Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LMTK2_chr7_98101862_98214638	98140119	T T	TTTCCTTC others(41): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA18943.hp1 HG02809.hp1 NA18943.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0005 a0004c0004t0039 a0001c0001t0005 a0004c0004t0039	a0001c0001t0005g0205 a0004c0004t0039g0370 a0001c0001t0005g0205 a0004c0004t0039g0370	2	390	0.0051	48	c.232 others(65): Show c.232-1275_232-1274insCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTC		LMTK2	ENSG00000164715.6	transcript	ENST00000297293.6	protein_coding	2/13					INFO_REALIGN_3_PRIME	chr7	TogoVar
LMTK2_chr7_98101862_98214638	98140123	T T	TTTCCTTC others(41): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02132.hp2 HG03139.hp2 others(2): Show HG01884.hp2 HG02132.hp2 HG03139.hp2 HG03225.hp2 NA18973.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0004c0004 a0001c0001 a0001c0005 a0004c0004	a0001c0001t0067 a0001c0005t0005 a0001c0005t0037 others(2): Show a0001c0001t0067 a0001c0005t0005 a0001c0005t0037 a0004c0004t0005 a0004c0004t0006	a0001c0001t0067g0196 a0001c0005t0005g0194 a0001c0005t0037g0199 others(2): Show a0001c0001t0067g0196 a0001c0005t0005g0194 a0001c0005t0037g0199 a0004c0004t0005g0351 a0004c0004t0006g0342	5	390	0.0128	48	c.232 others(65): Show c.232-1271_232-1270insCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTC		LMTK2	ENSG00000164715.6	transcript	ENST00000297293.6	protein_coding	2/13					INFO_REALIGN_3_PRIME	chr7	TogoVar
LMTK2_chr7_98101862_98214638	98140127	T T	TTTCCTTC others(41): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00642.hp1 HG02622.hp2 others(2): Show HG00597.hp1 HG00642.hp1 HG02622.hp2 HG02965.hp1 NA18947.hp2	a0001 a0004 a0001 a0004	a0001c0005 a0004c0004 a0001c0005 a0004c0004	a0001c0005t0005 a0004c0004t0005 a0004c0004t0006 a0001c0005t0005 a0004c0004t0005 a0004c0004t0006	a0001c0005t0005g0200 a0001c0005t0005g0201 a0004c0004t0005g0353 others(2): Show a0001c0005t0005g0200 a0001c0005t0005g0201 a0004c0004t0005g0353 a0004c0004t0006g0357 a0004c0004t0006g0358	5	390	0.0128	48	c.232 others(65): Show c.232-1267_232-1266insCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTC		LMTK2	ENSG00000164715.6	transcript	ENST00000297293.6	protein_coding	2/13					INFO_REALIGN_3_PRIME	chr7	TogoVar
LMTK2_chr7_98101862_98214638	98140139	T T	TGTCTGTC others(41): Show TGTCTGTCTGTCCGTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0225 a0001c0001t0002g0225	1	390	0.0026	48	c.232 others(65): Show c.232-1258_232-1257insGTCTGTCTGTCCGTCCTTCCTTCCTTCC TTCCTTCCTTCCTTCCTTCC		LMTK2	ENSG00000164715.6	transcript	ENST00000297293.6	protein_coding	2/13						chr7	TogoVar
LNX2_chr13_27540913_27625529	27583255	T T	TGTGTGTG others(41): Show TGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0096 a0002c0002t0001g0096	1	358	0.0028	48	c.-10 others(67): Show c.-100-1453_-100-1452insGCGCGCGCGCGCGCGCGCGCGCGCGC GCGCGCGCACACACACACACAC		LNX2	ENSG00000139517.9	transcript	ENST00000316334.5	protein_coding	1/9						chr13	TogoVar
LOC112267897_chr13_63741741_63753176	63746826	C C	CCTGTGGC others(41): Show CCTGTGGCTATGGCTCCAGCTATGGCTGTGGCTATGGCTCTGGTTATGG	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG02896.hp1 HG02897.hp2 HG02976.hp2 others(3): Show HG02896.hp1 HG02897.hp2 HG02976.hp2 HG03041.hp1 HG03471.hp2 NA19030.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0009 a0006c0006t0009	a0006c0006t0009g0000 a0006c0006t0009g0000	6	426	0.0141	48	c.29_ others(53): Show c.29_76dupGTGGCTATGGCTCCAGCTATGGCTGTGGCTATGGCTCTGG TTATGGCT	p.Cys others(11): Show p.Cys10_Gly25dup	LOC112267897	ENSG00000237378.3	transcript	ENST00000611641.1	protein_coding	1/1	137/1436	77/390	26/129		INFO_REALIGN_3_PRIME	chr13	TogoVar
