view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SHOX_chrX_625791_656584 | 639247 | C | CAGAAT | intron_variant | MODIFIER | NA19077.hp1 | a0001 | a0001c0001 | a0001c0001t0198 | a0001c0001t0198g0018 | 1 | 220 | 0.0046 | 5 | c.487 others(22): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHOX_chrX_625791_656584 | 645390 | A | ATTTTT | 3_prime_UTR_variant | MODIFIER | NA18941.hp2 | a0001 | a0001c0001 | a0001c0001t0155 | a0001c0001t0155g0003 | 1 | 220 | 0.0046 | 5 | c.*78 others(14): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 788 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 650792 | T | TAAAAA | 3_prime_UTR_variant | MODIFIER | HG02886.hp2 NA18946.hp2 NA18953.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0062a0001c0001t0115others(1): Show | a0001c0001t0021g0004 a0001c0001t0062g0044 a0001c0001t0115g0195 others(1): Show |
4 | 220 | 0.0182 | 5 | c.*61 others(16): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 6184 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 651641 | G | GAAAAA | downstream_gene_variant | MODIFIER | HG02809.hp1 | a0001 | a0001c0001 | a0001c0001t0187 | a0001c0001t0187g0071 | 1 | 220 | 0.0046 | 5 | c.*70 others(16): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 58 | chrX | TogoVar | |||||||
SHOX_chrX_625791_656584 | 652339 | A | ATTTTT | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00597.hp1 HG00735.hp1 others(7): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0001c0001t0048a0001c0001t0055others(7): Show | a0001c0001t0001g0028 a0001c0001t0048g0032 a0001c0001t0055g0026 others(7): Show |
10 | 220 | 0.0455 | 5 | c.*77 others(16): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 756 | chrX | TogoVar | |||||||
SHPK_chr17_3603240_3641250 | 3614526 | A | AAAAAG | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp2 HG01243.hp2 others(39): Show |
a0001a0002a0010 | a0001c0001a0002c0002a0010c0011 | a0001c0001t0003a0002c0002t0003a0002c0002t0017others(2): Show | a0001c0001t0003g0007 a0001c0001t0003g0093 a0001c0001t0003g0094 others(31): Show |
42 | 382 | 0.1100 | 5 | c.102 others(22): Show |
SHPK | ENSG00000197417.9 | transcript | ENST00000225519.5 | protein_coding | 6/6 | chr17 | TogoVar | |||||||
SHPK_chr17_3603240_3641250 | 3631512 | C | CTTTTT | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(52): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0002a0004c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(14): Show | a0001c0001t0001g0035 a0001c0001t0001g0041 a0001c0001t0001g0053 others(51): Show |
55 | 382 | 0.1440 | 5 | c.169 others(22): Show |
SHPK | ENSG00000197417.9 | transcript | ENST00000225519.5 | protein_coding | 1/6 | chr17 | TogoVar | |||||||
SHPRH_chr6_145879807_145969358 | 145911698 | A | AGAAAG | intron_variant | MODIFIER | HG02135.hp2 HG02155.hp2 NA18963.hp1 others(3): Show |
a0004 | a0004c0006 | a0004c0006t0007 | a0004c0006t0007g0008 a0004c0006t0007g0045 a0004c0006t0007g0046 others(1): Show |
6 | 354 | 0.0170 | 5 | c.432 others(24): Show |
SHPRH | ENSG00000146414.17 | transcript | ENST00000275233.12 | protein_coding | 24/29 | chr6 | TogoVar | |||||||
SHPRH_chr6_145879807_145969358 | 145934473 | T | TAAATA | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00558.hp1 others(29): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0002 a0001c0001t0001g0018 a0001c0001t0001g0019 others(22): Show |
32 | 354 | 0.0904 | 5 | c.299 others(22): Show |
SHPRH | ENSG00000146414.17 | transcript | ENST00000275233.12 | protein_coding | 13/29 | chr6 | TogoVar | |||||||
SHQ1_chr3_72744277_72853445 | 72787756 | T | TGAGGA | intron_variant | MODIFIER | HG01884.hp2 HG02559.hp2 HG02630.hp2 others(4): Show |
a0002 | a0002c0002a0002c0008 | a0002c0002t0001a0002c0008t0001 | a0002c0002t0001g0198 a0002c0002t0001g0199 a0002c0002t0001g0200 others(4): Show |
7 | 222 | 0.0315 | 5 | c.118 others(24): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 10/10 | chr3 | TogoVar | |||||||
SHROOM1_chr5_132817141_132835647 | 132822351 | C | CTTTTT | 3_prime_UTR_variant | MODIFIER | HG03239.hp1 HG03486.hp2 HG03710.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0012a0002c0002t0012 | a0001c0001t0012g0062 a0002c0002t0012g0030 a0002c0002t0012g0038 others(1): Show |
6 | 396 | 0.0152 | 5 | c.*44 others(14): Show |
SHROOM1 | ENSG00000164403.15 | transcript | ENST00000378679.8 | protein_coding | 10/10 | 444 | chr5 | TogoVar | ||||||
