others(23): Show CCTTCTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0239 a0002c0001t0003g0239	1	332	0.0030	30	c.117 others(47): Show c.117-1079_117-1078insCTTCTTTCTTTCTTTCTTTCTTTCTTTC TT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRMDA_chr10_75426624_76565168	75608129	T T	TATATATA others(23): Show TATATATATATATATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0028 a0003c0004t0003g0028	1	46	0.0217	30	c.131 others(51): Show c.131+169636_131+169637insTATATATATATATATATATACACA CACACA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	75672524	T T	TCCTTTCC others(23): Show TCCTTTCCTCCCCTCCCCTCCCCTCCCCTCC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00642.hp1 HG02083.hp2 others(2): Show HG00639.hp2 HG00642.hp1 HG02083.hp2 HG03139.hp2 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001 a0002c0003t0017	a0001c0001t0002g0035 a0001c0001t0004g0011 a0001c0001t0006g0005 others(2): Show a0001c0001t0002g0035 a0001c0001t0004g0011 a0001c0001t0006g0005 a0001c0002t0001g0017 a0002c0003t0017g0042	5	46	0.1087	30	c.131 others(51): Show c.131+234033_131+234034insTTCCTCCCCTCCCCTCCCCTCCCC TCCCCT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254340	C C	CATACCAT others(23): Show CATACCATACCATACCATACCATCCTATCCT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG03486.hp2 NA19240.hp2 HG00642.hp1 HG03486.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0005 a0001c0001t0002 a0001c0002t0001 a0001c0002t0005	a0001c0001t0002g0035 a0001c0002t0001g0044 a0001c0002t0005g0032 a0001c0001t0002g0035 a0001c0002t0001g0044 a0001c0002t0005g0032	3	46	0.0652	30	c.517 others(49): Show c.517-70059_517-70058insACCATACCATACCATACCATCCTATC CTAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76365107	T T	TATATATA others(23): Show TATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0015 a0001c0001t0018g0015	1	46	0.0217	30	c.601 others(49): Show c.601+40623_601+40624insTATATATATATATATATATATATATA CACA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859377	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG03130.hp1 HG02083.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0267 a0001c0001t0001g0255 a0001c0001t0001g0267	2	334	0.0060	30	c.613 others(47): Show c.613+4030_613+4031insATATATATATATATATATATATATATAT AT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02922.hp1 homoSapiens_chm13v2.hp1 HG02071.hp2 HG02922.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0164 a0001c0001t0001g0306 a0001c0001t0002g0301 a0001c0001t0001g0164 a0001c0001t0001g0306 a0001c0001t0002g0301	3	334	0.0090	30	c.613 others(47): Show c.613+4011_613+4012insAAAATATATATATATATATATATATATA TA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP1B_chr2_140226423_142136016	140285115	G G	GTGTGTGT others(23): Show GTGTGTGTATATATATGTGTGTGTATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0009 a0001c0015t0009	a0001c0015t0009g0017 a0001c0015t0009g0017	1	28	0.0357	30	c.129 others(53): Show c.12968-10518_12968-10517insTATATATACACACACATATATA TACACACA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	84/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140766859	T T	TATATATA others(23): Show TATATATATATATATATATTATATATATATA	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0007 a0001c0020t0007	a0001c0020t0007g0019 a0001c0020t0007g0019	1	28	0.0357	30	c.575 others(49): Show c.5758+2353_5758+2354insTATATATATATAATATATATATATAT ATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	35/90			chr2	TogoVar

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