LOC122539214_chr19_52645447_52695496	52687366	A A	AATTTATA others(41): Show AATTTATATAGCTATATAAATTATAATATAAATTATAATTTATATAGCT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01884.hp2 others(9): Show HG01070.hp1 HG01071.hp2 HG01884.hp2 HG01891.hp1 HG01981.hp2 HG02145.hp1 HG02280.hp2 HG02809.hp1 HG02818.hp1 HG02965.hp1 HG03130.hp1 NA20129.hp2	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0017	a0001c0001 a0004c0004 a0005c0005 others(1): Show a0001c0001 a0004c0004 a0005c0005 a0017c0013	a0001c0001t0008 a0001c0001t0009 a0001c0001t0032 others(5): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0032 a0001c0001t0043 a0001c0001t0044 a0004c0004t0020 a0005c0005t0007 a0017c0013t0010	a0001c0001t0008g0057 a0001c0001t0009g0004 a0001c0001t0009g0062 others(8): Show a0001c0001t0008g0057 a0001c0001t0009g0004 a0001c0001t0009g0062 a0001c0001t0032g0242 a0001c0001t0043g0436 a0001c0001t0044g0435 a0004c0004t0020g0433 a0004c0004t0020g0434 a0005c0005t0007g0055 a0005c0005t0007g0056 a0017c0013t0010g0063	12	452	0.0266	48	c.-20 others(65): Show c.-20+3076_-20+3077insAGCTATATAAATTATAATTTATATTATA ATTTATATAGCTATATAAAT		LOC122539214	ENSG00000269825.3	transcript	ENST00000598322.3	protein_coding	1/3						chr19	TogoVar
LOC128125818_chr4_6059977_6075162	6067579	G G	GCACTCAA others(41): Show GCACTCAAGCTCTTCTGCACACACAGGTCACCCCCCTGAGCTCCAGGTT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01346.hp1 HG02738.hp2 others(3): Show HG01099.hp2 HG01346.hp1 HG02738.hp2 HG03490.hp2 HG03492.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0040 a0001c0001t0000g0077 a0001c0001t0000g0078 others(2): Show a0001c0001t0000g0040 a0001c0001t0000g0077 a0001c0001t0000g0078 a0001c0001t0000g0162 a0001c0001t0000g0230	6	462	0.0130	48	c.106 others(65): Show c.106+2430_106+2477dupAACCTGGAGCTCAGGGGGGTGACCTGTG TGTGCAGAAGAGCTTGAGTG		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC128125818_chr4_6059977_6075162	6067594	T T	TGCACACA others(41): Show TGCACACACAGGTCACCCCCCTGAGCTCCAGGTTCACTCAAGCTCTTCC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0216 a0001c0001t0000g0216	1	462	0.0022	48	c.106 others(65): Show c.106+2462_106+2463insGGAAGAGCTTGAGTGAACCTGGAGCTCA GGGGGGTGACCTGTGTGTGC		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC128125818_chr4_6059977_6075162	6067662	A A	ACCCCCTG others(41): Show ACCCCCTGAGCTCCAGGTTCACTCAAGCTCTTCTGCACACACAGGTCAC	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA21309.hp2 NA19066.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0125 a0001c0001t0000g0160 a0001c0001t0000g0125 a0001c0001t0000g0160	2	462	0.0043	48	c.106 others(65): Show c.106+2347_106+2394dupGTGACCTGTGTGTGCAGAAGAGCTTGAG TGAACCTGGAGCTCAGGGGG		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC128125818_chr4_6059977_6075162	6067702	A A	ACAGGTCA others(41): Show ACAGGTCACCCCCCTGAGCTCCACGTTCACTCAAGCTCTTCTGCACACG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0158 a0001c0001t0000g0158	1	462	0.0022	48	c.106 others(65): Show c.106+2307_106+2354dupCGTGTGCAGAAGAGCTTGAGTGAACGTG GAGCTCAGGGGGGTGACCTG		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC128125818_chr4_6059977_6075162	6067750	G G	GCAGGTCA others(41): Show GCAGGTCACCCCCCTGAGCTCCACGTTCACTCAAGCTCTTCTGCACACA	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0209 a0001c0001t0000g0209	1	462	0.0022	48	c.106 others(65): Show c.106+2306_106+2307insTGTGTGCAGAAGAGCTTGAGTGAACGTG GAGCTCAGGGGGGTGACCTG		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC128125818_chr4_6059977_6075162	6067827	C C	CTCAAGCT others(41): Show CTCAAGCTCTTCTGCACACGCAGGTCACCCCCCTGAGCTCCACGTTCAG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02055.hp1 HG02145.hp2 others(10): Show HG01109.hp2 HG02055.hp1 HG02145.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp2 HG03098.hp1 NA18522.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0026 a0001c0001t0000g0039 a0001c0001t0000g0050 others(6): Show a0001c0001t0000g0026 a0001c0001t0000g0039 a0001c0001t0000g0050 a0001c0001t0000g0055 a0001c0001t0000g0101 a0001c0001t0000g0102 a0001c0001t0000g0125 a0001c0001t0000g0126 a0001c0001t0000g0127	13	462	0.0281	48	c.106 others(65): Show c.106+2229_106+2230insCTGAACGTGGAGCTCAGGGGGGTGACCT GCGTGTGCAGAAGAGCTTGA		LOC128125818	ENSG00000284684.1	transcript	ENST00000636216.1	protein_coding	1/1						chr4	TogoVar