SHROOM1_chr5_132817141_132835647 | 132827613 | T | TCAAAA | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00323.hp2 HG00438.hp1 others(133): Show |
a0001a0002a0004others(6): Show | a0001c0001a0001c0003a0002c0002others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0007 a0001c0001t0001g0099 a0001c0001t0001g0102 others(34): Show |
136 | 396 | 0.3434 | 5 | c.-50 others(19): Show |
SHROOM1 | ENSG00000164403.15 | transcript | ENST00000378679.8 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9783186 | A | AAAAAG | upstream_gene_variant | MODIFIER | HG02886.hp2 | a0010 | a0010c0055 | a0010c0055t0002 | a0010c0055t0002g0129 | 1 | 256 | 0.0039 | 5 | c.-33 others(16): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 3242 | chrX | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9786378 | C | CCCCGG | upstream_gene_variant | MODIFIER | HG00423.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0228 | 1 | 256 | 0.0039 | 5 | c.-16 others(14): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 50 | chrX | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9790704 | A | AATAGT | intron_variant | MODIFIER | NA19079.hp1 | a0003 | a0003c0009 | a0003c0009t0003 | a0003c0009t0003g0080 | 1 | 256 | 0.0039 | 5 | c.165 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9794348 | G | GTCTTC | intron_variant | MODIFIER | HG00099.hp1 NA18906.hp1 |
a0001a0003 | a0001c0001a0003c0008 | a0001c0001t0024a0003c0008t0004 | a0001c0001t0024g0219 a0003c0008t0004g0206 |
2 | 256 | 0.0078 | 5 | c.165 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9795117 | C | CTTTCT | intron_variant | MODIFIER | NA19067.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0172 | 1 | 256 | 0.0039 | 5 | c.165 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9799157 | C | CTTTTT | intron_variant | MODIFIER | HG02280.hp1 HG02622.hp2 HG03130.hp1 |
a0002a0024a0026 | a0002c0005a0024c0036a0026c0032 | a0002c0005t0005a0024c0036t0002a0026c0032t0032 | a0002c0005t0005g0118 a0024c0036t0002g0120 a0026c0032t0032g0012 |
3 | 256 | 0.0117 | 5 | c.165 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9823054 | C | CCTTCT | intron_variant | MODIFIER | HG00140.hp1 HG02738.hp1 HG03492.hp1 others(1): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0004others(1): Show | a0001c0001t0001a0002c0002t0002a0003c0004t0003others(1): Show | a0001c0001t0001g0256 a0002c0002t0002g0063 a0003c0004t0003g0175 others(1): Show |
4 | 256 | 0.0156 | 5 | c.165 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | chrX | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9823060 | C | CCTTCT | intron_variant | MODIFIER | HG02055.hp1 | a0020 | a0020c0062 | a0020c0062t0002 | a0020c0062t0002g0246 | 1 | 256 | 0.0039 | 5 | c.165 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | chrX | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9827223 | C | CTTTTT | intron_variant | MODIFIER | HG02109.hp1 HG02145.hp1 HG02451.hp1 others(2): Show |
a0003a0004a0021 | a0003c0004a0004c0015a0004c0023others(1): Show | a0003c0004t0004a0004c0015t0012a0004c0023t0002others(2): Show | a0003c0004t0004g0192 a0004c0015t0012g0173 a0004c0023t0002g0014 others(2): Show |
5 | 256 | 0.0195 | 5 | c.165 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9850831 | C | CAAAAA | intron_variant | MODIFIER | HG01884.hp2 HG02074.hp1 HG02280.hp2 others(5): Show |
a0001a0002a0017others(4): Show | a0001c0001a0002c0002a0002c0011others(5): Show | a0001c0001t0001a0002c0002t0002a0002c0011t0003others(5): Show | a0001c0001t0001g0047 a0002c0002t0002g0005 a0002c0011t0003g0123 others(5): Show |
8 | 256 | 0.0313 | 5 | c.166 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9855295 | T | TAAAAA | intron_variant | MODIFIER | HG00438.hp2 HG00621.hp1 HG00735.hp1 others(19): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0007others(8): Show | a0001c0001t0001a0001c0001t0018a0001c0001t0022others(11): Show | a0001c0001t0001g0065 a0001c0001t0001g0110 a0001c0001t0001g0236 others(19): Show |
22 | 256 | 0.0859 | 5 | c.166 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9875080 | C | CAAAAA | intron_variant | MODIFIER | HG02809.hp2 HG02970.hp2 |
a0001a0002 | a0001c0003a0002c0010 | a0001c0003t0001a0002c0010t0003 | a0001c0003t0001g0111 a0002c0010t0003g0227 |
2 | 256 | 0.0078 | 5 | c.317 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9884368 | C | CTTCTT | intron_variant | MODIFIER | HG00099.hp2 HG02258.hp1 NA20752.hp1 |
a0001a0002 | a0001c0003a0002c0005 | a0001c0003t0001a0001c0003t0019a0002c0005t0002 | a0001c0003t0001g0087 a0001c0003t0019g0085 a0002c0005t0002g0237 |