LOC647264_chr13_63827361_63838053	63832829	G G	GCCAGAGC others(41): Show GCCAGAGCCATAGCCACAGCCATAGCTGGAGCCATAGCCACAGCCATAA	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG02630.hp2 HG02970.hp1 HG03041.hp1 others(2): Show HG02630.hp2 HG02970.hp1 HG03041.hp1 HG06807.hp1 NA19240.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0000 a0004c0005t0005g0000	5	442	0.0113	48	c.117 others(55): Show c.117_164dupTTATGGCTGTGGCTATGGCTCCAGCTATGGCTGTGGCT ATGGCTCTGG	p.Gly others(59): Show p.Gly55_Tyr56insTyrGlyCysGlyTyrGlySerSerTyrGlyCysG lyTyrGlySerGly	LOC647264	ENSG00000285566.2	transcript	ENST00000648713.2	protein_coding	1/1	224/693	164/330	55/109			chr13	TogoVar
LOC729966_chr19_18245034_18260362	18251681	C C	CCCCCCGC others(41): Show CCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCG	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18940.hp1 NA18612.hp2 NA18940.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0074 a0003c0003t0001g0075 a0003c0003t0001g0074 a0003c0003t0001g0075	2	454	0.0044	48	c.496 others(63): Show c.496+382_496+383insCGGGGGCGGGGGCGGGGGCGGGGGCGGGGG CGGGGGCGGGGGCGGGGG		LOC729966	ENSG00000284797.2	transcript	ENST00000643046.2	protein_coding	2/3						chr19	TogoVar
LOXHD1_chr18_46472273_46662220	46608035	G G	GGGAAGGA others(41): Show GGGAAGGAAGGAAGGAAGGAAACAAGGAAGGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG04204.hp1 NA20300.hp2 HG03041.hp1 HG04204.hp1 NA20300.hp2	a0002 a0012 a0031 a0002 a0012 a0031	a0002c0013 a0012c0010 a0031c0047 a0002c0013 a0012c0010 a0031c0047	a0002c0013t0001 a0012c0010t0001 a0031c0047t0001 a0002c0013t0001 a0012c0010t0001 a0031c0047t0001	a0002c0013t0001g0156 a0012c0010t0001g0158 a0031c0047t0001g0142 a0002c0013t0001g0156 a0012c0010t0001g0158 a0031c0047t0001g0142	3	270	0.0111	48	c.759 others(65): Show c.759+2740_759+2741insTTCCTTCCTTCCTTCCTTCCTTCCTTGT TTCCTTCCTTCCTTCCTTCC		LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	6/40						chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46608035	G G	GGGAAGGA others(41): Show GGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	270	0.0037	48	c.759 others(65): Show c.759+2740_759+2741insTTCCTTCCTTCCTTCCTTCCTTCCTTCC TTCCTTCCTTCCTTCCTTCC		LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	6/40						chr18	TogoVar
LPIN2_chr18_2911999_3018144	2956311	G G	GGTGTGTG others(41): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0019 a0001c0001t0018g0019	1	380	0.0026	48	c.193 others(65): Show c.193-1713_193-1712insACACACACACACACACACACACACACAC ACACACACACACACACACAC		LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19						chr18	TogoVar
LPP_chr3_188149157_188895671	188843786	C C	CAAAAAAA others(41): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0004 a0004	a0004c0017 a0004c0017	a0004c0017t0044 a0004c0017t0044	a0004c0017t0044g0043 a0004c0017t0044g0043	1	76	0.0132	48	c.141 others(69): Show c.1411-22402_1411-22401insAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150489239	C C	CGAATATA others(41): Show CGAATATATAATATATTATATATAAGAATATATAATATATTATATATAA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03130.hp2 HG02818.hp1 HG03130.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0001 a0002c0002t0003	a0002c0002t0001g0134 a0002c0002t0003g0125 a0002c0002t0001g0134 a0002c0002t0003g0125	2	180	0.0111	48	c.644 others(67): Show c.6449-1453_6449-1406dupTTATATATAATATATTATATATTCTT ATATATAATATATTATATATTC		LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56						chr4	TogoVar
LRBA_chr4_150259435_151020284	150489465	A A	AAATATAT others(41): Show AAATATATTATATATAAGAATATATAATATATTATATATAAGAATATAT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	180	0.0056	48	c.644 others(67): Show c.6448+1405_6448+1452dupATATATTCTTATATATAATATATTAT ATATTCTTATATATAATATATT		LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56						chr4	TogoVar
LRBA_chr4_150259435_151020284	150658505	G G	GTCTCCCT others(41): Show GTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02622.hp2 NA19030.hp2 others(2): Show HG00544.hp1 HG02622.hp2 NA19030.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0037 a0002c0003 others(2): Show a0001c0001 a0001c0037 a0002c0003 a0002c0015 a0005c0011	a0001c0001t0007 a0001c0037t0003 a0002c0003t0002 others(2): Show a0001c0001t0007 a0001c0037t0003 a0002c0003t0002 a0002c0015t0003 a0005c0011t0001	a0001c0001t0007g0050 a0001c0037t0003g0175 a0002c0003t0002g0146 others(2): Show a0001c0001t0007g0050 a0001c0037t0003g0175 a0002c0003t0002g0146 a0002c0015t0003g0061 a0005c0011t0001g0169	5	180	0.0278	48	c.592 others(69): Show c.5921+24998_5921+25045dupGGGAGAGGGAGAGGGAGAGGGAGA GGGAGAGGGAGAGGGAGAGGGAGA		LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56						chr4	TogoVar
LRBA_chr4_150259435_151020284	150694462	C C	CAAAAAAA others(41): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 NA18952.hp2 HG02622.hp1 NA18952.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0002 a0001c0013t0003 a0001c0001t0002 a0001c0013t0003	a0001c0001t0002g0110 a0001c0013t0003g0096 a0001c0001t0002g0110 a0001c0013t0003g0096	2	180	0.0111	48	c.575 others(69): Show c.5755-10746_5755-10745insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTT		LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	36/56						chr4	TogoVar
LRCH3_chr3_197786254_197893436	197817360	G G	GTGTGTGT others(41): Show GTGTGTGTGTCTGTGTGTGTGTGTGTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0060 a0004c0010t0060	a0004c0010t0060g0034 a0004c0010t0060g0034	1	292	0.0034	48	c.534 others(61): Show c.534+59_534+60insGTGTGTGTCTGTGTGTGTGTGTGTGTATATAT ATATATATATATATAT		LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	3/20					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197817360	G G	GTGTGTGT others(41): Show GTGTGTGTGTCTGTGTGTGTGTGTGTGTGTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01109.hp1 HG01167.hp1 others(14): Show HG00423.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01358.hp2 HG01928.hp2 HG01981.hp2 HG02132.hp1 HG02148.hp2 HG02293.hp1 HG02523.hp2 HG02683.hp2 HG02922.hp2 HG03017.hp2 NA18954.hp1 NA18954.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0067 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0067 a0001c0002t0001 a0001c0002t0012 a0001c0002t0052	a0001c0001t0001g0144 a0001c0001t0001g0197 a0001c0001t0001g0205 others(14): Show a0001c0001t0001g0144 a0001c0001t0001g0197 a0001c0001t0001g0205 a0001c0001t0001g0227 a0001c0001t0001g0237 a0001c0001t0002g0229 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0067g0192 a0001c0002t0001g0117 a0001c0002t0001g0140 a0001c0002t0001g0171 a0001c0002t0001g0174 a0001c0002t0001g0187 a0001c0002t0001g0254 a0001c0002t0012g0030 a0001c0002t0052g0221	17	292	0.0582	48	c.534 others(61): Show c.534+59_534+60insGTGTGTGTCTGTGTGTGTGTGTGTGTGTATAT ATATATATATATATAT		LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	3/20					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197817360	G G	GTGTGTGT others(41): Show GTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	292	0.0034	48	c.534 others(61): Show c.534+59_534+60insGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTAT ATATATATATATATAT		LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	3/20					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197817360	G G	GTGTGTGT others(41): Show GTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02976.hp1 HG02738.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0004 a0001c0001t0008	a0001c0001t0004g0211 a0001c0001t0008g0084 a0001c0001t0004g0211 a0001c0001t0008g0084	2	292	0.0069	48	c.534 others(61): Show c.534+59_534+60insGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGT ATATATATATATATAT		LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	3/20					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197887683	G G	GGGGGCTG others(41): Show GGGGGCTGAGAGCCCCCCAGCAGAGCCCTTCCCATCACTGACAGTGTCT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18990.hp1 NA19000.hp1 NA18990.hp1 NA19000.hp1	a0001 a0001	a0001c0002 a0001c0008 a0001c0002 a0001c0008	a0001c0002t0042 a0001c0008t0041 a0001c0002t0042 a0001c0008t0041	a0001c0002t0042g0088 a0001c0008t0041g0107 a0001c0002t0042g0088 a0001c0008t0041g0107	2	292	0.0069	48	c.40 others(59): Show c.4083_*4130dupAGCAGAGCCCTTCCCATCACTGACAGTGTCTGGG GCTGAGAGCCCCCC		LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	21/21				4131	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRFN5_chr14_41601876_41909549	41734344	A A	ATATATAT others(41): Show ATATATATATATATATATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0231 a0001c0002t0003g0231	1	280	0.0036	48	c.-19 others(69): Show c.-196-32509_-196-32508insATATATATATATATATATATATAT ATATATATATATATATATATATTT		LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr14	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CTTTCTTT others(41): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTT	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0064 a0001c0002t0003g0064	1	332	0.0030	48	c.117 others(65): Show c.117-1082_117-1081insTTTCTTTCTTTCTTTCTTTCTTTCTTTC TTTCTTTCTTTCTTTCTTTT		LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3						chr4	TogoVar
LRP12_chr8_104484236_104594258	104547754	A A	AATATATA others(41): Show AATATATAATTCTATATTATATTTTGTATATAATATATAATTATATATT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0292 a0001c0001t0007g0292	1	318	0.0031	48	c.80- others(65): Show c.80-15839_80-15792dupAATATATAATTATATATTATATACAAAA TATAATATAGAATTATATAT		LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/6						chr8	TogoVar
LRP1B_chr2_140226423_142136016	140228261	C C	CATATATA others(41): Show CATATATAAATATATATATATTCCATATATAAATATATATATATTCCAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0003 a0003	a0003c0021 a0003c0021	a0003c0021t0001 a0003c0021t0001	a0003c0021t0001g0026 a0003c0021t0001g0026	1	28	0.0357	48	c.49 others(59): Show c.4924_*4925insATGGAATATATATATATTTATATATGGAATATAT ATATATTTATATAT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding					3161		chr2	TogoVar
LRP1B_chr2_140226423_142136016	140613352	A A	ATTATATA others(41): Show ATTATATACATATAAATATATATATAATTATATACATATAAATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03516.hp1 HG02723.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0028 a0001c0001 a0001c0028	a0001c0001t0006 a0001c0028t0002 a0001c0001t0006 a0001c0028t0002	a0001c0001t0006g0024 a0001c0028t0002g0020 a0001c0001t0006g0024 a0001c0028t0002g0020	2	28	0.0714	48	c.680 others(69): Show c.6800-11714_6800-11713insATATATATTTATATGTATATAATT ATATATATATTTATATGTATATAA		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	41/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	141464606	A A	ATATATAT others(41): Show ATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0022 a0001c0002t0010g0022	1	28	0.0357	48	c.343 others(67): Show c.343+15789_343+15790insAAAAAAAAAAAAAAAAAAAATATATA TATATATATATATATATATATA		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90						chr2	TogoVar
LRP2_chr2_169122109_169367534	169327875	A A	AGGGAGGT others(41): Show AGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGACGCCCCGTCCGGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG01257.hp1 others(16): Show HG00280.hp1 HG00544.hp1 HG01257.hp1 HG02055.hp1 HG02055.hp2 HG02080.hp2 HG02145.hp1 HG02148.hp1 HG02280.hp1 HG02559.hp1 HG02895.hp1 HG03098.hp1 HG03139.hp2 NA18522.hp1 NA18906.hp1 NA18953.hp2 NA19043.hp2 NA19074.hp2 NA19079.hp1	a0001 a0003 a0004 others(6): Show a0001 a0003 a0004 a0009 a0016 a0017 a0038 a0040 a0070	a0001c0002 a0001c0018 a0001c0049 others(15): Show a0001c0002 a0001c0018 a0001c0049 a0003c0016 a0003c0019 a0003c0058 a0003c0061 a0003c0063 a0003c0098 a0004c0007 a0009c0052 a0009c0076 a0016c0037 a0016c0178 a0017c0096 a0038c0080 a0040c0086 a0070c0177	a0001c0002t0001 a0001c0018t0001 a0001c0049t0001 others(15): Show a0001c0002t0001 a0001c0018t0001 a0001c0049t0001 a0003c0016t0004 a0003c0019t0007 a0003c0058t0019 a0003c0061t0001 a0003c0063t0009 a0003c0098t0002 a0004c0007t0002 a0009c0052t0001 a0009c0076t0003 a0016c0037t0001 a0016c0178t0001 a0017c0096t0001 a0038c0080t0009 a0040c0086t0005 