3 | 256 | 0.0117 | 5 | c.318 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9884368 | C | CTTTTT | intron_variant | MODIFIER | NA19030.hp2 | a0046 | a0046c0065 | a0046c0065t0004 | a0046c0065t0004g0122 | 1 | 256 | 0.0039 | 5 | c.318 others(22): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9903515 | T | TGGGTC | intron_variant | MODIFIER | NA19089.hp1 | a0005 | a0005c0060 | a0005c0060t0003 | a0005c0060t0003g0019 | 1 | 256 | 0.0039 | 5 | c.289 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9911936 | T | TCCTCC | intron_variant | MODIFIER | NA19060.hp1 | a0003 | a0003c0004 | a0003c0004t0007 | a0003c0004t0007g0153 | 1 | 256 | 0.0039 | 5 | c.289 others(26): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | chrX | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9919324 | C | CTTTTT | intron_variant | MODIFIER | HG01109.hp1 HG03209.hp1 NA20300.hp1 |
a0002a0003a0036 | a0002c0013a0003c0006a0036c0079 | a0002c0013t0002a0003c0006t0004a0036c0079t0003 | a0002c0013t0002g0191 a0003c0006t0004g0145 a0036c0079t0003g0174 |
3 | 256 | 0.0117 | 5 | c.289 others(26): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9930732 | A | AGTTTT | intron_variant | MODIFIER | HG02257.hp1 HG03195.hp2 HG03471.hp1 others(3): Show |
a0002a0003a0011others(1): Show | a0002c0005a0002c0010a0003c0008others(2): Show | a0002c0005t0003a0002c0010t0005a0003c0008t0003others(3): Show | a0002c0005t0003g0127 a0002c0010t0005g0241 a0003c0008t0003g0244 others(3): Show |
6 | 256 | 0.0234 | 5 | c.289 others(24): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76500781 | T | TTTTTC | intron_variant | MODIFIER | HG00423.hp2 HG00642.hp1 HG01175.hp1 others(48): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0015a0001c0017others(22): Show | a0001c0001t0002a0001c0001t0014a0001c0001t0016others(30): Show | a0001c0001t0002g0110 a0001c0001t0002g0161 a0001c0001t0002g0166 others(48): Show |
51 | 218 | 0.2339 | 5 | c.169 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76528544 | C | CTTTTT | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00423.hp1 others(23): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0003a0003c0002others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(15): Show | a0001c0001t0001g0174 a0001c0001t0002g0001 a0001c0001t0002g0009 others(23): Show |
26 | 218 | 0.1193 | 5 | c.169 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76544407 | C | CTTTTT | intron_variant | MODIFIER | HG00621.hp1 HG00642.hp2 HG02055.hp2 others(2): Show |
a0002a0003a0004others(1): Show | a0002c0003a0003c0002a0004c0008others(1): Show | a0002c0003t0001a0003c0002t0001a0004c0008t0001others(1): Show | a0002c0003t0001g0163 a0003c0002t0001g0098 a0004c0008t0001g0051 others(2): Show |
5 | 218 | 0.0229 | 5 | c.169 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76582192 | T | TAGAAA | intron_variant | MODIFIER | HG00423.hp2 HG00621.hp1 HG00621.hp2 others(59): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0015a0001c0017others(19): Show | a0001c0001t0002a0001c0001t0008a0001c0015t0009others(25): Show | a0001c0001t0002g0181 a0001c0001t0008g0198 a0001c0015t0009g0059 others(59): Show |
62 | 218 | 0.2844 | 5 | c.323 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76608528 | G | GGCATA | intron_variant | MODIFIER | HG00673.hp2 HG01255.hp1 HG01993.hp1 others(10): Show |
a0001a0003a0004others(2): Show | a0001c0001a0003c0002a0004c0004others(2): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0033others(5): Show | a0001c0001t0002g0018 a0001c0001t0002g0093 a0001c0001t0002g0112 others(10): Show |
13 | 218 | 0.0596 | 5 | c.323 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76608551 | A | ATAGCG | intron_variant | MODIFIER | HG02083.hp2 HG02258.hp2 HG02572.hp1 others(8): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0015a0001c0037others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0016others(7): Show | a0001c0001t0001g0052 a0001c0001t0002g0055 a0001c0001t0016g0193 others(8): Show |
11 | 218 | 0.0505 | 5 | c.323 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76631203 | C | CTTTTT | intron_variant | MODIFIER | HG00423.hp1 HG01891.hp1 HG02559.hp2 others(4): Show |
a0002a0003a0005others(2): Show | a0002c0003a0003c0002a0005c0011others(2): Show | a0002c0003t0001a0003c0002t0001a0005c0011t0002others(2): Show | a0002c0003t0001g0073 a0002c0003t0001g0168 a0002c0003t0001g0194 others(4): Show |