a0070c0177t0001	a0001c0002t0001g0019 a0001c0018t0001g0208 a0001c0049t0001g0207 others(16): Show a0001c0002t0001g0019 a0001c0018t0001g0208 a0001c0049t0001g0207 a0003c0016t0004g0126 a0003c0019t0007g0018 a0003c0058t0019g0210 a0003c0061t0001g0205 a0003c0063t0009g0204 a0003c0098t0002g0136 a0004c0007t0002g0025 a0009c0052t0001g0216 a0009c0076t0003g0211 a0016c0037t0001g0094 a0016c0037t0001g0115 a0016c0178t0001g0088 a0017c0096t0001g0031 a0038c0080t0009g0206 a0040c0086t0005g0148 a0070c0177t0001g0087	19	250	0.0760	48	c.80- others(63): Show c.80-6992_80-6991insCCCGGACGGGGCGTCTGGCCGGGTGGGGGG CTGACCCCCCCACCTCCC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169327875	A A	AGGGAGGT others(41): Show AGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGACGCCCCGTCCGGG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00733.hp2 others(45): Show HG00099.hp1 HG00323.hp2 HG00733.hp2 HG00738.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01257.hp2 HG01258.hp1 HG01361.hp2 HG02145.hp2 HG02257.hp1 HG02280.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02723.hp2 HG02735.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03704.hp1 HG03942.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18941.hp2 NA18961.hp1 NA18968.hp1 NA18979.hp1 NA18982.hp1 NA19060.hp2 NA19240.hp1 NA20129.hp2	a0001 a0002 a0003 others(26): Show a0001 a0002 a0003 a0005 a0007 a0008 a0012 a0013 a0018 a0020 a0022 a0023 a0024 a0025 a0026 a0032 a0036 a0042 a0044 a0045 a0048 a0050 a0054 a0056 a0057 a0058 a0059 a0067 a0069	a0001c0017 a0001c0039 a0002c0036 others(40): Show a0001c0017 a0001c0039 a0002c0036 a0002c0130 a0002c0132 a0002c0162 a0002c0166 a0002c0167 a0003c0056 a0005c0014 a0005c0031 a0005c0131 a0005c0160 a0007c0015 a0007c0032 a0007c0127 a0008c0044 a0008c0065 a0012c0101 a0013c0169 a0018c0025 a0020c0083 a0022c0040 a0022c0085 a0023c0125 a0024c0139 a0025c0147 a0026c0157 a0026c0158 a0032c0038 a0036c0045 a0042c0084 a0044c0168 a0045c0150 a0048c0140 a0050c0165 a0054c0138 a0056c0154 a0057c0118 a0058c0128 a0059c0156 a0067c0123 a0069c0114	a0001c0017t0001 a0001c0039t0001 a0002c0036t0001 others(42): Show a0001c0017t0001 a0001c0039t0001 a0002c0036t0001 a0002c0130t0003 a0002c0132t0003 a0002c0162t0003 a0002c0166t0014 a0002c0167t0006 a0003c0056t0008 a0005c0014t0001 a0005c0014t0009 a0005c0031t0002 a0005c0131t0003 a0005c0160t0008 a0007c0015t0001 a0007c0015t0002 a0007c0032t0008 a0007c0127t0001 a0008c0044t0003 a0008c0065t0002 a0012c0101t0004 a0013c0169t0004 a0018c0025t0010 a0020c0083t0007 a0022c0040t0003 a0022c0085t0001 a0023c0125t0001 a0024c0139t0003 a0025c0147t0002 a0026c0157t0002 a0026c0158t0002 a0032c0038t0017 a0036c0045t0007 a0042c0084t0005 a0044c0168t0006 a0045c0150t0001 a0048c0140t0004 a0050c0165t0009 a0054c0138t0006 a0056c0154t0006 a0057c0118t0003 a0058c0128t0002 a0059c0156t0006 a0067c0123t0009 a0069c0114t0006	a0001c0017t0001g0021 a0001c0017t0001g0022 a0001c0039t0001g0020 others(45): Show a0001c0017t0001g0021 a0001c0017t0001g0022 a0001c0039t0001g0020 a0002c0036t0001g0111 a0002c0036t0001g0118 a0002c0130t0003g0177 a0002c0132t0003g0176 a0002c0162t0003g0036 a0002c0166t0014g0112 a0002c0167t0006g0119 a0003c0056t0008g0068 a0005c0014t0001g0027 a0005c0014t0009g0028 a0005c0031t0002g0029 a0005c0031t0002g0032 a0005c0131t0003g0157 a0005c0160t0008g0169 a0007c0015t0001g0057 a0007c0015t0002g0186 a0007c0032t0008g0082 a0007c0127t0001g0178 a0008c0044t0003g0151 a0008c0065t0002g0149 a0012c0101t0004g0013 a0013c0169t0004g0049 a0018c0025t0010g0004 a0020c0083t0007g0154 a0022c0040t0003g0127 a0022c0085t0001g0092 a0023c0125t0001g0034 a0024c0139t0003g0015 a0025c0147t0002g0065 a0026c0157t0002g0162 a0026c0158t0002g0056 a0032c0038t0017g0023 a0036c0045t0007g0077 a0042c0084t0005g0081 a0044c0168t0006g0152 a0045c0150t0001g0124 a0048c0140t0004g0066 a0050c0165t0009g0046 a0054c0138t0006g0014 a0056c0154t0006g0146 a0057c0118t0003g0142 a0058c0128t0002g0159 a0059c0156t0006g0155 a0067c0123t0009g0078 a0069c0114t0006g0037	48	250	0.1920	48	c.80- others(63): Show c.80-6992_80-6991insCCCGGACGGGGCGTCTGGCCGGGCGGGGGG CTGACCCCCCCACCTCCC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78						chr2	TogoVar
LRP8_chr1_53237364_53333070	53283498	T T	TACTTACT others(41): Show TACTTACTACATACCCGGGCCACTTACTTACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG02922.hp2 NA19064.hp2 HG02922.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0267 a0001c0001t0005g0138 a0001c0001t0001g0267 a0001c0001t0005g0138	2	296	0.0068	48	c.368 others(65): Show c.368-2784_368-2783insGGCCCGGGTATGTAGTAAGTAAGTAAGT GGCCCGGGTATGTAGTAAGT		LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18						chr1	TogoVar
LRP8_chr1_53237364_53333070	53283498	T T	TACTTACT others(41): Show TACTTACTTACTACATACCCGGGCCACTTACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00642.hp1 HG00735.hp1 others(32): Show HG00099.hp2 HG00642.hp1 HG00735.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp1 HG01358.hp2 HG01891.hp1 HG01891.hp2 HG02145.hp2 HG02165.hp2 HG02258.hp2 HG02300.hp2 HG02486.hp2 HG02615.hp1 HG02647.hp1 HG02723.hp2 HG02809.hp1 HG02922.hp1 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03486.hp1 HG03579.hp2 HG04228.hp2 NA19043.hp1 NA19074.hp1 NA19240.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0010	a0001c0001 a0001c0004 a0002c0002 others(3): Show a0001c0001 a0001c0004 a0002c0002 a0004c0012 a0006c0014 a0010c0019	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(13): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0032 a0001c0001t0064 a0001c0004t0023 a0001c0004t0031 a0002c0002t0004 a0002c0002t0021 a0002c0002t0049 a0004c0012t0009 a0006c0014t0004 a0010c0019t0052	a0001c0001t0001g0226 a0001c0001t0004g0198 a0001c0001t0004g0235 others(32): Show a0001c0001t0001g0226 a0001c0001t0004g0198 a0001c0001t0004g0235 a0001c0001t0004g0244 a0001c0001t0005g0178 a0001c0001t0005g0268 a0001c0001t0005g0270 a0001c0001t0005g0271 a0001c0001t0005g0272 a0001c0001t0007g0163 a0001c0001t0007g0164 a0001c0001t0007g0165 a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0173 a0001c0001t0011g0277 a0001c0001t0012g0016 a0001c0001t0012g0018 a0001c0001t0012g0023 a0001c0001t0032g0014 a0001c0001t0064g0276 a0001c0004t0023g0254 a0001c0004t0031g0279 a0002c0002t0004g0032 a0002c0002t0004g0053 a0002c0002t0004g0072 a0002c0002t0004g0106 a0002c0002t0004g0107 a0002c0002t0004g0117 a0002c0002t0021g0052 a0002c0002t0049g0054 a0004c0012t0009g0221 a0004c0012t0009g0242 a0006c0014t0004g0027 a0010c0019t0052g0055	35	296	0.1182	48	c.368 others(65): Show c.368-2831_368-2784dupGGCCCGGGTATGTAGTAAGTAAGTGGCC CGGGTATGTAGTAAGTAAGT		LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18						chr1	TogoVar
LRP8_chr1_53237364_53333070	53283529	T T	TTACTACA others(41): Show TTACTACATACCCGGGCCACTTACTTACTACATACCCGGGCCACTTACA	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0105 a0003c0005t0002g0105	1	296	0.0034	48	c.368 others(65): Show c.368-2815_368-2814insTGTAAGTGGCCCGGGTATGTAGTAAGTA AGTGGCCCGGGTATGTAGTA		LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18						chr1	TogoVar
LRP8_chr1_53237364_53333070	53283626	T T	TACTTACT others(41): Show TACTTACTACATACCCGGGCCACTTACTTACTTACTACATACCCGGGCC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02896.hp2 HG02897.hp2 others(2): Show HG02109.hp1 HG02896.hp2 HG02897.hp2 HG03516.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0065 a0001c0001t0005 a0001c0001t0065	a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0144 others(2): Show a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0144 a0001c0001t0005g0253 a0001c0001t0065g0283	5	296	0.0169	48	c.368 others(65): Show c.368-2912_368-2911insGGCCCGGGTATGTAGTAAGTAAGTAAGT GGCCCGGGTATGTAGTAAGT		LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18						chr1	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(41): Show ATATATATATATATATATATATATATATATATATATATATATATGTATG	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0133 a0002c0002t0001g0133	1	420	0.0024	48	c.-77 others(65): Show c.-77-9275_-77-9274insCATACATATATATATATATATATATATA TATATATATATATATATATA		LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3						chr10	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(41): Show ATATATATATATATATATATATATATATATATATATATATGTATGTATG	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02293.hp1 HG04199.hp1 HG02071.hp1 HG02293.hp1 HG04199.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0019 a0002c0002 a0001c0001 a0001c0019 a0002c0002	a0001c0001t0001 a0001c0019t0001 a0002c0002t0001 a0001c0001t0001 a0001c0019t0001 a0002c0002t0001	a0001c0001t0001g0127 a0001c0019t0001g0048 a0002c0002t0001g0240 a0001c0001t0001g0127 a0001c0019t0001g0048 a0002c0002t0001g0240	3	420	0.0071	48	c.-77 others(65): Show c.-77-9275_-77-9274insCATACATACATATATATATATATATATA TATATATATATATATATATA		LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3						chr10	TogoVar
LRRC3B_chr3_26617772_26715776	26671371	T T	TAGAGAGA others(41): Show TAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	370	0.0027	48	c.-16 others(69): Show c.-160-38141_-160-38140insGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGA		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(41): Show TATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	370	0.0027	48	c.-16 others(69): Show c.-160-38139_-160-38138insTATATATATATATATATATATATA TAGAGAGAGAGAGAGAGAGAGAGA		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671413	G G	GAGAGAGA others(41): Show GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAC	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0073 a0001c0002t0002g0073	1	370	0.0027	48	c.-16 others(69): Show c.-160-38099_-160-38098insGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGACA		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC4C_chr11_40109209_41464652	40696288	A A	ATATATAT others(41): Show ATATATATATATATATATATATATATACACACATATATATATATATGAG	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	48	0.0208	48	c.-40 others(69): Show c.-406-48011_-406-48010insCTCATATATATATATATGTGTGTA TATATATATATATATATATATATA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6						chr11	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCTTCTT others(41): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG04115.hp1 NA18953.hp2 NA19009.hp2 others(1): Show HG04115.hp1 NA18953.hp2 NA19009.hp2 NA19091.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0024 a0002c0002t0001g0094 a0002c0002t0001g0206 a0002c0002t0001g0024 a0002c0002t0001g0094 a0002c0002t0001g0206	4	402	0.0100	48	c.996 others(63): Show c.996+403_996+404insTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC TTCTTCTTCTTCTTCTTC		LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14					INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928404	C C	CTTCTTCT others(41): Show CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0182 a0003c0004t0002g0182	1	402	0.0025	48	c.996 others(63): Show c.996+403_996+404insTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC TTCTTCTTCCTCTTATTC		LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14					INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69898662	A A	ACTGCTGC others(41): Show ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02970.hp2 HG00738.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0046 a0001c0001t0013 a0001c0001t0046	a0001c0001t0013g0084 a0001c0001t0046g0078 a0001c0001t0013g0084 a0001c0001t0046g0078	2	108	0.0185	48	c.648 others(67): Show c.648-32816_648-32815insGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCT		LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26					INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRK1_chr15_100914357_101083257	100962821	A A	ACACATAT others(41): Show ACACATATATATATATATACATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0078 a0001c0003t0078	a0001c0003t0078g0325 a0001c0003t0078g0325	1	338	0.0030	48	c.98- others(65): Show c.98-10983_98-10982insCACATATATATATATATACATATATATA TATATATATATATATATTTT		LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33						chr15	TogoVar

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