7 | 218 | 0.0321 | 5 | c.323 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76667966 | C | CAAAAA | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG01243.hp2 others(38): Show |
a0001a0002a0003others(10): Show | a0001c0001a0002c0003a0002c0044others(14): Show | a0001c0001t0002a0002c0003t0001a0002c0003t0002others(20): Show | a0001c0001t0002g0042 a0002c0003t0001g0002 a0002c0003t0001g0006 others(38): Show |
41 | 218 | 0.1881 | 5 | c.324 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76693370 | G | GTTTTT | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp1 HG02809.hp2 others(8): Show |
a0001a0003a0005others(1): Show | a0001c0001a0001c0019a0003c0002others(3): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0012others(6): Show | a0001c0001t0002g0087 a0001c0001t0002g0142 a0001c0001t0002g0173 others(8): Show |
11 | 218 | 0.0505 | 5 | c.324 others(24): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76726541 | T | TAAAAA | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00423.hp2 others(30): Show |
a0001a0004a0023others(2): Show | a0001c0001a0001c0017a0004c0022others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(8): Show | a0001c0001t0001g0052 a0001c0001t0002g0001 a0001c0001t0002g0009 others(30): Show |
33 | 218 | 0.1514 | 5 | c.456 others(22): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76737926 | G | GTGCCA | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00423.hp2 others(97): Show |
a0001a0004a0005others(12): Show | a0001c0001a0001c0015a0001c0017others(25): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(45): Show | a0001c0001t0001g0052 a0001c0001t0001g0174 a0001c0001t0002g0001 others(97): Show |
100 | 218 | 0.4587 | 5 | c.588 others(20): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM4_chrX_50581796_50819194 | 50611136 | C | CTTTTT | intron_variant | MODIFIER | HG01358.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0023 | 1 | 175 | 0.0057 | 5 | c.295 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 5/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50611144 | C | CTTTTT | intron_variant | MODIFIER | HG00642.hp1 HG00673.hp1 HG00735.hp1 others(28): Show |
a0002a0003a0004others(2): Show | a0002c0002a0002c0003a0002c0022others(4): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(7): Show | a0002c0002t0001g0009 a0002c0002t0001g0013 a0002c0002t0001g0027 others(28): Show |
31 | 175 | 0.1771 | 5 | c.295 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 5/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50611148 | T | TTTTTC | intron_variant | MODIFIER | HG01167.hp1 HG03098.hp1 |
a0004 | a0004c0005 | a0004c0005t0007a0004c0005t0023 | a0004c0005t0007g0012 a0004c0005t0023g0168 |
2 | 175 | 0.0114 | 5 | c.295 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 5/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50686320 | T | TCCCCG | intron_variant | MODIFIER | HG01256.hp1 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0097 | 1 | 175 | 0.0057 | 5 | c.269 others(22): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 2/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50694543 | A | ATTTTT | intron_variant | MODIFIER | HG00621.hp1 HG01069.hp1 NA18967.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0018a0001c0001t0022others(1): Show | a0001c0001t0001g0067 a0001c0001t0001g0092 a0001c0001t0018g0074 others(2): Show |
5 | 175 | 0.0286 | 5 | c.269 others(22): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 2/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50723421 | A | AGAGAG | intron_variant | MODIFIER | HG02300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0146 | 1 | 175 | 0.0057 | 5 | c.118 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50767772 | T | TAGTCC | intron_variant | MODIFIER | HG02647.hp1 HG03041.hp1 HG03225.hp1 others(2): Show |
a0003a0009 | a0003c0004a0003c0021a0009c0026 | a0003c0004t0006a0003c0021t0005a0009c0026t0040 | a0003c0004t0006g0124 a0003c0004t0006g0126 a0003c0004t0006g0127 others(2): Show |
5 | 175 | 0.0286 | 5 | c.117 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50791577 | C | CTTTTT | intron_variant | MODIFIER | NA20129.hp2 | a0020 | a0020c0016 | a0020c0016t0004 | a0020c0016t0004g0014 | 1 | 175 | 0.0057 | 5 | c.117 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50795081 | T | TATATC | intron_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0050 | 1 | 175 | 0.0057 | 5 | c.117 others(24): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar |